Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0005745

Physical Location & Seq

Genomic Coordinates Forward (+)

13938596 .. 13942867

Gene Structure 4272 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00092390.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1734 bp

ATGTCCCCGGAGCGGCAATCCTGGACCATCGATCCCGACCTGGACGGGATCGACCTGGACGCCGCCGACTTCGCCTCCTCCCTCCCCATTAAAAAAGTCCCAAACGGCGACGTTTTCGAGGCCTCACGCGCCGGCGACGTCGACCGCCTCAGGTACTTGTTAGAGTCCGGGGTCAACGTCAACGTGCGTGACCAGTGGGACTCGGTGGCGCTCTACTACGCGTGCCTCGCCGGACACCTCGAGGCGGCGCGTATGTTGCTGGAGCACGGAGCTATATGCACGGAGCATACTTTTGACGGCGATCGGTGTCATTACGCGGCGCTGAATTTGAAGGTGAGGAAGCTTTTGAAGGCGTTTGAGGCGCGGCCGCCGCCGTTGGGCCCGTTGCAGGCGGCCATGAGAGAGACCTTCTTGGGCTGTGCGGCTAATTGGGCCTATTTGGAGCAGGCCCAGTTTGAAACTTCAGGTCTTCCAGCCAGTGATGGATATTTTCCTCCAGATGTGGTATTTTTTGTTCAAGGGAGAGCCATTGAAGCTCATAGAGTCATCTTAAGTGCGCGGTCACCATTTTTCAGAAGAAAGTTTGTGACTGATTGGAAAGAACGCAGAGAAGTGAGATTTTCAAGGGAAAAGTTGTCATATCCTGCTCTATACAGTCTTATCCAATTCTTTTACTCCGACAGACTAGAAGTTGCTGTAGATGGTATGGAGGATCTTGTGAGGATCTGCAAAGTATGTAAATGTGAATCTTTACAAAGAATTCTCGAGAAAGAATTGATTCACCAAAAGTATGCCGAGTACAAAGCATTGAGAGATATAGACAGCTCTATAAAACGCTTCATCTTACAAGGTGTCTCTCTTCCTGAAGACGATCGGCTTCCTGCAACTTTGCATGAGATCCTTCAGATTTCCCTTGCCAATTCCACCAGGGAACTTAACCTAGATAATGGTGTCAAAGAATTAACATCTTCTGTGGGTACCATGCAAATCAGTGATTTTGTAGAGGATCTTGCAGATGTTTGTGTAAAAGTTGATAAAAAGAGTTTTCGATGCCATCAAGTGGTTTTAGCATCAAGGTCAGAGTATTTTAAAGCAAGATTATCCCGTATGAAGGACTTTCATGAAGGAAAAAGTGATATACCTGTTCATACCCTTCCATGTCTTGAGGAACATGATTTAAGCTCTGAAGCATTCGAGAAGATGATCGAGTATATGTACACTGACGGATTGAAGGATATAGACCCGGATCAGGCAGGGGAAGTCTTTGATGCTGCCTCTAGATATTTATTATTTCCTCTTAAGCGTGCTGTTGCTGATGTACTACTGCCACACCTGGAAAATGTCTCACCGGCAGAATTGTGCAATTGGCTGATATTATCAGACATGTATGGCGTTCTGAAGATAAGGGAATTTTGTTTAGATACAATGGCTTGTAACTTTGAGACATTTGCTGATACTCGTGAGTTCCGAGCAATGCTGTTGACACTCCCTCCACCATCTGGGGATTCATCACTTCGCACCACTAATCCAAGTGCACCGGGAGCTGAAGTCAATACAGACCAACGCAATGTTCTTGATGACTTAAGAGAAAAATGGCTTGAAGCTGAAGCTGCGGAGCTTGACAAGAGAGATGAGAGCGCACTACTTTTTGATAAACGACTTGAGATGCTTGTGGTTGTTGCAGAACAAGAAAAGTGTGATGCAGATCTTACTGATGATATCAATGGTTCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0019005 