Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0005745

Physical Location & Seq

Genomic Coordinates Forward (+)

59084938 .. 59090067

Gene Structure 5130 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0458800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1737 bp

ATGACATGTATAGATTGGTGGAATGGTGGGAGTAGTTTGGAGATTAACAAGATGAAACCCAACAAAGTAACCTTTTCCAAGGACATGAAGAATGATGTCCCAACAACATTGCTAATCTTTCTGTGTCAGTGGGTTTTCATTATGTTGTTTCTCCCTTCCTGTGCCTCTGCTTCTTGTGATCAAGTGGATCGTGACGCTCTCTTATCCTTAGATTTCAAGGCCTCATCACCATTGAATTGGTCTGCTTCCTCGGACTGTTGCCTTTGGGAAGGAATACTCTGTGGTCCGGATGATCGAGTCCTCCATCTATGGTTGCCTGGGAGAGGCTTAAGCGGTTCAGTCTCCCCAGCTATCACCAACCTCACATATCTCACCCACCTCAATCTTTCCCAGAATACCCTGTTGGGTGTACTTCCAGATGGCTTGTTTTCCTTCCTCTTTCACCTCCAAGTTCTAGACTTGAGTTTCAATCGTCTCAACGGCCACTTACCAATTTCATCTAATGAAGCCAGCAAGCTTCAGATTGTAGACTTGTCCAGCAATTACTTCAATGGAACAATCCCATCTGTGACTTCAGGCTCTCTAACCATTTTCAATGTCAGCAAAAACAGCTTTGCTGGCTCCATTCCCATCTCTGTTTTCTGCAAAAATGGCAGCAATCACAACAACCTCACCTTTGTGGACTTATCCTTCAACAGATTTACTGATCCAATTCCTACTGGACTCGCCTCTTGTTCCAAGCTCCAGGTCTTCCGCGCAGGCTTCAATGCTCTCACTGGTCATCTCCCTGATGACATTTTTGGCCTTGCTGATCTCCAACAGCTTTCTCTGCCCGTCAATCGCTTATCAGGACCCATTGGCAATGGCATTGTAGGTTTAACCAATCTGAAGATCCTGGAGCTCTACTCAAACCAATTCGTGGGGGATATACCCAGCCAAATTGGTAACCTTGTCAGGTTGGAGAAGCTGGTCCTCCACAGCAACAACCTCACAGGTGCCATACCTCCATCTCTTACCAACTGCACAAATCTGTCCACCTTGAATTTGCGGGTCAACAACTTAACAGGAGAGCTCTCCGCCTTCAATTTCTCTACGTTCCAACTCCTCACCACACTTGACCTTGGCAACAATAACTTCACTGGTAAGTTACCGCAAAGCCTCTACTCGTGCAAGTCACTGACAGCAATTAGATTGGCCAGCAATAATCTCCAAGGGCAGATATTACCTGAAATAGTTGCACTAGAATCCCTTGCTTTCCTCTCCATCTCTAACAACAACTTAACCAATGCCACCGGGGCCTTTATGGTTCTAATGGGTTGCAAGAATCTCACCACTCTGGTCCTCACCAAGAGTTTTCTGTTGGAACCTTTGCCAAATGATGAAAGCCTAGCAGACCTAGATGGATTTCACAAACTCCAAGTTCTTGCTATGGGTGGTTGCAAGTTTACAGGTCAAGTGCCCACCTGGATAGCCAAGCTTAAAAGCCTTCAAGTCTTGGACCTGGCATTTAACCTTATAACCGGCTCTATTCCAGGTTGGTTGGGTAGTCTACCCAAGCTATTCTACATGGACTTGTCCAATAATCTTCTTACGGGAGTATTCCCTGAGGAGCTCTGCAGGATGCCATCTTTGACATCAAAAGAGGCCGATGATAAAGTGGAAAGTGTTGTAGTATACATGAATCATATTGTAGTATATATGAGTCATAGTATAAATGTCTATATCATGTATAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0019005 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0030162 GO:0030163 GO:0031461 GO:0031625 GO:0032991 GO:0043161 GO:0043170 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044424 GO:0044464 GO:0050789 GO:0051171 GO:0051246 GO:0051603 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank_4 Ank_5 BTB

