Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0008581

Physical Location & Seq

Genomic Coordinates Reverse (-)

62748353 .. 62754341

Gene Structure 5989 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00127280.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1593 bp

ATGATCTCTACTTATTGTAATTTTGTAGCTATAGCCAATCTTCTTCCGAAACACCTCCACGATAGTCTTCCCCAGCCGGATCCGACCGACCGCAGAAGAGCCGGCGTCGTCCTCCATCCGACGTCGTTTAAGGGATCTTACGGCATTGGCGATCTCGGAGAGGAGGCCTTTCGCTTCATCGACTGGCTACACGACGCCGGATTCTCGCTCTGGCAGGTCCTCCCGCTCGTTCCTCCGGGCCGGAAGGCCAATGAGGAAGGATCACCGTACTCCGGACAGGATGCGAATTGCGGAAACACTTTGTTGATATCTCTTGATGAGCTTGTGAAGGATGGATTGTTGACAAAGGAAGAGCTTCCGAATCCAGTTGATGCGGAGCGTGTGAATTACGCGGCCGTTGCTGACATGAAAGATCCTTTGATAACTAAGGCTGCAGAGAGGCTTATTATGAGTGAAGGTGATCTTAAAAGGCAGCTTGAAGATTTCCGCAGACACCCTGATATATCATGCTGGCTTGAAGATGCAGCTTTTTTTGCAGCAATTGACAGCAGTTTAGATGCTTTTAGCTGGTACGAGTGGCCTGAACCCTTGAAAGATCGTCATCTTGCAGCCTTAGAAGACATTTATCAGAGCAAAGAGCACTTTATAAAGGTATTCATTGCCGAACAATTTTTGTTCCAAAGACAGTGGCAGAGAGTTCGCAAGTATGCACAGTTAAAGGGGATCAGTATCATGGGAGACATGCCCATTTATGTAGGATATCATAGTGCAGATGTTTGGGCCAATAGAAAACATTTTTTGCTGAACAGAAAAGGTTATCCTCTTCTAGTTAGTGGTGTTCCCCCTGACGCCTTCAGTGAAACTGGTCAGCTATGGGGCAGCCCCCTATATGATTGGAAAGCGATGGAGAAAGATGGATTTTCATGGTGGATACGCCGCATACGAAGAGCACAAAACATATATGATGAATTCAGAATAGACCACTTCAGAGGGCTTGCCGGCTTCTGGGCTGTTCCTTCTGAAGCAAAAGTTGCAATGGTTGGAAAATGGAAGGCAGGACCTGGAAAATCCTTTTTTGATGCCATATTCAGAGCAGTTGGGAAGACCAACATAATAGCTGAAGATTTGGGTGTCATCACTGAGGACGTAATTCAGCTCAGGAAGTCCATTGGGGCACCTGGAATGGCCGTACTCCAATTTGCTTTTGGAAGTGATGCTGCTAATCCTCATTTACCTCATAATCATGAGCGCAATCAAGTTGTTTACACTGGAACTCATGATAATGACACGATTCGAGGTTGGTGGGATGTTTTACCCCAAGAAGAGAAGTCCAATGTTCTGAAATATCTTTCAATTAATGAAGAAGAAGGTATCTCGTGGGCAATGATAAAGGTTGCGTTATCTTCTGTCGCCCAAACAGCAATCATGCCTATACAAGATATTCTTAGGTTAGGAAATTCTGCCAGGATGAATATTCCTGCAACACAGTTTGGAAATTGGGGTTGGAGGATGCCTAGTTCCGTGAGCTTTGATAGCCTGGAGACAGAAGCTTTGCTACTGAAGGACATGTTGTCGATGTACGGGCGCCTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000023 GO:0000025 GO:0000272 GO:0003674 GO:0003824 GO:0004133 GO:0004134 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005977 GO:0005982 GO:0005983 GO:0005984 GO:0005996 GO:0006006 GO:0006073 GO:0006091 GO:0006112 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009251 GO:0009311 GO:0009313 GO:0009501 GO:0009507 GO:0009536 GO:0009987 GO:0015980 GO:0016052 GO:0016740 GO:0016757 GO:0016758 GO:0019318 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046352 GO:0055114 GO:0071704 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glyco_hydro_77

Protein Analysis

530

Amino Acids

60.05

Weight (kDa)

5.75

Isoelectric Point (pI)

40.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_77	PF02446	38 - 505	5.3e-154	4-alpha-glucanotransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008581)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64860
fragaria_vesca	FvH4_1g22230 FvH4_1g22230 FvH4_1g22230
malus_domestica	MD15G1333300.v1.1
prunus_persica	Prupe.6G173200_v2.0.a1 Prupe.6G173200_v2.0.a1 Prupe.6G173200_v2.0.a1 Prupe.6G173200_v2.0.a1 Prupe.6G173200_v2.0.a1
pyrus_communis	pycom15g29230
rosa_chinensis	RchiOBHm_Chr2g0116371
rosa_laevigata	RLG00000018263
rosa_multiflora	Rmu_sc0004191.1_g000073 Rmu_sc0037950.1_g000001 Rmu_ssc0000108.1_g000003
rosa_roxburghii	Rroxscaffold_2G00127280
rosa_rugosa	Rorug02G0206000
rosa_samantha	Rh2AG261500 Rh2BG272900 Rh2CG267900 Rh2DG269700
rosa_wichuraiana	Rw2G020520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	647
AatII	GACGTC	1 cut(s)	125
Acc36I	ACCTGC	1 cut(s)	205
AccB1I	GGYRCC	2 cut(s)	1174, 1584
AccBSI	CCGCTC	1 cut(s)	226
AccII	CGCG	1 cut(s)	392
AccIII	TCCGGA	1 cut(s)	272
AciI	CCGC	7 cut(s)	91, 224, 291, 374, 392, 487, 937
AclWI	GGATC	6 cut(s)	74, 87, 142, 268, 407, 731
AcoI	YGGCCR	2 cut(s)	393, 1185
AcsI	RAATTY	2 cut(s)	968, 1456
AcuI	CTGAAG	5 cut(s)	838, 970, 1041, 1140, 1580
AcyI	GRCGYC	5 cut(s)	105, 122, 195, 849, 1585
AfaI	GTAC	4 cut(s)	269, 572, 1191, 1580
AfiI	CCNNNNNNNGG	2 cut(s)	272, 1005
AflIII	ACRYGT	1 cut(s)	1566
AgsI	TTSAA	4 cut(s)	479, 518, 592, 1353
AhdI	GACNNNNNGTC	1 cut(s)	1570
AjnI	CCWGG	4 cut(s)	1060, 1177, 1463, 1536
AjuI	GAANNNNNNNTTGG	2 cut(s)	1486, 1518
AloI	GAACNNNNNNTCC	2 cut(s)	1501, 1533
Alw21I	GWGCWC	2 cut(s)	642, 952
Alw26I	GTCTC	2 cut(s)	732, 1535
AlwI	GGATC	6 cut(s)	74, 87, 142, 268, 407, 731
AlwNI	CAGNNNCTG	1 cut(s)	1061
Aor13HI	TCCGGA	1 cut(s)	272
AoxI	GGCC	7 cut(s)	165, 238, 246, 393, 578, 780, 1185
ApeKI	GCWGC	7 cut(s)	431, 472, 524, 536, 608, 879, 1217
ApoI	RAATTY	2 cut(s)	968, 1456
ArsI	GACNNNNNNTTYG	2 cut(s)	1534, 1566
AseI	ATTAAT	1 cut(s)	1356
Asp700I	GAANNNNTTC	1 cut(s)	354
AspLEI	GCGC	2 cut(s)	1251, 1587
AspS9I	GGNCC	4 cut(s)	217, 238, 780, 1058
AsuC2I	CCSGG	1 cut(s)	237
AsuHPI	GGTGA	2 cut(s)	255, 470
AvaII	GGWCC	2 cut(s)	217, 1058
BaeGI	GKGCMC	1 cut(s)	1177
BamHI	GGATCC	1 cut(s)	79
BanI	GGYRCC	2 cut(s)	1174, 1584
BarI	GAAGNNNNNNTAC	2 cut(s)	1539, 1571
BauI	CACGAG	1 cut(s)	1375
