Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0015823

Physical Location & Seq

Genomic Coordinates Reverse (-)

91430737 .. 91433018

Gene Structure 2282 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00155000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1287 bp

ATGGCTGAACAGAAGACCGGAGACGCCGTGCTCCACGGCAAGTACGAGCTGGGGCGAATGCTCGGCCACGGCACCTTCGCCAAAGTGTACCATGCCCGGAACGTAGAGACCGGGAAATCCATGGCCATGAAGGTGGTGGGGAAAGAGAAGGTGATCAGAGTCGGGATGATGGAGCAGATCAAGAGAGAAATATCAGTGATGAGGATGGTGAAGCATCCCAACATCGTCGAGCTCCATGAGGTGATGGCGAGCAAGTCCAAGATCTATTTCGCCATGGATCTGGTCCGAGGCGGCGAGCTTTTTGCTAAAATCGCCAAGGGCCGGCTGAAGGAAGACGTGGCGAGAGTCTATTTCCAGCAGCTCATCTCCGCCATCGATTTCTGCCACAGCCGGGGAGTCTACCACCGGGATCTGAAGCCGGAAAACCTCCTCCTAGATGATGATGGCAACTTGAAGGTGACTGATTTCGGGCTCAGTGCTTTCTCCCAGCACCTAAAGCAAGACGGGCTCTTGCACACCACTTGTGGCACGCCGGCGTATGTAGCGCCGGAGGTGATAGGGAAGAAGGGTTACGACGGAGCCAAAGCGGATCTCTGGTCATGTGGAGTTATTCTTTATGTGCTTCTGGCCGGGTTTCTGCCATTTCAAGATGACAATTTGGTCTCCATGTATAGAAAGATTTACAGGGGAGATTTCAAATGTCCGCCTTGGTTTTCTTCCGAGGCCCGAAGGCTTGTTACGAAGCTTCTGGACCCGAACCCGAGTACCAGAATCTCCGTTTCCAAGATCATGGACTCGTCTTGGTTCAAGAAATCGGTGCCCAAGACGGTGAAGTCTTTCTCAAAGAAAGAGCAGGAGTTCGACGAGACTTCAGAGAAGAATTCGAAGCAGATGGAGACATTGAATGCATTTCATATCATTTCGCTCTCTGAAGGCTTCGACTTGTCTCCTCTGTTCGAGGAGAAGAAGAGGGAGGACAAGGAGGAGCTGAGATTCGCTACGACGCGGTCGGCGAGCACTGTGATATCGAAATTGGAGGAGGTCGCGAAAGCTGGCAAGTTCAGGGTGAAGAAGAGTGACTCCATGGTGAGGCTTCAGGGAGAGGAGAGCGGTAGGAAAGGGAAGCTGGTCATTGCGGCGGAGATTTTCGCCGTAACGCCGTCGTTTCTGGTTGTGGAGGTGAAGAAGGACAATGGTGATACTCTGGAGTACAACCAGTTCTGTAGCAAAGAGCTCAGACCGGCGCTGAAAGACATTGTCTGGACTAATTCGCCCGCCCCTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006950 GO:0006970 GO:0006972 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009628 GO:0009651 GO:0009914 GO:0009926 GO:0009987 GO:0010035 GO:0010540 GO:0010817 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018107 GO:0018193 GO:0018209 GO:0018210 GO:0019538 GO:0023052 GO:0032501 GO:0032502 GO:0035556 GO:0036211 GO:0042221 GO:0042538 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0060918 GO:0065007 GO:0065008 GO:0071704 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04068 ko04140 ko04150 ko04151 ko04152 ko04211 ko04213 ko04371 ko04530 ko04710 ko04714 ko04910 ko04920 ko04921 ko04922 ko04931 ko04932 ko05410 ko05418 map04068 map04140 map04150 map04151 map04152 map04211 map04213 map04371 map04530 map04710 map04714 map04910 map04920 map04921 map04922 map04931 map04932 map05410 map05418

Pfam Domains

Protein Families

NAF Pkinase

Protein Analysis

428

Amino Acids

48.23

Weight (kDa)

