Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0005745

Physical Location & Seq

Genomic Coordinates Reverse (-)

77583421 .. 77587129

Gene Structure 3709 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG547300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1362 bp

ATGTCCCCGGAGCGGCAATCCTGGACCATCGATCCCGACCTGGACGGGATCGACCTCGACGCCGCCGACTTCGCCTCCTCCCTCCCCATTAAAAAAGTCCCAAACGGCGACGTTTTCGAGGCCTCACGCGCCGGCGACGTCGACCGCCTCAGGTACTTGTTAGAGTCCGGAGTCAACGTCAACGCGCGTGACCAGTGGGACTCGGTGGCGCTCTACTACGCGTGCCTCGCCGGACACCTCGAGGCGGCGCGTATGTTGCTGGAGAGCGGAGCTATATGCACGGAGCATACTTTTGACGGCGATCGGTGTCATTACGCGGCGCTGAATTTGAAGGTGAGGAAGCTTTTGAAGGCGTTTGAGGCGCGGCCGCCGCCGTTGGGGCCGTTGCAGGCGGCGATGAGAGAGACGTTCTTGGGCTGTGCGGCTAATTGGGCCTATTTGGAGCAGGCCCAGTTTGAAACTTCAGGTCTTCCAGCCAGTGATGGATATTTTCCTCCAGATGTGGTATTTTTTGTTCAAGGGAGAGCCATTGAAGCTCATAGAGTCATCTTAAGTGCTCGGTCACCATTTTTCAGAAGAAAGTTTGTGACTGATTGGAAAGAACGCAGGGAAGTGAGATTTTCAAGGGAAAAGTTGTCATATCCTGCTCTATACAGTCTCATCCAATTCTTTTACTCCGACAGACTAGAAGTTGCTGTAGATGATATGGAGGAACTTGTGAGGATCTGCAAAGTATGTAAATGTGAATCTTTACAAAGAATTCTCGAGAAAGAATTGATTCACCAAAAGTATGCCGAGTACAAAGCATTGAGAGACATAGACAGCTCTATAAAACGCTTCATCTTACAAGGTGTCTCTCTTCCTGAAGAAGATCGGCTTCCTGCAACTTTGCATGAGATCCTTCAGATTTCCCTTGCCAATTCCACCAGGGAACTTAACCTAGATAATGGTGTCAAAGAATTAACATCTTCTGTGCGTACCATGCAATTCAGTGATTTTGTAGAGGATCTTGCAGATGTTTGTGTAAAAGTTGATAAAAAGAGTTTTCGATGCCATCAAGTGGTTTTAGCATCAAGGTCGGAGTATTTTAAAGCAAGATTATCCCGTATGAAGGACTTTCATGAAGGAAAAAGTGATATACCTGTTCATACCCTTCCATGTCTTGAGGAACATGATTTAAGCTCTGAAGCATTCGAGAAGATGATCGAGTATATGTACACTGACGGATTGAAGGATATAGACCCGGATCAGGTAGATTATATGTTAATAGGAGCTTCTGACATTGCCAGCAAGAAGAAAAAAAATCCTGTGATGTTATTTTTATTTCTGAAAAGAACCACACTGGCTTTTCCTGTGCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0019005 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0030162 GO:0030163 GO:0031461 GO:0031625 GO:0032991 GO:0043161 GO:0043170 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044424 GO:0044464 GO:0050789 GO:0051171 GO:0051246 GO:0051603 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank_4 Ank_5 BTB

Protein Analysis

453

Amino Acids

51.73

Weight (kDa)

5.62

Isoelectric Point (pI)