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0030162 GO:0030163 GO:0031461 GO:0031625 GO:0032991 GO:0043161 GO:0043170 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044424 GO:0044464 GO:0050789 GO:0051171 GO:0051246 GO:0051603 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank_4 Ank_5 BTB

Protein Analysis

577

Amino Acids

65.41

Weight (kDa)

4.92

Isoelectric Point (pI)

44.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_4	PF13637	39 - 87	2.3e-08	Ankyrin repeats (many copies)
Ank_2	PF12796	40 - 113	7e-08	Ankyrin repeats (3 copies)
BTB	PF00651	166 - 262	5.6e-15	BTB/POZ domain
BTB	PF00651	336 - 441	1.3e-14	BTB/POZ domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005745)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04740 AT2G04740 AT2G04740 AT2G04740
fragaria_vesca	FvH4_6g41550 FvH4_6g41550 FvH4_6g41550 FvH4_6g41550
malus_domestica	MD17G1109800.v1.1
prunus_persica	Prupe.3G205300_v2.0.a1
pyrus_communis	pycom17g10210
rosa_chinensis	RchiOBHm_Chr2g0157231
rosa_laevigata	RLG00000020973
rosa_multiflora	Rmu_sc0006282.1_g000006 Rmu_sc0018717.1_g000001 Rmu_sc0028571.1_g000001
rosa_roxburghii	Rroxscaffold_2G00092390
rosa_rugosa	Rorug02G0458600 Rorug02G0458700 Rorug02G0458700 Rorug02G0458800 Rorug02G0458900
rosa_samantha	Rh2AG524000 Rh2BG538400 Rh2CG508800 Rh2DG547300
rosa_wichuraiana	Rw2G043340 Rw2G043400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	141
AbsI	CCTCGAGG	1 cut(s)	239
Acc65I	GGTACC	1 cut(s)	977
AccB1I	GGYRCC	1 cut(s)	977
AccB7I	CCANNNNNTGG	2 cut(s)	1060, 1499
AccBSI	CCGCTC	1 cut(s)	13
AccI	GTMKAC	1 cut(s)	141
AccII	CGCG	6 cut(s)	129, 221, 250, 317, 364, 559
AclWI	GGATC	7 cut(s)	26, 56, 720, 731, 892, 1014, 1254
AcoI	YGGCCR	2 cut(s)	365, 393
AcsI	RAATTY	3 cut(s)	325, 759, 1409
AcuI	CTGAAG	7 cut(s)	447, 885, 887, 1206, 1418, 1566, 1626
AcyI	GRCGYC	2 cut(s)	60, 138
AfaI	GTAC	5 cut(s)	155, 800, 979, 1217, 1320
AfiI	CCNNNNNNNGG	8 cut(s)	12, 244, 377, 388, 1060, 1111, 1249, 1499
AflII	CTTAAG	3 cut(s)	550, 1298, 1582
