Rroxscaffold_2G00094460

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0016078
Physical Location & Seq
Reverse (-)
15763373 .. 15768207
4835 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00094460.1

Sequence Viewer

Length: 2472 bp
ATGAAGACGGAAGCAACCGGATTTCTGATCCAAATCGACGACGACGTAGACGAAGACTTCCTTTCTCAGGTTGCCGCCGCCGAGGCCCATGCTCTCGCGAACAAGCGCCGCCGTATCGCCACCCCCACGCCCTCCCCAAACGCAGTCGCGTCGGCACCTCCGCCACCACTGGCGGCGAATCCGAAGGAGAGATCTGACGCCGAAGCCGACGGAGGTCTCTACATCGCGGCCCTCAAAGGAAACCAGAGCGCGTTCTCCGAGCCTCCGCGCGGCGGTGGATTTGGCAGAGGGCGAGTCGGCGGGGCAGTAGCGGCGGCGGGAAACGACGGTGTTTTGGGCGGTGATGCGTGCTTCAAGTGCGGGAAATCGGGACACTGGGCTCGCGATTGCGATTCCCCAGGCGGAGGAGGAGGAGGTGGCGGGGGGTATAGTGGTAATTACGGCGGCGACGCTGCGTCGGCGATTTCGTTTCCTGATAAAAGCTGCCCCTGTGGATCTGGAACCTGCGTAGTGCTCACTGCAAATACTGAGAAGAATCGAGGTCGAAAATTCTACAAATGCCCACTTAGACAGGAAAATGGGGGTTGTGGTTTCTTTGAGTGGTGTGATAATGCTTCTGGGCCTAATGCCATGGCTGGTGCTGGTAGTGGTAGCTTTAGTAGGACCCAAAACTATGCATCTGATTCTACATTTCCAGCTCTTGAATGTCCCTGTGGTGGTGGGCAATGCCGAATCTTAACAGCTAAAACCGGCAAAAATATCGGCAGCCAATTCTATCGCTGTCCTGGAAATGAGGGAAGCTCTTGCGGTTTCTTCAAGTGGTGCAGTGAGAATACTGTGGCAGCTGGTAGTGTTCAAGGTGCACGAATCCCCAAGGTGGTTTATGGTTCAAGCGAGACAGGCAGCCAAGGGAGCTATGGTGTTAGGACTGGTTCTTCCTGTTACAAGTGTGGAAAGGAAGGGCATTGGGCAAGAGATTGCTCCTCTGCTGATAAGCAGATTATTTTCTCGACTTCAATGCTTCTCTTTAATAAGCCTCATGCTGTATGCATTCCATTGCCATTGCAAAGCCATATAAAGGCAATGCTTCAGTTAGCTAAACTCCTCCACCACAGAGGTTTTCATATTACCTTCGTCAACACAGAGTTCAATCACAAGCGCTTTCGTAAATCTCTTGGACCCAACTCTCTTGATGCCTTGCCTGATTTTCGCTTTGAAACTATTCCAGATGGCCTTCCAAATTCAGTTGAAAGTGAGACCCAAAACATCCCTTTGCTTTGTGATTCCGTCAGAAGAAATTGCTTGCATCCGTTTCGTAACATCCTTAACAAACTAAATGGAAATATGGTTCCCGTGACTTGCATCGTCTCTGATGGTTTCCTTACGTTCACCATCACAGCTGCTGAAGAACTTGGCATCCCTGTAGTGCAATTCTTTACTTTGGCTGCAATAGGATTCCTGGGATGTAAACAACTTCCCACTTTGGTGGCAAAAGGACTTGCACCACTCAAAGACGAGAACTGTTTAACAAATGGATCTTTGGACAAGGTAATAGATTGGATCCCTGGAATTAAAGATATCCGTCTCAGGGATCTCCCAAGCTCTTGGAGAACGACAAACCCCGACAAAATCTTGTTTAACTTCACCTTGGAAGCAGTGAAGAGAGTTCATAAAGCTTCAGCGGTTGTTGTTCATACTTTTGATGCCCTGGAGCCAGATGTTCTAGATTCTCTCTCTAAGTGTACATCTCTGCTTCCACCGGTTTATGCCATTGGCCCTCTCCAATTACTTCTCAATCAGATACCAGAACACCCTTTGAAGTCCGTGGGGTACAGTCTATGGAAAGAAGAAACAGAGTGCTTGCTATGGCTCAACTCTAAGGCGAAAAATTCAGTTGTTTATGTCAACTTTGGCAGTTTAGTAGTCATTAGACCAGAAAATCTTATTGAGTTTGGCTGGGGACTTGCAAATAGCAAGCTTCCCTTCTTGTGGGTTATTAGACCTGATTTGATTATTGGGGAATCGGCGTTTCTGCCACCTGAGTTTGTGGCTGAAACAGAGGGAAGATGTCTAATAGCAAGTTGGTGCCCACAAGAACAAGTGCTTAACCATCCATCAGTCGGAGCGTTTTTAACACATTGCGGTTGGAATTCGACCATGGAGAGTATTTCTGCTGGAGTGCCTATGCTCTGTTGGCCATTAAGTGGTGACCAGCCTATAAACTGTCGCTATGTTTGTAATGAGTGGGGCATCGGCATGGAGATCAGTAGTGATGTGAAGAGGGACGAAGTAGAGAAGCTTGTTAAAGAGTTAATGGAGGGAGAGAAGGGTAGGAAAATGAAAAGTAAGGTCATGGAGTGGAAGAAGCTAGCAGAAAAGGCCAGTAGTCCACTTGGTTCTTCATCCATAACCTTAGACAATTTAGTCAATGAAGTGCTATTGAGCAAAGCTAATGTTGTTCCCATTTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

823

Amino Acids

88.46

Weight (kDa)

7.39

Isoelectric Point (pI)

42.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCHC PF00098 116 - 132 4.3e-07 Zinc knuckle
Zn_ribbon_GRF PF06839 161 - 204 2.3e-15 GRF zinc finger
Zn_ribbon_GRF PF06839 236 - 277 5.2e-14 GRF zinc finger
zf-CCHC PF00098 313 - 328 1.5e-07 Zinc knuckle
UDPGT PF00201 544 - 776 5.3e-29 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016078)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G42860
fragaria_vesca FvH4_6g39844 FvH4_6g39844 FvH4_6g39844
malus_domestica MD17G1125500.v1.1
prunus_persica Prupe.3G190200_v2.0.a1
pyrus_communis pycom17g11770
rosa_chinensis RchiOBHm_Chr2g0154211
rosa_laevigata RLG00000020764
rosa_roxburghii Rroxscaffold_2G00094460
rosa_samantha Rh2AG507900 Rh2BG518900 Rh2CG493200 Rh2DG529800
rosa_wichuraiana Rw2G041710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2423
Acc36I ACCTGC 1 cut(s) 512
AccB1I GGYRCC 2 cut(s) 154, 2085
AccB7I CCANNNNNTGG 1 cut(s) 2204
AccI GTMKAC 1 cut(s) 48
AccII CGCG 7 cut(s) 98, 149, 227, 251, 268, 270, 384
AclWI GGATC 6 cut(s) 22, 502, 1543, 1555, 1568, 1599
AcoI YGGCCR 1 cut(s) 2195
AcsI RAATTY 4 cut(s) 548, 1240, 1888, 2149
AcuI CTGAAG 3 cut(s) 1073, 1425, 1662
AcyI GRCGYC 1 cut(s) 198
AfaI GTAC 2 cut(s) 1744, 1832
AfeI AGCGCT 1 cut(s) 1160
AgeI ACCGGT 1 cut(s) 1759
AhdI GACNNNNNGTC 1 cut(s) 454
AjnI CCWGG 5 cut(s) 397, 784, 1458, 1564, 1707
AleI CACNNNNGTG 1 cut(s) 1484