BbsI	GAAGAC	3 cut(s)	59, 624, 1109
Bbv12I	GWGCWC	2 cut(s)	642, 952
BbvI	GCAGC	7 cut(s)	418, 484, 536, 548, 620, 891, 1204
BccI	CCATC	4 cut(s)	123, 326, 898, 908
BceAI	ACGGC	3 cut(s)	157, 380, 1172
BcgI	CGANNNNNNTGC	2 cut(s)	680, 714
BciT130I	CCWGG	4 cut(s)	1062, 1179, 1465, 1538
BciVI	GTATCC	1 cut(s)	924
BcnI	CCSGG	1 cut(s)	237
BcoDI	GTCTC	2 cut(s)	732, 1535
BfaI	CTAG	2 cut(s)	827, 1515
BfmI	CTRYAG	3 cut(s)	30, 432, 1589
BfoI	RGCGCY	1 cut(s)	1588
BfuAI	ACCTGC	1 cut(s)	205
BfuI	GTATCC	1 cut(s)	924
BisI	GCNGC	9 cut(s)	393, 432, 473, 525, 537, 609, 880, 937, 1218
BlsI	GCNGC	9 cut(s)	394, 433, 474, 526, 538, 610, 881, 938, 1219
Bme1390I	CCNGG	5 cut(s)	237, 1062, 1179, 1465, 1538
Bme18I	GGWCC	2 cut(s)	217, 1058
BmeRI	GACNNNNNGTC	1 cut(s)	1570
BmgT120I	GGNCC	4 cut(s)	217, 238, 780, 1058
BmiI	GGNNCC	3 cut(s)	81, 1176, 1586
BmrFI	CCNGG	5 cut(s)	237, 1062, 1179, 1465, 1538
BmsI	GCATC	7 cut(s)	271, 361, 511, 547, 1069, 1204, 1500
BpiI	GAAGAC	3 cut(s)	59, 624, 1109
BpmI	CTGGAG	1 cut(s)	1559
Bpu10I	CCTNAGC	1 cut(s)	1157
BpuMI	CCSGG	1 cut(s)	237
BsaBI	GATNNNNATC	2 cut(s)	600, 728
BsaHI	GRCGYC	5 cut(s)	105, 122, 195, 849, 1585
BsaWI	WCCGGW	1 cut(s)	272
Bsc4I	CCNNNNNNNGG	2 cut(s)	272, 1005
Bse118I	RCCGGY	2 cut(s)	101, 998
Bse1I	ACTGG	4 cut(s)	188, 365, 868, 1273
Bse3DI	GCAATG	3 cut(s)	657, 1041, 1389
Bse8I	GATNNNNATC	2 cut(s)	600, 728
BseAI	TCCGGA	1 cut(s)	272
BseBI	CCWGG	4 cut(s)	1062, 1179, 1465, 1538
BseGI	GGATG	6 cut(s)	115, 286, 337, 1312, 1473, 1515
BseJI	GATNNNNATC	2 cut(s)	600, 728
BseLI	CCNNNNNNNGG	2 cut(s)	272, 1005
BseMI	GCAATG	3 cut(s)	657, 1041, 1389
BseMII	CTCAG	2 cut(s)	1131, 1171
BseNI	ACTGG	4 cut(s)	188, 365, 868, 1273
BseRI	GAGGAG	1 cut(s)	176
BseSI	GKGCMC	1 cut(s)	1177
BseX3I	CGGCCG	1 cut(s)	393
BseXI	GCAGC	7 cut(s)	418, 484, 536, 548, 620, 891, 1204
BseYI	CCCAGC	1 cut(s)	72
BsgI	GTGCAG	1 cut(s)	789
Bsh1236I	CGCG	1 cut(s)	392
Bsh1285I	CGRYCG	3 cut(s)	87, 91, 396
BshFI	GGCC	7 cut(s)	167, 240, 248, 395, 580, 782, 1187
BshNI	GGYRCC	2 cut(s)	1174, 1584
BsiEI	CGRYCG	3 cut(s)	87, 91, 396
BsiHKAI	GWGCWC	2 cut(s)	642, 952
BsiSI	CCGG	7 cut(s)	77, 102, 198, 236, 241, 273, 999
BslI	CCNNNNNNNGG	2 cut(s)	272, 1005
BsmAI	GTCTC	2 cut(s)	732, 1535
BsnI	GGCC	7 cut(s)	167, 240, 248, 395, 580, 782, 1187
Bsp1286I	GDGCHC	3 cut(s)	642, 952, 1177
Bsp13I	TCCGGA	1 cut(s)	272
