Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0007567

Physical Location & Seq

Genomic Coordinates Reverse (-)

6420430 .. 6423759

Gene Structure 3330 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00083820.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2196 bp

ATGGGTTGCATCAGCTCGAAGCAGGCGGCTCCGGGGTCTCCATGTATTGAGTATTCAGCGGCCCTGACCAAGAATGGCTCTGTTGTTCTCGAGCCTTCCGTGAGCAACAAGAAAAGCAAGAATACTACTCATCTTAATACGTCTCATTGTTCCGAATTGCGAAACAACGGTAGTAGTAAGAGAAGCAGCAATAGTTTTAACAAGAAGGATCAGACTGATCAGAATCAGAATGTTCAGGAGAAGGACAAGGACAAGGAGAAGCCGTCCGACGATCACAAGAACAAGGAGCTGAAGAAGTCCAAGAAGGAGGGTAATGGGAAAGCTGGTTTTAGCTTCAAGTTGGGTTTCTCTCATAGATCTTTGGAGAGTGAACAGGTCGCCGCCGGCTGGCCTTCTTGGCTCAGCGCCGCTGCCGGAGAAGCCATCTACGGTTGGGTGCCCCTCAAAGCTGACGCTTACGAAAAATTGGAGAAGATTGGGCAAGGAACATACAGCAGTGTATTCAGAGCACGTGAAGTTGAAACAGGGAGGATTCTTGCACTTAAGAAAGTGCGTTTTGACAACTTTCAACCAGAGAGTATTAGGTTTATGGCTCGCGAGATTATGATTCTTCGTAGGCTTGATCATCCTAACATCATGAAGCTGGAGGGGATAATAACATCTCGATCATCGAGTAGCATATACCTAGTGTTTGAGTACATGGAGCATGATCTGGCTGGACTAGTAGCTGCAAATGACATCAAATTCAGTGACGTGCAGATTAAATGCTATATGAGGCAGCTATTCTCTGCGGTCGAGCATTGTCATTTGAGAGGTATTATGCATCGAGACATCAAGGCATCGAATATATTGGTGAACAATGAAGGGATTTTGAAGTTGGCAGATTTTGGATTGGCAAATGTGGTAAACGCAAAAAGCAATCAACCACTAACAAGTCGGGTGGTGACCTTGTGGTATCGTCCTCCCGAGCTCTTGATGGGGGCAACAGAGTATGGAGTATCTGTGGATCTCTGGAGTGTGGGCTGTGTGTTTGCAGAACTCTATCTAGGGAAGCCTGTTCTCAAAGGAAGAACTGAGGTTGAACAATTGCACAAAATTTTCAAGCTTTGTGGTTCTCCACCTGAAGATTACTGGAAGAACTCAAAGCTTCCTCACGCAACAATGTTTAAACCTCAGTATTCTTATGAAAGTTCTCTTAGGGAAAGATGTAAGGAATTTCCAACCACATCGGTGGACTTGTTACAAACACTTCTTTCAGTAGAACCTTACAACCGCGGAACTGCCTCCTCTGCCCTTATGTCTGAGTATTTCAGAACAAAGCCTTACGCTTGCGATCCAGCAAAGTTGCCGAAGTATCCTCCCACCAAGGAAATGGATGCTAAAAGTCGTGAGGATGCACAGAAGAAAAAGCATGGTCCTCGAGCACGAGAGACAGCGGCCAAGAAACCAAGGAGATTCCGAAAGACTTTGCAAGAGACCAACTCTGCAAAGTTAGCACCAAAAGAGGATAGACAAGACGATAACAGTAGCCAATTATCTCGTAGAAATCATGGCGGTTACCCCCATATTCTAAGGCCAAAAGCAAGTCTTCTGCATAGAGAGTCTCAAACAGCGGCATTTGATACAGTTTCAGAGAACTACGAGTTGAATGCACCCGAAGGAGACAGCACATTCTCCTCTGCTGCAGGCACACGAGCAGGAGGTGGAAGCGGCTTTGCATGGGCTAAAAGGCGAAACGCAGAATTCAGTACTAAATCCGTGGTTTCAGATGGCTCAAAAAGCCAGTTCAGTGTGTTAGATACAACTTTCGCCAAGAGTGCATTTGACTTGTCGAAACCAGGGAATGATAATGCCAGGACAATCCGAAAGATGCGAACTTTTGATGGATCGGAACTTTTCTGTGCAGATGAAGACGATGTAGAAAACAATATGAATCACAAGTCAGTAGACAAACATGTTATCGAGTACTCGGGTCCATTACTATCCCAACATAGTAGAATCGATGAACACTTGCGAAGAAACGAGAGTCATCTTCGTCATGTGGCTCGCAGATCAAGGTTCGAAAGAGGTAAAAACCGTAAAATCCCCAATCTTGATCCCTTTACCGTGAAGAAGTTCTCAAGTACAATGCACATGTTCACTGATCACATTACTTCATATCCTATTGCAGAAGCAGAACCAGCACCCTCACGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051726 GO:0065007 GO:0071704 GO:0071944 GO:0097472 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase WRKY

Protein Analysis

731

Amino Acids

82.24

Weight (kDa)

9.41

Isoelectric Point (pI)

47.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	153 - 437	1.7e-65	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	155 - 366	1e-30	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007567)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01085 AT3G01085 AT3G01085 AT5G39420
fragaria_vesca	FvH4_6g47810 FvH4_6g47810
malus_domestica	MD09G1056500.v1.1 MD17G1054000.v1.1
prunus_persica	Prupe.3G262200_v2.0.a1 Prupe.3G262200_v2.0.a1
pyrus_communis	pycom111g04730
rosa_chinensis	RchiOBHm_Chr2g0167001
rosa_laevigata	RLG00000021688
rosa_multiflora	Rmu_co8508959.1_g000001
rosa_roxburghii	Rroxscaffold_2G00083820 Rroxscaffold_2G00083870
rosa_rugosa	Rorug02G0527400 Rorug02G0527500 Rorug02G0527600.1
rosa_samantha	Rh2AG594200 Rh2BG605700 Rh2CG576600 Rh2DG617200
rosa_wichuraiana	Rw2G049480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	436
AccI	GTMKAC	1 cut(s)	1947
AccII	CGCG	2 cut(s)	597, 1275
AclWI	GGATC	5 cut(s)	216, 1014, 1328, 1894, 2090
AcoI	YGGCCR	1 cut(s)	1437
AcsI	RAATTY	4 cut(s)	743, 1095, 1214, 1742
AcuI	CTGAAG	2 cut(s)	311, 1143
AcvI	CACGTG	1 cut(s)	512
AfaI	GTAC	4 cut(s)	698, 1750, 1967, 2125
AfiI	CCNNNNNNNGG	1 cut(s)	387
AflII	CTTAAG	1 cut(s)	542
AflIII	ACRYGT	2 cut(s)	1954, 2133