47.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_4	PF13637	39 - 87	7.2e-09	Ankyrin repeats (many copies)
Ank_2	PF12796	41 - 108	5.6e-07	Ankyrin repeats (3 copies)
BTB	PF00651	166 - 262	7.2e-16	BTB/POZ domain
BTB	PF00651	336 - 422	6.7e-13	BTB/POZ domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005745)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04740 AT2G04740 AT2G04740 AT2G04740
fragaria_vesca	FvH4_6g41550 FvH4_6g41550 FvH4_6g41550 FvH4_6g41550
malus_domestica	MD17G1109800.v1.1
prunus_persica	Prupe.3G205300_v2.0.a1
pyrus_communis	pycom17g10210
rosa_chinensis	RchiOBHm_Chr2g0157231
rosa_laevigata	RLG00000020973
rosa_multiflora	Rmu_sc0006282.1_g000006 Rmu_sc0018717.1_g000001 Rmu_sc0028571.1_g000001
rosa_roxburghii	Rroxscaffold_2G00092390
rosa_rugosa	Rorug02G0458600 Rorug02G0458700 Rorug02G0458700 Rorug02G0458800 Rorug02G0458900
rosa_samantha	Rh2AG524000 Rh2BG538400 Rh2CG508800 Rh2DG547300
rosa_wichuraiana	Rw2G043340 Rw2G043400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	141
AbsI	CCTCGAGG	1 cut(s)	239
AccB7I	CCANNNNNTGG	1 cut(s)	1060
AccBSI	CCGCTC	2 cut(s)	13, 267
AccI	GTMKAC	1 cut(s)	141
AccII	CGCG	7 cut(s)	129, 185, 187, 221, 250, 317, 364
AccIII	TCCGGA	1 cut(s)	167
AclWI	GGATC	6 cut(s)	26, 56, 731, 892, 1014, 1254
AcoI	YGGCCR	1 cut(s)	365
AcsI	RAATTY	2 cut(s)	325, 759
AcuI	CTGAAG	4 cut(s)	447, 885, 887, 1206
AcyI	GRCGYC	2 cut(s)	60, 138
AfaI	GTAC	4 cut(s)	155, 800, 979, 1217
AfiI	CCNNNNNNNGG	6 cut(s)	12, 244, 377, 1060, 1111, 1249
AflII	CTTAAG	1 cut(s)	550
AflIII	ACRYGT	1 cut(s)	219
AgsI	TTSAA	7 cut(s)	331, 349, 458, 518, 533, 624, 1231
AjnI	CCWGG	3 cut(s)	20, 39, 926
AluBI	AGCT	6 cut(s)	272, 343, 536, 825, 1182, 1274
AluI	AGCT	6 cut(s)	272, 343, 536, 825, 1182, 1274
Alw21I	GWGCWC	2 cut(s)	559, 1359
Alw26I	GTCTC	4 cut(s)	398, 662, 807, 859
AlwI	GGATC	6 cut(s)	26, 56, 731, 892, 1014, 1254
Ama87I	CYCGRG	2 cut(s)	239, 764
Aor13HI	TCCGGA	1 cut(s)	167
AoxI	GGCC	5 cut(s)	120, 365, 380, 432, 447
ApoI	RAATTY	2 cut(s)	325, 759
Asp700I	GAANNNNTTC	1 cut(s)	777
AspLEI	GCGC	6 cut(s)	131, 187, 211, 250, 322, 364
AspS9I	GGNCC	4 cut(s)	24, 380, 432, 448
AsuC2I	CCSGG	2 cut(s)	8, 1244
AsuHPI	GGTGA	3 cut(s)	346, 555, 773
AvaI	CYCGRG	2 cut(s)	239, 764