Bsp143I	GATC	9 cut(s)	3, 79, 134, 151, 260, 412, 460, 595, 723
BspACI	CCGC	7 cut(s)	91, 224, 291, 374, 392, 487, 937
BspANI	GGCC	7 cut(s)	167, 240, 248, 395, 580, 782, 1187
BspCNI	CTCAG	2 cut(s)	1132, 1170
BspEI	TCCGGA	1 cut(s)	272
BspFNI	CGCG	1 cut(s)	392
BspHI	TCATGA	2 cut(s)	1243, 1276
BspLI	GGNNCC	3 cut(s)	81, 1176, 1586
BspMAI	CTGCAG	1 cut(s)	436
BspMI	ACCTGC	1 cut(s)	205
BspPI	GGATC	6 cut(s)	74, 87, 142, 268, 407, 731
BspQI	GCTCTTC	3 cut(s)	91, 345, 940
BspT107I	GGYRCC	2 cut(s)	1174, 1584
BsrBI	CCGCTC	1 cut(s)	226
BsrDI	GCAATG	3 cut(s)	657, 1041, 1389
BsrFI	RCCGGY	2 cut(s)	101, 998
BsrI	ACTGG	4 cut(s)	188, 365, 868, 1273
BssAI	RCCGGY	2 cut(s)	101, 998
BssMI	GATC	9 cut(s)	3, 79, 134, 151, 260, 412, 460, 595, 723
BssNI	GRCGYC	5 cut(s)	105, 122, 195, 849, 1585
BssSI	CACGAG	1 cut(s)	1375
Bst2BI	CACGAG	1 cut(s)	1375
Bst2UI	CCWGG	4 cut(s)	1062, 1179, 1465, 1538
Bst4CI	ACNGT	4 cut(s)	267, 687, 714, 1488
Bst6I	CTCTTC	5 cut(s)	91, 345, 828, 940, 1317
BstACI	GRCGYC	5 cut(s)	105, 122, 195, 849, 1585
BstAPI	GCANNNNNTGC	1 cut(s)	1031
BstC8I	GCNNGC	4 cut(s)	103, 512, 996, 1000
BstDEI	CTNAG	5 cut(s)	426, 613, 1140, 1157, 1445
BstF5I	GGATG	6 cut(s)	115, 286, 337, 1312, 1473, 1515
BstFNI	CGCG	1 cut(s)	392
BstH2I	RGCGCY	1 cut(s)	1588
BstHHI	GCGC	2 cut(s)	1251, 1587
BstKTI	GATC	9 cut(s)	6, 82, 137, 154, 263, 415, 463, 598, 726
BstMAI	GTCTC	2 cut(s)	732, 1535
BstMBI	GATC	9 cut(s)	3, 79, 134, 151, 260, 412, 460, 595, 723
BstMCI	CGRYCG	3 cut(s)	87, 91, 396
BstMWI	GCNNNNNNNGC	5 cut(s)	398, 533, 1031, 1418, 1533
BstNI	CCWGG	4 cut(s)	1062, 1179, 1465, 1538
BstNSI	RCATGY	2 cut(s)	745, 1570
BstSCI	CCNGG	5 cut(s)	235, 1060, 1177, 1463, 1536
BstSFI	CTRYAG	3 cut(s)	30, 432, 1589
BstSLI	GKGCMC	1 cut(s)	1177
BstUI	CGCG	1 cut(s)	392
BstV1I	GCAGC	7 cut(s)	418, 484, 536, 548, 620, 891, 1204
BstV2I	GAAGAC	3 cut(s)	59, 624, 1109
BstX2I	RGATCY	3 cut(s)	79, 134, 412
BstYI	RGATCY	3 cut(s)	79, 134, 412
BstZI	CGGCCG	1 cut(s)	393
BsuI	GTATCC	1 cut(s)	924
BsuRI	GGCC	7 cut(s)	167, 240, 248, 395, 580, 782, 1187
BtgZI	GCGATG	1 cut(s)	917
BtsCI	GGATG	6 cut(s)	115, 286, 337, 1312, 1473, 1515
BtsIMutI	CAGTG	4 cut(s)	692, 862, 1137, 1266
BveI	ACCTGC	1 cut(s)	205
Cac8I	GCNNGC	4 cut(s)	103, 512, 996, 1000
CaiI	CAGNNNCTG	1 cut(s)	1061
CciI	TCATGA	2 cut(s)	1243, 1276