AloI GAACNNNNNNTCC 4 cut(s) 1332, 1364, 1401, 1433
Alw21I GWGCWC 2 cut(s) 516, 865
Alw26I GTCTC 5 cut(s) 221, 890, 1250, 1372, 1589
Alw44I GTGCAC 1 cut(s) 861
AlwI GGATC 6 cut(s) 22, 502, 1543, 1555, 1568, 1599
AlwNI CAGNNNCTG 1 cut(s) 1403
Aor51HI AGCGCT 1 cut(s) 1160
AoxI GGCC 7 cut(s) 84, 228, 620, 1231, 1774, 2195, 2379
ApaLI GTGCAC 1 cut(s) 861
ApeKI GCWGC 7 cut(s) 452, 483, 765, 842, 903, 1400, 1445
ApoI RAATTY 4 cut(s) 548, 1240, 1888, 2149
AsiGI ACCGGT 1 cut(s) 1759
Asp700I GAANNNNTTC 1 cut(s) 1221
AspLEI GCGC 4 cut(s) 108, 251, 270, 1161
AspS9I GGNCC 6 cut(s) 85, 229, 620, 663, 1178, 1775
AsuHPI GGTGA 4 cut(s) 353, 1381, 1636, 2219
AsuNHI GCTAGC 1 cut(s) 2368
AvaII GGWCC 2 cut(s) 663, 1178
BaeGI GKGCMC 2 cut(s) 865, 2090
BalI TGGCCA 1 cut(s) 2197
BamHI GGATCC 1 cut(s) 1560
BanI GGYRCC 2 cut(s) 154, 2085
BanII GRGCYC 1 cut(s) 382
BbsI GAAGAC 2 cut(s) 11, 60
Bbv12I GWGCWC 2 cut(s) 516, 865
BbvI GCAGC 7 cut(s) 439, 470, 777, 854, 915, 1387, 1432
BccI CCATC 5 cut(s) 1223, 1367, 1400, 2118, 2122
BceAI ACGGC 2 cut(s) 96, 457
BciT130I CCWGG 5 cut(s) 399, 786, 1460, 1566, 1709
BcoDI GTCTC 5 cut(s) 221, 890, 1250, 1372, 1589
BfaI CTAG 2 cut(s) 1724, 2369
BfmI CTRYAG 1 cut(s) 1422
BfoI RGCGCY 2 cut(s) 109, 1162
BfuAI ACCTGC 1 cut(s) 512
BglI GCCNNNNNGGC 1 cut(s) 83
BglII AGATCT 1 cut(s) 191
Bme1390I CCNGG 5 cut(s) 399, 786, 1460, 1566, 1709
Bme18I GGWCC 2 cut(s) 663, 1178
BmeRI GACNNNNNGTC 1 cut(s) 454
BmgT120I GGNCC 6 cut(s) 85, 229, 620, 663, 1178, 1775
BmiI GGNNCC 8 cut(s) 156, 502, 665, 1180, 1350, 1562, 1713, 2087
BmrFI CCNGG 5 cut(s) 399, 786, 1460, 1566, 1709
BmrI ACTGGG 1 cut(s) 385
BmsI GCATC 8 cut(s) 334, 686, 1183, 1315, 1371, 1425, 1693, 2259
BmtI GCTAGC 1 cut(s) 2372
BmuI ACTGGG 1 cut(s) 385
BoxI GACNNNNGTC 1 cut(s) 213
BpiI GAAGAC 2 cut(s) 11, 60
BplI GAGNNNNNCTC 2 cut(s) 785, 817
BpmI CTGGAG 2 cut(s) 1730, 2196
BsaBI GATNNNNATC 1 cut(s) 32
BsaHI GRCGYC 1 cut(s) 198
BsaI GGTCTC 2 cut(s) 221, 1250
BsaWI WCCGGW 2 cut(s) 17, 1759
BsaXI ACNNNNNCTCC 2 cut(s) 904, 934
Bse118I RCCGGY 2 cut(s) 749, 1759
Bse1I ACTGG 4 cut(s) 174, 380, 934, 2382
Bse3DI GCAATG 5 cut(s) 731, 1055, 1061, 1089, 2137
