Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0015823

Physical Location & Seq

Genomic Coordinates Forward (+)

954084 .. 955369

Gene Structure 1286 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G001130.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1239 bp

ATGGCTGAACAGAAGACCGGAGACGCCGTGCTCCACGGCAAGTACGAGCTGGGGCGAATGCTCGGCCACGGCACCTTCGCCAAGGTGTACCATGCCCGGAACGTAGAGACCGGGAAATCCGTGGCCATGAAGGTGGTGGGGAAAGAGAAGGTGATCAAAGTCGGGATGATGGAGCAGATCAAGAGAGAAATATCAGTCATGAGGATGGTGAAACATCCCAACATCGTCGAGCTCCATGAGGTGATGGCGAGCAAGTCCAAGATCTATTTCGCCATGGATCTGGTCCGAGGCGGCGAGCTTTTTGCTAAAATCGCCAAGGGCCGGCTGAAGGAAGACGTGGCAAGAGTCTATTTCCAGCAGCTCATCTCCGCCATCGATTTCTGCCACAGCCGGGGAGTCTACCACCGGGATCTGAAGCCGGAAAACCTCCTCCTAGATGATGACGGCAACTTGAAGGTGACTGACTTCGGGCTCAGTGCTTTCTCCGAGCACCTAAAGCAAGACGGGCTCCTGCACACCACCTGTGGCACGCCGGCGTATGTAGCGCCGGAGGTGATAGGGAAGAAGGGCTACGACGGAGCCAAAGCGGATCTGTGGTCGTATGACAATTTGGTCTCCATGTATAGAAAGATTTACAGGGGAGACTTCAAATGTCCGCCTTGGTTTTCTTCCGAGGCCCGAAGACTTGTTACGAAGCTTCTGGACCCGAACCCGAGTACCAGAATCTCCGTTTCCAAGATCATGGACTCGTCTTGGTTCAAGAAATCGGTGCCCAAGACGGTGAAGTCGTTCTCAAAGAAAGAGCAGGAGTTCGATGAGAGCTCGGAGAAGAATTCGAAGCAGATGGAGACGTTGAATGCATTTCATATCATCTCGCTCTCTGAAGGGTTCGACTTGTCTCCTCTGTTCGAGGAGAAGAAGAGGGAGGAGAAGGAGGAGCTGAGATTCGCTACGACGCGGTCGGCGAGCAGCGTGATATCGAAATTGGAGGAGGTGGCGAAAGCTGGCAAGTTCAGGGTGAAGAAGAGTGACTCCATGGTGAGGCTTCAGGGAGAGGCGAGCGGTAGGAAAGGGAAGCTGGTCATTGCGGCGGAGATTTTCGCCGTAACGCCGTCGTTTCTGGTTGTGGAGGTGAAGAAGGACAATGGTGATACTCTGGAGTACAACCAGTTCTGCAGCAAAGAGCTCAGACCGGCGCTGAAAGACATTGTCTGGACTAACTCGTCCGCCCCTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006950 GO:0006970 GO:0006972 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009628 GO:0009651 GO:0009914 GO:0009926 GO:0009987 GO:0010035 GO:0010540 GO:0010817 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018107 GO:0018193 GO:0018209 GO:0018210 GO:0019538 GO:0023052 GO:0032501 GO:0032502 GO:0035556 GO:0036211 GO:0042221 GO:0042538 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0060918 GO:0065007 GO:0065008 GO:0071704 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04068 ko04140 ko04150 ko04151 ko04152 ko04211 ko04213 ko04371 ko04530 ko04710 ko04714 ko04910 ko04920 ko04921 ko04922 ko04931 ko04932 ko05410 ko05418 map04068 map04140 map04150 map04151 map04152 map04211 map04213 map04371 map04530 map04710 map04714 map04910 map04920 map04921 map04922 map04931 map04932 map05410 map05418

Pfam Domains

Protein Families

NAF Pkinase

Protein Analysis

412

Amino Acids

46.4

Weight (kDa)

9.28

Isoelectric Point (pI)