CfoI	GCGC	2 cut(s)	1251, 1587
Cfr10I	RCCGGY	2 cut(s)	101, 998
Cfr13I	GGNCC	4 cut(s)	217, 238, 780, 1058
CseI	GACGC	3 cut(s)	94, 203, 857
Csp6I	GTAC	4 cut(s)	268, 571, 1190, 1579
CspCI	CAANNNNNGTGG	2 cut(s)	668, 703
CviAII	CATG	9 cut(s)	406, 507, 733, 742, 924, 1244, 1277, 1426, 1567
CviQI	GTAC	4 cut(s)	268, 571, 1190, 1579
DdeI	CTNAG	5 cut(s)	426, 613, 1140, 1157, 1445
DinI	GGCGCC	1 cut(s)	1586
DpnI	GATC	9 cut(s)	5, 81, 136, 153, 262, 414, 462, 597, 725
DpnII	GATC	9 cut(s)	3, 79, 134, 151, 260, 412, 460, 595, 723
DriI	GACNNNNNGTC	1 cut(s)	1570
EaeI	YGGCCR	2 cut(s)	393, 1185
EagI	CGGCCG	1 cut(s)	393
Eam1104I	CTCTTC	5 cut(s)	91, 345, 828, 940, 1317
Eam1105I	GACNNNNNGTC	1 cut(s)	1570
EarI	CTCTTC	5 cut(s)	91, 345, 828, 940, 1317
EclXI	CGGCCG	1 cut(s)	393
Eco147I	AGGCCT	1 cut(s)	167
Eco32I	GATATC	2 cut(s)	309, 761
Eco47I	GGWCC	2 cut(s)	217, 1058
Eco52I	CGGCCG	1 cut(s)	393
Eco57I	CTGAAG	5 cut(s)	838, 970, 1041, 1140, 1580
EcoO109I	RGGNCCY	2 cut(s)	217, 1058
EcoRI	GAATTC	1 cut(s)	968
EcoRII	CCWGG	4 cut(s)	1060, 1177, 1463, 1536
EcoRV	GATATC	2 cut(s)	309, 761
EgeI	GGCGCC	1 cut(s)	1586
EheI	GGCGCC	1 cut(s)	1586
FaeI	CATG	9 cut(s)	409, 510, 736, 745, 927, 1247, 1280, 1429, 1570
FalI	AAGNNNNNCTT	4 cut(s)	447, 479, 1428, 1460
FatI	CATG	9 cut(s)	405, 506, 732, 741, 923, 1243, 1276, 1425, 1566
FauI	CCCGC	1 cut(s)	231
Fnu4HI	GCNGC	9 cut(s)	393, 432, 473, 525, 537, 609, 880, 937, 1218
FokI	GGATG	6 cut(s)	102, 293, 344, 1319, 1480, 1522
Fsp4HI	GCNGC	9 cut(s)	393, 432, 473, 525, 537, 609, 880, 937, 1218
FspBI	CTAG	2 cut(s)	827, 1515
GlaI	GCGC	2 cut(s)	1250, 1586
GluI	GCNGC	9 cut(s)	393, 432, 473, 525, 537, 609, 880, 937, 1218
GsaI	CCCAGC	1 cut(s)	76
GsuI	CTGGAG	1 cut(s)	1559
HaeII	RGCGCY	1 cut(s)	1588
HaeIII	GGCC	7 cut(s)	167, 240, 248, 395, 580, 782, 1187
HapII	CCGG	7 cut(s)	77, 102, 198, 236, 241, 273, 999
HgaI	GACGC	3 cut(s)	94, 203, 857
HhaI	GCGC	2 cut(s)	1251, 1587
Hin1I	GRCGYC	5 cut(s)	105, 122, 195, 849, 1585
Hin1II	CATG	9 cut(s)	409, 510, 736, 745, 927, 1247, 1280, 1429, 1570
Hin6I	GCGC	2 cut(s)	1249, 1585
HinP1I	GCGC	2 cut(s)	1249, 1585
HincII	GTYRAC	1 cut(s)	342
HindII	GTYRAC	1 cut(s)	342
HindIII	AAGCTT	1 cut(s)	1548
HinfI	GANTC	3 cut(s)	201, 361, 1291
HpaII	CCGG	7 cut(s)	77, 102, 198, 236, 241, 273, 999
HphI	GGTGA	2 cut(s)	255, 470
Hpy166II	GTNNAC	2 cut(s)	342, 1264
