Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0007567

Physical Location & Seq

Genomic Coordinates Forward (+)

84765554 .. 84769415

Gene Structure 3862 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG617200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2103 bp

ATGGGTTGCATCAGCTCGAAGCAGGCGGCTCCGGGGTCTCCATGTATTGAGTATTCAGCGGCCCTGACCAAGAATGGCTCTGTTGTTCTCGAGCCTTCCGTGAGCAACAAGAAAAACAAGAATACTACTCATCTTAATACGTCTCATTCTTCCGAATTGCGAAACAACGGTAGTAGTAAGAGAAGCAGCAATAGTTTTAACAAGAAGGATCAGACTGATCAGAATCAGAATGTTCAGGACAAGGACAAGGACAAGGAGAAGCCGTCCGACGATCACAAGAACAAGGAGCTGAAGAAGTCCAAGAAGGAGGGTAATGGGAAAGCTGGTTTTAGCTTCAAGTTGGGTTTCTCTCATAGATCTTTGGAGAGTGAACAGGTCGCCGCCGGCTGGCCTTCTTGGCTCAGCGCCGCTGCCGGAGAAGCCATCTACTGTTGGGTGCCCCTCAAAGCTGACGCTTACGAAAAATTGGAGAAGATTGGGCAAGGAACATACAGCAGTGTATTCAGAGCACGTGAAGTTGAAACAGGGAGGATTCTTGCACTTAAGAAAGTGCGTTTTGACAACTTTCAACCAGAGAGTATTAGGTTTATGGCTCGCGAGATTATGATTCTTCGTAGGCTTGATCATCCTAACATCATGAAACTGGAGGGGATAATAACATCTCGATCATCGAGTAGCATATACCTAGTGTTTGAGTACATGGAGCATGATCTGGCTGGACTAGTAGCTGCTAATGACATCAAATTCAGTGACGTGCAGATTAAATGCTATATGAGGCAGCTATTATCTGCAGTCGAGCATTGTCATTTGAGAGGTATTATGCATCGAGACATCAAGGCGTCGAATATATTGGTAAACAATGAAGGGATTTTGAAGTTGGCAGATTTTGGATTGGCAAATGTGGTAAACTCAAAAAGCAATCAACCACTAACAAGTAGGGTGGTGACCTTGTGGTATCGTCCTCCCGAACTCTTGATGGGGGCAACGGAGTATGGAGTATCTGTGGATCTCTGGAGTGTGGGCTGTGTGTTTGCAGAACTCTATCTAGGGAAGCCTGTTCTTAAAGGAAGAACTGAGGTTGAACAATTACACAAAATTTTCAAGCTTTGTGGTTCTCCACCTGAAGATTACTGGAAGAACTCAAAGCTTCCTCACGCAACAATGTTTAAACCTCAGTATTCTTATGAAAGTTCTCTTAGGGAAAGATGTAAGGAATTTCCAACCACATCGGTGGACTTGTTACAAACACTTCTTTCAGTAGAACCTTACAACCGCGGAACTGCATCCTCTGCCCTTATGTCTGAGTATTTCAGAACAAAGCCTTATGCTTGCGATCCAGCAAAGTTGCCGAAGTATCCTCCCACCAAGGAAATGGATGCTAAAAGTCGTGAGGATGCACAGAAGAAAAAGCATGGTCCTCGAGCACGAGAGACAGCGGCCAAGAAACCAAGGAGATTCCGAAAGACTGCGCAAGAGACCAACTCTGCAAAGTTAGCACCAAAAGAGGATAGACAAGACGATAACAGTAGCCAATTATCTCGTAGAAATCATGGCGGTTACCCCCATATTCTGAGGCCAAAAGCAAGTCTTCTGCGTAGAGAGTCTCAAACAGCGGCATTTGATACAGTTTCAGAGAACTACGAGTTGAATGCACCCGAAGGAGACAGCACATTCTCCTCTGCTGCAGGCGCACAAGCAGGAGGTGGAAGCGGCTTTGCATGGGCTAAAAGGCGAAACGCAGAATTCAGTACTAAATCCGTGGTTTCAGATGGCTCGAAAAGCCAATTCAGTGTGTTAGATACAACTTTCGCCAAGAGTGCATTTGACTTGTCGAAACCAGGGAATGACAATGCCAAGACAATCCGAAAGATGCGAACTTTTGATGGATCGGAACTTTTCTGTGCAGATGGTCCCGAAGAAGACGATGCAGAAAACAATATGAATCACAAGTCAGTAGACAAACATGTTATCGAGTACTCGGGTCCATTACTATCCCAACATAGTAGAATCGATGAACACTTGCGAAGAAACGAGAGTCATCTTCGTCATGTGGCTCGCAGATCAAGGTTCGAAAGAGAAGCAGAACCAGCACCCTCACGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051726 GO:0065007 GO:0071704 GO:0071944 GO:0097472 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase WRKY

Protein Analysis

700

Amino Acids

78.51

Weight (kDa)

9.32

Isoelectric Point (pI)

49.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	153 - 437	3.3e-66	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	155 - 366	7.8e-31	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007567)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01085 AT3G01085 AT3G01085 AT5G39420
fragaria_vesca	FvH4_6g47810 FvH4_6g47810
malus_domestica	MD09G1056500.v1.1 MD17G1054000.v1.1
prunus_persica	Prupe.3G262200_v2.0.a1 Prupe.3G262200_v2.0.a1
pyrus_communis	pycom111g04730
rosa_chinensis	RchiOBHm_Chr2g0167001
rosa_laevigata	RLG00000021688
rosa_multiflora	Rmu_co8508959.1_g000001
rosa_roxburghii	Rroxscaffold_2G00083820 Rroxscaffold_2G00083870
rosa_rugosa	Rorug02G0527400 Rorug02G0527500 Rorug02G0527600.1
rosa_samantha	Rh2AG594200 Rh2BG605700 Rh2CG576600 Rh2DG617200
rosa_wichuraiana	Rw2G049480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1470
AccB1I	GGYRCC	1 cut(s)	436
AccI	GTMKAC	1 cut(s)	1956
AccII	CGCG	2 cut(s)	597, 1275
AclWI	GGATC	4 cut(s)	216, 1014, 1328, 1894
AcoI	YGGCCR	1 cut(s)	1437
AcsI	RAATTY	4 cut(s)	743, 1095, 1214, 1742
AcuI	CTGAAG	2 cut(s)	311, 1143
AcvI	CACGTG	1 cut(s)	512
AcyI	GRCGYC	1 cut(s)	839
AfaI	GTAC	3 cut(s)	698, 1750, 1976
AfiI	CCNNNNNNNGG	1 cut(s)	387
AflII	CTTAAG	1 cut(s)	542
AflIII	ACRYGT	1 cut(s)	1963
AgsI	TTSAA	7 cut(s)	337, 521, 569, 874, 1082, 1102, 1648
AhlI	ACTAGT	1 cut(s)	721
AjiI	CACGTC	1 cut(s)	754
AjnI	CCWGG	1 cut(s)	1837