AvaII	GGWCC	1 cut(s)	24
AxyI	CCTNAGG	1 cut(s)	149
BbsI	GAAGAC	1 cut(s)	461
Bbv12I	GWGCWC	2 cut(s)	559, 1359
BccI	CCATC	3 cut(s)	35, 476, 1062
BceAI	ACGGC	4 cut(s)	121, 313, 358, 367
BcgI	CGANNNNNNTGC	2 cut(s)	1059, 1093
BciT130I	CCWGG	3 cut(s)	22, 41, 928
BcnI	CCSGG	2 cut(s)	8, 1244
BcoDI	GTCTC	4 cut(s)	398, 662, 807, 859
BfaI	CTAG	2 cut(s)	686, 941
BfmI	CTRYAG	1 cut(s)	696
BfoI	RGCGCY	2 cut(s)	212, 323
BfrI	CTTAAG	1 cut(s)	550
BglI	GCCNNNNNGGC	1 cut(s)	379
BisI	GCNGC	9 cut(s)	14, 63, 246, 318, 365, 368, 371, 393, 423
BlsI	GCNGC	9 cut(s)	15, 64, 247, 319, 366, 369, 372, 394, 424
Bme1390I	CCNGG	5 cut(s)	8, 22, 41, 928, 1244
Bme18I	GGWCC	1 cut(s)	24
BmeT110I	CYCGRG	2 cut(s)	239, 764
BmgT120I	GGNCC	4 cut(s)	24, 380, 432, 448
BmiI	GGNNCC	1 cut(s)	381
BmrFI	CCNGG	5 cut(s)	8, 22, 41, 928, 1244
BmrI	ACTGGG	1 cut(s)	445
BmsI	GCATC	2 cut(s)	1040, 1079
BmuI	ACTGGG	1 cut(s)	445
BpiI	GAAGAC	1 cut(s)	461
BpmI	CTGGAG	2 cut(s)	281, 480
BpuEI	CTTGAG	1 cut(s)	1184
BpuMI	CCSGG	2 cut(s)	8, 1244
Bsa29I	ATCGAT	1 cut(s)	30
BsaHI	GRCGYC	2 cut(s)	60, 138
BsaJI	CCNNGG	2 cut(s)	6, 927
BsaWI	WCCGGW	1 cut(s)	167
BsaXI	ACNNNNNCTCC	4 cut(s)	59, 89, 162, 192
Bsc4I	CCNNNNNNNGG	6 cut(s)	12, 244, 377, 1060, 1111, 1249
Bse118I	RCCGGY	1 cut(s)	131
Bse1I	ACTGG	4 cut(s)	193, 451, 477, 1347
Bse21I	CCTNAGG	1 cut(s)	149
Bse3DI	GCAATG	1 cut(s)	1281
BseAI	TCCGGA	1 cut(s)	167
BseBI	CCWGG	3 cut(s)	22, 41, 928
BseCI	ATCGAT	1 cut(s)	30
BseDI	CCNNGG	2 cut(s)	6, 927
BseGI	GGATG	1 cut(s)	660
BseLI	CCNNNNNNNGG	6 cut(s)	12, 244, 377, 1060, 1111, 1249
BseMI	GCAATG	1 cut(s)	1281
BseMII	CTCAG	1 cut(s)	163
BseNI	ACTGG	4 cut(s)	193, 451, 477, 1347
BseRI	GAGGAG	1 cut(s)	67
BseX3I	CGGCCG	1 cut(s)	365
Bsh1236I	CGCG	7 cut(s)	129, 185, 187, 221, 250, 317, 364
Bsh1285I	CGRYCG	3 cut(s)	145, 304, 368
BshFI	GGCC	5 cut(s)	122, 367, 382, 434, 449
BshVI	ATCGAT	1 cut(s)	30
BsiEI	CGRYCG	3 cut(s)	145, 304, 368
BsiHKAI	GWGCWC	2 cut(s)	559, 1359
BsiHKCI	CYCGRG	2 cut(s)	239, 764
BsiSI	CCGG	5 cut(s)	8, 132, 168, 231, 1244
BslFI	GGGAC	2 cut(s)	83, 212
BslI	CCNNNNNNNGG	6 cut(s)	12, 244, 377, 1060, 1111, 1249
BsmAI	GTCTC	4 cut(s)	398, 662, 807, 859
BsmBI	CGTCTC	1 cut(s)	398
BsmFI	GGGAC	2 cut(s)	83, 212
BsmI	GAATGC	1 cut(s)	1190
