Rroxscaffold_2G00139180

L-ascorbate oxidase homolog

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
77505769 .. 77508452
2684 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00139180.1

Sequence Viewer

Length: 1554 bp
ATGAGGCCAACCTCTTTCCTGCGTTTTTTTCTTGGAACATTGGTTGGCTTGAGTGCTTTCTGCATCATCAATGCAGAAGACCCTTATAGATATTTTACATGGACAGTTACATACGGATCAGTTTCTCCATTGGGTGTTCCTCGACAGGCTATCCTTATTAATGGTCAATTTCCTGGTCCAACAATTGAGGCTGTGACTAATGACAACATAATCGTTGATGTCATTAATAAGTTGGATGAACCTTTCCTCATTACATGGAATGGAATTAAACAGAGGAAGTCCACATGGGAAGATGGAGTTCTCGGAACCAATTGCCCGATTCCTCCAAACACAAGCTGGAGATACAAGTTTCAAACAAAGGATCAGATTGGAACCTTCAGTTACTTCCCTTCAACGAAACTTCATAGAGCTGCTGGTGGTTTTGGGGGTTTCAATGTGGCACACAGGTCTGTGATAGCTGTCCCATATCCTATACCCGCTGAAGAGTTTACCGTGCTTGTTGGTGATTGGTACAACACTAACCACAAGGTATTGCAACAAAAATTGGACTCTGGCAATCCTCTTCCTCTTCCTGATGGTCTTCTTATAAATGGGCTTCATAGGTCTGCAATCTTCACTGGTCAAGAAGGAAAGACCTACAAATTCAGGATATCAAATGTGGGAATAGCAACTTCAATCAACTTTAGGATTCAGGGTCATACAATGACGCTTGTTGAAGTTGAAGGAGCTAATACCTTGCAAGAGGTGTATGATTCACTTGACGTTCATCCAGGCCAATCTGTAGCTGTTTTGGTCACCTTACACGGTTCAGTCAAGGACTATTTCATTGTGGCCTCTACCCGATTCACAAAGCCCATTCTCACAACCACTGGAATTCTTCGATATGCTGGTTCTAGCATCAAGGCTGCAGGGCCATTGCCTATTGGTCCAACCTATCACATTCACTGGTCTATGAAGCAAGCCAGGACAATCAGATTGAATTTGACAGCAAATGCAGCCAGGCCTAACCCTCAGGGCTCATTCCATTATGGTACCATTAAAGTAGTGAGGACACTTGTTTTAGCCAATTCTGCTACTAAGATCGGTGGCAAGCTTCGCTATGCTGTAAACAAGATATCCTATGTTGATCCAGAGACCCCCTTGAAGCTGGCTGACTGGTTTAACATCCCTGGAGTATTTAACTTCAACACAATCAAGGACACACCTACTCCAGGCCCTGCAAGTTTTGGTGCCTCGGTCATAGGGACCACACTCCATGACTTCGTCGAAATCGTATTCCAGAACACCGAACCCACACTTCAATCTTGGCATCTTGATGGATATAGCTTCTACATTGTTGGATATGGTTCTAAAAATTGGACCCCAGATATGAGGAGACGCTACAATTTGGCAGACGCTGTACCAAGACACACAGTTCAGGTATATCCATTTGGTTGGAGTGCTGTGATGGTGTCTTTGGACAACAAGGGTATGTGGAACTTGAGGTCTGCAATCTGGTCAAGAAGTTACGAGGGTGTGACTGTCAAAAAATTTGGATTGGGGAAACAGGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

517

Amino Acids

57.36

Weight (kDa)

9.56

Isoelectric Point (pI)

