Rroxscaffold_2G00117370

Carboxylesterase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Reverse (-)
45124590 .. 45125705
1116 bp
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UTR
Exon/CDS
Intron
Rroxscaffold_2G00117370.1

Sequence Viewer

Length: 165 bp
ATGCTGGGGCTCATTTCGATTCAACCATTCTTCGACAAAGAGGAGATAACCGAATCAAAGATCCGATTAGGTCGGGGTGCATTGGGTGTGGATTGGACAGACTGTTGTTGGAGGTCGTGGTGGCTTTGGAAGTGGAATATGGCTTTGGTTCATGAGTTGGTGTGA

Protein Analysis

54

Amino Acids

6.47

Weight (kDa)

5.62

Isoelectric Point (pI)

47.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0018983)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 55
AgsI TTSAA 1 cut(s) 23
AjuI GAANNNNNNNTTGG 2 cut(s) 128, 160
AlwI GGATC 1 cut(s) 55
BanII GRGCYC 1 cut(s) 12
BseRI GAGGAG 1 cut(s) 56
BseYI CCCAGC 1 cut(s) 4
Bsp1286I GDGCHC 1 cut(s) 12
Bsp143I GATC 1 cut(s) 60
BspHI TCATGA 1 cut(s) 151
BspPI GGATC 1 cut(s) 55
BssMI GATC 1 cut(s) 60
Bst4CI ACNGT 1 cut(s) 104
BstKTI GATC 1 cut(s) 63
BstMBI GATC 1 cut(s) 60
BstX2I RGATCY 1 cut(s) 60
BstYI RGATCY 1 cut(s) 60
CciI TCATGA 1 cut(s) 151
CviAII CATG 1 cut(s) 152
CviJI RGCY 3 cut(s) 10, 124, 143
CviKI_1 RGCY 3 cut(s) 10, 124, 143
DpnI GATC 1 cut(s) 62
DpnII GATC 1 cut(s) 60
Eco24I GRGCYC 1 cut(s) 12
EcoT38I GRGCYC 1 cut(s) 12
FaeI CATG 1 cut(s) 155
FaiI YATR 2 cut(s) 140, 153
FatI CATG 1 cut(s) 151
FriOI GRGCYC 1 cut(s) 12
GsaI CCCAGC 1 cut(s) 8
Hin1II CATG 1 cut(s) 155
HinfI GANTC 2 cut(s) 19, 53
Hpy188I TCNGA 1 cut(s) 65
Hpy188III TCNNGA 1 cut(s) 152
HpyCH4III ACNGT 1 cut(s) 104
HpyCH4V TGCA 1 cut(s) 80
Hsp92II CATG 1 cut(s) 155
Kzo9I GATC 1 cut(s) 60
MalI GATC 1 cut(s) 62
MboI GATC 1 cut(s) 60
MboII GAAGA 1 cut(s) 22
MflI RGATCY 1 cut(s) 60
MhlI GDGCHC 1 cut(s) 12
MmeI TCCRAC 1 cut(s) 89
MnlI CCTC 2 cut(s) 34, 105
NdeII GATC 1 cut(s) 60
NlaIII CATG 1 cut(s) 155
PagI TCATGA 1 cut(s) 151
PfeI GAWTC 2 cut(s) 19, 53
PspFI CCCAGC 1 cut(s) 4
PsuI RGATCY 1 cut(s) 60
Sau3AI GATC 1 cut(s) 60
SduI GDGCHC 1 cut(s) 12
SetI ASST 2 cut(s) 73, 116
SgeI CNNG 3 cut(s) 17, 86, 129
TaaI ACNGT 1 cut(s) 104
TaqI TCGA 2 cut(s) 17, 33
TfiI GAWTC 2 cut(s) 19, 53
TspDTI ATGAA 1 cut(s) 140
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.