Bse8I GATNNNNATC 1 cut(s) 32
BseBI CCWGG 5 cut(s) 399, 786, 1460, 1566, 1709
BseGI GGATG 7 cut(s) 1266, 1306, 1320, 1416, 1469, 2110, 2402
BseJI GATNNNNATC 1 cut(s) 32
BseMI GCAATG 5 cut(s) 731, 1055, 1061, 1089, 2137
BseMII CTCAG 4 cut(s) 80, 519, 1600, 2031
BseNI ACTGG 4 cut(s) 174, 380, 934, 2382
BseRI GAGGAG 5 cut(s) 420, 423, 426, 973, 1094
BseSI GKGCMC 2 cut(s) 865, 2090
BseXI GCAGC 7 cut(s) 439, 470, 777, 854, 915, 1387, 1432
BseYI CCCAGC 1 cut(s) 1956
BsgI GTGCAG 1 cut(s) 844
Bsh1236I CGCG 7 cut(s) 98, 149, 227, 251, 268, 270, 384
BshFI GGCC 7 cut(s) 86, 230, 622, 1233, 1776, 2197, 2381
BshNI GGYRCC 2 cut(s) 154, 2085
BshTI ACCGGT 1 cut(s) 1759
BsiHKAI GWGCWC 2 cut(s) 516, 865
BsiSI CCGG 3 cut(s) 18, 750, 1760
BslFI GGGAC 4 cut(s) 384, 693, 1974, 2297
BsmAI GTCTC 5 cut(s) 221, 890, 1250, 1372, 1589
BsmBI CGTCTC 2 cut(s) 1372, 1589
BsmFI GGGAC 4 cut(s) 384, 693, 1974, 2297
BsmI GAATGC 1 cut(s) 1050
BsnI GGCC 7 cut(s) 86, 230, 622, 1233, 1776, 2197, 2381
Bso31I GGTCTC 2 cut(s) 221, 1250
Bsp1286I GDGCHC 4 cut(s) 382, 516, 865, 2090
Bsp1407I TGTACA 1 cut(s) 1742
Bsp143I GATC 7 cut(s) 27, 191, 494, 1535, 1560, 1591, 2262
Bsp19I CCATGG 2 cut(s) 630, 2157
Bsp68I TCGCGA 2 cut(s) 98, 384
BspANI GGCC 7 cut(s) 86, 230, 622, 1233, 1776, 2197, 2381
BspCNI CTCAG 4 cut(s) 79, 520, 1599, 2032
BspFNI CGCG 7 cut(s) 98, 149, 227, 251, 268, 270, 384
BspLI GGNNCC 8 cut(s) 156, 502, 665, 1180, 1350, 1562, 1713, 2087
BspMI ACCTGC 1 cut(s) 512
BspOI GCTAGC 1 cut(s) 2372
BspPI GGATC 6 cut(s) 22, 502, 1543, 1555, 1568, 1599
BspT107I GGYRCC 2 cut(s) 154, 2085
BspTNI GGTCTC 2 cut(s) 221, 1250
BsrDI GCAATG 5 cut(s) 731, 1055, 1061, 1089, 2137
BsrFI RCCGGY 2 cut(s) 749, 1759
BsrGI TGTACA 1 cut(s) 1742
BsrI ACTGG 4 cut(s) 174, 380, 934, 2382
BssAI RCCGGY 2 cut(s) 749, 1759
BssMI GATC 7 cut(s) 27, 191, 494, 1535, 1560, 1591, 2262
BssNI GRCGYC 1 cut(s) 198
BssT1I CCWWGG 5 cut(s) 630, 873, 907, 1647, 2157
Bst2UI CCWGG 5 cut(s) 399, 786, 1460, 1566, 1709
Bst4CI ACNGT 5 cut(s) 329, 838, 1523, 1835, 2225
Bst6I CTCTTC 2 cut(s) 1655, 2273
BstACI GRCGYC 1 cut(s) 198
BstAUI TGTACA 1 cut(s) 1742