30.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 36 - 149 1.1e-39 Multicopper oxidase
Cu-oxidase PF00394 161 - 297 1e-39 Multicopper oxidase
Cu-oxidase_2 PF07731 379 - 504 4.1e-29 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0010983)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 587
Acc65I GGTACC 1 cut(s) 1031
AccB1I GGYRCC 2 cut(s) 1031, 1229
AciI CCGC 1 cut(s) 477
AclWI GGATC 3 cut(s) 124, 369, 1121
AcsI RAATTY 4 cut(s) 641, 873, 979, 1529
AcuI CTGAAG 2 cut(s) 361, 501
AfaI GTAC 3 cut(s) 512, 1033, 1401
AfiI CCNNNNNNNGG 1 cut(s) 1211
AjnI CCWGG 6 cut(s) 172, 769, 962, 998, 1168, 1210
AluBI AGCT 8 cut(s) 336, 410, 458, 728, 785, 1093, 1147, 1326
AluI AGCT 8 cut(s) 336, 410, 458, 728, 785, 1093, 1147, 1326
Alw26I GTCTC 2 cut(s) 1127, 1369
AlwI GGATC 3 cut(s) 124, 369, 1121
AlwNI CAGNNNCTG 2 cut(s) 1217, 1397
AoxI GGCC 6 cut(s) 5, 772, 831, 911, 1001, 1213
ApeKI GCWGC 3 cut(s) 410, 905, 995
ApoI RAATTY 4 cut(s) 641, 873, 979, 1529
AseI ATTAAT 2 cut(s) 159, 225
Asp718I GGTACC 1 cut(s) 1031
AspS9I GGNCC 6 cut(s) 176, 911, 926, 1214, 1245, 1359
AsuHPI GGTGA 2 cut(s) 515, 787
AvaII GGWCC 4 cut(s) 176, 926, 1245, 1359
AxyI CCTNAGG 1 cut(s) 1011
BanI GGYRCC 2 cut(s) 1031, 1229
BanII GRGCYC 1 cut(s) 1019
BbsI GAAGAC 2 cut(s) 84, 572
BbvI GCAGC 3 cut(s) 397, 892, 1007
BccI CCATC 4 cut(s) 287, 569, 1310, 1441
BciT130I CCWGG 6 cut(s) 174, 771, 964, 1000, 1170, 1212
BcoDI GTCTC 2 cut(s) 1127, 1369
BfaI CTAG 1 cut(s) 894
BfmI CTRYAG 2 cut(s) 780, 906
BisI GCNGC 3 cut(s) 411, 906, 996
BlsI GCNGC 3 cut(s) 412, 907, 997
Bme1390I CCNGG 6 cut(s) 174, 771, 964, 1000, 1170, 1212
Bme18I GGWCC 4 cut(s) 176, 926, 1245, 1359
BmgT120I GGNCC 6 cut(s) 176, 911, 926, 1214, 1245, 1359
BmiI GGNNCC 6 cut(s) 307, 373, 1033, 1231, 1246, 1361
BmrFI CCNGG 6 cut(s) 174, 771, 964, 1000, 1170, 1212
BmsI GCATC 3 cut(s) 72, 906, 1318
BpiI GAAGAC 2 cut(s) 84, 572
BpmI CTGGAG 3 cut(s) 358, 1191, 1194
BpuEI CTTGAG 2 cut(s) 70, 1501
BsaI GGTCTC 1 cut(s) 1127
BsaJI CCNNGG 2 cut(s) 1168, 1233
BsaXI ACNNNNNCTCC 2 cut(s) 1192, 1222
Bsc4I CCNNNNNNNGG 1 cut(s) 1211
Bse1I ACTGG 4 cut(s) 622, 874, 950, 1160
Bse21I CCTNAGG 1 cut(s) 1011
Bse3DI GCAATG 1 cut(s) 914
BseBI CCWGG 6 cut(s) 174, 771, 964, 1000, 1170, 1212
BseDI CCNNGG 2 cut(s) 1168, 1233
BseGI GGATG 3 cut(s) 241, 766, 1164
BseLI CCNNNNNNNGG 1 cut(s) 1211
BseMI GCAATG 1 cut(s) 914