29.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	15 - 201	1.1e-58	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	16 - 254	1.5e-29	Protein tyrosine and serine/threonine kinase
NAF	PF03822	283 - 342	2.1e-21	NAF domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015823)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G30960
fragaria_vesca	FvH4_1g01070
malus_domestica	MD15G1045200.v1.1 MD15G1153500.v1.1
prunus_persica	Prupe.7G261300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0085831
rosa_laevigata	RLG00000013813 RLG00000015723
rosa_multiflora	Rmu_sc0001748.1_g000016
rosa_roxburghii	Rroxscaffold_2G00155000
rosa_rugosa	Rorug01G0463700
rosa_samantha	Rh2BG013500 Rh2CG014000 Rh2DG015100
rosa_wichuraiana	Rw2G001130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	611, 784, 1222
AccB1I	GGYRCC	2 cut(s)	71, 769
AccBSI	CCGCTC	1 cut(s)	1062
AccI	GTMKAC	1 cut(s)	399
AccII	CGCG	1 cut(s)	958
AciI	CCGC	9 cut(s)	291, 369, 587, 656, 958, 1062, 1088, 1091, 1227
AclWI	GGATC	3 cut(s)	285, 417, 597
AcoI	YGGCCR	2 cut(s)	64, 123
AcsI	RAATTY	1 cut(s)	832
AcuI	CTGAAG	4 cut(s)	347, 434, 903, 1031
AcyI	GRCGYC	1 cut(s)	24
AfaI	GTAC	4 cut(s)	44, 89, 718, 1163
AfiI	CCNNNNNNNGG	4 cut(s)	321, 328, 391, 1041
AgsI	TTSAA	4 cut(s)	454, 649, 760, 856
AjiI	CACGTC	1 cut(s)	337
AjuI	GAANNNNNNNTTGG	2 cut(s)	251, 283
Alw21I	GWGCWC	5 cut(s)	33, 234, 492, 824, 1188
Alw26I	GTCTC	6 cut(s)	15, 101, 619, 636, 842, 903
AlwI	GGATC	3 cut(s)	285, 417, 597
Ama87I	CYCGRG	1 cut(s)	712
AoxI	GGCC	4 cut(s)	64, 123, 319, 675
ApeKI	GCWGC	3 cut(s)	358, 969, 1176
ApoI	RAATTY	1 cut(s)	832
Asp700I	GAANNNNTTC	1 cut(s)	788
AspLEI	GCGC	2 cut(s)	547, 1198
AspS9I	GGNCC	4 cut(s)	283, 319, 676, 703
AsuC2I	CCSGG	4 cut(s)	97, 112, 392, 407
AsuII	TTCGAA	1 cut(s)	836
AvaI	CYCGRG	1 cut(s)	712
AvaII	GGWCC	2 cut(s)	283, 703
BaeGI	GKGCMC	1 cut(s)	774
BaeI	ACNNNNGTAYC	2 cut(s)	700, 733
BalI	TGGCCA	1 cut(s)	125
BanI	GGYRCC	2 cut(s)	71, 769
BanII	GRGCYC	5 cut(s)	234, 474, 510, 824, 1188
BarI	GAAGNNNNNNTAC	4 cut(s)	554, 586, 673, 705
BbsI	GAAGAC	3 cut(s)	20, 339, 688
Bbv12I	GWGCWC	5 cut(s)	33, 234, 492, 824, 1188
BbvI	GCAGC	3 cut(s)	370, 981, 1188
BccI	CCATC	5 cut(s)	163, 199, 238, 380, 838