BsnI	GGCC	5 cut(s)	122, 367, 382, 434, 449
BsoBI	CYCGRG	2 cut(s)	239, 764
Bsp1286I	GDGCHC	2 cut(s)	559, 1359
Bsp13I	TCCGGA	1 cut(s)	167
Bsp1407I	TGTACA	1 cut(s)	1215
Bsp143I	GATC	9 cut(s)	31, 48, 301, 723, 871, 897, 1006, 1203, 1246
BspANI	GGCC	5 cut(s)	122, 367, 382, 434, 449
BspCNI	CTCAG	1 cut(s)	162
BspDI	ATCGAT	1 cut(s)	30
BspEI	TCCGGA	1 cut(s)	167
BspFNI	CGCG	7 cut(s)	129, 185, 187, 221, 250, 317, 364
BspHI	TCATGA	1 cut(s)	1120
BspLI	GGNNCC	1 cut(s)	381
BspPI	GGATC	6 cut(s)	26, 56, 731, 892, 1014, 1254
BspTI	CTTAAG	1 cut(s)	550
BsrBI	CCGCTC	2 cut(s)	13, 267
BsrDI	GCAATG	1 cut(s)	1281
BsrFI	RCCGGY	1 cut(s)	131
BsrGI	TGTACA	1 cut(s)	1215
BsrI	ACTGG	4 cut(s)	193, 451, 477, 1347
BssAI	RCCGGY	1 cut(s)	131
BssECI	CCNNGG	2 cut(s)	6, 927
BssMI	GATC	9 cut(s)	31, 48, 301, 723, 871, 897, 1006, 1203, 1246
BssNI	GRCGYC	2 cut(s)	60, 138
Bst2UI	CCWGG	3 cut(s)	22, 41, 928
Bst4CI	ACNGT	1 cut(s)	656
Bst6I	CTCTTC	1 cut(s)	864
BstACI	GRCGYC	2 cut(s)	60, 138
BstAFI	CTTAAG	1 cut(s)	550
BstAUI	TGTACA	1 cut(s)	1215
BstC8I	GCNNGC	5 cut(s)	133, 223, 390, 447, 1288
BstDEI	CTNAG	1 cut(s)	149
BstEII	GGTNACC	1 cut(s)	561
BstF5I	GGATG	1 cut(s)	660
BstFNI	CGCG	7 cut(s)	129, 185, 187, 221, 250, 317, 364
BstH2I	RGCGCY	2 cut(s)	212, 323
BstHHI	GCGC	6 cut(s)	131, 187, 211, 250, 322, 364
BstKTI	GATC	9 cut(s)	34, 51, 304, 726, 874, 900, 1009, 1206, 1249
BstMAI	GTCTC	4 cut(s)	398, 662, 807, 859
BstMBI	GATC	9 cut(s)	31, 48, 301, 723, 871, 897, 1006, 1203, 1246
BstMCI	CGRYCG	3 cut(s)	145, 304, 368
BstNI	CCWGG	3 cut(s)	22, 41, 928
BstPI	GGTNACC	1 cut(s)	561
BstSCI	CCNGG	5 cut(s)	6, 20, 39, 926, 1242
BstSFI	CTRYAG	1 cut(s)	696
BstUI	CGCG	7 cut(s)	129, 185, 187, 221, 250, 317, 364
BstV2I	GAAGAC	1 cut(s)	461
BstX2I	RGATCY	3 cut(s)	723, 897, 1006
BstYI	RGATCY	3 cut(s)	723, 897, 1006
BstZI	CGGCCG	1 cut(s)	365
Bsu15I	ATCGAT	1 cut(s)	30
Bsu36I	CCTNAGG	1 cut(s)	149
BsuRI	GGCC	5 cut(s)	122, 367, 382, 434, 449
BsuTUI	ATCGAT	1 cut(s)	30
BtgZI	GCGATG	1 cut(s)	410
BtsCI	GGATG	1 cut(s)	660
BtsIMutI	CAGTG	5 cut(s)	200, 484, 997, 1218, 1340
Cac8I	GCNNGC	5 cut(s)	133, 223, 390, 447, 1288
CciI	TCATGA	1 cut(s)	1120
CciNI	GCGGCCGC	1 cut(s)	365
CfoI	GCGC	6 cut(s)	131, 187, 211, 250, 322, 364
Cfr10I	RCCGGY	1 cut(s)	131