BseMII CTCAG 1 cut(s) 1025
BseNI ACTGG 4 cut(s) 622, 874, 950, 1160
BseRI GAGGAG 1 cut(s) 1387
BseXI GCAGC 3 cut(s) 397, 892, 1007
BshFI GGCC 6 cut(s) 7, 774, 833, 913, 1003, 1215
BshNI GGYRCC 2 cut(s) 1031, 1229
BslFI GGGAC 2 cut(s) 446, 1258
BslI CCNNNNNNNGG 1 cut(s) 1211
BsmAI GTCTC 2 cut(s) 1127, 1369
BsmBI CGTCTC 1 cut(s) 1369
BsmFI GGGAC 2 cut(s) 446, 1258
BsnI GGCC 6 cut(s) 7, 774, 833, 913, 1003, 1215
Bso31I GGTCTC 1 cut(s) 1127
Bsp1286I GDGCHC 1 cut(s) 1019
Bsp143I GATC 4 cut(s) 116, 361, 1080, 1126
BspACI CCGC 1 cut(s) 477
BspANI GGCC 6 cut(s) 7, 774, 833, 913, 1003, 1215
BspCNI CTCAG 1 cut(s) 1024
BspLI GGNNCC 6 cut(s) 307, 373, 1033, 1231, 1246, 1361
BspMAI CTGCAG 1 cut(s) 910
BspPI GGATC 3 cut(s) 124, 369, 1121
BspT107I GGYRCC 2 cut(s) 1031, 1229
BspTNI GGTCTC 1 cut(s) 1127
BsrDI GCAATG 1 cut(s) 914
BsrI ACTGG 4 cut(s) 622, 874, 950, 1160
BssECI CCNNGG 2 cut(s) 1168, 1233
BssMI GATC 4 cut(s) 116, 361, 1080, 1126
Bst2UI CCWGG 6 cut(s) 174, 771, 964, 1000, 1170, 1212
Bst4CI ACNGT 5 cut(s) 106, 493, 806, 1414, 1522
Bst6I CTCTTC 3 cut(s) 477, 567, 573
BstC8I GCNNGC 3 cut(s) 960, 1091, 1149
BstDEI CTNAG 3 cut(s) 1011, 1077, 1551
BstEII GGTNACC 1 cut(s) 793
BstENI CCTNNNNNAGG 1 cut(s) 1209
BstF5I GGATG 3 cut(s) 241, 766, 1164
BstKTI GATC 4 cut(s) 119, 364, 1083, 1129
BstMAI GTCTC 2 cut(s) 1127, 1369
BstMBI GATC 4 cut(s) 116, 361, 1080, 1126
BstMWI GCNNNNNNNGC 3 cut(s) 995, 1070, 1095
BstNI CCWGG 6 cut(s) 174, 771, 964, 1000, 1170, 1212
BstPI GGTNACC 1 cut(s) 793
BstSCI CCNGG 6 cut(s) 172, 769, 962, 998, 1168, 1210
BstSFI CTRYAG 2 cut(s) 780, 906
BstV1I GCAGC 3 cut(s) 397, 892, 1007
BstV2I GAAGAC 2 cut(s) 84, 572
BstXI CCANNNNNNTGG 1 cut(s) 1434
Bsu36I CCTNAGG 1 cut(s) 1011
BsuRI GGCC 6 cut(s) 7, 774, 833, 913, 1003, 1215
BtsCI GGATG 3 cut(s) 241, 766, 1164
BtsIMutI CAGTG 3 cut(s) 615, 867, 943
Cac8I GCNNGC 3 cut(s) 960, 1091, 1149
CaiI CAGNNNCTG 2 cut(s) 1217, 1397
Cfr13I GGNCC 6 cut(s) 176, 911, 926, 1214, 1245, 1359
CseI GACGC 3 cut(s) 715, 1386, 1403
Csp6I GTAC 3 cut(s) 511, 1032, 1400
CviAII CATG 4 cut(s) 99, 255, 285, 1256
CviQI GTAC 3 cut(s) 511, 1032, 1400
DdeI CTNAG 3 cut(s) 1011, 1077, 1551
DpnI GATC 4 cut(s) 118, 363, 1082, 1128
DpnII GATC 4 cut(s) 116, 361, 1080, 1126
Eam1104I CTCTTC 3 cut(s) 477, 567, 573
EarI CTCTTC 3 cut(s) 477, 567, 573
Eco147I AGGCCT 1 cut(s) 1003
Eco24I GRGCYC 1 cut(s) 1019