9.21

Isoelectric Point (pI)

31.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	15 - 269	4.4e-74	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	16 - 264	1.1e-33	Protein tyrosine and serine/threonine kinase
NAF	PF03822	299 - 358	1.6e-21	NAF domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015823)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G30960
fragaria_vesca	FvH4_1g01070
malus_domestica	MD15G1045200.v1.1 MD15G1153500.v1.1
prunus_persica	Prupe.7G261300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0085831
rosa_laevigata	RLG00000013813 RLG00000015723
rosa_multiflora	Rmu_sc0001748.1_g000016
rosa_roxburghii	Rroxscaffold_2G00155000
rosa_rugosa	Rorug01G0463700
rosa_samantha	Rh2BG013500 Rh2CG014000 Rh2DG015100
rosa_wichuraiana	Rw2G001130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	659, 832
AccB1I	GGYRCC	2 cut(s)	71, 817
AccBSI	CCGCTC	1 cut(s)	1110
AccI	GTMKAC	1 cut(s)	399
AccII	CGCG	2 cut(s)	1006, 1046
AciI	CCGC	9 cut(s)	291, 369, 587, 704, 1006, 1110, 1136, 1139, 1275
AclWI	GGATC	3 cut(s)	285, 417, 597
AcoI	YGGCCR	3 cut(s)	64, 123, 627
AcsI	RAATTY	1 cut(s)	880
AcuI	CTGAAG	5 cut(s)	347, 434, 855, 951, 1079
AcyI	GRCGYC	1 cut(s)	24
AfaI	GTAC	4 cut(s)	44, 89, 766, 1211
AfiI	CCNNNNNNNGG	4 cut(s)	321, 328, 391, 1089
AgsI	TTSAA	5 cut(s)	454, 647, 697, 808, 904
AjiI	CACGTC	1 cut(s)	337
AjuI	GAANNNNNNNTTGG	2 cut(s)	251, 283
AluBI	AGCT	9 cut(s)	49, 232, 298, 361, 745, 988, 1052, 1126, 1234
AluI	AGCT	9 cut(s)	49, 232, 298, 361, 745, 988, 1052, 1126, 1234
Alw21I	GWGCWC	4 cut(s)	33, 234, 1019, 1236
Alw26I	GTCTC	6 cut(s)	15, 101, 667, 860, 890, 951
AlwI	GGATC	3 cut(s)	285, 417, 597
Ama87I	CYCGRG	1 cut(s)	760
AoxI	GGCC	5 cut(s)	64, 123, 319, 627, 723
ApeKI	GCWGC	1 cut(s)	358
ApoI	RAATTY	1 cut(s)	880
Asp700I	GAANNNNTTC	1 cut(s)	836
AspLEI	GCGC	2 cut(s)	547, 1246
AspS9I	GGNCC	4 cut(s)	283, 319, 724, 751
AsuC2I	CCSGG	5 cut(s)	97, 112, 392, 407, 631
AsuII	TTCGAA	1 cut(s)	884
AvaI	CYCGRG	1 cut(s)	760
AvaII	GGWCC	2 cut(s)	283, 751
BaeGI	GKGCMC	1 cut(s)	822
BaeI	ACNNNNGTAYC	2 cut(s)	748, 781
BalI	TGGCCA	1 cut(s)	125
BanI	GGYRCC	2 cut(s)	71, 817
BanII	GRGCYC	4 cut(s)	234, 474, 510, 1236
