homeobox protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0170231 RchiOBHm_Chr5g0057291 |
| rosa_multiflora | Rmu_sc0000854.1_g000041 Rmu_sc0000857.1_g000007 |
| rosa_roxburghii | Rroxscaffold_2G00112110 |
| rosa_samantha | Rh2CG599900 Rh4DG167400 Rh7AG420400 Rh7DG444400 |
| rosa_wichuraiana | Rw0G021080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 60 |
| AciI | CCGC | 1 cut(s) | 135 |
| AclWI | GGATC | 1 cut(s) | 15 |
| AcsI | RAATTY | 1 cut(s) | 31 |
| AdeI | CACNNNGTG | 1 cut(s) | 292 |
| AgsI | TTSAA | 4 cut(s) | 67, 172, 260, 276 |
| AluBI | AGCT | 5 cut(s) | 19, 76, 100, 228, 327 |
| AluI | AGCT | 5 cut(s) | 19, 76, 100, 228, 327 |
| Alw21I | GWGCWC | 2 cut(s) | 78, 102 |
| AlwI | GGATC | 1 cut(s) | 15 |
| ApoI | RAATTY | 1 cut(s) | 31 |
| AsuC2I | CCSGG | 1 cut(s) | 193 |
| AsuHPI | GGTGA | 1 cut(s) | 124 |
| BanII | GRGCYC | 2 cut(s) | 78, 102 |
| Bbv12I | GWGCWC | 2 cut(s) | 78, 102 |
| BccI | CCATC | 1 cut(s) | 153 |
| BcnI | CCSGG | 1 cut(s) | 193 |
| BfaI | CTAG | 1 cut(s) | 20 |
| Bme1390I | CCNGG | 1 cut(s) | 193 |
| BmrFI | CCNGG | 1 cut(s) | 193 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 28 |
| Bpu10I | CCTNAGC | 1 cut(s) | 224 |
| BpuMI | CCSGG | 1 cut(s) | 193 |
| BseGI | GGATG | 1 cut(s) | 252 |
| BsiHKAI | GWGCWC | 2 cut(s) | 78, 102 |
| BsiSI | CCGG | 1 cut(s) | 193 |
| Bsp1286I | GDGCHC | 2 cut(s) | 78, 102 |
| Bsp143I | GATC | 2 cut(s) | 7, 265 |
| BspACI | CCGC | 1 cut(s) | 135 |
| BspPI | GGATC | 1 cut(s) | 15 |
| BspQI | GCTCTTC | 1 cut(s) | 83 |
| BssMI | GATC | 2 cut(s) | 7, 265 |
| Bst6I | CTCTTC | 2 cut(s) | 62, 83 |
| BstDEI | CTNAG | 1 cut(s) | 224 |
| BstF5I | GGATG | 1 cut(s) | 252 |
| BstKTI | GATC | 2 cut(s) | 10, 268 |
| BstMBI | GATC | 2 cut(s) | 7, 265 |
| BstSCI | CCNGG | 1 cut(s) | 191 |
| BstX2I | RGATCY | 1 cut(s) | 7 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 182 |
| BstYI | RGATCY | 1 cut(s) | 7 |
| BtsCI | GGATG | 1 cut(s) | 252 |
| CviJI | RGCY | 6 cut(s) | 19, 76, 87, 100, 228, 327 |
| CviKI_1 | RGCY | 6 cut(s) | 19, 76, 87, 100, 228, 327 |
| DdeI | CTNAG | 1 cut(s) | 224 |
| DpnI | GATC | 2 cut(s) | 9, 267 |
| DpnII | GATC | 2 cut(s) | 7, 265 |
| DraIII | CACNNNGTG | 1 cut(s) | 292 |
| Eam1104I | CTCTTC | 2 cut(s) | 62, 83 |
| EarI | CTCTTC | 2 cut(s) | 62, 83 |
| Ecl136II | GAGCTC | 2 cut(s) | 76, 100 |
| Eco24I | GRGCYC | 2 cut(s) | 78, 102 |