BstC8I GCNNGC 6 cut(s) 349, 382, 1304, 1862, 1976, 2370
BstDEI CTNAG 8 cut(s) 66, 528, 566, 1586, 1737, 1878, 2040, 2413
BstDSI CCRYGG 3 cut(s) 630, 1824, 2157
BstEII GGTNACC 1 cut(s) 2207
BstENI CCTNNNNNAGG 1 cut(s) 65
BstF5I GGATG 7 cut(s) 1266, 1306, 1320, 1416, 1469, 2110, 2402
BstFNI CGCG 7 cut(s) 98, 149, 227, 251, 268, 270, 384
BstH2I RGCGCY 2 cut(s) 109, 1162
BstHHI GCGC 4 cut(s) 108, 251, 270, 1161
BstKTI GATC 7 cut(s) 30, 194, 497, 1538, 1563, 1594, 2265
BstMAI GTCTC 5 cut(s) 221, 890, 1250, 1372, 1589
BstMBI GATC 7 cut(s) 27, 191, 494, 1535, 1560, 1591, 2262
BstMWI GCNNNNNNNGC 8 cut(s) 83, 311, 357, 458, 900, 912, 2194, 2378
BstNI CCWGG 5 cut(s) 399, 786, 1460, 1566, 1709
BstPAI GACNNNNGTC 1 cut(s) 213
BstPI GGTNACC 1 cut(s) 2207
BstSCI CCNGG 5 cut(s) 397, 784, 1458, 1564, 1707
BstSFI CTRYAG 1 cut(s) 1422
BstSLI GKGCMC 2 cut(s) 865, 2090
BstUI CGCG 7 cut(s) 98, 149, 227, 251, 268, 270, 384
BstV1I GCAGC 7 cut(s) 439, 470, 777, 854, 915, 1387, 1432
BstV2I GAAGAC 2 cut(s) 11, 60
BstX2I RGATCY 5 cut(s) 191, 494, 1535, 1560, 1591
BstXI CCANNNNNNTGG 2 cut(s) 1486, 1605
BstYI RGATCY 5 cut(s) 191, 494, 1535, 1560, 1591
BsuRI GGCC 7 cut(s) 86, 230, 622, 1233, 1776, 2197, 2381
BtgI CCRYGG 3 cut(s) 630, 1824, 2157
BtgZI GCGATG 1 cut(s) 208
BtsCI GGATG 7 cut(s) 1266, 1306, 1320, 1416, 1469, 2110, 2402
BtsI GCAGTG 3 cut(s) 516, 832, 1662
BtsIMutI CAGTG 5 cut(s) 167, 373, 516, 832, 1662
BtuMI TCGCGA 2 cut(s) 98, 384
BveI ACCTGC 1 cut(s) 512
Cac8I GCNNGC 6 cut(s) 349, 382, 1304, 1862, 1976, 2370
CaiI CAGNNNCTG 1 cut(s) 1403
CfoI GCGC 4 cut(s) 108, 251, 270, 1161
Cfr10I RCCGGY 2 cut(s) 749, 1759
Cfr13I GGNCC 6 cut(s) 85, 229, 620, 663, 1178, 1775
CseI GACGC 4 cut(s) 138, 206, 444, 458
Csp6I GTAC 2 cut(s) 1743, 1831
CspAI ACCGGT 1 cut(s) 1759
CviAII CATG 6 cut(s) 89, 631, 1040, 2158, 2257, 2353
CviQI GTAC 2 cut(s) 1743, 1831
DdeI CTNAG 8 cut(s) 66, 528, 566, 1586, 1737, 1878, 2040, 2413
DpnI GATC 7 cut(s) 29, 193, 496, 1537, 1562, 1593, 2264
DpnII GATC 7 cut(s) 27, 191, 494, 1535, 1560, 1591, 2262
DrdI GACNNNNNNGTC 1 cut(s) 2423
DriI GACNNNNNGTC 1 cut(s) 454
DseDI GACNNNNNNGTC 1 cut(s) 2423