AflIII	ACRYGT	2 cut(s)	219, 1383
AgsI	TTSAA	8 cut(s)	331, 349, 458, 518, 533, 624, 1231, 1601
AjnI	CCWGG	5 cut(s)	20, 39, 54, 926, 1332
AjuI	GAANNNNNNNTTGG	2 cut(s)	1554, 1586
AluBI	AGCT	9 cut(s)	272, 343, 536, 825, 1182, 1544, 1604, 1610, 1618
AluI	AGCT	9 cut(s)	272, 343, 536, 825, 1182, 1544, 1604, 1610, 1618
Alw21I	GWGCWC	2 cut(s)	267, 1537
Alw26I	GTCTC	4 cut(s)	398, 859, 1348, 1436
Alw44I	GTGCAC	1 cut(s)	1533
AlwI	GGATC	7 cut(s)	26, 56, 720, 731, 892, 1014, 1254
Ama87I	CYCGRG	2 cut(s)	239, 764
AoxI	GGCC	6 cut(s)	120, 365, 379, 393, 432, 447
ApaI	GGGCCC	1 cut(s)	383
ApaLI	GTGCAC	1 cut(s)	1533
ApeKI	GCWGC	2 cut(s)	1271, 1610
ApoI	RAATTY	3 cut(s)	325, 759, 1409
Asp700I	GAANNNNTTC	1 cut(s)	777
Asp718I	GGTACC	1 cut(s)	977
AspLEI	GCGC	7 cut(s)	131, 211, 250, 322, 364, 559, 1640
AspS9I	GGNCC	5 cut(s)	24, 379, 380, 432, 448
AsuC2I	CCSGG	4 cut(s)	8, 169, 1244, 1539
AsuHPI	GGTGA	4 cut(s)	346, 555, 773, 1338
AvaI	CYCGRG	2 cut(s)	239, 764
AvaII	GGWCC	1 cut(s)	24
AxyI	CCTNAGG	1 cut(s)	149
BaeGI	GKGCMC	2 cut(s)	383, 1537
BanI	GGYRCC	1 cut(s)	977
BanII	GRGCYC	1 cut(s)	383
BauI	CACGAG	1 cut(s)	1458
BbsI	GAAGAC	2 cut(s)	461, 873
Bbv12I	GWGCWC	2 cut(s)	267, 1537
BbvI	GCAGC	2 cut(s)	1258, 1597
BccI	CCATC	5 cut(s)	35, 476, 695, 1062, 1504
BceAI	ACGGC	3 cut(s)	121, 313, 358
BciT130I	CCWGG	5 cut(s)	22, 41, 56, 928, 1334
BcnI	CCSGG	4 cut(s)	8, 169, 1244, 1539
BcoDI	GTCTC	4 cut(s)	398, 859, 1348, 1436
BfaI	CTAG	4 cut(s)	686, 941, 1278, 1732
BfmI	CTRYAG	1 cut(s)	696
BfoI	RGCGCY	2 cut(s)	212, 323
BfrI	CTTAAG	3 cut(s)	550, 1298, 1582
BglII	AGATCT	1 cut(s)	1705
Bme1390I	CCNGG	9 cut(s)	8, 22, 41, 56, 169, 928, 1244, 1334, 1539
Bme18I	GGWCC	1 cut(s)	24
BmeT110I	CYCGRG	2 cut(s)	239, 764
BmgT120I	GGNCC	5 cut(s)	24, 379, 380, 432, 448
BmiI	GGNNCC	3 cut(s)	381, 979, 1729
BmrFI	CCNGG	9 cut(s)	8, 22, 41, 56, 169, 928, 1244, 1334, 1539
BmrI	ACTGGG	1 cut(s)	445
BmsI	GCATC	5 cut(s)	1040, 1079, 1258, 1656, 1690
BmuI	ACTGGG	1 cut(s)	445
BpiI	GAAGAC	2 cut(s)	461, 873
BpmI	CTGGAG	2 cut(s)	281, 480
BpuEI	CTTGAG	2 cut(s)	1184, 1682