AgsI	TTSAA	7 cut(s)	337, 521, 569, 874, 1082, 1102, 1648
AhlI	ACTAGT	1 cut(s)	721
AjiI	CACGTC	1 cut(s)	754
AjnI	CCWGG	2 cut(s)	1837, 1853
AleI	CACNNNNGTG	1 cut(s)	1229
Alw21I	GWGCWC	3 cut(s)	511, 972, 1426
Alw26I	GTCTC	7 cut(s)	42, 147, 822, 1424, 1469, 1608, 1656
AlwI	GGATC	5 cut(s)	216, 1014, 1328, 1894, 2090
Ama87I	CYCGRG	4 cut(s)	89, 965, 1419, 1969
AoxI	GGCC	4 cut(s)	60, 389, 1437, 1574
ApeKI	GCWGC	5 cut(s)	186, 410, 728, 778, 1682
ApoI	RAATTY	4 cut(s)	743, 1095, 1214, 1742
Asp700I	GAANNNNTTC	1 cut(s)	2114
AspLEI	GCGC	1 cut(s)	407
AspS9I	GGNCC	3 cut(s)	61, 1415, 1973
AsuC2I	CCSGG	1 cut(s)	33
AsuHPI	GGTGA	2 cut(s)	865, 955
AsuII	TTCGAA	1 cut(s)	2061
AvaI	CYCGRG	4 cut(s)	89, 965, 1419, 1969
AvaII	GGWCC	2 cut(s)	1415, 1973
BaeGI	GKGCMC	1 cut(s)	441
BanI	GGYRCC	1 cut(s)	436
BanII	GRGCYC	1 cut(s)	972
BauI	CACGAG	2 cut(s)	1425, 1692
BbrPI	CACGTG	1 cut(s)	512
BbsI	GAAGAC	2 cut(s)	1580, 1917
Bbv12I	GWGCWC	3 cut(s)	511, 972, 1426
BbvI	GCAGC	5 cut(s)	198, 397, 715, 790, 1669
BccI	CCATC	4 cut(s)	431, 970, 1763, 1877
BceAI	ACGGC	1 cut(s)	247
BcgI	CGANNNNNNTGC	4 cut(s)	1400, 1434, 1631, 1665
BciT130I	CCWGG	2 cut(s)	1839, 1855
BciVI	GTATCC	1 cut(s)	1365
BclI	TGATCA	3 cut(s)	217, 622, 2143
BcnI	CCSGG	1 cut(s)	33
BcoDI	GTCTC	7 cut(s)	42, 147, 822, 1424, 1469, 1608, 1656
BcuI	ACTAGT	1 cut(s)	721
BfaI	CTAG	3 cut(s)	686, 722, 1046
BfmI	CTRYAG	1 cut(s)	1683
BfoI	RGCGCY	1 cut(s)	408
BfrI	CTTAAG	1 cut(s)	542
BfuI	GTATCC	1 cut(s)	1365
BglI	GCCNNNNNGGC	1 cut(s)	397
BglII	AGATCT	1 cut(s)	356
BlpI	GCTNAGC	1 cut(s)	401
BmcAI	AGTACT	2 cut(s)	1750, 1967
Bme1390I	CCNGG	3 cut(s)	33, 1839, 1855
Bme18I	GGWCC	2 cut(s)	1415, 1973
BmeT110I	CYCGRG	4 cut(s)	89, 965, 1419, 1969
BmgBI	CACGTC	1 cut(s)	754
BmgT120I	GGNCC	3 cut(s)	61, 1415, 1973
BmiI	GGNNCC	3 cut(s)	30, 438, 1974
BmrFI	CCNGG	3 cut(s)	33, 1839, 1855
BmsI	GCATC	6 cut(s)	18, 832, 848, 1366, 1384, 1860
BpiI	GAAGAC	2 cut(s)	1580, 1917
BplI	GAGNNNNNCTC	2 cut(s)	1466, 1498
BpmI	CTGGAG	2 cut(s)	665, 1033
Bpu1102I	GCTNAGC	1 cut(s)	401