Hpy188III	TCNNGA	5 cut(s)	273, 314, 1159, 1244, 1277
Hpy8I	GTNNAC	2 cut(s)	342, 1264
Hpy99I	CGWCG	4 cut(s)	110, 124, 127, 197
HpyAV	CCTTC	9 cut(s)	238, 251, 322, 449, 862, 1026, 1045, 1361, 1555
HpyCH4III	ACNGT	4 cut(s)	267, 687, 714, 1488
HpyCH4IV	ACGT	2 cut(s)	122, 1146
HpyCH4V	TGCA	8 cut(s)	434, 524, 536, 608, 710, 770, 1034, 1481
HpyF10VI	GCNNNNNNNGC	5 cut(s)	398, 533, 1031, 1418, 1533
HpyF3I	CTNAG	5 cut(s)	426, 613, 1140, 1157, 1445
HpySE526I	ACGT	2 cut(s)	122, 1146
Hsp92I	GRCGYC	5 cut(s)	105, 122, 195, 849, 1585
Hsp92II	CATG	9 cut(s)	409, 510, 736, 745, 927, 1247, 1280, 1429, 1570
HspAI	GCGC	2 cut(s)	1249, 1585
KasI	GGCGCC	1 cut(s)	1584
Kpn2I	TCCGGA	1 cut(s)	272
KroI	GCCGGC	2 cut(s)	101, 998
KroNI	GCCGGC	2 cut(s)	103, 1000
Kzo9I	GATC	9 cut(s)	3, 79, 134, 151, 260, 412, 460, 595, 723
LguI	GCTCTTC	3 cut(s)	91, 345, 940
LmnI	GCTCC	1 cut(s)	376
Lsp1109I	GCAGC	7 cut(s)	418, 484, 536, 548, 620, 891, 1204
LweI	GCATC	7 cut(s)	271, 361, 511, 547, 1069, 1204, 1500
MaeI	CTAG	2 cut(s)	827, 1515
MaeII	ACGT	2 cut(s)	122, 1146
MalI	GATC	9 cut(s)	5, 81, 136, 153, 262, 414, 462, 597, 725
MbiI	CCGCTC	1 cut(s)	226
MboI	GATC	9 cut(s)	3, 79, 134, 151, 260, 412, 460, 595, 723
MfeI	CAATTG	1 cut(s)	540
MflI	RGATCY	3 cut(s)	79, 134, 412
MhlI	GDGCHC	3 cut(s)	642, 952, 1177
Mly113I	GGCGCC	1 cut(s)	1585
MmeI	TCCRAC	4 cut(s)	107, 143, 1021, 1484
MroI	TCCGGA	1 cut(s)	272
MroNI	GCCGGC	2 cut(s)	101, 998
MroXI	GAANNNNTTC	1 cut(s)	354
MseI	TTAA	4 cut(s)	129, 465, 716, 1356
MslI	CAYNNNNRTG	2 cut(s)	1242, 1281
MspI	CCGG	7 cut(s)	77, 102, 198, 236, 241, 273, 999
MspR9I	CCNGG	5 cut(s)	237, 1062, 1179, 1465, 1538
MunI	CAATTG	1 cut(s)	540
MvaI	CCWGG	4 cut(s)	1062, 1179, 1465, 1538
MvnI	CGCG	1 cut(s)	392
MwoI	GCNNNNNNNGC	5 cut(s)	398, 533, 1031, 1418, 1533
NaeI	GCCGGC	2 cut(s)	103, 1000
NarI	GGCGCC	1 cut(s)	1585
NciI	CCSGG	1 cut(s)	237
NdeII	GATC	9 cut(s)	3, 79, 134, 151, 260, 412, 460, 595, 723
NgoMIV	GCCGGC	2 cut(s)	101, 998
NlaIII	CATG	9 cut(s)	409, 510, 736, 745, 927, 1247, 1280, 1429, 1570
NlaIV	GGNNCC	3 cut(s)	81, 1176, 1586
NspI	RCATGY	2 cut(s)	745, 1570
PagI	TCATGA	2 cut(s)	1243, 1276
PceI	AGGCCT	1 cut(s)	167
PciI	ACATGT	1 cut(s)	1566
PciSI	GCTCTTC	3 cut(s)	91, 345, 940
PcsI	WCGNNNNNNNCGW	2 cut(s)	147, 940
PdiI	GCCGGC	2 cut(s)	103, 1000
PdmI	GAANNNNTTC	1 cut(s)	354