BarI	GAAGNNNNNNTAC	4 cut(s)	554, 586, 721, 753
BbsI	GAAGAC	2 cut(s)	20, 339
Bbv12I	GWGCWC	4 cut(s)	33, 234, 1019, 1236
BbvI	GCAGC	1 cut(s)	370
BccI	CCATC	6 cut(s)	163, 199, 238, 380, 437, 886
BceAI	ACGGC	5 cut(s)	11, 52, 85, 1136, 1144
BcgI	CGANNNNNNTGC	2 cut(s)	284, 318
BclI	TGATCA	1 cut(s)	153
BcnI	CCSGG	5 cut(s)	97, 112, 392, 407, 631
BcoDI	GTCTC	6 cut(s)	15, 101, 667, 860, 890, 951
BfaI	CTAG	1 cut(s)	434
BfmI	CTRYAG	1 cut(s)	1222
BfoI	RGCGCY	2 cut(s)	548, 1247
BglII	AGATCT	1 cut(s)	261
BisI	GCNGC	3 cut(s)	292, 359, 1137
BlsI	GCNGC	3 cut(s)	293, 360, 1138
Bme1390I	CCNGG	5 cut(s)	97, 112, 392, 407, 631
Bme18I	GGWCC	2 cut(s)	283, 751
BmeT110I	CYCGRG	1 cut(s)	760
BmgBI	CACGTC	1 cut(s)	337
BmgT120I	GGNCC	4 cut(s)	283, 319, 724, 751
BmiI	GGNNCC	4 cut(s)	73, 580, 753, 819
BmrFI	CCNGG	5 cut(s)	97, 112, 392, 407, 631
BmsI	GCATC	1 cut(s)	223
BpiI	GAAGAC	2 cut(s)	20, 339
BpmI	CTGGAG	1 cut(s)	1226
Bpu14I	TTCGAA	1 cut(s)	884
BpuMI	CCSGG	5 cut(s)	97, 112, 392, 407, 631
Bsa29I	ATCGAT	1 cut(s)	375
BsaHI	GRCGYC	1 cut(s)	24
BsaI	GGTCTC	2 cut(s)	101, 667
BsaWI	WCCGGW	1 cut(s)	17
BsaXI	ACNNNNNCTCC	2 cut(s)	12, 42
Bsc4I	CCNNNNNNNGG	4 cut(s)	321, 328, 391, 1089
Bse118I	RCCGGY	3 cut(s)	321, 532, 1240
Bse1I	ACTGG	1 cut(s)	1216
Bse3DI	GCAATG	1 cut(s)	1131
BseCI	ATCGAT	1 cut(s)	375
BseGI	GGATG	3 cut(s)	171, 210, 214
BseLI	CCNNNNNNNGG	4 cut(s)	321, 328, 391, 1089
BseMI	GCAATG	1 cut(s)	1131
BseMII	CTCAG	3 cut(s)	487, 980, 1249
BseNI	ACTGG	1 cut(s)	1216
BseRI	GAGGAG	6 cut(s)	419, 939, 974, 998, 1052, 1118
BseSI	GKGCMC	1 cut(s)	822
BseXI	GCAGC	1 cut(s)	370
BseYI	CCCAGC	2 cut(s)	49, 486
Bsh1236I	CGCG	2 cut(s)	1006, 1046
Bsh1285I	CGRYCG	1 cut(s)	1010
BshFI	GGCC	5 cut(s)	66, 125, 321, 629, 725
BshNI	GGYRCC	2 cut(s)	71, 817
BshVI	ATCGAT	1 cut(s)	375
BsiEI	CGRYCG	1 cut(s)	1010
BsiHKAI	GWGCWC	4 cut(s)	33, 234, 1019, 1236
BsiHKCI	CYCGRG	1 cut(s)	760
BslI	CCNNNNNNNGG	4 cut(s)	321, 328, 391, 1089
BsmAI	GTCTC	6 cut(s)	15, 101, 667, 860, 890, 951
BsmBI	CGTCTC	1 cut(s)	15
BsmI	GAATGC	2 cut(s)	63, 910
BsnI	GGCC	5 cut(s)	66, 125, 321, 629, 725
Bso31I	GGTCTC	2 cut(s)	101, 667
BsoBI	CYCGRG	1 cut(s)	760
Bsp119I	TTCGAA	1 cut(s)	884
