Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0007567

Physical Location & Seq

Genomic Coordinates Reverse (-)

65729604 .. 65732199

Gene Structure 2596 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0527500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1515 bp

ATGCATGCTCCACACTCTCTAGTTGGCAGGTTACTCCGAGCCAAATATTTTCCGGAGGTGGAATGGTTAAATGTAAGGGTGGGTAGAGGTGCATCTCTGGTGTGGCGGAGCTTGGTATGGGGGAAGGCAATATTAGAGCTTGGGATGAGGTGGAGGGTGGGAAATGGGGAGATGATCAATCTGAGAGCAGATAAATGGCTTCCTCAACCAACTACGTTCAAGGTGATTTCTCCAATTAGTATGCCCAGGCACTATAATGTTTCTGATCTTATTAATTCTAATCATGAATGGAAGGTGGATGTCATTTATAGTCAGTTCCTTGAGTTCGAGGCAAAAGTCATTCTATCTATCCCGCTGCCTAAGAATGGAGGCATTGATCGTCTAGTCTGGCATTATAACAAAAATGGTAGATACTCGGTGAAGTCTGGTTATTGGGTTGCTGCTCAAGACAGGTTAAAGAGAGAGGGATTGGACATGTCAGGAAGTGATTCTGGTCGCACTACTAAAGGGTGGAAGTTGTTGTGGGGTTTAAAGCTCCCTAACAAGATTAAGGTCTTTTTATGGAGGGCTTGTAATAATTTCCTCCCGTGTGCAGCTAATTTGAAGAAGCGGAGAGTGTGTAGAGATGGGTGGTGTGAAGGTTGTGGTTGTAGCGAGGAGACAGTACTTCATGCATTATGGGAGTGTTCATTTGCACGTAAGGCCTGGAGGCACACCTTCTTGGTTGATGTTATTAAAGTGTGGAAAGAAAGCAACTTCTTTGATCTTTTTTTGCATGTAGCTACAGTGGCTAGGGAGAATGACCTTGAGTGGTTTGGGGTGGTGGCGTGGCAAATTTGGCATGAGCGCAATAAGAGATCCCATAGCCAGCAAGTATTGGGTAGTGAGGAGGTAATTGTGAGAGCTGCTGCGTGGTGGGATTTCTATGGTAATTATGGCAATAGGGATGGTAATGGTGAGATGGGTAGGGGTAACATGTTGGGAGAAGATGGGATGCATGACATGGGGTTGGTTGGGCAGCGACAAAGGAGATGGGTGAAACCAAGTGGGGGAGTCATCAAACTTAATATCGACGGGGCGCTGGAGGTAACCAAAGGGGTTTTTGGTACGGGAGCAGTTTGCAGGGATGAGAATGGTACTTGTATTGGGGTCCTGGCTGTCCCAATGGTGGGTTTTGTGAGTCCACAAACATGTGAGTTTCTAGCTCTGGTCAATGGATTGCATTTCTGTCTACAAGCGGGGTTTACTAGATTGGAAATAGATGGTGATGCTCAGAACATTTTCCAGGCTTTAAACTCTGATCAGGAAGACCTCAGTTCAGATGGTGCACTAGTTGATGAAGCCAAGGTACTTTTAAGTTCTTTTCAGTTTTGTAGTTGGGGGTACATCCCAAGAGAGTGTAATAATGCTGCTCATTGTGTGGCAAAAGTCGCGTTATCTCTACCTTTCCCTACTTATTGGTGGAGGATGGCGCCAGATTGGCTTATTCCAATTCTAGTTGATGAGTCTTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051726 GO:0065007 GO:0071704 GO:0071944 GO:0097472 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase WRKY

Protein Analysis

504

Amino Acids

57.23

Weight (kDa)

8.57

Isoelectric Point (pI)