| Eco53kI | GAGCTC | 2 cut(s) | 76, 100 |
| EcoICRI | GAGCTC | 2 cut(s) | 76, 100 |
| EcoT38I | GRGCYC | 2 cut(s) | 78, 102 |
| FaiI | YATR | 4 cut(s) | 84, 90, 291, 305 |
| FblI | GTMKAC | 1 cut(s) | 60 |
| FokI | GGATG | 1 cut(s) | 259 |
| FriOI | GRGCYC | 2 cut(s) | 78, 102 |
| FspBI | CTAG | 1 cut(s) | 20 |
| HapII | CCGG | 1 cut(s) | 193 |
| HincII | GTYRAC | 1 cut(s) | 61 |
| HindII | GTYRAC | 1 cut(s) | 61 |
| HpaII | CCGG | 1 cut(s) | 193 |
| HphI | GGTGA | 1 cut(s) | 124 |
| Hpy166II | GTNNAC | 2 cut(s) | 61, 128 |
| Hpy188I | TCNGA | 1 cut(s) | 16 |
| Hpy8I | GTNNAC | 2 cut(s) | 61, 128 |
| Hpy99I | CGWCG | 1 cut(s) | 62 |
| HpyAV | CCTTC | 1 cut(s) | 55 |
| HpyCH4V | TGCA | 1 cut(s) | 284 |
| HpyF3I | CTNAG | 1 cut(s) | 224 |
| Kzo9I | GATC | 2 cut(s) | 7, 265 |
| LguI | GCTCTTC | 1 cut(s) | 83 |
| LmnI | GCTCC | 2 cut(s) | 73, 105 |
| LpnPI | CCDG | 1 cut(s) | 206 |
| MaeI | CTAG | 1 cut(s) | 20 |
| MalI | GATC | 2 cut(s) | 9, 267 |
| MboI | GATC | 2 cut(s) | 7, 265 |
| MboII | GAAGA | 2 cut(s) | 70, 79 |
| MflI | RGATCY | 1 cut(s) | 7 |
| MhlI | GDGCHC | 2 cut(s) | 78, 102 |
| MluCI | AATT | 2 cut(s) | 31, 255 |
| MnlI | CCTC | 3 cut(s) | 63, 155, 318 |
| MseI | TTAA | 1 cut(s) | 219 |
| MslI | CAYNNNNRTG | 2 cut(s) | 93, 245 |
| MspI | CCGG | 1 cut(s) | 193 |
| MspR9I | CCNGG | 1 cut(s) | 193 |
| NciI | CCSGG | 1 cut(s) | 193 |
| NdeII | GATC | 2 cut(s) | 7, 265 |
| PciSI | GCTCTTC | 1 cut(s) | 83 |
| Psp124BI | GAGCTC | 2 cut(s) | 78, 102 |
| PsuI | RGATCY | 1 cut(s) | 7 |
| RseI | CAYNNNNRTG | 2 cut(s) | 93, 245 |
| SacI | GAGCTC | 2 cut(s) | 78, 102 |
| SalI | GTCGAC | 1 cut(s) | 59 |
| SapI | GCTCTTC | 1 cut(s) | 83 |
| SaqAI | TTAA | 1 cut(s) | 219 |
| Sau3AI | GATC | 2 cut(s) | 7, 265 |
| ScrFI | CCNGG | 1 cut(s) | 193 |
| SduI | GDGCHC | 2 cut(s) | 78, 102 |
| SetI | ASST | 7 cut(s) | 21, 78, 102, 225, 230, 274, 329 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 93, 245 |
| Sse9I | AATT | 2 cut(s) | 31, 255 |
| SsiI | CCGC | 1 cut(s) | 135 |
| SspMI | CTAG | 1 cut(s) | 20 |
| SstI | GAGCTC | 2 cut(s) | 78, 102 |
| StyD4I | CCNGG | 1 cut(s) | 191 |
| TaqI | TCGA | 1 cut(s) | 60 |
| TasI | AATT | 2 cut(s) | 31, 255 |
| Tru1I | TTAA | 1 cut(s) | 219 |
| Tru9I | TTAA | 1 cut(s) | 219 |
| TspGWI | ACGGA | 1 cut(s) | 92 |
| XapI | RAATTY | 1 cut(s) | 31 |
| XmiI | GTMKAC | 1 cut(s) | 60 |
| XspI | CTAG | 1 cut(s) | 20 |