EaeI YGGCCR 1 cut(s) 2195
Eam1104I CTCTTC 2 cut(s) 1655, 2273
Eam1105I GACNNNNNGTC 1 cut(s) 454
EarI CTCTTC 2 cut(s) 1655, 2273
EciI GGCGGA 2 cut(s) 150, 417
Eco130I CCWWGG 5 cut(s) 630, 873, 907, 1647, 2157
Eco24I GRGCYC 1 cut(s) 382
Eco31I GGTCTC 2 cut(s) 221, 1250
Eco32I GATATC 1 cut(s) 1579
Eco47I GGWCC 2 cut(s) 663, 1178
Eco47III AGCGCT 1 cut(s) 1160
Eco57I CTGAAG 3 cut(s) 1073, 1425, 1662
Eco91I GGTNACC 1 cut(s) 2207
EcoNI CCTNNNNNAGG 1 cut(s) 65
EcoO109I RGGNCCY 1 cut(s) 663
EcoO65I GGTNACC 1 cut(s) 2207
EcoRI GAATTC 1 cut(s) 2149
EcoRII CCWGG 5 cut(s) 397, 784, 1458, 1564, 1707
EcoRV GATATC 1 cut(s) 1579
EcoT14I CCWWGG 5 cut(s) 630, 873, 907, 1647, 2157
EcoT22I ATGCAT 2 cut(s) 679, 1052
EcoT38I GRGCYC 1 cut(s) 382
ErhI CCWWGG 5 cut(s) 630, 873, 907, 1647, 2157
Esp3I CGTCTC 2 cut(s) 1372, 1589
FaeI CATG 6 cut(s) 92, 634, 1043, 2161, 2260, 2356
FalI AAGNNNNNCTT 4 cut(s) 45, 77, 1967, 1999
FaqI GGGAC 4 cut(s) 384, 693, 1974, 2297
FatI CATG 6 cut(s) 88, 630, 1039, 2157, 2256, 2352
FauI CCCGC 4 cut(s) 293, 310, 353, 413
FblI GTMKAC 1 cut(s) 48
FokI GGATG 7 cut(s) 1253, 1293, 1307, 1403, 1476, 2097, 2389
FriOI GRGCYC 1 cut(s) 382
FspBI CTAG 2 cut(s) 1724, 2369
GlaI GCGC 4 cut(s) 107, 250, 269, 1160
GsaI CCCAGC 1 cut(s) 1960
GsuI CTGGAG 2 cut(s) 1730, 2196
HaeII RGCGCY 2 cut(s) 109, 1162
HaeIII GGCC 7 cut(s) 86, 230, 622, 1233, 1776, 2197, 2381
HapII CCGG 3 cut(s) 18, 750, 1760
HgaI GACGC 4 cut(s) 138, 206, 444, 458
HhaI GCGC 4 cut(s) 108, 251, 270, 1161
Hin1I GRCGYC 1 cut(s) 198
Hin1II CATG 6 cut(s) 92, 634, 1043, 2161, 2260, 2356
Hin6I GCGC 4 cut(s) 106, 249, 268, 1159
HinP1I GCGC 4 cut(s) 106, 249, 268, 1159
HincII GTYRAC 2 cut(s) 1138, 1906
HindII GTYRAC 2 cut(s) 1138, 1906
HindIII AAGCTT 3 cut(s) 1674, 1976, 2297
HpaII CCGG 3 cut(s) 18, 750, 1760
HphI GGTGA 4 cut(s) 353, 1381, 1636, 2219
Hpy166II GTNNAC 8 cut(s) 49, 863, 1138, 1389, 1469, 1743, 1906, 2390
Hpy188I TCNGA 9 cut(s) 27, 183, 196, 259, 682, 1292, 1372, 1800, 2123
Hpy8I GTNNAC 8 cut(s) 49, 863, 1138, 1389, 1469, 1743, 1906, 2390
Hpy99I CGWCG 8 cut(s) 41, 44, 47, 154, 212, 329, 452, 460