Bsp1286I	GDGCHC	7 cut(s)	33, 234, 474, 510, 822, 1019, 1236
Bsp143I	GATC	7 cut(s)	153, 177, 261, 277, 409, 589, 786
Bsp19I	CCATGG	3 cut(s)	120, 273, 1083
Bsp68I	TCGCGA	1 cut(s)	1046
BspACI	CCGC	9 cut(s)	291, 369, 587, 704, 1006, 1110, 1136, 1139, 1275
BspANI	GGCC	5 cut(s)	66, 125, 321, 629, 725
BspCNI	CTCAG	3 cut(s)	486, 981, 1248
BspDI	ATCGAT	1 cut(s)	375
BspFNI	CGCG	2 cut(s)	1006, 1046
BspLI	GGNNCC	4 cut(s)	73, 580, 753, 819
BspPI	GGATC	3 cut(s)	285, 417, 597
BspT104I	TTCGAA	1 cut(s)	884
BspT107I	GGYRCC	2 cut(s)	71, 817
BspTNI	GGTCTC	2 cut(s)	101, 667
BsrBI	CCGCTC	1 cut(s)	1110
BsrDI	GCAATG	1 cut(s)	1131
BsrFI	RCCGGY	3 cut(s)	321, 532, 1240
BsrI	ACTGG	1 cut(s)	1216
BssAI	RCCGGY	3 cut(s)	321, 532, 1240
BssMI	GATC	7 cut(s)	153, 177, 261, 277, 409, 589, 786
BssNI	GRCGYC	1 cut(s)	24
BssT1I	CCWWGG	5 cut(s)	120, 273, 315, 707, 1083
Bst4CI	ACNGT	2 cut(s)	829, 1021
Bst6I	CTCTTC	2 cut(s)	962, 1067
BstACI	GRCGYC	1 cut(s)	24
BstBI	TTCGAA	1 cut(s)	884
BstC8I	GCNNGC	8 cut(s)	250, 296, 323, 530, 534, 1015, 1054, 1275
BstDEI	CTNAG	3 cut(s)	473, 989, 1235
BstDSI	CCRYGG	5 cut(s)	34, 67, 120, 273, 1083
BstF5I	GGATG	3 cut(s)	171, 210, 214
BstFNI	CGCG	2 cut(s)	1006, 1046
BstH2I	RGCGCY	2 cut(s)	548, 1247
BstHHI	GCGC	2 cut(s)	547, 1246
BstKTI	GATC	7 cut(s)	156, 180, 264, 280, 412, 592, 789
BstMAI	GTCTC	6 cut(s)	15, 101, 667, 860, 890, 951
BstMBI	GATC	7 cut(s)	153, 177, 261, 277, 409, 589, 786
BstMCI	CGRYCG	1 cut(s)	1010
BstMWI	GCNNNNNNNGC	4 cut(s)	311, 496, 505, 542
BstSCI	CCNGG	5 cut(s)	95, 110, 390, 405, 629
BstSFI	CTRYAG	1 cut(s)	1222
BstSLI	GKGCMC	1 cut(s)	822
BstUI	CGCG	2 cut(s)	1006, 1046
BstV1I	GCAGC	1 cut(s)	370
BstV2I	GAAGAC	2 cut(s)	20, 339
BstX2I	RGATCY	4 cut(s)	261, 277, 409, 589
BstXI	CCANNNNNNTGG	3 cut(s)	133, 280, 790
BstYI	RGATCY	4 cut(s)	261, 277, 409, 589
Bsu15I	ATCGAT	1 cut(s)	375
BsuRI	GGCC	5 cut(s)	66, 125, 321, 629, 725
BsuTUI	ATCGAT	1 cut(s)	375
BtgI	CCRYGG	5 cut(s)	34, 67, 120, 273, 1083
BtrI	CACGTC	1 cut(s)	337
BtsCI	GGATG	3 cut(s)	171, 210, 214
BtsIMutI	CAGTG	3 cut(s)	201, 481, 1017
BtuMI	TCGCGA	1 cut(s)	1046
Cac8I	GCNNGC	8 cut(s)	250, 296, 323, 530, 534, 1015, 1054, 1275
CfoI	GCGC	2 cut(s)	547, 1246