Bpu14I	TTCGAA	1 cut(s)	2061
BpuEI	CTTGAG	1 cut(s)	2104
BpuMI	CCSGG	1 cut(s)	33
Bsa29I	ATCGAT	1 cut(s)	2001
BsaAI	YACGTR	1 cut(s)	512
BsaBI	GATNNNNATC	1 cut(s)	222
BsaI	GGTCTC	2 cut(s)	42, 1469
BsaJI	CCNNGG	6 cut(s)	32, 1273, 1365, 1448, 1758, 1838
BsaXI	ACNNNNNCTCC	4 cut(s)	248, 278, 987, 1017
Bsc4I	CCNNNNNNNGG	1 cut(s)	387
Bse118I	RCCGGY	1 cut(s)	383
Bse1I	ACTGG	2 cut(s)	1136, 1783
Bse8I	GATNNNNATC	1 cut(s)	222
BseBI	CCWGG	2 cut(s)	1839, 1855
BseCI	ATCGAT	1 cut(s)	2001
BseDI	CCNNGG	6 cut(s)	32, 1273, 1365, 1448, 1758, 1838
BseGI	GGATG	3 cut(s)	625, 1381, 1399
BseJI	GATNNNNATC	1 cut(s)	222
BseLI	CCNNNNNNNGG	1 cut(s)	387
BseMII	CTCAG	4 cut(s)	415, 1065, 1187, 1293
BseNI	ACTGG	2 cut(s)	1136, 1783
BseRI	GAGGAG	2 cut(s)	1276, 1666
BseSI	GKGCMC	1 cut(s)	441
BseXI	GCAGC	5 cut(s)	198, 397, 715, 790, 1669
BsgI	GTGCAG	2 cut(s)	776, 1923
Bsh1236I	CGCG	2 cut(s)	597, 1275
Bsh1285I	CGRYCG	1 cut(s)	795
BshFI	GGCC	4 cut(s)	62, 391, 1439, 1576
BshNI	GGYRCC	1 cut(s)	436
BshVI	ATCGAT	1 cut(s)	2001
BsiEI	CGRYCG	1 cut(s)	795
BsiHKAI	GWGCWC	3 cut(s)	511, 972, 1426
BsiHKCI	CYCGRG	4 cut(s)	89, 965, 1419, 1969
BsiSI	CCGG	3 cut(s)	32, 384, 414
BslI	CCNNNNNNNGG	1 cut(s)	387
BsmAI	GTCTC	7 cut(s)	42, 147, 822, 1424, 1469, 1608, 1656
BsmBI	CGTCTC	1 cut(s)	147
BsmI	GAATGC	1 cut(s)	1654
BsnI	GGCC	4 cut(s)	62, 391, 1439, 1576
Bso31I	GGTCTC	2 cut(s)	42, 1469
BsoBI	CYCGRG	4 cut(s)	89, 965, 1419, 1969
Bsp119I	TTCGAA	1 cut(s)	2061
Bsp1286I	GDGCHC	4 cut(s)	441, 511, 972, 1426
Bsp1720I	GCTNAGC	1 cut(s)	401
Bsp68I	TCGCGA	1 cut(s)	597
BspANI	GGCC	4 cut(s)	62, 391, 1439, 1576
BspCNI	CTCAG	4 cut(s)	414, 1066, 1186, 1294
BspDI	ATCGAT	1 cut(s)	2001
BspFNI	CGCG	2 cut(s)	597, 1275
BspHI	TCATGA	1 cut(s)	636
BspLI	GGNNCC	3 cut(s)	30, 438, 1974
BspMAI	CTGCAG	1 cut(s)	1687
BspPI	GGATC	5 cut(s)	216, 1014, 1328, 1894, 2090
BspT104I	TTCGAA	1 cut(s)	2061
BspT107I	GGYRCC	1 cut(s)	436
BspTI	CTTAAG	1 cut(s)	542
BspTNI	GGTCTC	2 cut(s)	42, 1469
BsrFI	RCCGGY	1 cut(s)	383
BsrI	ACTGG	2 cut(s)	1136, 1783
BssAI	RCCGGY	1 cut(s)	383