HpyAV CCTTC 6 cut(s) 178, 953, 1141, 1244, 1993, 2320
HpyCH4III ACNGT 5 cut(s) 329, 838, 1523, 1835, 2225
HpyCH4IV ACGT 2 cut(s) 45, 1385
HpyF10VI GCNNNNNNNGC 8 cut(s) 83, 311, 357, 458, 900, 912, 2194, 2378
HpyF3I CTNAG 8 cut(s) 66, 528, 566, 1586, 1737, 1878, 2040, 2413
HpySE526I ACGT 2 cut(s) 45, 1385
Hsp92I GRCGYC 1 cut(s) 198
Hsp92II CATG 6 cut(s) 92, 634, 1043, 2161, 2260, 2356
HspAI GCGC 4 cut(s) 106, 249, 268, 1159
Kzo9I GATC 7 cut(s) 27, 191, 494, 1535, 1560, 1591, 2262
LmnI GCTCC 4 cut(s) 912, 986, 1711, 2123
Lsp1109I GCAGC 7 cut(s) 439, 470, 777, 854, 915, 1387, 1432
LweI GCATC 8 cut(s) 334, 686, 1183, 1315, 1371, 1425, 1693, 2259
MaeI CTAG 2 cut(s) 1724, 2369
MaeII ACGT 2 cut(s) 45, 1385
MaeIII GTNAC 4 cut(s) 941, 1316, 1354, 2207
MalI GATC 7 cut(s) 29, 193, 496, 1537, 1562, 1593, 2264
MboI GATC 7 cut(s) 27, 191, 494, 1535, 1560, 1591, 2262
MflI RGATCY 5 cut(s) 191, 494, 1535, 1560, 1591
MhlI GDGCHC 4 cut(s) 382, 516, 865, 2090
MlsI TGGCCA 1 cut(s) 2197
MluNI TGGCCA 1 cut(s) 2197
MlyI GAGTC 1 cut(s) 303
MmeI TCCRAC 2 cut(s) 2101, 2126
Mox20I TGGCCA 1 cut(s) 2197
Mph1103I ATGCAT 2 cut(s) 679, 1052
MroXI GAANNNNTTC 1 cut(s) 1221
MscI TGGCCA 1 cut(s) 2197
MslI CAYNNNNRTG 2 cut(s) 1484, 2255
Msp20I TGGCCA 1 cut(s) 2197
MspA1I CMGCKG 3 cut(s) 845, 1400, 1682
MspI CCGG 3 cut(s) 18, 750, 1760
MspR9I CCNGG 5 cut(s) 399, 786, 1460, 1566, 1709
Mva1269I GAATGC 1 cut(s) 1050
MvaI CCWGG 5 cut(s) 399, 786, 1460, 1566, 1709
MvnI CGCG 7 cut(s) 98, 149, 227, 251, 268, 270, 384
MwoI GCNNNNNNNGC 8 cut(s) 83, 311, 357, 458, 900, 912, 2194, 2378
NcoI CCATGG 2 cut(s) 630, 2157
NdeII GATC 7 cut(s) 27, 191, 494, 1535, 1560, 1591, 2262
NheI GCTAGC 1 cut(s) 2368
NlaIII CATG 6 cut(s) 92, 634, 1043, 2161, 2260, 2356
NlaIV GGNNCC 8 cut(s) 156, 502, 665, 1180, 1350, 1562, 1713, 2087
NmeAIII GCCGAG 1 cut(s) 106
NmuCI GTSAC 2 cut(s) 1354, 2207
NruI TCGCGA 2 cut(s) 98, 384
NsiI ATGCAT 2 cut(s) 679, 1052
OliI CACNNNNGTG 1 cut(s) 1484
PcsI WCGNNNNNNNCGW 4 cut(s) 42, 48, 204, 464
PctI GAATGC 1 cut(s) 1050
PdmI GAANNNNTTC 1 cut(s) 1221
PflMI CCANNNNNTGG 1 cut(s) 2204
PfoI TCCNGGA 1 cut(s) 784
PinAI ACCGGT 1 cut(s) 1759