Cfr10I	RCCGGY	3 cut(s)	321, 532, 1240
Cfr13I	GGNCC	4 cut(s)	283, 319, 724, 751
ClaI	ATCGAT	1 cut(s)	375
CseI	GACGC	2 cut(s)	32, 1012
Csp6I	GTAC	4 cut(s)	43, 88, 765, 1210
CviAII	CATG	9 cut(s)	92, 121, 127, 236, 274, 600, 667, 790, 1084
CviQI	GTAC	4 cut(s)	43, 88, 765, 1210
DdeI	CTNAG	3 cut(s)	473, 989, 1235
DpnI	GATC	7 cut(s)	155, 179, 263, 279, 411, 591, 788
DpnII	GATC	7 cut(s)	153, 177, 261, 277, 409, 589, 786
DrdI	GACNNNNNNGTC	2 cut(s)	659, 832
DseDI	GACNNNNNNGTC	2 cut(s)	659, 832
EaeI	YGGCCR	3 cut(s)	64, 123, 627
Eam1104I	CTCTTC	2 cut(s)	962, 1067
EarI	CTCTTC	2 cut(s)	962, 1067
EciI	GGCGGA	3 cut(s)	358, 693, 1154
Ecl136II	GAGCTC	2 cut(s)	232, 1234
Eco130I	CCWWGG	5 cut(s)	120, 273, 315, 707, 1083
Eco24I	GRGCYC	4 cut(s)	234, 474, 510, 1236
Eco31I	GGTCTC	2 cut(s)	101, 667
Eco32I	GATATC	1 cut(s)	1026
Eco47I	GGWCC	2 cut(s)	283, 751
Eco53kI	GAGCTC	2 cut(s)	232, 1234
Eco57I	CTGAAG	5 cut(s)	347, 434, 855, 951, 1079
Eco88I	CYCGRG	1 cut(s)	760
EcoICRI	GAGCTC	2 cut(s)	232, 1234
EcoRI	GAATTC	1 cut(s)	880
EcoRV	GATATC	1 cut(s)	1026
EcoT14I	CCWWGG	5 cut(s)	120, 273, 315, 707, 1083
EcoT22I	ATGCAT	1 cut(s)	910
EcoT38I	GRGCYC	4 cut(s)	234, 474, 510, 1236
ErhI	CCWWGG	5 cut(s)	120, 273, 315, 707, 1083
Esp3I	CGTCTC	1 cut(s)	15
FaeI	CATG	9 cut(s)	95, 124, 130, 239, 277, 603, 670, 793, 1087
FatI	CATG	9 cut(s)	91, 120, 126, 235, 273, 599, 666, 789, 1083
FauI	CCCGC	1 cut(s)	1282
FbaI	TGATCA	1 cut(s)	153
FblI	GTMKAC	1 cut(s)	399
Fnu4HI	GCNGC	3 cut(s)	292, 359, 1137
FokI	GGATG	3 cut(s)	178, 201, 217
FriOI	GRGCYC	4 cut(s)	234, 474, 510, 1236
Fsp4HI	GCNGC	3 cut(s)	292, 359, 1137
FspBI	CTAG	1 cut(s)	434
GlaI	GCGC	2 cut(s)	546, 1245
GluI	GCNGC	3 cut(s)	292, 359, 1137
GsaI	CCCAGC	2 cut(s)	53, 490
GsuI	CTGGAG	1 cut(s)	1226
HaeII	RGCGCY	2 cut(s)	548, 1247
HaeIII	GGCC	5 cut(s)	66, 125, 321, 629, 725
HgaI	GACGC	2 cut(s)	32, 1012
HhaI	GCGC	2 cut(s)	547, 1246
Hin1I	GRCGYC	1 cut(s)	24
Hin1II	CATG	9 cut(s)	95, 124, 130, 239, 277, 603, 670, 793, 1087
Hin6I	GCGC	2 cut(s)	545, 1244
HinP1I	GCGC	2 cut(s)	545, 1244
HindIII	AAGCTT	1 cut(s)	743
HinfI	GANTC	7 cut(s)	159, 345, 396, 771, 794, 993, 1079
Hpy166II	GTNNAC	2 cut(s)	88, 400
Hpy188I	TCNGA	7 cut(s)	158, 287, 414, 721, 874, 931, 1238