BceAI	ACGGC	6 cut(s)	11, 52, 85, 460, 1088, 1096
BcgI	CGANNNNNNTGC	2 cut(s)	284, 318
BclI	TGATCA	1 cut(s)	153
BcnI	CCSGG	4 cut(s)	97, 112, 392, 407
BcoDI	GTCTC	6 cut(s)	15, 101, 619, 636, 842, 903
BfaI	CTAG	1 cut(s)	434
BfmI	CTRYAG	1 cut(s)	1174
BfoI	RGCGCY	2 cut(s)	548, 1199
BglII	AGATCT	1 cut(s)	261
BisI	GCNGC	5 cut(s)	292, 359, 970, 1089, 1177
BlsI	GCNGC	5 cut(s)	293, 360, 971, 1090, 1178
Bme1390I	CCNGG	4 cut(s)	97, 112, 392, 407
Bme18I	GGWCC	2 cut(s)	283, 703
BmeT110I	CYCGRG	1 cut(s)	712
BmgBI	CACGTC	1 cut(s)	337
BmgT120I	GGNCC	4 cut(s)	283, 319, 676, 703
BmiI	GGNNCC	5 cut(s)	73, 509, 580, 705, 771
BmrFI	CCNGG	4 cut(s)	97, 112, 392, 407
BpiI	GAAGAC	3 cut(s)	20, 339, 688
BpmI	CTGGAG	1 cut(s)	1178
Bpu14I	TTCGAA	1 cut(s)	836
BpuMI	CCSGG	4 cut(s)	97, 112, 392, 407
Bsa29I	ATCGAT	1 cut(s)	375
BsaHI	GRCGYC	1 cut(s)	24
BsaI	GGTCTC	2 cut(s)	101, 619
BsaWI	WCCGGW	1 cut(s)	17
BsaXI	ACNNNNNCTCC	2 cut(s)	12, 42
Bsc4I	CCNNNNNNNGG	4 cut(s)	321, 328, 391, 1041
Bse118I	RCCGGY	3 cut(s)	321, 532, 1192
Bse1I	ACTGG	1 cut(s)	1168
Bse3DI	GCAATG	1 cut(s)	1083
BseCI	ATCGAT	1 cut(s)	375
BseGI	GGATG	3 cut(s)	171, 210, 214
BseLI	CCNNNNNNNGG	4 cut(s)	321, 328, 391, 1041
BseMI	GCAATG	1 cut(s)	1083
BseMII	CTCAG	3 cut(s)	487, 932, 1201
BseNI	ACTGG	1 cut(s)	1168
BseRI	GAGGAG	6 cut(s)	419, 891, 926, 941, 950, 1004
BseSI	GKGCMC	1 cut(s)	774
BseXI	GCAGC	3 cut(s)	370, 981, 1188
BseYI	CCCAGC	1 cut(s)	49
BsgI	GTGCAG	1 cut(s)	497
Bsh1236I	CGCG	1 cut(s)	958
Bsh1285I	CGRYCG	1 cut(s)	962
BshFI	GGCC	4 cut(s)	66, 125, 321, 677
BshNI	GGYRCC	2 cut(s)	71, 769
BshVI	ATCGAT	1 cut(s)	375
BsiEI	CGRYCG	1 cut(s)	962
BsiHKAI	GWGCWC	5 cut(s)	33, 234, 492, 824, 1188
BsiHKCI	CYCGRG	1 cut(s)	712
BslI	CCNNNNNNNGG	4 cut(s)	321, 328, 391, 1041
BsmAI	GTCTC	6 cut(s)	15, 101, 619, 636, 842, 903
BsmBI	CGTCTC	2 cut(s)	15, 842
BsmI	GAATGC	2 cut(s)	63, 862
BsnI	GGCC	4 cut(s)	66, 125, 321, 677
Bso31I	GGTCTC	2 cut(s)	101, 619
BsoBI	CYCGRG	1 cut(s)	712
Bsp119I	TTCGAA	1 cut(s)	836
Bsp1286I	GDGCHC	8 cut(s)	33, 234, 474, 492, 510, 774, 824, 1188
Bsp143I	GATC	7 cut(s)	153, 177, 261, 277, 409, 589, 738
Bsp19I	CCATGG	2 cut(s)	273, 1035
BspACI	CCGC	9 cut(s)	291, 369, 587, 656, 958, 1062, 1088, 1091, 1227