Cfr13I	GGNCC	4 cut(s)	24, 380, 432, 448
ClaI	ATCGAT	1 cut(s)	30
CseI	GACGC	1 cut(s)	68
Csp6I	GTAC	4 cut(s)	154, 799, 978, 1216
CviAII	CATG	5 cut(s)	893, 982, 1121, 1158, 1172
CviQI	GTAC	4 cut(s)	154, 799, 978, 1216
DdeI	CTNAG	1 cut(s)	149
DpnI	GATC	9 cut(s)	33, 50, 303, 725, 873, 899, 1008, 1205, 1248
DpnII	GATC	9 cut(s)	31, 48, 301, 723, 871, 897, 1006, 1203, 1246
DraI	TTTAAA	1 cut(s)	1090
EaeI	YGGCCR	1 cut(s)	365
EagI	CGGCCG	1 cut(s)	365
Eam1104I	CTCTTC	1 cut(s)	864
EarI	CTCTTC	1 cut(s)	864
EclXI	CGGCCG	1 cut(s)	365
Eco147I	AGGCCT	1 cut(s)	122
Eco47I	GGWCC	1 cut(s)	24
Eco52I	CGGCCG	1 cut(s)	365
Eco57I	CTGAAG	4 cut(s)	447, 885, 887, 1206
Eco81I	CCTNAGG	1 cut(s)	149
Eco88I	CYCGRG	2 cut(s)	239, 764
Eco91I	GGTNACC	1 cut(s)	561
EcoO65I	GGTNACC	1 cut(s)	561
EcoRI	GAATTC	1 cut(s)	759
EcoRII	CCWGG	3 cut(s)	20, 39, 926
Esp3I	CGTCTC	1 cut(s)	398
FaeI	CATG	5 cut(s)	896, 985, 1124, 1161, 1175
FalI	AAGNNNNNCTT	2 cut(s)	861, 893
FaqI	GGGAC	2 cut(s)	83, 212
FatI	CATG	5 cut(s)	892, 981, 1120, 1157, 1171
FblI	GTMKAC	1 cut(s)	141
Fnu4HI	GCNGC	9 cut(s)	14, 63, 246, 318, 365, 368, 371, 393, 423
FokI	GGATG	1 cut(s)	647
Fsp4HI	GCNGC	9 cut(s)	14, 63, 246, 318, 365, 368, 371, 393, 423
FspBI	CTAG	2 cut(s)	686, 941
GlaI	GCGC	6 cut(s)	130, 186, 210, 249, 321, 363
GluI	GCNGC	9 cut(s)	14, 63, 246, 318, 365, 368, 371, 393, 423
GsuI	CTGGAG	2 cut(s)	281, 480
HaeII	RGCGCY	2 cut(s)	212, 323
HaeIII	GGCC	5 cut(s)	122, 367, 382, 434, 449
HapII	CCGG	5 cut(s)	8, 132, 168, 231, 1244
HgaI	GACGC	1 cut(s)	68
HhaI	GCGC	6 cut(s)	131, 187, 211, 250, 322, 364
Hin1I	GRCGYC	2 cut(s)	60, 138
Hin1II	CATG	5 cut(s)	896, 985, 1124, 1161, 1175
Hin6I	GCGC	6 cut(s)	129, 185, 209, 248, 320, 362
HinP1I	GCGC	6 cut(s)	129, 185, 209, 248, 320, 362
HincII	GTYRAC	3 cut(s)	142, 175, 181
HindII	GTYRAC	3 cut(s)	142, 175, 181
HindIII	AAGCTT	1 cut(s)	341
HinfI	GANTC	6 cut(s)	164, 171, 200, 543, 746, 778
HpaII	CCGG	5 cut(s)	8, 132, 168, 231, 1244
HphI	GGTGA	3 cut(s)	346, 555, 773
Hpy166II	GTNNAC	4 cut(s)	142, 175, 181, 1218
Hpy188I	TCNGA	7 cut(s)	575, 679, 906, 1081, 1186, 1279, 1329
Hpy188III	TCNNGA	9 cut(s)	35, 168, 497, 764, 766, 863, 1121, 1163, 1195
Hpy8I	GTNNAC	4 cut(s)	142, 175, 181, 1218
Hpy99I	CGWCG	4 cut(s)	62, 113, 140, 143