AleI	CACNNNNGTG	1 cut(s)	1229
AluBI	AGCT	9 cut(s)	15, 289, 323, 333, 449, 728, 781, 1105, 1147
AluI	AGCT	9 cut(s)	15, 289, 323, 333, 449, 728, 781, 1105, 1147
Alw21I	GWGCWC	2 cut(s)	511, 1426
Alw26I	GTCTC	7 cut(s)	42, 147, 822, 1424, 1469, 1608, 1656
AlwI	GGATC	4 cut(s)	216, 1014, 1328, 1894
Ama87I	CYCGRG	3 cut(s)	89, 1419, 1978
AoxI	GGCC	4 cut(s)	60, 389, 1437, 1574
ApeKI	GCWGC	5 cut(s)	186, 410, 728, 778, 1682
ApoI	RAATTY	4 cut(s)	743, 1095, 1214, 1742
AspLEI	GCGC	3 cut(s)	407, 1471, 1691
AspS9I	GGNCC	4 cut(s)	61, 1415, 1910, 1982
AsuC2I	CCSGG	1 cut(s)	33
AsuHPI	GGTGA	1 cut(s)	955
AsuII	TTCGAA	1 cut(s)	2070
AvaI	CYCGRG	3 cut(s)	89, 1419, 1978
AvaII	GGWCC	3 cut(s)	1415, 1910, 1982
BaeGI	GKGCMC	1 cut(s)	441
BanI	GGYRCC	1 cut(s)	436
BauI	CACGAG	1 cut(s)	1425
BbrPI	CACGTG	1 cut(s)	512
BbsI	GAAGAC	2 cut(s)	1580, 1926
Bbv12I	GWGCWC	2 cut(s)	511, 1426
BbvI	GCAGC	5 cut(s)	198, 397, 715, 790, 1669
BccI	CCATC	5 cut(s)	431, 970, 1763, 1877, 1901
BceAI	ACGGC	1 cut(s)	247
BcgI	CGANNNNNNTGC	4 cut(s)	1400, 1434, 1631, 1665
BciT130I	CCWGG	1 cut(s)	1839
BciVI	GTATCC	1 cut(s)	1365
BclI	TGATCA	2 cut(s)	217, 622
BcnI	CCSGG	1 cut(s)	33
BcoDI	GTCTC	7 cut(s)	42, 147, 822, 1424, 1469, 1608, 1656
BcuI	ACTAGT	1 cut(s)	721
BfaI	CTAG	3 cut(s)	686, 722, 1046
BfmI	CTRYAG	2 cut(s)	789, 1683
BfoI	RGCGCY	1 cut(s)	408
BfrI	CTTAAG	1 cut(s)	542
BfuI	GTATCC	1 cut(s)	1365
BglI	GCCNNNNNGGC	1 cut(s)	397
BglII	AGATCT	1 cut(s)	356
BlpI	GCTNAGC	1 cut(s)	401
BmcAI	AGTACT	2 cut(s)	1750, 1976
Bme1390I	CCNGG	2 cut(s)	33, 1839
Bme18I	GGWCC	3 cut(s)	1415, 1910, 1982
BmeT110I	CYCGRG	3 cut(s)	89, 1419, 1978
BmgBI	CACGTC	1 cut(s)	754
BmgT120I	GGNCC	4 cut(s)	61, 1415, 1910, 1982
BmiI	GGNNCC	4 cut(s)	30, 438, 1912, 1983
BmrFI	CCNGG	2 cut(s)	33, 1839
BmsI	GCATC	7 cut(s)	18, 832, 1292, 1366, 1384, 1860, 1915
BpiI	GAAGAC	2 cut(s)	1580, 1926
BplI	GAGNNNNNCTC	2 cut(s)	1466, 1498
BpmI	CTGGAG	2 cut(s)	665, 1033
Bpu1102I	GCTNAGC	1 cut(s)	401
Bpu14I	TTCGAA	1 cut(s)	2070
BpuMI	CCSGG	1 cut(s)	33
Bsa29I	ATCGAT	1 cut(s)	2010