36.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RVT	PF13966	166 - 236	2.9e-13	zinc-binding in reverse transcriptase
RVT_3	PF13456	356 - 477	1.9e-25	Reverse transcriptase-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007567)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01085 AT3G01085 AT3G01085 AT5G39420
fragaria_vesca	FvH4_6g47810 FvH4_6g47810
malus_domestica	MD09G1056500.v1.1 MD17G1054000.v1.1
prunus_persica	Prupe.3G262200_v2.0.a1 Prupe.3G262200_v2.0.a1
pyrus_communis	pycom111g04730
rosa_chinensis	RchiOBHm_Chr2g0167001
rosa_laevigata	RLG00000021688
rosa_multiflora	Rmu_co8508959.1_g000001
rosa_roxburghii	Rroxscaffold_2G00083820 Rroxscaffold_2G00083870
rosa_rugosa	Rorug02G0527400 Rorug02G0527500 Rorug02G0527600.1
rosa_samantha	Rh2AG594200 Rh2BG605700 Rh2CG576600 Rh2DG617200
rosa_wichuraiana	Rw2G049480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	396
Acc36I	ACCTGC	1 cut(s)	18
AccB1I	GGYRCC	1 cut(s)	1471
AccI	GTMKAC	1 cut(s)	1231
AccII	CGCG	1 cut(s)	1433
AccIII	TCCGGA	1 cut(s)	52
AciI	CCGC	4 cut(s)	106, 353, 610, 1238
AclWI	GGATC	1 cut(s)	852
AcsI	RAATTY	1 cut(s)	834
AcyI	GRCGYC	1 cut(s)	1472
AfaI	GTAC	5 cut(s)	666, 1108, 1138, 1350, 1385
AfiI	CCNNNNNNNGG	4 cut(s)	365, 1049, 1168, 1169
AflIII	ACRYGT	3 cut(s)	474, 975, 1190
AgsI	TTSAA	2 cut(s)	220, 604
AhlI	ACTAGT	1 cut(s)	1330
AjnI	CCWGG	4 cut(s)	245, 704, 1152, 1284
AluBI	AGCT	7 cut(s)	111, 139, 535, 596, 782, 905, 1205
AluI	AGCT	7 cut(s)	111, 139, 535, 596, 782, 905, 1205
Alw21I	GWGCWC	1 cut(s)	1330
Alw26I	GTCTC	1 cut(s)	653
Alw44I	GTGCAC	1 cut(s)	1326
AlwI	GGATC	1 cut(s)	852
Aor13HI	TCCGGA	1 cut(s)	52
AoxI	GGCC	1 cut(s)	702
ApaLI	GTGCAC	1 cut(s)	1326
ApeKI	GCWGC	7 cut(s)	355, 440, 593, 905, 908, 1018, 1409
ApoI	RAATTY	1 cut(s)	834
AseI	ATTAAT	1 cut(s)	273
Asp700I	GAANNNNTTC	2 cut(s)	487, 1280
AspLEI	GCGC	3 cut(s)	849, 1081, 1474
AspS9I	GGNCC	1 cut(s)	1150
AsuHPI	GGTGA	5 cut(s)	235, 430, 968, 1048, 1277
AvaII	GGWCC	1 cut(s)	1150
BaeGI	GKGCMC	1 cut(s)	1330
BanI	GGYRCC	1 cut(s)	1471
BarI	GAAGNNNNNNTAC	2 cut(s)	1332, 1364
BbsI	GAAGAC	1 cut(s)	1314
Bbv12I	GWGCWC	1 cut(s)	1330
BbvI	GCAGC	7 cut(s)	342, 427, 605, 892, 895, 1030, 1396
BccI	CCATC	8 cut(s)	620, 941, 955, 983, 1026, 1256, 1316, 1462
BciT130I	CCWGG	4 cut(s)	247, 706, 1154, 1286
BclI	TGATCA	2 cut(s)	174, 1300