Hpy188III	TCNNGA	8 cut(s)	163, 181, 647, 749, 808, 1045, 1205, 1261
Hpy8I	GTNNAC	2 cut(s)	88, 400
Hpy99I	CGWCG	5 cut(s)	230, 578, 866, 1006, 1165
HpyAV	CCTTC	9 cut(s)	85, 124, 142, 322, 448, 559, 723, 926, 1180
HpyCH4III	ACNGT	2 cut(s)	829, 1021
HpyCH4IV	ACGT	2 cut(s)	102, 336
HpyCH4V	TGCA	2 cut(s)	514, 908
HpyF10VI	GCNNNNNNNGC	4 cut(s)	311, 496, 505, 542
HpyF3I	CTNAG	3 cut(s)	473, 989, 1235
HpySE526I	ACGT	2 cut(s)	102, 336
Hsp92I	GRCGYC	1 cut(s)	24
Hsp92II	CATG	9 cut(s)	95, 124, 130, 239, 277, 603, 670, 793, 1087
HspAI	GCGC	2 cut(s)	545, 1244
KroI	GCCGGC	2 cut(s)	321, 532
KroNI	GCCGGC	2 cut(s)	323, 534
Ksp22I	TGATCA	1 cut(s)	153
Kzo9I	GATC	7 cut(s)	153, 177, 261, 277, 409, 589, 786
LmnI	GCTCC	5 cut(s)	36, 172, 237, 578, 985
Lsp1109I	GCAGC	1 cut(s)	370
LweI	GCATC	1 cut(s)	223
MaeI	CTAG	1 cut(s)	434
MaeII	ACGT	2 cut(s)	102, 336
MaeIII	GTNAC	5 cut(s)	457, 569, 736, 1076, 1153
MalI	GATC	7 cut(s)	155, 179, 263, 279, 411, 591, 788
MbiI	CCGCTC	1 cut(s)	1110
MboI	GATC	7 cut(s)	153, 177, 261, 277, 409, 589, 786
MflI	RGATCY	4 cut(s)	261, 277, 409, 589
MhlI	GDGCHC	7 cut(s)	33, 234, 474, 510, 822, 1019, 1236
MlsI	TGGCCA	1 cut(s)	125
MluCI	AATT	4 cut(s)	655, 880, 1031, 1267
MluNI	TGGCCA	1 cut(s)	125
MlyI	GAGTC	5 cut(s)	168, 354, 405, 788, 1073
Mox20I	TGGCCA	1 cut(s)	125
Mph1103I	ATGCAT	1 cut(s)	910
MreI	CGCCGGCG	1 cut(s)	532
MroNI	GCCGGC	2 cut(s)	321, 532
MroXI	GAANNNNTTC	1 cut(s)	836
MscI	TGGCCA	1 cut(s)	125
MslI	CAYNNNNRTG	2 cut(s)	125, 131
Msp20I	TGGCCA	1 cut(s)	125
MspR9I	CCNGG	5 cut(s)	97, 112, 392, 407, 631
Mva1269I	GAATGC	2 cut(s)	63, 910
MvnI	CGCG	2 cut(s)	1006, 1046
MwoI	GCNNNNNNNGC	4 cut(s)	311, 496, 505, 542
NaeI	GCCGGC	2 cut(s)	323, 534
NciI	CCSGG	5 cut(s)	97, 112, 392, 407, 631
NcoI	CCATGG	3 cut(s)	120, 273, 1083
NdeII	GATC	7 cut(s)	153, 177, 261, 277, 409, 589, 786
NgoMIV	GCCGGC	2 cut(s)	321, 532
NlaIII	CATG	9 cut(s)	95, 124, 130, 239, 277, 603, 670, 793, 1087
NlaIV	GGNNCC	4 cut(s)	73, 580, 753, 819
NmeAIII	GCCGAG	1 cut(s)	42
NmuCI	GTSAC	2 cut(s)	457, 1076
NruI	TCGCGA	1 cut(s)	1046
NsiI	ATGCAT	1 cut(s)	910
NspV	TTCGAA	1 cut(s)	884
PcsI	WCGNNNNNNNCGW	2 cut(s)	42, 1010