BssECI	CCNNGG	6 cut(s)	32, 1273, 1365, 1448, 1758, 1838
BssSI	CACGAG	2 cut(s)	1425, 1692
BssT1I	CCWWGG	2 cut(s)	1365, 1448
Bst2BI	CACGAG	2 cut(s)	1425, 1692
Bst2UI	CCWGG	2 cut(s)	1839, 1855
Bst4CI	ACNGT	7 cut(s)	170, 431, 1526, 1627, 2078, 2107, 2193
BstAFI	CTTAAG	1 cut(s)	542
BstBAI	YACGTR	1 cut(s)	512
BstBI	TTCGAA	1 cut(s)	2061
BstC8I	GCNNGC	7 cut(s)	24, 385, 389, 595, 1330, 1687, 2047
BstDEI	CTNAG	6 cut(s)	401, 1074, 1173, 1196, 1302, 1571
BstDSI	CCRYGG	2 cut(s)	1273, 1758
BstEII	GGTNACC	2 cut(s)	943, 1556
BstF5I	GGATG	3 cut(s)	625, 1381, 1399
BstFNI	CGCG	2 cut(s)	597, 1275
BstH2I	RGCGCY	1 cut(s)	408
BstHHI	GCGC	1 cut(s)	407
BstMAI	GTCTC	7 cut(s)	42, 147, 822, 1424, 1469, 1608, 1656
BstMCI	CGRYCG	1 cut(s)	795
BstMWI	GCNNNNNNNGC	7 cut(s)	397, 419, 1289, 1493, 1779, 1817, 2180
BstNI	CCWGG	2 cut(s)	1839, 1855
BstNSI	RCATGY	2 cut(s)	1958, 2137
BstPI	GGTNACC	2 cut(s)	943, 1556
BstSCI	CCNGG	3 cut(s)	31, 1837, 1853
BstSFI	CTRYAG	1 cut(s)	1683
BstSLI	GKGCMC	1 cut(s)	441
BstUI	CGCG	2 cut(s)	597, 1275
BstV1I	GCAGC	5 cut(s)	198, 397, 715, 790, 1669
BstV2I	GAAGAC	2 cut(s)	1580, 1917
BstX2I	RGATCY	2 cut(s)	356, 1006
BstXI	CCANNNNNNTGG	2 cut(s)	1231, 1372
BstYI	RGATCY	2 cut(s)	356, 1006
Bsu15I	ATCGAT	1 cut(s)	2001
BsuI	GTATCC	1 cut(s)	1365
BsuRI	GGCC	4 cut(s)	62, 391, 1439, 1576
BsuTUI	ATCGAT	1 cut(s)	2001
BtgI	CCRYGG	2 cut(s)	1273, 1758
BtrI	CACGTC	1 cut(s)	754
BtsCI	GGATG	3 cut(s)	625, 1381, 1399
BtsI	GCAGTG	1 cut(s)	502
BtsIMutI	CAGTG	4 cut(s)	502, 754, 1795, 2139
BtuMI	TCGCGA	1 cut(s)	597
Cac8I	GCNNGC	7 cut(s)	24, 385, 389, 595, 1330, 1687, 2047
CciI	TCATGA	1 cut(s)	636
CfoI	GCGC	1 cut(s)	407
Cfr10I	RCCGGY	1 cut(s)	383
Cfr13I	GGNCC	3 cut(s)	61, 1415, 1973
Cfr42I	CCGCGG	1 cut(s)	1276
ClaI	ATCGAT	1 cut(s)	2001
CseI	GACGC	1 cut(s)	461
Csp6I	GTAC	4 cut(s)	697, 1749, 1966, 2124
CspCI	CAANNNNNGTGG	4 cut(s)	921, 956, 1090, 1125
CviQI	GTAC	4 cut(s)	697, 1749, 1966, 2124
DdeI	CTNAG	6 cut(s)	401, 1074, 1173, 1196, 1302, 1571
DraI	TTTAAA	1 cut(s)	1168