BpuMI	CCSGG	4 cut(s)	8, 169, 1244, 1539
Bsa29I	ATCGAT	1 cut(s)	30
BsaBI	GATNNNNATC	1 cut(s)	1704
BsaHI	GRCGYC	2 cut(s)	60, 138
BsaI	GGTCTC	1 cut(s)	398
BsaJI	CCNNGG	3 cut(s)	6, 168, 927
BsaXI	ACNNNNNCTCC	6 cut(s)	59, 89, 1474, 1504, 1533, 1563
Bsc4I	CCNNNNNNNGG	8 cut(s)	12, 244, 377, 388, 1060, 1111, 1249, 1499
Bse118I	RCCGGY	2 cut(s)	131, 1348
Bse1I	ACTGG	3 cut(s)	193, 451, 477
Bse21I	CCTNAGG	1 cut(s)	149
Bse3DI	GCAATG	2 cut(s)	1479, 1573
Bse8I	GATNNNNATC	1 cut(s)	1704
BseBI	CCWGG	5 cut(s)	22, 41, 56, 928, 1334
BseCI	ATCGAT	1 cut(s)	30
BseDI	CCNNGG	3 cut(s)	6, 168, 927
BseJI	GATNNNNATC	1 cut(s)	1704
BseLI	CCNNNNNNNGG	8 cut(s)	12, 244, 377, 388, 1060, 1111, 1249, 1499
BseMI	GCAATG	2 cut(s)	1479, 1573
BseMII	CTCAG	1 cut(s)	163
BseNI	ACTGG	3 cut(s)	193, 451, 477
BseRI	GAGGAG	1 cut(s)	67
BseSI	GKGCMC	2 cut(s)	383, 1537
BseX3I	CGGCCG	1 cut(s)	365
BseXI	GCAGC	2 cut(s)	1258, 1597
Bsh1236I	CGCG	6 cut(s)	129, 221, 250, 317, 364, 559
Bsh1285I	CGRYCG	4 cut(s)	145, 304, 368, 874
BshFI	GGCC	6 cut(s)	122, 367, 381, 395, 434, 449
BshNI	GGYRCC	1 cut(s)	977
BshVI	ATCGAT	1 cut(s)	30
BsiEI	CGRYCG	4 cut(s)	145, 304, 368, 874
BsiHKAI	GWGCWC	2 cut(s)	267, 1537
BsiHKCI	CYCGRG	2 cut(s)	239, 764
BsiSI	CCGG	7 cut(s)	8, 132, 168, 231, 1244, 1349, 1538
BslFI	GGGAC	2 cut(s)	83, 212
BslI	CCNNNNNNNGG	8 cut(s)	12, 244, 377, 388, 1060, 1111, 1249, 1499
BsmAI	GTCTC	4 cut(s)	398, 859, 1348, 1436
BsmFI	GGGAC	2 cut(s)	83, 212
BsmI	GAATGC	1 cut(s)	1190
BsnI	GGCC	6 cut(s)	122, 367, 381, 395, 434, 449
Bso31I	GGTCTC	1 cut(s)	398
BsoBI	CYCGRG	2 cut(s)	239, 764
Bsp120I	GGGCCC	1 cut(s)	379
Bsp1286I	GDGCHC	3 cut(s)	267, 383, 1537
Bsp1407I	TGTACA	1 cut(s)	1215
BspANI	GGCC	6 cut(s)	122, 367, 381, 395, 434, 449
BspCNI	CTCAG	1 cut(s)	162
BspDI	ATCGAT	1 cut(s)	30
BspFNI	CGCG	6 cut(s)	129, 221, 250, 317, 364, 559
BspHI	TCATGA	1 cut(s)	1120
BspLI	GGNNCC	3 cut(s)	381, 979, 1729
BspPI	GGATC	7 cut(s)	26, 56, 720, 731, 892, 1014, 1254
BspT107I	GGYRCC	1 cut(s)	977
BspTI	CTTAAG	3 cut(s)	550, 1298, 1582
BspTNI	GGTCTC	1 cut(s)	398
BsrBI	CCGCTC	1 cut(s)	13