Protein Analysis

578

Amino Acids

63.08

Weight (kDa)

5.93

Isoelectric Point (pI)

30.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_14	PF23598	260 - 354	5.1e-06	Leucine-rich repeat region
LRR_8	PF13855	342 - 403	4.1e-06	Leucine rich repeat
LRR_14	PF23598	367 - 544	3.7e-07	Leucine-rich repeat region
LRR_8	PF13855	471 - 530	2.6e-09	Leucine rich repeat
LRR_8	PF13855	495 - 545	2e-09	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0005745)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04740 AT2G04740 AT2G04740 AT2G04740
fragaria_vesca	FvH4_6g41550 FvH4_6g41550 FvH4_6g41550 FvH4_6g41550
malus_domestica	MD17G1109800.v1.1
prunus_persica	Prupe.3G205300_v2.0.a1
pyrus_communis	pycom17g10210
rosa_chinensis	RchiOBHm_Chr2g0157231
rosa_laevigata	RLG00000020973
rosa_multiflora	Rmu_sc0006282.1_g000006 Rmu_sc0018717.1_g000001 Rmu_sc0028571.1_g000001
rosa_roxburghii	Rroxscaffold_2G00092390
rosa_rugosa	Rorug02G0458600 Rorug02G0458700 Rorug02G0458700 Rorug02G0458800 Rorug02G0458900
rosa_samantha	Rh2AG524000 Rh2BG538400 Rh2CG508800 Rh2DG547300
rosa_wichuraiana	Rw2G043340 Rw2G043400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1517
AccB1I	GGYRCC	1 cut(s)	995
AccB7I	CCANNNNNTGG	1 cut(s)	919
AccI	GTMKAC	3 cut(s)	528, 1549, 1674
AccII	CGCG	1 cut(s)	756
AccIII	TCCGGA	1 cut(s)	286
AciI	CCGC	5 cut(s)	333, 754, 1048, 1077, 1151
AclWI	GGATC	3 cut(s)	195, 701, 886
AcoI	YGGCCR	2 cut(s)	481, 1194
AcsI	RAATTY	1 cut(s)	1042
AcuI	CTGAAG	3 cut(s)	503, 558, 908
AfaI	GTAC	1 cut(s)	411
AfiI	CCNNNNNNNGG	2 cut(s)	323, 919
AflII	CTTAAG	1 cut(s)	328
AflIII	ACRYGT	1 cut(s)	5
AjnI	CCWGG	6 cut(s)	316, 744, 894, 1463, 1500, 1531
AjuI	GAANNNNNNNTTGG	2 cut(s)	386, 418
AleI	CACNNNNGTG	1 cut(s)	677
Alw21I	GWGCWC	3 cut(s)	903, 1074, 1614
Alw26I	GTCTC	2 cut(s)	346, 479
AlwI	GGATC	3 cut(s)	195, 701, 886
Aor13HI	TCCGGA	1 cut(s)	286
AoxI	GGCC	6 cut(s)	219, 481, 802, 1194, 1296, 1644
ApeKI	GCWGC	1 cut(s)	654
ApoI	RAATTY	1 cut(s)	1042
AspLEI	GCGC	1 cut(s)	758
AspS9I	GGNCC	6 cut(s)	284, 851, 970, 1296, 1339, 1498
AsuC2I	CCSGG	1 cut(s)	1294
AsuHPI	GGTGA	8 cut(s)	219, 346, 364, 434, 664, 1099, 1321, 1336
AvaII	GGWCC	5 cut(s)	284, 851, 970, 1339, 1498