BsaAI	YACGTR	1 cut(s)	512
BsaBI	GATNNNNATC	1 cut(s)	222
BsaHI	GRCGYC	1 cut(s)	839
BsaI	GGTCTC	2 cut(s)	42, 1469
BsaJI	CCNNGG	6 cut(s)	32, 1273, 1365, 1448, 1758, 1838
BsaXI	ACNNNNNCTCC	4 cut(s)	248, 278, 987, 1017
Bsc4I	CCNNNNNNNGG	1 cut(s)	387
Bse118I	RCCGGY	1 cut(s)	383
Bse1I	ACTGG	2 cut(s)	648, 1136
Bse8I	GATNNNNATC	1 cut(s)	222
BseBI	CCWGG	1 cut(s)	1839
BseCI	ATCGAT	1 cut(s)	2010
BseDI	CCNNGG	6 cut(s)	32, 1273, 1365, 1448, 1758, 1838
BseGI	GGATG	4 cut(s)	625, 1283, 1381, 1399
BseJI	GATNNNNATC	1 cut(s)	222
BseLI	CCNNNNNNNGG	1 cut(s)	387
BseMII	CTCAG	5 cut(s)	415, 1065, 1187, 1293, 1562
BseNI	ACTGG	2 cut(s)	648, 1136
BseRI	GAGGAG	1 cut(s)	1666
BseSI	GKGCMC	1 cut(s)	441
BseXI	GCAGC	5 cut(s)	198, 397, 715, 790, 1669
BsgI	GTGCAG	2 cut(s)	776, 1923
Bsh1236I	CGCG	2 cut(s)	597, 1275
BshFI	GGCC	4 cut(s)	62, 391, 1439, 1576
BshNI	GGYRCC	1 cut(s)	436
BshVI	ATCGAT	1 cut(s)	2010
BsiHKAI	GWGCWC	2 cut(s)	511, 1426
BsiHKCI	CYCGRG	3 cut(s)	89, 1419, 1978
BsiSI	CCGG	3 cut(s)	32, 384, 414
BslFI	GGGAC	1 cut(s)	1896
BslI	CCNNNNNNNGG	1 cut(s)	387
BsmAI	GTCTC	7 cut(s)	42, 147, 822, 1424, 1469, 1608, 1656
BsmBI	CGTCTC	1 cut(s)	147
BsmFI	GGGAC	1 cut(s)	1896
BsmI	GAATGC	1 cut(s)	1654
BsnI	GGCC	4 cut(s)	62, 391, 1439, 1576
Bso31I	GGTCTC	2 cut(s)	42, 1469
BsoBI	CYCGRG	3 cut(s)	89, 1419, 1978
Bsp119I	TTCGAA	1 cut(s)	2070
Bsp1286I	GDGCHC	3 cut(s)	441, 511, 1426
Bsp1720I	GCTNAGC	1 cut(s)	401
Bsp68I	TCGCGA	1 cut(s)	597
BspANI	GGCC	4 cut(s)	62, 391, 1439, 1576
BspCNI	CTCAG	5 cut(s)	414, 1066, 1186, 1294, 1563
BspDI	ATCGAT	1 cut(s)	2010
BspFNI	CGCG	2 cut(s)	597, 1275
BspHI	TCATGA	1 cut(s)	636
BspLI	GGNNCC	4 cut(s)	30, 438, 1912, 1983
BspMAI	CTGCAG	2 cut(s)	793, 1687
BspPI	GGATC	4 cut(s)	216, 1014, 1328, 1894
BspT104I	TTCGAA	1 cut(s)	2070
BspT107I	GGYRCC	1 cut(s)	436
BspTI	CTTAAG	1 cut(s)	542
BspTNI	GGTCTC	2 cut(s)	42, 1469
BsrFI	RCCGGY	1 cut(s)	383
BsrI	ACTGG	2 cut(s)	648, 1136
BssAI	RCCGGY	1 cut(s)	383
BssECI	CCNNGG	6 cut(s)	32, 1273, 1365, 1448, 1758, 1838
BssNI	GRCGYC	1 cut(s)	839
BssSI	CACGAG	1 cut(s)	1425