HpyAV	CCTTC	7 cut(s)	325, 343, 911, 1105, 1118, 1163, 1225
HpyCH4III	ACNGT	1 cut(s)	656
HpyCH4IV	ACGT	4 cut(s)	111, 138, 177, 407
HpyCH4V	TGCA	7 cut(s)	279, 388, 729, 884, 892, 985, 1013
HpyF3I	CTNAG	1 cut(s)	149
HpySE526I	ACGT	4 cut(s)	111, 138, 177, 407
Hsp92I	GRCGYC	2 cut(s)	60, 138
Hsp92II	CATG	5 cut(s)	896, 985, 1124, 1161, 1175
HspAI	GCGC	6 cut(s)	129, 185, 209, 248, 320, 362
Kpn2I	TCCGGA	1 cut(s)	167
KroI	GCCGGC	1 cut(s)	131
KroNI	GCCGGC	1 cut(s)	133
Kzo9I	GATC	9 cut(s)	31, 48, 301, 723, 871, 897, 1006, 1203, 1246
LmnI	GCTCC	5 cut(s)	10, 269, 283, 442, 1271
LweI	GCATC	2 cut(s)	1040, 1079
MaeI	CTAG	2 cut(s)	686, 941
MaeII	ACGT	4 cut(s)	111, 138, 177, 407
MaeIII	GTNAC	3 cut(s)	188, 561, 586
MalI	GATC	9 cut(s)	33, 50, 303, 725, 873, 899, 1008, 1205, 1248
MbiI	CCGCTC	2 cut(s)	13, 267
MboI	GATC	9 cut(s)	31, 48, 301, 723, 871, 897, 1006, 1203, 1246
MboII	GAAGA	8 cut(s)	461, 588, 851, 878, 881, 960, 1210, 1306
MflI	RGATCY	3 cut(s)	723, 897, 1006
MhlI	GDGCHC	2 cut(s)	559, 1359
MluCI	AATT	8 cut(s)	325, 427, 665, 759, 773, 919, 959, 986
MluI	ACGCGT	1 cut(s)	219
MlyI	GAGTC	4 cut(s)	173, 180, 194, 552
MmeI	TCCRAC	2 cut(s)	702, 1059
MreI	CGCCGGCG	1 cut(s)	131
MroI	TCCGGA	1 cut(s)	167
MroNI	GCCGGC	1 cut(s)	131
MroXI	GAANNNNTTC	1 cut(s)	777
MseI	TTAA	7 cut(s)	90, 551, 936, 962, 1089, 1178, 1265
MspCI	CTTAAG	1 cut(s)	550
MspI	CCGG	5 cut(s)	8, 132, 168, 231, 1244
MspR9I	CCNGG	5 cut(s)	8, 22, 41, 928, 1244
Mva1269I	GAATGC	1 cut(s)	1190
MvaI	CCWGG	3 cut(s)	22, 41, 928
MvnI	CGCG	7 cut(s)	129, 185, 187, 221, 250, 317, 364
NaeI	GCCGGC	1 cut(s)	133
NciI	CCSGG	2 cut(s)	8, 1244
NdeII	GATC	9 cut(s)	31, 48, 301, 723, 871, 897, 1006, 1203, 1246
NgoMIV	GCCGGC	1 cut(s)	131
NlaIII	CATG	5 cut(s)	896, 985, 1124, 1161, 1175
NlaIV	GGNNCC	1 cut(s)	381
NmeAIII	GCCGAG	1 cut(s)	820
NmuCI	GTSAC	3 cut(s)	188, 561, 586
NotI	GCGGCCGC	1 cut(s)	365
PaeR7I	CTCGAG	2 cut(s)	239, 764
PagI	TCATGA	1 cut(s)	1120
PceI	AGGCCT	1 cut(s)	122
PcsI	WCGNNNNNNNCGW	1 cut(s)	63
PctI	GAATGC	1 cut(s)	1190
PdiI	GCCGGC	1 cut(s)	133
PdmI	GAANNNNTTC	1 cut(s)	777
PfeI	GAWTC	2 cut(s)	746, 778
PflMI	CCANNNNNTGG	1 cut(s)	1060
PfoI	TCCNGGA	1 cut(s)	20
PkrI	GCNGC	9 cut(s)	15, 64, 247, 319, 366, 369, 372, 394, 424