AxyI	CCTNAGG	1 cut(s)	1605
BaeGI	GKGCMC	1 cut(s)	1461
BalI	TGGCCA	1 cut(s)	1196
BanI	GGYRCC	1 cut(s)	995
BanII	GRGCYC	3 cut(s)	903, 1074, 1614
BauI	CACGAG	1 cut(s)	1165
BbsI	GAAGAC	1 cut(s)	742
Bbv12I	GWGCWC	3 cut(s)	903, 1074, 1614
BbvI	GCAGC	1 cut(s)	666
BccI	CCATC	8 cut(s)	312, 413, 571, 638, 1015, 1271, 1394, 1633
BceAI	ACGGC	1 cut(s)	496
BciT130I	CCWGG	6 cut(s)	318, 746, 896, 1465, 1502, 1533
BclI	TGATCA	1 cut(s)	178
BcnI	CCSGG	1 cut(s)	1294
BcoDI	GTCTC	2 cut(s)	346, 479
BfaI	CTAG	4 cut(s)	455, 1241, 1388, 1397
BfmI	CTRYAG	1 cut(s)	1615
BfrI	CTTAAG	1 cut(s)	328
BglI	GCCNNNNNGGC	1 cut(s)	1295
BisI	GCNGC	1 cut(s)	655
BlsI	GCNGC	1 cut(s)	656
Bme1390I	CCNGG	7 cut(s)	318, 746, 896, 1294, 1465, 1502, 1533
Bme18I	GGWCC	5 cut(s)	284, 851, 970, 1339, 1498
BmgT120I	GGNCC	6 cut(s)	284, 851, 970, 1296, 1339, 1498
BmiI	GGNNCC	5 cut(s)	622, 853, 997, 1297, 1365
BmrFI	CCNGG	7 cut(s)	318, 746, 896, 1294, 1465, 1502, 1533
BmsI	GCATC	1 cut(s)	1611
BpiI	GAAGAC	1 cut(s)	742
BplI	GAGNNNNNCTC	2 cut(s)	890, 922
BpmI	CTGGAG	2 cut(s)	728, 917
BpuEI	CTTGAG	1 cut(s)	481
BpuMI	CCSGG	1 cut(s)	1294
BsaJI	CCNNGG	6 cut(s)	78, 249, 317, 1120, 1210, 1293
BsaWI	WCCGGW	1 cut(s)	286
Bsc4I	CCNNNNNNNGG	2 cut(s)	323, 919
Bse118I	RCCGGY	1 cut(s)	1520
Bse1I	ACTGG	3 cut(s)	724, 781, 1144
Bse21I	CCTNAGG	1 cut(s)	1605
Bse3DI	GCAATG	2 cut(s)	107, 868
BseAI	TCCGGA	1 cut(s)	286
BseBI	CCWGG	6 cut(s)	318, 746, 896, 1465, 1502, 1533
BseDI	CCNNGG	6 cut(s)	78, 249, 317, 1120, 1210, 1293
BseGI	GGATG	2 cut(s)	295, 1626
BseLI	CCNNNNNNNGG	2 cut(s)	323, 919
BseMI	GCAATG	2 cut(s)	107, 868
BseMII	CTCAG	1 cut(s)	1596
BseNI	ACTGG	3 cut(s)	724, 781, 1144
BseRI	GAGGAG	2 cut(s)	1094, 1622
BseSI	GKGCMC	1 cut(s)	1461
BseXI	GCAGC	1 cut(s)	666
BseYI	CCCAGC	2 cut(s)	346, 932
BsgI	GTGCAG	1 cut(s)	1006
Bsh1236I	CGCG	1 cut(s)	756
BshFI	GGCC	6 cut(s)	221, 483, 804, 1196, 1298, 1646
BshNI	GGYRCC	1 cut(s)	995
BsiHKAI	GWGCWC	3 cut(s)	903, 1074, 1614
BsiSI	CCGG	3 cut(s)	287, 1293, 1521
BslFI	GGGAC	1 cut(s)	83
BslI	CCNNNNNNNGG	2 cut(s)	323, 919
BsmAI	GTCTC	2 cut(s)	346, 479
BsmBI	CGTCTC	1 cut(s)	479
BsmFI	GGGAC	1 cut(s)	83
BsnI	GGCC	6 cut(s)	221, 483, 804, 1196, 1298, 1646