Eco31I GGTCTC 1 cut(s) 1127
Eco32I GATATC 2 cut(s) 651, 1116
Eco47I GGWCC 4 cut(s) 176, 926, 1245, 1359
Eco57I CTGAAG 2 cut(s) 361, 501
Eco81I CCTNAGG 1 cut(s) 1011
Eco91I GGTNACC 1 cut(s) 793
EcoNI CCTNNNNNAGG 1 cut(s) 1209
EcoO109I RGGNCCY 1 cut(s) 1214
EcoO65I GGTNACC 1 cut(s) 793
EcoRI GAATTC 1 cut(s) 873
EcoRII CCWGG 6 cut(s) 172, 769, 962, 998, 1168, 1210
EcoRV GATATC 2 cut(s) 651, 1116
EcoT38I GRGCYC 1 cut(s) 1019
Esp3I CGTCTC 1 cut(s) 1369
FaeI CATG 4 cut(s) 102, 258, 288, 1259
FaqI GGGAC 2 cut(s) 446, 1258
FatI CATG 4 cut(s) 98, 254, 284, 1255
FauI CCCGC 1 cut(s) 484
Fnu4HI GCNGC 3 cut(s) 411, 906, 996
FokI GGATG 3 cut(s) 248, 753, 1151
FriOI GRGCYC 1 cut(s) 1019
Fsp4HI GCNGC 3 cut(s) 411, 906, 996
FspBI CTAG 1 cut(s) 894
GluI GCNGC 3 cut(s) 411, 906, 996
GsuI CTGGAG 3 cut(s) 358, 1191, 1194
HaeIII GGCC 6 cut(s) 7, 774, 833, 913, 1003, 1215
HgaI GACGC 3 cut(s) 715, 1386, 1403
Hin1II CATG 4 cut(s) 102, 258, 288, 1259
HindIII AAGCTT 1 cut(s) 1091
HinfI GANTC 5 cut(s) 319, 548, 688, 752, 843
HphI GGTGA 2 cut(s) 515, 787
Hpy166II GTNNAC 3 cut(s) 282, 489, 1108
Hpy188I TCNGA 3 cut(s) 305, 366, 974
Hpy188III TCNNGA 7 cut(s) 572, 623, 646, 1130, 1279, 1313, 1500
Hpy8I GTNNAC 3 cut(s) 282, 489, 1108
Hpy99I CGWCG 1 cut(s) 1268
HpyAV CCTTC 4 cut(s) 385, 399, 620, 716
HpyCH4III ACNGT 5 cut(s) 106, 493, 806, 1414, 1522
HpyCH4IV ACGT 1 cut(s) 762
HpyCH4V TGCA 9 cut(s) 63, 74, 535, 608, 739, 908, 995, 1220, 1490
HpyF10VI GCNNNNNNNGC 3 cut(s) 995, 1070, 1095
HpyF3I CTNAG 3 cut(s) 1011, 1077, 1551
HpySE526I ACGT 1 cut(s) 762
Hsp92II CATG 4 cut(s) 102, 258, 288, 1259
KpnI GGTACC 1 cut(s) 1035
Kzo9I GATC 4 cut(s) 116, 361, 1080, 1126
LmnI GCTCC 1 cut(s) 725
Lsp1109I GCAGC 3 cut(s) 397, 892, 1007
LweI GCATC 3 cut(s) 72, 906, 1318
MaeI CTAG 1 cut(s) 894
MaeII ACGT 1 cut(s) 762
MaeIII GTNAC 6 cut(s) 106, 193, 380, 793, 1505, 1516
MalI GATC 4 cut(s) 118, 363, 1082, 1128
MboI GATC 4 cut(s) 116, 361, 1080, 1126
MboII GAAGA 8 cut(s) 89, 302, 494, 554, 560, 572, 604, 869
MfeI CAATTG 2 cut(s) 183, 310
MhlI GDGCHC 1 cut(s) 1019
MlyI GAGTC 1 cut(s) 542
MmeI TCCRAC 5 cut(s) 203, 213, 953, 1318, 1415
MseI TTAA 6 cut(s) 159, 225, 267, 1038, 1161, 1179
MslI CAYNNNNRTG 1 cut(s) 1314
MspA1I CMGCKG 1 cut(s) 479
MspR9I CCNGG 6 cut(s) 174, 771, 964, 1000, 1170, 1212
MunI CAATTG 2 cut(s) 183, 310
MvaI CCWGG 6 cut(s) 174, 771, 964, 1000, 1170, 1212