EaeI	YGGCCR	1 cut(s)	1437
Ecl136II	GAGCTC	1 cut(s)	970
Eco130I	CCWWGG	2 cut(s)	1365, 1448
Eco24I	GRGCYC	1 cut(s)	972
Eco31I	GGTCTC	2 cut(s)	42, 1469
Eco47I	GGWCC	2 cut(s)	1415, 1973
Eco53kI	GAGCTC	1 cut(s)	970
Eco57I	CTGAAG	2 cut(s)	311, 1143
Eco72I	CACGTG	1 cut(s)	512
Eco88I	CYCGRG	4 cut(s)	89, 965, 1419, 1969
Eco91I	GGTNACC	2 cut(s)	943, 1556
EcoICRI	GAGCTC	1 cut(s)	970
EcoO65I	GGTNACC	2 cut(s)	943, 1556
EcoRI	GAATTC	1 cut(s)	1742
EcoRII	CCWGG	2 cut(s)	1837, 1853
EcoT14I	CCWWGG	2 cut(s)	1365, 1448
EcoT22I	ATGCAT	1 cut(s)	825
EcoT38I	GRGCYC	1 cut(s)	972
ErhI	CCWWGG	2 cut(s)	1365, 1448
Esp3I	CGTCTC	1 cut(s)	147
FalI	AAGNNNNNCTT	2 cut(s)	1572, 1604
FbaI	TGATCA	3 cut(s)	217, 622, 2143
FblI	GTMKAC	1 cut(s)	1947
FokI	GGATG	3 cut(s)	612, 1388, 1406
FriOI	GRGCYC	1 cut(s)	972
FspBI	CTAG	3 cut(s)	686, 722, 1046
GlaI	GCGC	1 cut(s)	406
GsuI	CTGGAG	2 cut(s)	665, 1033
HaeII	RGCGCY	1 cut(s)	408
HaeIII	GGCC	4 cut(s)	62, 391, 1439, 1576
HapII	CCGG	3 cut(s)	32, 384, 414
HgaI	GACGC	1 cut(s)	461
HhaI	GCGC	1 cut(s)	407
Hin6I	GCGC	1 cut(s)	405
HinP1I	GCGC	1 cut(s)	405
HindIII	AAGCTT	2 cut(s)	1103, 1145
HinfI	GANTC	8 cut(s)	223, 532, 607, 1455, 1601, 1933, 1998, 2026
HpaII	CCGG	3 cut(s)	32, 384, 414
HphI	GGTGA	2 cut(s)	865, 955
Hpy166II	GTNNAC	6 cut(s)	371, 856, 907, 1234, 1948, 2139
Hpy8I	GTNNAC	6 cut(s)	371, 856, 907, 1234, 1948, 2139
Hpy99I	CGWCG	1 cut(s)	272
HpyAV	CCTTC	7 cut(s)	105, 199, 235, 298, 402, 857, 1652
HpyCH4III	ACNGT	7 cut(s)	170, 431, 1526, 1627, 2078, 2107, 2193
HpyCH4IV	ACGT	3 cut(s)	140, 511, 753
HpyF10VI	GCNNNNNNNGC	7 cut(s)	397, 419, 1289, 1493, 1779, 1817, 2180
HpyF3I	CTNAG	6 cut(s)	401, 1074, 1173, 1196, 1302, 1571
HpySE526I	ACGT	3 cut(s)	140, 511, 753
HspAI	GCGC	1 cut(s)	405
KroI	GCCGGC	1 cut(s)	383
KroNI	GCCGGC	1 cut(s)	385
Ksp22I	TGATCA	3 cut(s)	217, 622, 2143
KspI	CCGCGG	1 cut(s)	1276
LmnI	GCTCC	3 cut(s)	34, 286, 703
Lsp1109I	GCAGC	5 cut(s)	198, 397, 715, 790, 1669
LweI	GCATC	6 cut(s)	18, 832, 848, 1366, 1384, 1860
MaeI	CTAG	3 cut(s)	686, 722, 1046