Bsp1286I	GDGCHC	4 cut(s)	903, 1074, 1461, 1614
Bsp13I	TCCGGA	1 cut(s)	286
Bsp143I	GATC	6 cut(s)	178, 187, 292, 706, 811, 891
BspACI	CCGC	5 cut(s)	333, 754, 1048, 1077, 1151
BspANI	GGCC	6 cut(s)	221, 483, 804, 1196, 1298, 1646
BspCNI	CTCAG	1 cut(s)	1597
BspEI	TCCGGA	1 cut(s)	286
BspFNI	CGCG	1 cut(s)	756
BspLI	GGNNCC	5 cut(s)	622, 853, 997, 1297, 1365
BspMAI	CTGCAG	1 cut(s)	1619
BspPI	GGATC	3 cut(s)	195, 701, 886
BspT107I	GGYRCC	1 cut(s)	995
BspTI	CTTAAG	1 cut(s)	328
BsrDI	GCAATG	2 cut(s)	107, 868
BsrFI	RCCGGY	1 cut(s)	1520
BsrI	ACTGG	3 cut(s)	724, 781, 1144
BssAI	RCCGGY	1 cut(s)	1520
BssECI	CCNNGG	6 cut(s)	78, 249, 317, 1120, 1210, 1293
BssMI	GATC	6 cut(s)	178, 187, 292, 706, 811, 891
BssNAI	GTATAC	1 cut(s)	1675
BssSI	CACGAG	1 cut(s)	1165
BssT1I	CCWWGG	3 cut(s)	78, 1120, 1210
Bst1107I	GTATAC	1 cut(s)	1675
Bst2BI	CACGAG	1 cut(s)	1165
Bst2UI	CCWGG	6 cut(s)	318, 746, 896, 1465, 1502, 1533
Bst4CI	ACNGT	1 cut(s)	257
BstAFI	CTTAAG	1 cut(s)	328
BstC8I	GCNNGC	5 cut(s)	511, 515, 619, 760, 1198
BstDEI	CTNAG	2 cut(s)	208, 1605
BstEII	GGTNACC	1 cut(s)	944
BstENI	CCTNNNNNAGG	1 cut(s)	321
BstF5I	GGATG	2 cut(s)	295, 1626
BstFNI	CGCG	1 cut(s)	756
BstHHI	GCGC	1 cut(s)	758
BstKTI	GATC	6 cut(s)	181, 190, 295, 709, 814, 894
BstMAI	GTCTC	2 cut(s)	346, 479
BstMBI	GATC	6 cut(s)	178, 187, 292, 706, 811, 891
BstMWI	GCNNNNNNNGC	5 cut(s)	609, 618, 651, 829, 1295
BstNI	CCWGG	6 cut(s)	318, 746, 896, 1465, 1502, 1533
BstNSI	RCATGY	1 cut(s)	9
BstPI	GGTNACC	1 cut(s)	944
BstSCI	CCNGG	7 cut(s)	316, 744, 894, 1292, 1463, 1500, 1531
BstSFI	CTRYAG	1 cut(s)	1615
BstSLI	GKGCMC	1 cut(s)	1461
BstUI	CGCG	1 cut(s)	756
BstV1I	GCAGC	1 cut(s)	666
BstV2I	GAAGAC	1 cut(s)	742
BstX2I	RGATCY	1 cut(s)	891
BstXI	CCANNNNNNTGG	1 cut(s)	237
BstYI	RGATCY	1 cut(s)	891
BstZ17I	GTATAC	1 cut(s)	1675
Bsu36I	CCTNAGG	1 cut(s)	1605
BsuRI	GGCC	6 cut(s)	221, 483, 804, 1196, 1298, 1646
BtsCI	GGATG	2 cut(s)	295, 1626
BtsIMutI	CAGTG	4 cut(s)	134, 774, 1137, 1175
Cac8I	GCNNGC	5 cut(s)	511, 515, 619, 760, 1198
CfoI	GCGC	1 cut(s)	758
Cfr10I	RCCGGY	1 cut(s)	1520
Cfr13I	GGNCC	6 cut(s)	284, 851, 970, 1296, 1339, 1498
CseI	GACGC	1 cut(s)	203
Csp6I	GTAC	1 cut(s)	410