BcoDI	GTCTC	1 cut(s)	653
BcuI	ACTAGT	1 cut(s)	1330
BfaI	CTAG	7 cut(s)	20, 383, 792, 1202, 1248, 1331, 1496
BfmI	CTRYAG	1 cut(s)	783
BfoI	RGCGCY	2 cut(s)	1082, 1475
BfuAI	ACCTGC	1 cut(s)	18
BglI	GCCNNNNNGGC	1 cut(s)	1480
BisI	GCNGC	7 cut(s)	356, 441, 594, 906, 909, 1019, 1410
BlsI	GCNGC	7 cut(s)	357, 442, 595, 907, 910, 1020, 1411
BmcAI	AGTACT	1 cut(s)	666
Bme1390I	CCNGG	4 cut(s)	247, 706, 1154, 1286
Bme18I	GGWCC	1 cut(s)	1150
BmgT120I	GGNCC	1 cut(s)	1150
BmiI	GGNNCC	2 cut(s)	1151, 1473
BmrFI	CCNGG	4 cut(s)	247, 706, 1154, 1286
BmsI	GCATC	3 cut(s)	101, 984, 1258
BpiI	GAAGAC	1 cut(s)	1314
BpmI	CTGGAG	2 cut(s)	727, 1103
BpuEI	CTTGAG	3 cut(s)	341, 429, 827
BsaAI	YACGTR	1 cut(s)	698
BsaHI	GRCGYC	1 cut(s)	1472
BsaJI	CCNNGG	2 cut(s)	245, 1344
BsaWI	WCCGGW	1 cut(s)	52
BsaXI	ACNNNNNCTCC	4 cut(s)	556, 586, 604, 634
Bsc4I	CCNNNNNNNGG	4 cut(s)	365, 1049, 1168, 1169
BseAI	TCCGGA	1 cut(s)	52
BseBI	CCWGG	4 cut(s)	247, 706, 1154, 1286
BseDI	CCNNGG	2 cut(s)	245, 1344
BseGI	GGATG	7 cut(s)	150, 304, 952, 999, 1132, 1386, 1473
BseLI	CCNNNNNNNGG	4 cut(s)	365, 1049, 1168, 1169
BseMII	CTCAG	3 cut(s)	173, 1286, 1327
BseRI	GAGGAG	2 cut(s)	671, 902
BseSI	GKGCMC	1 cut(s)	1330
BseXI	GCAGC	7 cut(s)	342, 427, 605, 892, 895, 1030, 1396
BsgI	GTGCAG	1 cut(s)	612
Bsh1236I	CGCG	1 cut(s)	1433
BshFI	GGCC	1 cut(s)	704
BshNI	GGYRCC	1 cut(s)	1471
BsiHKAI	GWGCWC	1 cut(s)	1330
BsiSI	CCGG	1 cut(s)	53
BslFI	GGGAC	1 cut(s)	1145
BslI	CCNNNNNNNGG	4 cut(s)	365, 1049, 1168, 1169
BsmAI	GTCTC	1 cut(s)	653
BsmFI	GGGAC	1 cut(s)	1145
BsnI	GGCC	1 cut(s)	704
Bsp1286I	GDGCHC	1 cut(s)	1330
Bsp13I	TCCGGA	1 cut(s)	52
Bsp143I	GATC	6 cut(s)	174, 265, 376, 763, 857, 1300
BspACI	CCGC	4 cut(s)	106, 353, 610, 1238
BspANI	GGCC	1 cut(s)	704
BspCNI	CTCAG	3 cut(s)	174, 1285, 1326
BspEI	TCCGGA	1 cut(s)	52
BspFNI	CGCG	1 cut(s)	1433
BspHI	TCATGA	1 cut(s)	283
BspLI	GGNNCC	2 cut(s)	1151, 1473
BspMI	ACCTGC	1 cut(s)	18
BspPI	GGATC	1 cut(s)	852
BspT107I	GGYRCC	1 cut(s)	1471
BssECI	CCNNGG	2 cut(s)	245, 1344
BssMI	GATC	6 cut(s)	174, 265, 376, 763, 857, 1300
BssNI	GRCGYC	1 cut(s)	1472
BssT1I	CCWWGG	1 cut(s)	1344
Bst2UI	CCWGG	4 cut(s)	247, 706, 1154, 1286
Bst4CI	ACNGT	2 cut(s)	664, 787
BstACI	GRCGYC	1 cut(s)	1472
BstBAI	YACGTR	1 cut(s)	698
BstC8I	GCNNGC	2 cut(s)	6, 869
BstDEI	CTNAG	4 cut(s)	182, 360, 1272, 1313
BstEII	GGTNACC	1 cut(s)	1087