MaeII	ACGT	3 cut(s)	140, 511, 753
MaeIII	GTNAC	4 cut(s)	749, 943, 1239, 1556
MfeI	CAATTG	1 cut(s)	1085
MflI	RGATCY	2 cut(s)	356, 1006
MhlI	GDGCHC	4 cut(s)	441, 511, 972, 1426
MluCI	AATT	8 cut(s)	155, 464, 743, 1085, 1095, 1214, 1532, 1742
MlyI	GAGTC	2 cut(s)	1610, 2035
MmeI	TCCRAC	2 cut(s)	291, 1244
Mph1103I	ATGCAT	1 cut(s)	825
MroNI	GCCGGC	1 cut(s)	383
MroXI	GAANNNNTTC	1 cut(s)	2114
MseI	TTAA	5 cut(s)	135, 198, 543, 762, 1167
MslI	CAYNNNNRTG	1 cut(s)	1229
MspA1I	CMGCKG	5 cut(s)	59, 410, 1275, 1436, 1613
MspCI	CTTAAG	1 cut(s)	542
MspI	CCGG	3 cut(s)	32, 384, 414
MspR9I	CCNGG	3 cut(s)	33, 1839, 1855
MssI	GTTTAAAC	1 cut(s)	1168
MunI	CAATTG	1 cut(s)	1085
Mva1269I	GAATGC	1 cut(s)	1654
MvaI	CCWGG	2 cut(s)	1839, 1855
MvnI	CGCG	2 cut(s)	597, 1275
MwoI	GCNNNNNNNGC	7 cut(s)	397, 419, 1289, 1493, 1779, 1817, 2180
NaeI	GCCGGC	1 cut(s)	385
NciI	CCSGG	1 cut(s)	33
NgoMIV	GCCGGC	1 cut(s)	383
NlaIV	GGNNCC	3 cut(s)	30, 438, 1974
NmuCI	GTSAC	2 cut(s)	749, 943
NruI	TCGCGA	1 cut(s)	597
NsiI	ATGCAT	1 cut(s)	825
NspI	RCATGY	2 cut(s)	1958, 2137
NspV	TTCGAA	1 cut(s)	2061
OliI	CACNNNNGTG	1 cut(s)	1229
PaeR7I	CTCGAG	2 cut(s)	89, 1419
PagI	TCATGA	1 cut(s)	636
PciI	ACATGT	2 cut(s)	1954, 2133
PcsI	WCGNNNNNNNCGW	1 cut(s)	96
PctI	GAATGC	1 cut(s)	1654
PdiI	GCCGGC	1 cut(s)	385
PdmI	GAANNNNTTC	1 cut(s)	2114
PfeI	GAWTC	6 cut(s)	223, 532, 607, 1455, 1933, 1998
PleI	GAGTC	2 cut(s)	1609, 2034
PmaCI	CACGTG	1 cut(s)	512
PmeI	GTTTAAAC	1 cut(s)	1168
PmlI	CACGTG	1 cut(s)	512
PpsI	GAGTC	2 cut(s)	1609, 2034
Ppu21I	YACGTR	1 cut(s)	512
PscI	ACATGT	2 cut(s)	1954, 2133
Psp124BI	GAGCTC	1 cut(s)	972
Psp6I	CCWGG	2 cut(s)	1837, 1853
PspCI	CACGTG	1 cut(s)	512
PspEI	GGTNACC	2 cut(s)	943, 1556
PspGI	CCWGG	2 cut(s)	1837, 1853
PspN4I	GGNNCC	3 cut(s)	30, 438, 1974
PspPI	GGNCC	3 cut(s)	61, 1415, 1973
PspXI	VCTCGAGB	1 cut(s)	1419
PstI	CTGCAG	1 cut(s)	1687
PsuI	RGATCY	2 cut(s)	356, 1006
RruI	TCGCGA	1 cut(s)	597
RsaI	GTAC	4 cut(s)	698, 1750, 1967, 2125
RsaNI	GTAC	4 cut(s)	697, 1749, 1966, 2124