BsrDI	GCAATG	2 cut(s)	1479, 1573
BsrFI	RCCGGY	2 cut(s)	131, 1348
BsrGI	TGTACA	1 cut(s)	1215
BsrI	ACTGG	3 cut(s)	193, 451, 477
BssAI	RCCGGY	2 cut(s)	131, 1348
BssECI	CCNNGG	3 cut(s)	6, 168, 927
BssNI	GRCGYC	2 cut(s)	60, 138
BssSI	CACGAG	1 cut(s)	1458
Bst2BI	CACGAG	1 cut(s)	1458
Bst2UI	CCWGG	5 cut(s)	22, 41, 56, 928, 1334
Bst4CI	ACNGT	1 cut(s)	656
Bst6I	CTCTTC	1 cut(s)	864
BstACI	GRCGYC	2 cut(s)	60, 138
BstAFI	CTTAAG	3 cut(s)	550, 1298, 1582
BstAUI	TGTACA	1 cut(s)	1215
BstC8I	GCNNGC	5 cut(s)	133, 223, 390, 447, 1305
BstDEI	CTNAG	1 cut(s)	149
BstEII	GGTNACC	1 cut(s)	561
BstFNI	CGCG	6 cut(s)	129, 221, 250, 317, 364, 559
BstH2I	RGCGCY	2 cut(s)	212, 323
BstHHI	GCGC	7 cut(s)	131, 211, 250, 322, 364, 559, 1640
BstMAI	GTCTC	4 cut(s)	398, 859, 1348, 1436
BstMCI	CGRYCG	4 cut(s)	145, 304, 368, 874
BstNI	CCWGG	5 cut(s)	22, 41, 56, 928, 1334
BstNSI	RCATGY	1 cut(s)	1387
BstPI	GGTNACC	1 cut(s)	561
BstSCI	CCNGG	9 cut(s)	6, 20, 39, 54, 167, 926, 1242, 1332, 1537
BstSFI	CTRYAG	1 cut(s)	696
BstSLI	GKGCMC	2 cut(s)	383, 1537
BstUI	CGCG	6 cut(s)	129, 221, 250, 317, 364, 559
BstV1I	GCAGC	2 cut(s)	1258, 1597
BstV2I	GAAGAC	2 cut(s)	461, 873
BstX2I	RGATCY	5 cut(s)	712, 723, 897, 1006, 1705
BstYI	RGATCY	5 cut(s)	712, 723, 897, 1006, 1705
BstZI	CGGCCG	1 cut(s)	365
Bsu15I	ATCGAT	1 cut(s)	30
Bsu36I	CCTNAGG	1 cut(s)	149
BsuRI	GGCC	6 cut(s)	122, 367, 381, 395, 434, 449
BsuTUI	ATCGAT	1 cut(s)	30
BtsIMutI	CAGTG	4 cut(s)	200, 484, 997, 1218
Cac8I	GCNNGC	5 cut(s)	133, 223, 390, 447, 1305
CciI	TCATGA	1 cut(s)	1120
CciNI	GCGGCCGC	1 cut(s)	365
CfoI	GCGC	7 cut(s)	131, 211, 250, 322, 364, 559, 1640
Cfr10I	RCCGGY	2 cut(s)	131, 1348
Cfr13I	GGNCC	5 cut(s)	24, 379, 380, 432, 448
ClaI	ATCGAT	1 cut(s)	30
CseI	GACGC	1 cut(s)	68
Csp6I	GTAC	5 cut(s)	154, 799, 978, 1216, 1319
CviAII	CATG	7 cut(s)	397, 893, 982, 1121, 1158, 1172, 1384
CviQI	GTAC	5 cut(s)	154, 799, 978, 1216, 1319
DdeI	CTNAG	1 cut(s)	149
DraI	TTTAAA	1 cut(s)	1090
EaeI	YGGCCR	2 cut(s)	365, 393
EagI	CGGCCG	1 cut(s)	365
Eam1104I	CTCTTC	1 cut(s)	864
EarI	CTCTTC	1 cut(s)	864
EclXI	CGGCCG	1 cut(s)	365