BstF5I	GGATG	7 cut(s)	150, 304, 952, 999, 1132, 1386, 1473
BstFNI	CGCG	1 cut(s)	1433
BstH2I	RGCGCY	2 cut(s)	1082, 1475
BstHHI	GCGC	3 cut(s)	849, 1081, 1474
BstKTI	GATC	6 cut(s)	177, 268, 379, 766, 860, 1303
BstMAI	GTCTC	1 cut(s)	653
BstMBI	GATC	6 cut(s)	174, 265, 376, 763, 857, 1300
BstMWI	GCNNNNNNNGC	5 cut(s)	701, 788, 838, 1430, 1480
BstNI	CCWGG	4 cut(s)	247, 706, 1154, 1286
BstNSI	RCATGY	5 cut(s)	8, 478, 779, 979, 1194
BstPI	GGTNACC	1 cut(s)	1087
BstSCI	CCNGG	4 cut(s)	245, 704, 1152, 1284
BstSFI	CTRYAG	1 cut(s)	783
BstSLI	GKGCMC	1 cut(s)	1330
BstUI	CGCG	1 cut(s)	1433
BstV1I	GCAGC	7 cut(s)	342, 427, 605, 892, 895, 1030, 1396
BstV2I	GAAGAC	1 cut(s)	1314
BstX2I	RGATCY	1 cut(s)	857
BstYI	RGATCY	1 cut(s)	857
BsuRI	GGCC	1 cut(s)	704
BtsCI	GGATG	7 cut(s)	150, 304, 952, 999, 1132, 1386, 1473
BtsIMutI	CAGTG	1 cut(s)	792
BveI	ACCTGC	1 cut(s)	18
Cac8I	GCNNGC	2 cut(s)	6, 869
CciI	TCATGA	1 cut(s)	283
CfoI	GCGC	3 cut(s)	849, 1081, 1474
Cfr13I	GGNCC	1 cut(s)	1150
Csp6I	GTAC	5 cut(s)	665, 1107, 1137, 1349, 1384
CviQI	GTAC	5 cut(s)	665, 1107, 1137, 1349, 1384
DdeI	CTNAG	4 cut(s)	182, 360, 1272, 1313
DinI	GGCGCC	1 cut(s)	1473
DpnI	GATC	6 cut(s)	176, 267, 378, 765, 859, 1302
DpnII	GATC	6 cut(s)	174, 265, 376, 763, 857, 1300
DraI	TTTAAA	2 cut(s)	531, 1293
EciI	GGCGGA	1 cut(s)	121
Eco130I	CCWWGG	1 cut(s)	1344
Eco147I	AGGCCT	1 cut(s)	704
Eco47I	GGWCC	1 cut(s)	1150
Eco91I	GGTNACC	1 cut(s)	1087
EcoO109I	RGGNCCY	1 cut(s)	1150
EcoO65I	GGTNACC	1 cut(s)	1087
EcoRII	CCWGG	4 cut(s)	245, 704, 1152, 1284
EcoT14I	CCWWGG	1 cut(s)	1344
EcoT22I	ATGCAT	3 cut(s)	6, 676, 999
EgeI	GGCGCC	1 cut(s)	1473
EheI	GGCGCC	1 cut(s)	1473
ErhI	CCWWGG	1 cut(s)	1344
FaqI	GGGAC	1 cut(s)	1145
FauI	CCCGC	2 cut(s)	360, 1231
FbaI	TGATCA	2 cut(s)	174, 1300
FblI	GTMKAC	1 cut(s)	1231
Fnu4HI	GCNGC	7 cut(s)	356, 441, 594, 906, 909, 1019, 1410
FokI	GGATG	7 cut(s)	157, 311, 959, 1006, 1139, 1373, 1480
Fsp4HI	GCNGC	7 cut(s)	356, 441, 594, 906, 909, 1019, 1410
FspBI	CTAG	7 cut(s)	20, 383, 792, 1202, 1248, 1331, 1496
GlaI	GCGC	3 cut(s)	848, 1080, 1473
GluI	GCNGC	7 cut(s)	356, 441, 594, 906, 909, 1019, 1410
GsuI	CTGGAG	2 cut(s)	727, 1103
HaeII	RGCGCY	2 cut(s)	1082, 1475
HaeIII	GGCC	1 cut(s)	704
HapII	CCGG	1 cut(s)	53
HhaI	GCGC	3 cut(s)	849, 1081, 1474
Hin1I	GRCGYC	1 cut(s)	1472
Hin6I	GCGC	3 cut(s)	847, 1079, 1472