BssT1I	CCWWGG	2 cut(s)	1365, 1448
Bst2BI	CACGAG	1 cut(s)	1425
Bst2UI	CCWGG	1 cut(s)	1839
Bst4CI	ACNGT	5 cut(s)	170, 431, 1526, 1627, 2100
BstACI	GRCGYC	1 cut(s)	839
BstAFI	CTTAAG	1 cut(s)	542
BstAPI	GCANNNNNTGC	1 cut(s)	1289
BstBAI	YACGTR	1 cut(s)	512
BstBI	TTCGAA	1 cut(s)	2070
BstC8I	GCNNGC	7 cut(s)	24, 385, 389, 595, 1330, 1687, 2056
BstDEI	CTNAG	6 cut(s)	401, 1074, 1173, 1196, 1302, 1571
BstDSI	CCRYGG	2 cut(s)	1273, 1758
BstEII	GGTNACC	2 cut(s)	943, 1556
BstF5I	GGATG	4 cut(s)	625, 1283, 1381, 1399
BstFNI	CGCG	2 cut(s)	597, 1275
BstH2I	RGCGCY	1 cut(s)	408
BstHHI	GCGC	3 cut(s)	407, 1471, 1691
BstMAI	GTCTC	7 cut(s)	42, 147, 822, 1424, 1469, 1608, 1656
BstMWI	GCNNNNNNNGC	8 cut(s)	397, 419, 1289, 1493, 1688, 1779, 1817, 2087
BstNI	CCWGG	1 cut(s)	1839
BstNSI	RCATGY	1 cut(s)	1967
BstPI	GGTNACC	2 cut(s)	943, 1556
BstSCI	CCNGG	2 cut(s)	31, 1837
BstSFI	CTRYAG	2 cut(s)	789, 1683
BstSLI	GKGCMC	1 cut(s)	441
BstUI	CGCG	2 cut(s)	597, 1275
BstV1I	GCAGC	5 cut(s)	198, 397, 715, 790, 1669
BstV2I	GAAGAC	2 cut(s)	1580, 1926
BstX2I	RGATCY	2 cut(s)	356, 1006
BstXI	CCANNNNNNTGG	2 cut(s)	1231, 1372
BstYI	RGATCY	2 cut(s)	356, 1006
Bsu15I	ATCGAT	1 cut(s)	2010
BsuI	GTATCC	1 cut(s)	1365
BsuRI	GGCC	4 cut(s)	62, 391, 1439, 1576
BsuTUI	ATCGAT	1 cut(s)	2010
BtgI	CCRYGG	2 cut(s)	1273, 1758
BtrI	CACGTC	1 cut(s)	754
BtsCI	GGATG	4 cut(s)	625, 1283, 1381, 1399
BtsI	GCAGTG	1 cut(s)	502
BtsIMutI	CAGTG	3 cut(s)	502, 754, 1795
BtuMI	TCGCGA	1 cut(s)	597
Cac8I	GCNNGC	7 cut(s)	24, 385, 389, 595, 1330, 1687, 2056
CciI	TCATGA	1 cut(s)	636
CfoI	GCGC	3 cut(s)	407, 1471, 1691
Cfr10I	RCCGGY	1 cut(s)	383
Cfr13I	GGNCC	4 cut(s)	61, 1415, 1910, 1982
Cfr42I	CCGCGG	1 cut(s)	1276
ClaI	ATCGAT	1 cut(s)	2010
CseI	GACGC	2 cut(s)	461, 828
Csp6I	GTAC	3 cut(s)	697, 1749, 1975
CspCI	CAANNNNNGTGG	4 cut(s)	921, 956, 1090, 1125
CviAII	CATG	9 cut(s)	42, 637, 700, 707, 1412, 1550, 1719, 1964, 2048
CviQI	GTAC	3 cut(s)	697, 1749, 1975
DdeI	CTNAG	6 cut(s)	401, 1074, 1173, 1196, 1302, 1571
DraI	TTTAAA	1 cut(s)	1168
EaeI	YGGCCR	1 cut(s)	1437