Ple19I	CGATCG	1 cut(s)	304
PleI	GAGTC	4 cut(s)	172, 179, 194, 551
PpsI	GAGTC	4 cut(s)	172, 179, 194, 551
Psp6I	CCWGG	3 cut(s)	20, 39, 926
PspEI	GGTNACC	1 cut(s)	561
PspGI	CCWGG	3 cut(s)	20, 39, 926
PspN4I	GGNNCC	1 cut(s)	381
PspPI	GGNCC	4 cut(s)	24, 380, 432, 448
PspXI	VCTCGAGB	1 cut(s)	239
PsrI	GAACNNNNNNTAC	2 cut(s)	498, 530
PsuI	RGATCY	3 cut(s)	723, 897, 1006
PvuI	CGATCG	1 cut(s)	304
RsaI	GTAC	4 cut(s)	155, 800, 979, 1217
RsaNI	GTAC	4 cut(s)	154, 799, 978, 1216
SalI	GTCGAC	1 cut(s)	140
SaqAI	TTAA	7 cut(s)	90, 551, 936, 962, 1089, 1178, 1265
SatI	GCNGC	9 cut(s)	14, 63, 246, 318, 365, 368, 371, 393, 423
Sau3AI	GATC	9 cut(s)	31, 48, 301, 723, 871, 897, 1006, 1203, 1246
Sau96I	GGNCC	4 cut(s)	24, 380, 432, 448
SchI	GAGTC	4 cut(s)	173, 180, 194, 552
ScrFI	CCNGG	5 cut(s)	8, 22, 41, 928, 1244
SduI	GDGCHC	2 cut(s)	559, 1359
SfaNI	GCATC	2 cut(s)	1040, 1079
SfcI	CTRYAG	1 cut(s)	696
Sfr274I	CTCGAG	2 cut(s)	239, 764
SgrAI	CRCCGGYG	1 cut(s)	131
SinI	GGWCC	1 cut(s)	24
SlaI	CTCGAG	2 cut(s)	239, 764
SmlI	CTYRAG	4 cut(s)	239, 550, 764, 1163
SmoI	CTYRAG	4 cut(s)	239, 550, 764, 1163
Sse9I	AATT	8 cut(s)	325, 427, 665, 759, 773, 919, 959, 986
SseBI	AGGCCT	1 cut(s)	122
SspMI	CTAG	2 cut(s)	686, 941
StuI	AGGCCT	1 cut(s)	122
StyD4I	CCNGG	5 cut(s)	6, 20, 39, 926, 1242
TaaI	ACNGT	1 cut(s)	656
TaiI	ACGT	4 cut(s)	114, 141, 180, 410
TaqII	GACCGA	1 cut(s)	549
TasI	AATT	8 cut(s)	325, 427, 665, 759, 773, 919, 959, 986
TatI	WGTACW	2 cut(s)	798, 1215
TauI	GCSGC	9 cut(s)	16, 65, 248, 320, 367, 370, 373, 395, 425
TfiI	GAWTC	2 cut(s)	746, 778
Tru1I	TTAA	7 cut(s)	90, 551, 936, 962, 1089, 1178, 1265
Tru9I	TTAA	7 cut(s)	90, 551, 936, 962, 1089, 1178, 1265
TscAI	CASTG	5 cut(s)	200, 484, 997, 1225, 1347
TseFI	GTSAC	3 cut(s)	188, 561, 586
Tsp45I	GTSAC	3 cut(s)	188, 561, 586
TspDTI	ATGAA	5 cut(s)	829, 1109, 1124, 1136, 1137
TspGWI	ACGGA	2 cut(s)	296, 1239
TspRI	CASTG	5 cut(s)	200, 484, 997, 1225, 1347
Van91I	CCANNNNNTGG	1 cut(s)	1060
Vha464I	CTTAAG	1 cut(s)	550
VpaK11BI	GGWCC	1 cut(s)	24
XapI	RAATTY	2 cut(s)	325, 759
XhoI	CTCGAG	2 cut(s)	239, 764
XmiI	GTMKAC	1 cut(s)	141
XmnI	GAANNNNTTC	1 cut(s)	777
XspI	CTAG	2 cut(s)	686, 941
ZraI	GACGTC	1 cut(s)	139

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.