HinP1I	GCGC	3 cut(s)	847, 1079, 1472
HinfI	GANTC	4 cut(s)	488, 1053, 1180, 1505
HpaII	CCGG	1 cut(s)	53
HphI	GGTGA	5 cut(s)	235, 430, 968, 1048, 1277
Hpy166II	GTNNAC	4 cut(s)	1184, 1232, 1245, 1328
Hpy188I	TCNGA	6 cut(s)	38, 183, 265, 1275, 1300, 1321
Hpy188III	TCNNGA	5 cut(s)	53, 284, 446, 480, 1304
Hpy8I	GTNNAC	4 cut(s)	1184, 1232, 1245, 1328
Hpy99I	CGWCG	1 cut(s)	1076
HpyAV	CCTTC	4 cut(s)	118, 286, 632, 727
HpyCH4III	ACNGT	2 cut(s)	664, 787
HpyCH4IV	ACGT	2 cut(s)	215, 697
HpyF10VI	GCNNNNNNNGC	5 cut(s)	701, 788, 838, 1430, 1480
HpyF3I	CTNAG	4 cut(s)	182, 360, 1272, 1313
HpySE526I	ACGT	2 cut(s)	215, 697
Hsp92I	GRCGYC	1 cut(s)	1472
HspAI	GCGC	3 cut(s)	847, 1079, 1472
KasI	GGCGCC	1 cut(s)	1471
Kpn2I	TCCGGA	1 cut(s)	52
Ksp22I	TGATCA	2 cut(s)	174, 1300
Kzo9I	GATC	6 cut(s)	174, 265, 376, 763, 857, 1300
LmnI	GCTCC	4 cut(s)	13, 108, 540, 1112
Lsp1109I	GCAGC	7 cut(s)	342, 427, 605, 892, 895, 1030, 1396
LweI	GCATC	3 cut(s)	101, 984, 1258
MaeI	CTAG	7 cut(s)	20, 383, 792, 1202, 1248, 1331, 1496
MaeII	ACGT	2 cut(s)	215, 697
MaeIII	GTNAC	3 cut(s)	30, 971, 1087
MalI	GATC	6 cut(s)	176, 267, 378, 765, 859, 1302
MboI	GATC	6 cut(s)	174, 265, 376, 763, 857, 1300
MboII	GAAGA	3 cut(s)	616, 998, 1319
MflI	RGATCY	1 cut(s)	857
MhlI	GDGCHC	1 cut(s)	1330
MluCI	AATT	8 cut(s)	234, 274, 577, 598, 834, 894, 931, 1491
Mly113I	GGCGCC	1 cut(s)	1472
MlyI	GAGTC	3 cut(s)	1062, 1189, 1514
Mph1103I	ATGCAT	3 cut(s)	6, 676, 999
MroI	TCCGGA	1 cut(s)	52
MroXI	GAANNNNTTC	2 cut(s)	487, 1280
MseI	TTAA	9 cut(s)	68, 273, 455, 530, 549, 735, 1065, 1292, 1355
MslI	CAYNNNNRTG	2 cut(s)	255, 1189
MspA1I	CMGCKG	1 cut(s)	355
MspI	CCGG	1 cut(s)	53
MspR9I	CCNGG	4 cut(s)	247, 706, 1154, 1286
MvaI	CCWGG	4 cut(s)	247, 706, 1154, 1286
MvnI	CGCG	1 cut(s)	1433
MwoI	GCNNNNNNNGC	5 cut(s)	701, 788, 838, 1430, 1480
NarI	GGCGCC	1 cut(s)	1472
NdeII	GATC	6 cut(s)	174, 265, 376, 763, 857, 1300
NlaIV	GGNNCC	2 cut(s)	1151, 1473
NsiI	ATGCAT	3 cut(s)	6, 676, 999
NspI	RCATGY	5 cut(s)	8, 478, 779, 979, 1194
PaeI	GCATGC	1 cut(s)	8
PagI	TCATGA	1 cut(s)	283
PceI	AGGCCT	1 cut(s)	704
PciI	ACATGT	3 cut(s)	474, 975, 1190
PdmI	GAANNNNTTC	2 cut(s)	487, 1280
PfeI	GAWTC	1 cut(s)	488
PkrI	GCNGC	7 cut(s)	357, 442, 595, 907, 910, 1020, 1411
PleI	GAGTC	3 cut(s)	1061, 1188, 1513
PluTI	GGCGCC	1 cut(s)	1475
PpsI	GAGTC	3 cut(s)	1061, 1188, 1513
Ppu21I	YACGTR	1 cut(s)	698