Eco130I	CCWWGG	2 cut(s)	1365, 1448
Eco31I	GGTCTC	2 cut(s)	42, 1469
Eco47I	GGWCC	3 cut(s)	1415, 1910, 1982
Eco57I	CTGAAG	2 cut(s)	311, 1143
Eco72I	CACGTG	1 cut(s)	512
Eco88I	CYCGRG	3 cut(s)	89, 1419, 1978
Eco91I	GGTNACC	2 cut(s)	943, 1556
EcoO65I	GGTNACC	2 cut(s)	943, 1556
EcoRI	GAATTC	1 cut(s)	1742
EcoRII	CCWGG	1 cut(s)	1837
EcoT14I	CCWWGG	2 cut(s)	1365, 1448
EcoT22I	ATGCAT	1 cut(s)	825
ErhI	CCWWGG	2 cut(s)	1365, 1448
Esp3I	CGTCTC	1 cut(s)	147
FaeI	CATG	9 cut(s)	45, 640, 703, 710, 1415, 1553, 1722, 1967, 2051
FalI	AAGNNNNNCTT	2 cut(s)	1572, 1604
FaqI	GGGAC	1 cut(s)	1896
FatI	CATG	9 cut(s)	41, 636, 699, 706, 1411, 1549, 1718, 1963, 2047
FbaI	TGATCA	2 cut(s)	217, 622
FblI	GTMKAC	1 cut(s)	1956
FokI	GGATG	4 cut(s)	612, 1270, 1388, 1406
FspBI	CTAG	3 cut(s)	686, 722, 1046
FspI	TGCGCA	1 cut(s)	1470
GlaI	GCGC	3 cut(s)	406, 1470, 1690
GsuI	CTGGAG	2 cut(s)	665, 1033
HaeII	RGCGCY	1 cut(s)	408
HaeIII	GGCC	4 cut(s)	62, 391, 1439, 1576
HapII	CCGG	3 cut(s)	32, 384, 414
HgaI	GACGC	2 cut(s)	461, 828
HhaI	GCGC	3 cut(s)	407, 1471, 1691
Hin1I	GRCGYC	1 cut(s)	839
Hin1II	CATG	9 cut(s)	45, 640, 703, 710, 1415, 1553, 1722, 1967, 2051
Hin6I	GCGC	3 cut(s)	405, 1469, 1689
HinP1I	GCGC	3 cut(s)	405, 1469, 1689
HindIII	AAGCTT	2 cut(s)	1103, 1145
HinfI	GANTC	8 cut(s)	223, 532, 607, 1455, 1601, 1942, 2007, 2035
HpaII	CCGG	3 cut(s)	32, 384, 414
HphI	GGTGA	1 cut(s)	955
Hpy166II	GTNNAC	5 cut(s)	371, 856, 907, 1234, 1957
Hpy8I	GTNNAC	5 cut(s)	371, 856, 907, 1234, 1957
Hpy99I	CGWCG	2 cut(s)	272, 844
HpyAV	CCTTC	6 cut(s)	105, 199, 298, 402, 857, 1652
HpyCH4III	ACNGT	5 cut(s)	170, 431, 1526, 1627, 2100
HpyCH4IV	ACGT	3 cut(s)	140, 511, 753
HpyF10VI	GCNNNNNNNGC	8 cut(s)	397, 419, 1289, 1493, 1688, 1779, 1817, 2087
HpyF3I	CTNAG	6 cut(s)	401, 1074, 1173, 1196, 1302, 1571
HpySE526I	ACGT	3 cut(s)	140, 511, 753
Hsp92I	GRCGYC	1 cut(s)	839
Hsp92II	CATG	9 cut(s)	45, 640, 703, 710, 1415, 1553, 1722, 1967, 2051
HspAI	GCGC	3 cut(s)	405, 1469, 1689
KroI	GCCGGC	1 cut(s)	383
KroNI	GCCGGC	1 cut(s)	385
Ksp22I	TGATCA	2 cut(s)	217, 622