BspANI	GGCC	4 cut(s)	66, 125, 321, 677
BspCNI	CTCAG	3 cut(s)	486, 933, 1200
BspDI	ATCGAT	1 cut(s)	375
BspFNI	CGCG	1 cut(s)	958
BspHI	TCATGA	1 cut(s)	198
BspLI	GGNNCC	5 cut(s)	73, 509, 580, 705, 771
BspMAI	CTGCAG	1 cut(s)	1178
BspPI	GGATC	3 cut(s)	285, 417, 597
BspT104I	TTCGAA	1 cut(s)	836
BspT107I	GGYRCC	2 cut(s)	71, 769
BspTNI	GGTCTC	2 cut(s)	101, 619
BsrBI	CCGCTC	1 cut(s)	1062
BsrDI	GCAATG	1 cut(s)	1083
BsrFI	RCCGGY	3 cut(s)	321, 532, 1192
BsrI	ACTGG	1 cut(s)	1168
BssAI	RCCGGY	3 cut(s)	321, 532, 1192
BssMI	GATC	7 cut(s)	153, 177, 261, 277, 409, 589, 738
BssNI	GRCGYC	1 cut(s)	24
BssT1I	CCWWGG	5 cut(s)	81, 273, 315, 659, 1035
Bst4CI	ACNGT	1 cut(s)	781
Bst6I	CTCTTC	2 cut(s)	914, 1019
BstACI	GRCGYC	1 cut(s)	24
BstBI	TTCGAA	1 cut(s)	836
BstC8I	GCNNGC	8 cut(s)	250, 296, 323, 530, 534, 967, 1006, 1060
BstDEI	CTNAG	3 cut(s)	473, 941, 1187
BstDSI	CCRYGG	5 cut(s)	34, 67, 120, 273, 1035
BstF5I	GGATG	3 cut(s)	171, 210, 214
BstFNI	CGCG	1 cut(s)	958
BstH2I	RGCGCY	2 cut(s)	548, 1199
BstHHI	GCGC	2 cut(s)	547, 1198
BstKTI	GATC	7 cut(s)	156, 180, 264, 280, 412, 592, 741
BstMAI	GTCTC	6 cut(s)	15, 101, 619, 636, 842, 903
BstMBI	GATC	7 cut(s)	153, 177, 261, 277, 409, 589, 738
BstMCI	CGRYCG	1 cut(s)	962
BstMWI	GCNNNNNNNGC	4 cut(s)	311, 496, 505, 542
BstSCI	CCNGG	4 cut(s)	95, 110, 390, 405
BstSFI	CTRYAG	1 cut(s)	1174
BstSLI	GKGCMC	1 cut(s)	774
BstUI	CGCG	1 cut(s)	958
BstV1I	GCAGC	3 cut(s)	370, 981, 1188
BstV2I	GAAGAC	3 cut(s)	20, 339, 688
BstX2I	RGATCY	4 cut(s)	261, 277, 409, 589
BstXI	CCANNNNNNTGG	3 cut(s)	133, 280, 742
BstYI	RGATCY	4 cut(s)	261, 277, 409, 589
Bsu15I	ATCGAT	1 cut(s)	375
BsuRI	GGCC	4 cut(s)	66, 125, 321, 677
BsuTUI	ATCGAT	1 cut(s)	375
BtgI	CCRYGG	5 cut(s)	34, 67, 120, 273, 1035
BtrI	CACGTC	1 cut(s)	337
BtsCI	GGATG	3 cut(s)	171, 210, 214
BtsIMutI	CAGTG	1 cut(s)	481
Cac8I	GCNNGC	8 cut(s)	250, 296, 323, 530, 534, 967, 1006, 1060
CciI	TCATGA	1 cut(s)	198
CfoI	GCGC	2 cut(s)	547, 1198
Cfr10I	RCCGGY	3 cut(s)	321, 532, 1192
Cfr13I	GGNCC	4 cut(s)	283, 319, 676, 703
ClaI	ATCGAT	1 cut(s)	375
CseI	GACGC	2 cut(s)	32, 964
Csp6I	GTAC	4 cut(s)	43, 88, 717, 1162
CviAII	CATG	8 cut(s)	92, 127, 199, 236, 274, 619, 742, 1036
CviQI	GTAC	4 cut(s)	43, 88, 717, 1162