PctI	GAATGC	2 cut(s)	63, 910
PdiI	GCCGGC	2 cut(s)	323, 534
PdmI	GAANNNNTTC	1 cut(s)	836
PfeI	GAWTC	2 cut(s)	771, 993
PflFI	GACNNNGTC	2 cut(s)	1006, 1256
PkrI	GCNGC	3 cut(s)	293, 360, 1138
PleI	GAGTC	5 cut(s)	167, 353, 404, 788, 1073
PpsI	GAGTC	5 cut(s)	167, 353, 404, 788, 1073
Psp124BI	GAGCTC	2 cut(s)	234, 1236
PspFI	CCCAGC	2 cut(s)	49, 486
PspN4I	GGNNCC	4 cut(s)	73, 580, 753, 819
PspPI	GGNCC	4 cut(s)	283, 319, 724, 751
PsrI	GAACNNNNNNTAC	2 cut(s)	1202, 1234
PsuI	RGATCY	4 cut(s)	261, 277, 409, 589
PsyI	GACNNNGTC	2 cut(s)	1006, 1256
RruI	TCGCGA	1 cut(s)	1046
RsaI	GTAC	4 cut(s)	44, 89, 766, 1211
RsaNI	GTAC	4 cut(s)	43, 88, 765, 1210
RseI	CAYNNNNRTG	2 cut(s)	125, 131
SacI	GAGCTC	2 cut(s)	234, 1236
SatI	GCNGC	3 cut(s)	292, 359, 1137
Sau3AI	GATC	7 cut(s)	153, 177, 261, 277, 409, 589, 786
Sau96I	GGNCC	4 cut(s)	283, 319, 724, 751
SchI	GAGTC	5 cut(s)	168, 354, 405, 788, 1073
ScrFI	CCNGG	5 cut(s)	97, 112, 392, 407, 631
SduI	GDGCHC	7 cut(s)	33, 234, 474, 510, 822, 1019, 1236
SfaNI	GCATC	1 cut(s)	223
SfcI	CTRYAG	1 cut(s)	1222
SfuI	TTCGAA	1 cut(s)	884
SgrAI	CRCCGGYG	1 cut(s)	532
SinI	GGWCC	2 cut(s)	283, 751
SmiMI	CAYNNNNRTG	2 cut(s)	125, 131
Sse9I	AATT	4 cut(s)	655, 880, 1031, 1267
SsiI	CCGC	9 cut(s)	291, 369, 587, 704, 1006, 1110, 1136, 1139, 1275
SspMI	CTAG	1 cut(s)	434
SstI	GAGCTC	2 cut(s)	234, 1236
StyD4I	CCNGG	5 cut(s)	95, 110, 390, 405, 629
StyI	CCWWGG	5 cut(s)	120, 273, 315, 707, 1083
TaaI	ACNGT	2 cut(s)	829, 1021
TaiI	ACGT	2 cut(s)	105, 339
TaqI	TCGA	7 cut(s)	228, 375, 861, 884, 939, 957, 1028
TasI	AATT	4 cut(s)	655, 880, 1031, 1267
TatI	WGTACW	1 cut(s)	1209
TauI	GCSGC	2 cut(s)	294, 1139
TfiI	GAWTC	2 cut(s)	771, 993
TscAI	CASTG	3 cut(s)	201, 481, 1024
TseFI	GTSAC	2 cut(s)	457, 1076
TseI	GCWGC	1 cut(s)	358
Tsp45I	GTSAC	2 cut(s)	457, 1076
TspDTI	ATGAA	2 cut(s)	143, 902
TspGWI	ACGGA	2 cut(s)	591, 766
TspRI	CASTG	3 cut(s)	201, 481, 1024
Tth111I	GACNNNGTC	2 cut(s)	1006, 1256
VpaK11BI	GGWCC	2 cut(s)	283, 751
XapI	RAATTY	1 cut(s)	880
XcmI	CCANNNNNNNNNTGG	1 cut(s)	133
XmiI	GTMKAC	1 cut(s)	399
XmnI	GAANNNNTTC	1 cut(s)	836
XspI	CTAG	1 cut(s)	434
Zsp2I	ATGCAT	1 cut(s)	910

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.