KspI	CCGCGG	1 cut(s)	1276
LmnI	GCTCC	3 cut(s)	34, 286, 703
Lsp1109I	GCAGC	5 cut(s)	198, 397, 715, 790, 1669
LweI	GCATC	7 cut(s)	18, 832, 1292, 1366, 1384, 1860, 1915
MaeI	CTAG	3 cut(s)	686, 722, 1046
MaeII	ACGT	3 cut(s)	140, 511, 753
MaeIII	GTNAC	4 cut(s)	749, 943, 1239, 1556
MflI	RGATCY	2 cut(s)	356, 1006
MhlI	GDGCHC	3 cut(s)	441, 511, 1426
MluCI	AATT	9 cut(s)	155, 464, 743, 1085, 1095, 1214, 1532, 1742, 1784
MlyI	GAGTC	2 cut(s)	1610, 2044
MmeI	TCCRAC	2 cut(s)	291, 1244
Mph1103I	ATGCAT	1 cut(s)	825
MroNI	GCCGGC	1 cut(s)	383
MseI	TTAA	6 cut(s)	135, 198, 543, 762, 1062, 1167
MslI	CAYNNNNRTG	1 cut(s)	1229
MspA1I	CMGCKG	5 cut(s)	59, 410, 1275, 1436, 1613
MspCI	CTTAAG	1 cut(s)	542
MspI	CCGG	3 cut(s)	32, 384, 414
MspR9I	CCNGG	2 cut(s)	33, 1839
MssI	GTTTAAAC	1 cut(s)	1168
Mva1269I	GAATGC	1 cut(s)	1654
MvaI	CCWGG	1 cut(s)	1839
MvnI	CGCG	2 cut(s)	597, 1275
MwoI	GCNNNNNNNGC	8 cut(s)	397, 419, 1289, 1493, 1688, 1779, 1817, 2087
NaeI	GCCGGC	1 cut(s)	385
NciI	CCSGG	1 cut(s)	33
NgoMIV	GCCGGC	1 cut(s)	383
NlaIII	CATG	9 cut(s)	45, 640, 703, 710, 1415, 1553, 1722, 1967, 2051
NlaIV	GGNNCC	4 cut(s)	30, 438, 1912, 1983
NmuCI	GTSAC	2 cut(s)	749, 943
NruI	TCGCGA	1 cut(s)	597
NsbI	TGCGCA	1 cut(s)	1470
NsiI	ATGCAT	1 cut(s)	825
NspI	RCATGY	1 cut(s)	1967
NspV	TTCGAA	1 cut(s)	2070
OliI	CACNNNNGTG	1 cut(s)	1229
PaeR7I	CTCGAG	2 cut(s)	89, 1419
PagI	TCATGA	1 cut(s)	636
PciI	ACATGT	1 cut(s)	1963
PcsI	WCGNNNNNNNCGW	1 cut(s)	96
PctI	GAATGC	1 cut(s)	1654
PdiI	GCCGGC	1 cut(s)	385
PfeI	GAWTC	6 cut(s)	223, 532, 607, 1455, 1942, 2007
PleI	GAGTC	2 cut(s)	1609, 2043
PmaCI	CACGTG	1 cut(s)	512
PmeI	GTTTAAAC	1 cut(s)	1168
PmlI	CACGTG	1 cut(s)	512
PpsI	GAGTC	2 cut(s)	1609, 2043
Ppu21I	YACGTR	1 cut(s)	512
PscI	ACATGT	1 cut(s)	1963
Psp6I	CCWGG	1 cut(s)	1837
PspCI	CACGTG	1 cut(s)	512
PspEI	GGTNACC	2 cut(s)	943, 1556
PspGI	CCWGG	1 cut(s)	1837
PspN4I	GGNNCC	4 cut(s)	30, 438, 1912, 1983
PspPI	GGNCC	4 cut(s)	61, 1415, 1910, 1982
PspXI	VCTCGAGB	1 cut(s)	1419
PstI	CTGCAG	2 cut(s)	793, 1687
PsuI	RGATCY	2 cut(s)	356, 1006