MwoI GCNNNNNNNGC 3 cut(s) 995, 1070, 1095
NdeII GATC 4 cut(s) 116, 361, 1080, 1126
NlaIII CATG 4 cut(s) 102, 258, 288, 1259
NlaIV GGNNCC 6 cut(s) 307, 373, 1033, 1231, 1246, 1361
NmuCI GTSAC 3 cut(s) 193, 793, 1516
PceI AGGCCT 1 cut(s) 1003
PcsI WCGNNNNNNNCGW 1 cut(s) 1269
PfeI GAWTC 4 cut(s) 319, 688, 752, 843
PflFI GACNNNGTC 1 cut(s) 1262
PkrI GCNGC 3 cut(s) 412, 907, 997
PleI GAGTC 1 cut(s) 542
PpsI GAGTC 1 cut(s) 542
PshBI ATTAAT 2 cut(s) 159, 225
PsiI TTATAA 1 cut(s) 587
Psp6I CCWGG 6 cut(s) 172, 769, 962, 998, 1168, 1210
PspEI GGTNACC 1 cut(s) 793
PspGI CCWGG 6 cut(s) 172, 769, 962, 998, 1168, 1210
PspN4I GGNNCC 6 cut(s) 307, 373, 1033, 1231, 1246, 1361
PspPI GGNCC 6 cut(s) 176, 911, 926, 1214, 1245, 1359
PstI CTGCAG 1 cut(s) 910
PstNI CAGNNNCTG 2 cut(s) 1217, 1397
PsyI GACNNNGTC 1 cut(s) 1262
RsaI GTAC 3 cut(s) 512, 1033, 1401
RsaNI GTAC 3 cut(s) 511, 1032, 1400
RseI CAYNNNNRTG 1 cut(s) 1314
SaqAI TTAA 6 cut(s) 159, 225, 267, 1038, 1161, 1179
SatI GCNGC 3 cut(s) 411, 906, 996
Sau3AI GATC 4 cut(s) 116, 361, 1080, 1126
Sau96I GGNCC 6 cut(s) 176, 911, 926, 1214, 1245, 1359
SchI GAGTC 1 cut(s) 542
ScrFI CCNGG 6 cut(s) 174, 771, 964, 1000, 1170, 1212
SduI GDGCHC 1 cut(s) 1019
SfaNI GCATC 3 cut(s) 72, 906, 1318
SfcI CTRYAG 2 cut(s) 780, 906
SinI GGWCC 4 cut(s) 176, 926, 1245, 1359
SmiMI CAYNNNNRTG 1 cut(s) 1314
SmlI CTYRAG 2 cut(s) 49, 1480
SmoI CTYRAG 2 cut(s) 49, 1480
SseBI AGGCCT 1 cut(s) 1003
SsiI CCGC 1 cut(s) 477
SspMI CTAG 1 cut(s) 894
StuI AGGCCT 1 cut(s) 1003
StyD4I CCNGG 6 cut(s) 172, 769, 962, 998, 1168, 1210
TaaI ACNGT 5 cut(s) 106, 493, 806, 1414, 1522
TaiI ACGT 1 cut(s) 765
TaqI TCGA 3 cut(s) 142, 880, 1266
TaqII GACCGA 1 cut(s) 1225
TfiI GAWTC 4 cut(s) 319, 688, 752, 843
Tru1I TTAA 6 cut(s) 159, 225, 267, 1038, 1161, 1179
Tru9I TTAA 6 cut(s) 159, 225, 267, 1038, 1161, 1179
TscAI CASTG 3 cut(s) 622, 874, 950
TseFI GTSAC 3 cut(s) 193, 793, 1516
TseI GCWGC 3 cut(s) 410, 905, 995
Tsp45I GTSAC 3 cut(s) 193, 793, 1516
TspDTI ATGAA 6 cut(s) 252, 392, 587, 755, 814, 968
TspGWI ACGGA 1 cut(s) 129
TspRI CASTG 3 cut(s) 622, 874, 950
Tth111I GACNNNGTC 1 cut(s) 1262
VpaK11BI GGWCC 4 cut(s) 176, 926, 1245, 1359
VspI ATTAAT 2 cut(s) 159, 225
XagI CCTNNNNNAGG 1 cut(s) 1209
XapI RAATTY 4 cut(s) 641, 873, 979, 1529
XcmI CCANNNNNNNNNTGG 1 cut(s) 333
XspI CTAG 1 cut(s) 894
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.