PpuMI	RGGWCCY	1 cut(s)	1150
PscI	ACATGT	3 cut(s)	474, 975, 1190
PshBI	ATTAAT	1 cut(s)	273
PsiI	TTATAA	1 cut(s)	396
Psp5II	RGGWCCY	1 cut(s)	1150
Psp6I	CCWGG	4 cut(s)	245, 704, 1152, 1284
PspEI	GGTNACC	1 cut(s)	1087
PspGI	CCWGG	4 cut(s)	245, 704, 1152, 1284
PspN4I	GGNNCC	2 cut(s)	1151, 1473
PspPI	GGNCC	1 cut(s)	1150
PspPPI	RGGWCCY	1 cut(s)	1150
PsuI	RGATCY	1 cut(s)	857
RsaI	GTAC	5 cut(s)	666, 1108, 1138, 1350, 1385
RsaNI	GTAC	5 cut(s)	665, 1107, 1137, 1349, 1384
RseI	CAYNNNNRTG	2 cut(s)	255, 1189
SaqAI	TTAA	9 cut(s)	68, 273, 455, 530, 549, 735, 1065, 1292, 1355
SatI	GCNGC	7 cut(s)	356, 441, 594, 906, 909, 1019, 1410
Sau3AI	GATC	6 cut(s)	174, 265, 376, 763, 857, 1300
Sau96I	GGNCC	1 cut(s)	1150
ScaI	AGTACT	1 cut(s)	666
SchI	GAGTC	3 cut(s)	1062, 1189, 1514
ScrFI	CCNGG	4 cut(s)	247, 706, 1154, 1286
SduI	GDGCHC	1 cut(s)	1330
SfaNI	GCATC	3 cut(s)	101, 984, 1258
SfcI	CTRYAG	1 cut(s)	783
SfoI	GGCGCC	1 cut(s)	1473
SinI	GGWCC	1 cut(s)	1150
SmiMI	CAYNNNNRTG	2 cut(s)	255, 1189
SmlI	CTYRAG	3 cut(s)	320, 444, 806
SmoI	CTYRAG	3 cut(s)	320, 444, 806
SpeI	ACTAGT	1 cut(s)	1330
SphI	GCATGC	1 cut(s)	8
Sse9I	AATT	8 cut(s)	234, 274, 577, 598, 834, 894, 931, 1491
SseBI	AGGCCT	1 cut(s)	704
SsiI	CCGC	4 cut(s)	106, 353, 610, 1238
SspDI	GGCGCC	1 cut(s)	1471
SspI	AATATT	2 cut(s)	47, 132
SspMI	CTAG	7 cut(s)	20, 383, 792, 1202, 1248, 1331, 1496
StuI	AGGCCT	1 cut(s)	704
StyD4I	CCNGG	4 cut(s)	245, 704, 1152, 1284
StyI	CCWWGG	1 cut(s)	1344
TaaI	ACNGT	2 cut(s)	664, 787
TaiI	ACGT	2 cut(s)	218, 700
TaqI	TCGA	2 cut(s)	327, 1071
TasI	AATT	8 cut(s)	234, 274, 577, 598, 834, 894, 931, 1491
TatI	WGTACW	1 cut(s)	664
TfiI	GAWTC	1 cut(s)	488
Tru1I	TTAA	9 cut(s)	68, 273, 455, 530, 549, 735, 1065, 1292, 1355
Tru9I	TTAA	9 cut(s)	68, 273, 455, 530, 549, 735, 1065, 1292, 1355
TscAI	CASTG	1 cut(s)	792
TseI	GCWGC	7 cut(s)	355, 440, 593, 905, 908, 1018, 1409
TspDTI	ATGAA	4 cut(s)	300, 659, 678, 1353
TspRI	CASTG	1 cut(s)	792
VneI	GTGCAC	1 cut(s)	1326
VpaK11BI	GGWCC	1 cut(s)	1150
VspI	ATTAAT	1 cut(s)	273
XapI	RAATTY	1 cut(s)	834
XceI	RCATGY	5 cut(s)	8, 478, 779, 979, 1194
XmiI	GTMKAC	1 cut(s)	1231
XmnI	GAANNNNTTC	2 cut(s)	487, 1280
XspI	CTAG	7 cut(s)	20, 383, 792, 1202, 1248, 1331, 1496
ZrmI	AGTACT	1 cut(s)	666
Zsp2I	ATGCAT	3 cut(s)	6, 676, 999

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.