CviAII	CATG	5 cut(s)	6, 85, 1567, 1678, 1726
CviQI	GTAC	1 cut(s)	410
DdeI	CTNAG	2 cut(s)	208, 1605
DpnI	GATC	6 cut(s)	180, 189, 294, 708, 813, 893
DpnII	GATC	6 cut(s)	178, 187, 292, 706, 811, 891
EaeI	YGGCCR	2 cut(s)	481, 1194
EciI	GGCGGA	1 cut(s)	1066
Ecl136II	GAGCTC	3 cut(s)	901, 1072, 1612
Eco130I	CCWWGG	3 cut(s)	78, 1120, 1210
Eco147I	AGGCCT	1 cut(s)	221
Eco24I	GRGCYC	3 cut(s)	903, 1074, 1614
Eco47I	GGWCC	5 cut(s)	284, 851, 970, 1339, 1498
Eco53kI	GAGCTC	3 cut(s)	901, 1072, 1612
Eco57I	CTGAAG	3 cut(s)	503, 558, 908
Eco81I	CCTNAGG	1 cut(s)	1605
Eco91I	GGTNACC	1 cut(s)	944
EcoICRI	GAGCTC	3 cut(s)	901, 1072, 1612
EcoNI	CCTNNNNNAGG	1 cut(s)	321
EcoO109I	RGGNCCY	2 cut(s)	851, 1296
EcoO65I	GGTNACC	1 cut(s)	944
EcoRII	CCWGG	6 cut(s)	316, 744, 894, 1463, 1500, 1531
EcoT14I	CCWWGG	3 cut(s)	78, 1120, 1210
EcoT38I	GRGCYC	3 cut(s)	903, 1074, 1614
ErhI	CCWWGG	3 cut(s)	78, 1120, 1210
Esp3I	CGTCTC	1 cut(s)	479
FaeI	CATG	5 cut(s)	9, 88, 1570, 1681, 1729
FaqI	GGGAC	1 cut(s)	83
FatI	CATG	5 cut(s)	5, 84, 1566, 1677, 1725
FauI	CCCGC	1 cut(s)	1041
FbaI	TGATCA	1 cut(s)	178
FblI	GTMKAC	3 cut(s)	528, 1549, 1674
Fnu4HI	GCNGC	1 cut(s)	655
FokI	GGATG	2 cut(s)	302, 1633
FriOI	GRGCYC	3 cut(s)	903, 1074, 1614
Fsp4HI	GCNGC	1 cut(s)	655
FspBI	CTAG	4 cut(s)	455, 1241, 1388, 1397
GlaI	GCGC	1 cut(s)	757
GluI	GCNGC	1 cut(s)	655
GsaI	CCCAGC	2 cut(s)	350, 936
GsuI	CTGGAG	2 cut(s)	728, 917
HaeIII	GGCC	6 cut(s)	221, 483, 804, 1196, 1298, 1646
HapII	CCGG	3 cut(s)	287, 1293, 1521
HgaI	GACGC	1 cut(s)	203
HhaI	GCGC	1 cut(s)	758
Hin1II	CATG	5 cut(s)	9, 88, 1570, 1681, 1729
Hin6I	GCGC	1 cut(s)	756
HinP1I	GCGC	1 cut(s)	756
HincII	GTYRAC	1 cut(s)	1054
HindII	GTYRAC	1 cut(s)	1054
HindIII	AAGCTT	2 cut(s)	515, 1475
HinfI	GANTC	6 cut(s)	297, 723, 1244, 1324, 1681, 1702
HpaII	CCGG	3 cut(s)	287, 1293, 1521
HphI	GGTGA	8 cut(s)	219, 346, 364, 434, 664, 1099, 1321, 1336
Hpy166II	GTNNAC	8 cut(s)	410, 529, 682, 1035, 1054, 1446, 1550, 1675
Hpy188I	TCNGA	3 cut(s)	253, 522, 888
Hpy188III	TCNNGA	5 cut(s)	191, 287, 416, 455, 849
Hpy8I	GTNNAC	8 cut(s)	410, 529, 682, 1035, 1054, 1446, 1550, 1675
HpyAV	CCTTC	6 cut(s)	165, 263, 442, 700, 1090, 1496
HpyCH4III	ACNGT	1 cut(s)	257