Eco147I	AGGCCT	1 cut(s)	122
Eco24I	GRGCYC	1 cut(s)	383
Eco31I	GGTCTC	1 cut(s)	398
Eco32I	GATATC	1 cut(s)	1720
Eco47I	GGWCC	1 cut(s)	24
Eco52I	CGGCCG	1 cut(s)	365
Eco57I	CTGAAG	7 cut(s)	447, 885, 887, 1206, 1418, 1566, 1626
Eco81I	CCTNAGG	1 cut(s)	149
Eco88I	CYCGRG	2 cut(s)	239, 764
Eco91I	GGTNACC	1 cut(s)	561
EcoO65I	GGTNACC	1 cut(s)	561
EcoRI	GAATTC	1 cut(s)	759
EcoRII	CCWGG	5 cut(s)	20, 39, 54, 926, 1332
EcoRV	GATATC	1 cut(s)	1720
EcoT38I	GRGCYC	1 cut(s)	383
FaeI	CATG	7 cut(s)	400, 896, 985, 1124, 1161, 1175, 1387
FaqI	GGGAC	2 cut(s)	83, 212
FatI	CATG	7 cut(s)	396, 892, 981, 1120, 1157, 1171, 1383
FblI	GTMKAC	1 cut(s)	141
FriOI	GRGCYC	1 cut(s)	383
FspBI	CTAG	4 cut(s)	686, 941, 1278, 1732
GlaI	GCGC	7 cut(s)	130, 210, 249, 321, 363, 558, 1639
GsuI	CTGGAG	2 cut(s)	281, 480
HaeII	RGCGCY	2 cut(s)	212, 323
HaeIII	GGCC	6 cut(s)	122, 367, 381, 395, 434, 449
HapII	CCGG	7 cut(s)	8, 132, 168, 231, 1244, 1349, 1538
HgaI	GACGC	1 cut(s)	68
HhaI	GCGC	7 cut(s)	131, 211, 250, 322, 364, 559, 1640
Hin1I	GRCGYC	2 cut(s)	60, 138
Hin1II	CATG	7 cut(s)	400, 896, 985, 1124, 1161, 1175, 1387
Hin6I	GCGC	7 cut(s)	129, 209, 248, 320, 362, 557, 1638
HinP1I	GCGC	7 cut(s)	129, 209, 248, 320, 362, 557, 1638
HincII	GTYRAC	4 cut(s)	142, 175, 181, 1482
HindII	GTYRAC	4 cut(s)	142, 175, 181, 1482
HindIII	AAGCTT	1 cut(s)	341
HinfI	GANTC	6 cut(s)	164, 200, 543, 746, 778, 1505
HpaII	CCGG	7 cut(s)	8, 132, 168, 231, 1244, 1349, 1538
HphI	GGTGA	4 cut(s)	346, 555, 773, 1338
Hpy166II	GTNNAC	6 cut(s)	142, 175, 181, 1218, 1482, 1535
Hpy188I	TCNGA	8 cut(s)	575, 679, 906, 1081, 1186, 1381, 1398, 1469
Hpy8I	GTNNAC	6 cut(s)	142, 175, 181, 1218, 1482, 1535
Hpy99I	CGWCG	3 cut(s)	113, 140, 143
HpyAV	CCTTC	8 cut(s)	325, 343, 418, 911, 1105, 1118, 1163, 1225
HpyCH4III	ACNGT	1 cut(s)	656
HpyCH4IV	ACGT	4 cut(s)	111, 138, 177, 183
HpyF3I	CTNAG	1 cut(s)	149
HpySE526I	ACGT	4 cut(s)	111, 138, 177, 183
Hsp92I	GRCGYC	2 cut(s)	60, 138
Hsp92II	CATG	7 cut(s)	400, 896, 985, 1124, 1161, 1175, 1387
HspAI	GCGC	7 cut(s)	129, 209, 248, 320, 362, 557, 1638