RseI	CAYNNNNRTG	1 cut(s)	1229
SacI	GAGCTC	1 cut(s)	972
SacII	CCGCGG	1 cut(s)	1276
SaqAI	TTAA	5 cut(s)	135, 198, 543, 762, 1167
Sau96I	GGNCC	3 cut(s)	61, 1415, 1973
ScaI	AGTACT	2 cut(s)	1750, 1967
SchI	GAGTC	2 cut(s)	1610, 2035
ScrFI	CCNGG	3 cut(s)	33, 1839, 1855
SduI	GDGCHC	4 cut(s)	441, 511, 972, 1426
SfaNI	GCATC	6 cut(s)	18, 832, 848, 1366, 1384, 1860
SfcI	CTRYAG	1 cut(s)	1683
Sfr274I	CTCGAG	2 cut(s)	89, 1419
Sfr303I	CCGCGG	1 cut(s)	1276
SfuI	TTCGAA	1 cut(s)	2061
SgrBI	CCGCGG	1 cut(s)	1276
SinI	GGWCC	2 cut(s)	1415, 1973
SlaI	CTCGAG	2 cut(s)	89, 1419
SmiMI	CAYNNNNRTG	1 cut(s)	1229
SmlI	CTYRAG	4 cut(s)	89, 542, 1419, 2119
SmoI	CTYRAG	4 cut(s)	89, 542, 1419, 2119
SpeI	ACTAGT	1 cut(s)	721
Sse9I	AATT	8 cut(s)	155, 464, 743, 1085, 1095, 1214, 1532, 1742
SspMI	CTAG	3 cut(s)	686, 722, 1046
SstI	GAGCTC	1 cut(s)	972
StyD4I	CCNGG	3 cut(s)	31, 1837, 1853
StyI	CCWWGG	2 cut(s)	1365, 1448
TaaI	ACNGT	7 cut(s)	170, 431, 1526, 1627, 2078, 2107, 2193
TaiI	ACGT	3 cut(s)	143, 514, 756
TasI	AATT	8 cut(s)	155, 464, 743, 1085, 1095, 1214, 1532, 1742
TatI	WGTACW	4 cut(s)	696, 1748, 1965, 2123
TauI	GCSGC	7 cut(s)	29, 62, 383, 410, 1439, 1616, 1713
TfiI	GAWTC	6 cut(s)	223, 532, 607, 1455, 1933, 1998
Tru1I	TTAA	5 cut(s)	135, 198, 543, 762, 1167
Tru9I	TTAA	5 cut(s)	135, 198, 543, 762, 1167
TscAI	CASTG	4 cut(s)	502, 754, 1795, 2146
TseFI	GTSAC	2 cut(s)	749, 943
TseI	GCWGC	5 cut(s)	186, 410, 728, 778, 1682
Tsp45I	GTSAC	2 cut(s)	749, 943
TspDTI	ATGAA	7 cut(s)	653, 876, 1200, 1923, 1946, 2019, 2145
TspGWI	ACGGA	2 cut(s)	88, 1747
TspRI	CASTG	4 cut(s)	502, 754, 1795, 2146
Vha464I	CTTAAG	1 cut(s)	542
VpaK11BI	GGWCC	2 cut(s)	1415, 1973
XapI	RAATTY	4 cut(s)	743, 1095, 1214, 1742
XceI	RCATGY	2 cut(s)	1958, 2137
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1369
XhoI	CTCGAG	2 cut(s)	89, 1419
XmiI	GTMKAC	1 cut(s)	1947
XmnI	GAANNNNTTC	1 cut(s)	2114
XspI	CTAG	3 cut(s)	686, 722, 1046
ZrmI	AGTACT	2 cut(s)	1750, 1967
Zsp2I	ATGCAT	1 cut(s)	825

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.