HpyCH4IV	ACGT	1 cut(s)	1094
HpyCH4V	TGCA	7 cut(s)	645, 1023, 1170, 1238, 1320, 1440, 1617
HpyF10VI	GCNNNNNNNGC	5 cut(s)	609, 618, 651, 829, 1295
HpyF3I	CTNAG	2 cut(s)	208, 1605
HpySE526I	ACGT	1 cut(s)	1094
Hsp92II	CATG	5 cut(s)	9, 88, 1570, 1681, 1729
HspAI	GCGC	1 cut(s)	756
Kpn2I	TCCGGA	1 cut(s)	286
Ksp22I	TGATCA	1 cut(s)	178
Kzo9I	GATC	6 cut(s)	178, 187, 292, 706, 811, 891
LmnI	GCTCC	4 cut(s)	626, 747, 898, 1609
Lsp1109I	GCAGC	1 cut(s)	666
LweI	GCATC	1 cut(s)	1611
MaeI	CTAG	4 cut(s)	455, 1241, 1388, 1397
MaeII	ACGT	1 cut(s)	1094
MaeIII	GTNAC	6 cut(s)	67, 191, 568, 944, 1146, 1173
MalI	GATC	6 cut(s)	180, 189, 294, 708, 813, 893
MboI	GATC	6 cut(s)	178, 187, 292, 706, 811, 891
MboII	GAAGA	4 cut(s)	100, 742, 901, 1577
MflI	RGATCY	1 cut(s)	891
MhlI	GDGCHC	4 cut(s)	903, 1074, 1461, 1614
MlsI	TGGCCA	1 cut(s)	1196
MluCI	AATT	9 cut(s)	235, 492, 541, 711, 914, 939, 1042, 1084, 1185
MluNI	TGGCCA	1 cut(s)	1196
MlyI	GAGTC	3 cut(s)	306, 717, 1711
MmeI	TCCRAC	4 cut(s)	841, 939, 1123, 1341
Mox20I	TGGCCA	1 cut(s)	1196
MroI	TCCGGA	1 cut(s)	286
MscI	TGGCCA	1 cut(s)	1196
MseI	TTAA	7 cut(s)	45, 329, 878, 1061, 1280, 1479, 1509
MslI	CAYNNNNRTG	1 cut(s)	677
Msp20I	TGGCCA	1 cut(s)	1196
MspCI	CTTAAG	1 cut(s)	328
MspI	CCGG	3 cut(s)	287, 1293, 1521
MspR9I	CCNGG	7 cut(s)	318, 746, 896, 1294, 1465, 1502, 1533
MvaI	CCWGG	6 cut(s)	318, 746, 896, 1465, 1502, 1533
MvnI	CGCG	1 cut(s)	756
MwoI	GCNNNNNNNGC	5 cut(s)	609, 618, 651, 829, 1295
NciI	CCSGG	1 cut(s)	1294
NdeII	GATC	6 cut(s)	178, 187, 292, 706, 811, 891
NlaIII	CATG	5 cut(s)	9, 88, 1570, 1681, 1729
NlaIV	GGNNCC	5 cut(s)	622, 853, 997, 1297, 1365
NmuCI	GTSAC	3 cut(s)	191, 568, 1173
NspI	RCATGY	1 cut(s)	9
OliI	CACNNNNGTG	1 cut(s)	677
PceI	AGGCCT	1 cut(s)	221
PciI	ACATGT	1 cut(s)	5
PfeI	GAWTC	3 cut(s)	1244, 1324, 1681
PflMI	CCANNNNNTGG	1 cut(s)	919
PfoI	TCCNGGA	1 cut(s)	894
PkrI	GCNGC	1 cut(s)	656
PleI	GAGTC	3 cut(s)	305, 717, 1710
PpsI	GAGTC	3 cut(s)	305, 717, 1710
PpuMI	RGGWCCY	1 cut(s)	851
PscI	ACATGT	1 cut(s)	5
PsiI	TTATAA	1 cut(s)	1517
Psp124BI	GAGCTC	3 cut(s)	903, 1074, 1614
Psp5II	RGGWCCY	1 cut(s)	851
Psp6I	CCWGG	6 cut(s)	316, 744, 894, 1463, 1500, 1531