PfeI	GAWTC	3 cut(s)	201, 361, 1291
PkrI	GCNGC	9 cut(s)	394, 433, 474, 526, 538, 610, 881, 938, 1219
PluTI	GGCGCC	1 cut(s)	1588
PpuMI	RGGWCCY	2 cut(s)	217, 1058
PscI	ACATGT	1 cut(s)	1566
PshBI	ATTAAT	1 cut(s)	1356
PsiI	TTATAA	1 cut(s)	647
Psp5II	RGGWCCY	2 cut(s)	217, 1058
Psp6I	CCWGG	4 cut(s)	1060, 1177, 1463, 1536
PspFI	CCCAGC	1 cut(s)	72
PspGI	CCWGG	4 cut(s)	1060, 1177, 1463, 1536
PspN4I	GGNNCC	3 cut(s)	81, 1176, 1586
PspPI	GGNCC	4 cut(s)	217, 238, 780, 1058
PspPPI	RGGWCCY	2 cut(s)	217, 1058
PstI	CTGCAG	1 cut(s)	436
PstNI	CAGNNNCTG	1 cut(s)	1061
PsuI	RGATCY	3 cut(s)	79, 134, 412
RsaI	GTAC	4 cut(s)	269, 572, 1191, 1580
RsaNI	GTAC	4 cut(s)	268, 571, 1190, 1579
RseI	CAYNNNNRTG	2 cut(s)	1242, 1281
SapI	GCTCTTC	3 cut(s)	91, 345, 940
SaqAI	TTAA	4 cut(s)	129, 465, 716, 1356
SatI	GCNGC	9 cut(s)	393, 432, 473, 525, 537, 609, 880, 937, 1218
Sau3AI	GATC	9 cut(s)	3, 79, 134, 151, 260, 412, 460, 595, 723
Sau96I	GGNCC	4 cut(s)	217, 238, 780, 1058
ScrFI	CCNGG	5 cut(s)	237, 1062, 1179, 1465, 1538
SduI	GDGCHC	3 cut(s)	642, 952, 1177
SfaNI	GCATC	7 cut(s)	271, 361, 511, 547, 1069, 1204, 1500
SfcI	CTRYAG	3 cut(s)	30, 432, 1589
SfoI	GGCGCC	1 cut(s)	1586
SinI	GGWCC	2 cut(s)	217, 1058
SmiMI	CAYNNNNRTG	2 cut(s)	1242, 1281
SseBI	AGGCCT	1 cut(s)	167
SsiI	CCGC	7 cut(s)	91, 224, 291, 374, 392, 487, 937
SspDI	GGCGCC	1 cut(s)	1584
SspI	AATATT	1 cut(s)	1474
SspMI	CTAG	2 cut(s)	827, 1515
StuI	AGGCCT	1 cut(s)	167
StyD4I	CCNGG	5 cut(s)	235, 1060, 1177, 1463, 1536
TaaI	ACNGT	4 cut(s)	267, 687, 714, 1488
TaiI	ACGT	2 cut(s)	125, 1149
TaqI	TCGA	3 cut(s)	180, 1294, 1574
TaqII	GACCGA	1 cut(s)	101
TauI	GCSGC	2 cut(s)	395, 939
TfiI	GAWTC	3 cut(s)	201, 361, 1291
Tru1I	TTAA	4 cut(s)	129, 465, 716, 1356
Tru9I	TTAA	4 cut(s)	129, 465, 716, 1356
TscAI	CASTG	4 cut(s)	692, 862, 1144, 1273
TseI	GCWGC	7 cut(s)	431, 472, 524, 536, 608, 879, 1217
TspDTI	ATGAA	7 cut(s)	166, 422, 646, 912, 981, 1374, 1484
TspGWI	ACGGA	1 cut(s)	1510
TspRI	CASTG	4 cut(s)	692, 862, 1144, 1273
VpaK11BI	GGWCC	2 cut(s)	217, 1058
VspI	ATTAAT	1 cut(s)	1356
XapI	RAATTY	2 cut(s)	968, 1456
XceI	RCATGY	2 cut(s)	745, 1570
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1202
XmnI	GAANNNNTTC	1 cut(s)	354
XspI	CTAG	2 cut(s)	827, 1515
ZraI	GACGTC	1 cut(s)	123

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.