RruI	TCGCGA	1 cut(s)	597
RsaI	GTAC	3 cut(s)	698, 1750, 1976
RsaNI	GTAC	3 cut(s)	697, 1749, 1975
RseI	CAYNNNNRTG	1 cut(s)	1229
SacII	CCGCGG	1 cut(s)	1276
SaqAI	TTAA	6 cut(s)	135, 198, 543, 762, 1062, 1167
Sau96I	GGNCC	4 cut(s)	61, 1415, 1910, 1982
ScaI	AGTACT	2 cut(s)	1750, 1976
SchI	GAGTC	2 cut(s)	1610, 2044
ScrFI	CCNGG	2 cut(s)	33, 1839
SduI	GDGCHC	3 cut(s)	441, 511, 1426
SfaNI	GCATC	7 cut(s)	18, 832, 1292, 1366, 1384, 1860, 1915
SfcI	CTRYAG	2 cut(s)	789, 1683
Sfr274I	CTCGAG	2 cut(s)	89, 1419
Sfr303I	CCGCGG	1 cut(s)	1276
SfuI	TTCGAA	1 cut(s)	2070
SgrBI	CCGCGG	1 cut(s)	1276
SinI	GGWCC	3 cut(s)	1415, 1910, 1982
SlaI	CTCGAG	2 cut(s)	89, 1419
SmiMI	CAYNNNNRTG	1 cut(s)	1229
SmlI	CTYRAG	3 cut(s)	89, 542, 1419
SmoI	CTYRAG	3 cut(s)	89, 542, 1419
SpeI	ACTAGT	1 cut(s)	721
Sse9I	AATT	9 cut(s)	155, 464, 743, 1085, 1095, 1214, 1532, 1742, 1784
SspMI	CTAG	3 cut(s)	686, 722, 1046
StyD4I	CCNGG	2 cut(s)	31, 1837
StyI	CCWWGG	2 cut(s)	1365, 1448
TaaI	ACNGT	5 cut(s)	170, 431, 1526, 1627, 2100
TaiI	ACGT	3 cut(s)	143, 514, 756
TasI	AATT	9 cut(s)	155, 464, 743, 1085, 1095, 1214, 1532, 1742, 1784
TatI	WGTACW	3 cut(s)	696, 1748, 1974
TauI	GCSGC	7 cut(s)	29, 62, 383, 410, 1439, 1616, 1713
TfiI	GAWTC	6 cut(s)	223, 532, 607, 1455, 1942, 2007
Tru1I	TTAA	6 cut(s)	135, 198, 543, 762, 1062, 1167
Tru9I	TTAA	6 cut(s)	135, 198, 543, 762, 1062, 1167
TscAI	CASTG	3 cut(s)	502, 754, 1795
TseFI	GTSAC	2 cut(s)	749, 943
TseI	GCWGC	5 cut(s)	186, 410, 728, 778, 1682
Tsp45I	GTSAC	2 cut(s)	749, 943
TspDTI	ATGAA	5 cut(s)	653, 876, 1200, 1955, 2028
TspGWI	ACGGA	3 cut(s)	88, 1001, 1747
TspRI	CASTG	3 cut(s)	502, 754, 1795
Vha464I	CTTAAG	1 cut(s)	542
VpaK11BI	GGWCC	3 cut(s)	1415, 1910, 1982
XapI	RAATTY	4 cut(s)	743, 1095, 1214, 1742
XceI	RCATGY	1 cut(s)	1967
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1369
XhoI	CTCGAG	2 cut(s)	89, 1419
XmiI	GTMKAC	1 cut(s)	1956
XspI	CTAG	3 cut(s)	686, 722, 1046
ZrmI	AGTACT	2 cut(s)	1750, 1976
Zsp2I	ATGCAT	1 cut(s)	825

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.