KpnI	GGTACC	1 cut(s)	981
KroI	GCCGGC	1 cut(s)	131
KroNI	GCCGGC	1 cut(s)	133
LmnI	GCTCC	7 cut(s)	10, 262, 269, 283, 442, 1541, 1615
Lsp1109I	GCAGC	2 cut(s)	1258, 1597
LweI	GCATC	5 cut(s)	1040, 1079, 1258, 1656, 1690
MaeI	CTAG	4 cut(s)	686, 941, 1278, 1732
MaeII	ACGT	4 cut(s)	111, 138, 177, 183
MaeIII	GTNAC	4 cut(s)	188, 561, 586, 1433
MbiI	CCGCTC	1 cut(s)	13
MboII	GAAGA	7 cut(s)	461, 588, 851, 878, 960, 1210, 1411
MfeI	CAATTG	1 cut(s)	1363
MflI	RGATCY	5 cut(s)	712, 723, 897, 1006, 1705
MhlI	GDGCHC	3 cut(s)	267, 383, 1537
MluI	ACGCGT	1 cut(s)	219
MlyI	GAGTC	3 cut(s)	173, 194, 552
MmeI	TCCRAC	1 cut(s)	702
MreI	CGCCGGCG	1 cut(s)	131
MroNI	GCCGGC	1 cut(s)	131
MroXI	GAANNNNTTC	1 cut(s)	777
MseI	TTAA	8 cut(s)	90, 551, 936, 962, 1089, 1178, 1299, 1583
MspCI	CTTAAG	3 cut(s)	550, 1298, 1582
MspI	CCGG	7 cut(s)	8, 132, 168, 231, 1244, 1349, 1538
MspR9I	CCNGG	9 cut(s)	8, 22, 41, 56, 169, 928, 1244, 1334, 1539
MunI	CAATTG	1 cut(s)	1363
Mva1269I	GAATGC	1 cut(s)	1190
MvaI	CCWGG	5 cut(s)	22, 41, 56, 928, 1334
MvnI	CGCG	6 cut(s)	129, 221, 250, 317, 364, 559
NaeI	GCCGGC	1 cut(s)	133
NciI	CCSGG	4 cut(s)	8, 169, 1244, 1539
NgoMIV	GCCGGC	1 cut(s)	131
NlaIII	CATG	7 cut(s)	400, 896, 985, 1124, 1161, 1175, 1387
NlaIV	GGNNCC	3 cut(s)	381, 979, 1729
NmeAIII	GCCGAG	1 cut(s)	820
NmuCI	GTSAC	3 cut(s)	188, 561, 586
NotI	GCGGCCGC	1 cut(s)	365
NspI	RCATGY	1 cut(s)	1387
PaeR7I	CTCGAG	2 cut(s)	239, 764
PagI	TCATGA	1 cut(s)	1120
PceI	AGGCCT	1 cut(s)	122
PciI	ACATGT	1 cut(s)	1383
PcsI	WCGNNNNNNNCGW	1 cut(s)	1465
PctI	GAATGC	1 cut(s)	1190
PdiI	GCCGGC	1 cut(s)	133
PdmI	GAANNNNTTC	1 cut(s)	777
PfeI	GAWTC	3 cut(s)	746, 778, 1505
PflMI	CCANNNNNTGG	2 cut(s)	1060, 1499
PfoI	TCCNGGA	1 cut(s)	20
Ple19I	CGATCG	2 cut(s)	304, 874
PleI	GAGTC	3 cut(s)	172, 194, 551
PpsI	GAGTC	3 cut(s)	172, 194, 551
PscI	ACATGT	1 cut(s)	1383
Psp6I	CCWGG	5 cut(s)	20, 39, 54, 926, 1332
PspEI	GGTNACC	1 cut(s)	561
PspGI	CCWGG	5 cut(s)	20, 39, 54, 926, 1332
PspN4I	GGNNCC	3 cut(s)	381, 979, 1729
PspOMI	GGGCCC	1 cut(s)	379
PspPI	GGNCC	5 cut(s)	24, 379, 380, 432, 448