PspEI	GGTNACC	1 cut(s)	944
PspFI	CCCAGC	2 cut(s)	346, 932
PspGI	CCWGG	6 cut(s)	316, 744, 894, 1463, 1500, 1531
PspN4I	GGNNCC	5 cut(s)	622, 853, 997, 1297, 1365
PspPI	GGNCC	6 cut(s)	284, 851, 970, 1296, 1339, 1498
PspPPI	RGGWCCY	1 cut(s)	851
PstI	CTGCAG	1 cut(s)	1619
PsuI	RGATCY	1 cut(s)	891
RsaI	GTAC	1 cut(s)	411
RsaNI	GTAC	1 cut(s)	410
RseI	CAYNNNNRTG	1 cut(s)	677
SacI	GAGCTC	3 cut(s)	903, 1074, 1614
SaqAI	TTAA	7 cut(s)	45, 329, 878, 1061, 1280, 1479, 1509
SatI	GCNGC	1 cut(s)	655
Sau3AI	GATC	6 cut(s)	178, 187, 292, 706, 811, 891
Sau96I	GGNCC	6 cut(s)	284, 851, 970, 1296, 1339, 1498
SchI	GAGTC	3 cut(s)	306, 717, 1711
ScrFI	CCNGG	7 cut(s)	318, 746, 896, 1294, 1465, 1502, 1533
SduI	GDGCHC	4 cut(s)	903, 1074, 1461, 1614
SfaNI	GCATC	1 cut(s)	1611
SfcI	CTRYAG	1 cut(s)	1615
SinI	GGWCC	5 cut(s)	284, 851, 970, 1339, 1498
SmiMI	CAYNNNNRTG	1 cut(s)	677
SmlI	CTYRAG	2 cut(s)	328, 460
SmoI	CTYRAG	2 cut(s)	328, 460
Sse9I	AATT	9 cut(s)	235, 492, 541, 711, 914, 939, 1042, 1084, 1185
SseBI	AGGCCT	1 cut(s)	221
SsiI	CCGC	5 cut(s)	333, 754, 1048, 1077, 1151
SspMI	CTAG	4 cut(s)	455, 1241, 1388, 1397
SstI	GAGCTC	3 cut(s)	903, 1074, 1614
StuI	AGGCCT	1 cut(s)	221
StyD4I	CCNGG	7 cut(s)	316, 744, 894, 1292, 1463, 1500, 1531
StyI	CCWWGG	3 cut(s)	78, 1120, 1210
TaaI	ACNGT	1 cut(s)	257
TaiI	ACGT	1 cut(s)	1097
TaqI	TCGA	1 cut(s)	295
TasI	AATT	9 cut(s)	235, 492, 541, 711, 914, 939, 1042, 1084, 1185
TatI	WGTACW	1 cut(s)	409
TfiI	GAWTC	3 cut(s)	1244, 1324, 1681
Tru1I	TTAA	7 cut(s)	45, 329, 878, 1061, 1280, 1479, 1509
Tru9I	TTAA	7 cut(s)	45, 329, 878, 1061, 1280, 1479, 1509
TscAI	CASTG	4 cut(s)	134, 781, 1144, 1182
TseFI	GTSAC	3 cut(s)	191, 568, 1173
TseI	GCWGC	1 cut(s)	654
Tsp45I	GTSAC	3 cut(s)	191, 568, 1173
TspDTI	ATGAA	7 cut(s)	68, 101, 127, 486, 519, 1395, 1694
TspRI	CASTG	4 cut(s)	134, 781, 1144, 1182
Van91I	CCANNNNNTGG	1 cut(s)	919
Vha464I	CTTAAG	1 cut(s)	328
VpaK11BI	GGWCC	5 cut(s)	284, 851, 970, 1339, 1498
XagI	CCTNNNNNAGG	1 cut(s)	321
XapI	RAATTY	1 cut(s)	1042
XbaI	TCTAGA	1 cut(s)	454
XceI	RCATGY	1 cut(s)	9
XmiI	GTMKAC	3 cut(s)	528, 1549, 1674
XspI	CTAG	4 cut(s)	455, 1241, 1388, 1397

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.