PleI GAGTC 1 cut(s) 302
PpsI GAGTC 1 cut(s) 302
PpuMI RGGWCCY 1 cut(s) 663
PshAI GACNNNNGTC 1 cut(s) 213
Psp5II RGGWCCY 1 cut(s) 663
Psp6I CCWGG 5 cut(s) 397, 784, 1458, 1564, 1707
PspEI GGTNACC 1 cut(s) 2207
PspFI CCCAGC 1 cut(s) 1956
PspGI CCWGG 5 cut(s) 397, 784, 1458, 1564, 1707
PspN4I GGNNCC 8 cut(s) 156, 502, 665, 1180, 1350, 1562, 1713, 2087
PspPI GGNCC 6 cut(s) 85, 229, 620, 663, 1178, 1775
PspPPI RGGWCCY 1 cut(s) 663
PstNI CAGNNNCTG 1 cut(s) 1403
PsuI RGATCY 5 cut(s) 191, 494, 1535, 1560, 1591
PvuII CAGCTG 2 cut(s) 845, 1400
RruI TCGCGA 2 cut(s) 98, 384
RsaI GTAC 2 cut(s) 1744, 1832
RsaNI GTAC 2 cut(s) 1743, 1831
RseI CAYNNNNRTG 2 cut(s) 1484, 2255
Sau3AI GATC 7 cut(s) 27, 191, 494, 1535, 1560, 1591, 2262
Sau96I GGNCC 6 cut(s) 85, 229, 620, 663, 1178, 1775
SchI GAGTC 1 cut(s) 303
ScrFI CCNGG 5 cut(s) 399, 786, 1460, 1566, 1709
SduI GDGCHC 4 cut(s) 382, 516, 865, 2090
SfaNI GCATC 8 cut(s) 334, 686, 1183, 1315, 1371, 1425, 1693, 2259
SfcI CTRYAG 1 cut(s) 1422
SinI GGWCC 2 cut(s) 663, 1178
SmiMI CAYNNNNRTG 2 cut(s) 1484, 2255
SspMI CTAG 2 cut(s) 1724, 2369
StyD4I CCNGG 5 cut(s) 397, 784, 1458, 1564, 1707
StyI CCWWGG 5 cut(s) 630, 873, 907, 1647, 2157
TaaI ACNGT 5 cut(s) 329, 838, 1523, 1835, 2225
TaiI ACGT 2 cut(s) 48, 1388
TaqI TCGA 5 cut(s) 36, 538, 544, 1010, 2153
TatI WGTACW 1 cut(s) 1742
TauI GCSGC 9 cut(s) 77, 80, 111, 176, 230, 273, 314, 317, 447
TscAI CASTG 5 cut(s) 174, 380, 523, 832, 1662
TseFI GTSAC 2 cut(s) 1354, 2207
TseI GCWGC 7 cut(s) 452, 483, 765, 842, 903, 1400, 1445
Tsp45I GTSAC 2 cut(s) 1354, 2207
TspDTI ATGAA 8 cut(s) 17, 1112, 1658, 1682, 2354, 2391, 2445, 2457
TspGWI ACGGA 6 cut(s) 23, 225, 1276, 1299, 1571, 1813
TspRI CASTG 5 cut(s) 174, 380, 523, 832, 1662
Van91I CCANNNNNTGG 1 cut(s) 2204
VneI GTGCAC 1 cut(s) 861
VpaK11BI GGWCC 2 cut(s) 663, 1178
XagI CCTNNNNNAGG 1 cut(s) 65
XapI RAATTY 4 cut(s) 548, 1240, 1888, 2149
XbaI TCTAGA 1 cut(s) 1723
XcmI CCANNNNNNNNNTGG 1 cut(s) 914
XmiI GTMKAC 1 cut(s) 48
XmnI GAANNNNTTC 1 cut(s) 1221
XspI CTAG 2 cut(s) 1724, 2369
Zsp2I ATGCAT 2 cut(s) 679, 1052
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.