PspXI	VCTCGAGB	1 cut(s)	239
PsrI	GAACNNNNNNTAC	2 cut(s)	498, 530
PsuI	RGATCY	5 cut(s)	712, 723, 897, 1006, 1705
PvuI	CGATCG	2 cut(s)	304, 874
RsaI	GTAC	5 cut(s)	155, 800, 979, 1217, 1320
RsaNI	GTAC	5 cut(s)	154, 799, 978, 1216, 1319
SalI	GTCGAC	1 cut(s)	140
SaqAI	TTAA	8 cut(s)	90, 551, 936, 962, 1089, 1178, 1299, 1583
Sau96I	GGNCC	5 cut(s)	24, 379, 380, 432, 448
SchI	GAGTC	3 cut(s)	173, 194, 552
ScrFI	CCNGG	9 cut(s)	8, 22, 41, 56, 169, 928, 1244, 1334, 1539
SduI	GDGCHC	3 cut(s)	267, 383, 1537
SfaNI	GCATC	5 cut(s)	1040, 1079, 1258, 1656, 1690
SfcI	CTRYAG	1 cut(s)	696
Sfr274I	CTCGAG	2 cut(s)	239, 764
SgrAI	CRCCGGYG	1 cut(s)	131
SinI	GGWCC	1 cut(s)	24
SlaI	CTCGAG	2 cut(s)	239, 764
SmlI	CTYRAG	7 cut(s)	239, 550, 764, 1163, 1298, 1582, 1661
SmoI	CTYRAG	7 cut(s)	239, 550, 764, 1163, 1298, 1582, 1661
SseBI	AGGCCT	1 cut(s)	122
SspMI	CTAG	4 cut(s)	686, 941, 1278, 1732
StuI	AGGCCT	1 cut(s)	122
StyD4I	CCNGG	9 cut(s)	6, 20, 39, 54, 167, 926, 1242, 1332, 1537
TaaI	ACNGT	1 cut(s)	656
TaiI	ACGT	4 cut(s)	114, 141, 180, 186
TaqI	TCGA	9 cut(s)	30, 51, 117, 141, 240, 765, 1048, 1194, 1206
TatI	WGTACW	3 cut(s)	798, 1215, 1318
TauI	GCSGC	9 cut(s)	16, 65, 248, 320, 367, 370, 373, 395, 425
TfiI	GAWTC	3 cut(s)	746, 778, 1505
Tru1I	TTAA	8 cut(s)	90, 551, 936, 962, 1089, 1178, 1299, 1583
Tru9I	TTAA	8 cut(s)	90, 551, 936, 962, 1089, 1178, 1299, 1583
TscAI	CASTG	4 cut(s)	200, 484, 997, 1225
TseFI	GTSAC	3 cut(s)	188, 561, 586
TseI	GCWGC	2 cut(s)	1271, 1610
Tsp45I	GTSAC	3 cut(s)	188, 561, 586
TspDTI	ATGAA	6 cut(s)	829, 1109, 1124, 1136, 1137, 1497
TspGWI	ACGGA	3 cut(s)	282, 296, 1239
TspRI	CASTG	4 cut(s)	200, 484, 997, 1225
Van91I	CCANNNNNTGG	2 cut(s)	1060, 1499
Vha464I	CTTAAG	3 cut(s)	550, 1298, 1582
VneI	GTGCAC	1 cut(s)	1533
VpaK11BI	GGWCC	1 cut(s)	24
XapI	RAATTY	3 cut(s)	325, 759, 1409
XbaI	TCTAGA	1 cut(s)	1277
XceI	RCATGY	1 cut(s)	1387
XhoI	CTCGAG	2 cut(s)	239, 764
XmiI	GTMKAC	1 cut(s)	141
XmnI	GAANNNNTTC	1 cut(s)	777
XspI	CTAG	4 cut(s)	686, 941, 1278, 1732
ZraI	GACGTC	1 cut(s)	139

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.