DdeI	CTNAG	3 cut(s)	473, 941, 1187
DpnI	GATC	7 cut(s)	155, 179, 263, 279, 411, 591, 740
DpnII	GATC	7 cut(s)	153, 177, 261, 277, 409, 589, 738
DrdI	GACNNNNNNGTC	3 cut(s)	611, 784, 1222
DseDI	GACNNNNNNGTC	3 cut(s)	611, 784, 1222
EaeI	YGGCCR	2 cut(s)	64, 123
Eam1104I	CTCTTC	2 cut(s)	914, 1019
EarI	CTCTTC	2 cut(s)	914, 1019
EciI	GGCGGA	4 cut(s)	358, 645, 1106, 1216
Ecl136II	GAGCTC	3 cut(s)	232, 822, 1186
Eco130I	CCWWGG	5 cut(s)	81, 273, 315, 659, 1035
Eco24I	GRGCYC	5 cut(s)	234, 474, 510, 824, 1188
Eco31I	GGTCTC	2 cut(s)	101, 619
Eco32I	GATATC	1 cut(s)	978
Eco47I	GGWCC	2 cut(s)	283, 703
Eco53kI	GAGCTC	3 cut(s)	232, 822, 1186
Eco57I	CTGAAG	4 cut(s)	347, 434, 903, 1031
Eco88I	CYCGRG	1 cut(s)	712
EcoICRI	GAGCTC	3 cut(s)	232, 822, 1186
EcoRI	GAATTC	1 cut(s)	832
EcoRV	GATATC	1 cut(s)	978
EcoT14I	CCWWGG	5 cut(s)	81, 273, 315, 659, 1035
EcoT22I	ATGCAT	1 cut(s)	862
EcoT38I	GRGCYC	5 cut(s)	234, 474, 510, 824, 1188
ErhI	CCWWGG	5 cut(s)	81, 273, 315, 659, 1035
Esp3I	CGTCTC	2 cut(s)	15, 842
FaeI	CATG	8 cut(s)	95, 130, 202, 239, 277, 622, 745, 1039
FatI	CATG	8 cut(s)	91, 126, 198, 235, 273, 618, 741, 1035
FbaI	TGATCA	1 cut(s)	153
FblI	GTMKAC	1 cut(s)	399
Fnu4HI	GCNGC	5 cut(s)	292, 359, 970, 1089, 1177
FokI	GGATG	3 cut(s)	178, 201, 217
FriOI	GRGCYC	5 cut(s)	234, 474, 510, 824, 1188
Fsp4HI	GCNGC	5 cut(s)	292, 359, 970, 1089, 1177
FspBI	CTAG	1 cut(s)	434
GlaI	GCGC	2 cut(s)	546, 1197
GluI	GCNGC	5 cut(s)	292, 359, 970, 1089, 1177
GsaI	CCCAGC	1 cut(s)	53
GsuI	CTGGAG	1 cut(s)	1178
HaeII	RGCGCY	2 cut(s)	548, 1199
HaeIII	GGCC	4 cut(s)	66, 125, 321, 677
HgaI	GACGC	2 cut(s)	32, 964
HhaI	GCGC	2 cut(s)	547, 1198
Hin1I	GRCGYC	1 cut(s)	24
Hin1II	CATG	8 cut(s)	95, 130, 202, 239, 277, 622, 745, 1039
Hin6I	GCGC	2 cut(s)	545, 1196
HinP1I	GCGC	2 cut(s)	545, 1196
HindIII	AAGCTT	1 cut(s)	695
HinfI	GANTC	6 cut(s)	345, 396, 723, 746, 945, 1031
Hpy166II	GTNNAC	2 cut(s)	88, 400
Hpy188I	TCNGA	7 cut(s)	287, 414, 487, 673, 826, 883, 1190
Hpy188III	TCNNGA	7 cut(s)	163, 181, 199, 701, 760, 1157, 1213
Hpy8I	GTNNAC	2 cut(s)	88, 400
Hpy99I	CGWCG	4 cut(s)	230, 578, 958, 1117
HpyAV	CCTTC	9 cut(s)	85, 124, 142, 322, 448, 559, 878, 925, 1132
HpyCH4III	ACNGT	1 cut(s)	781
HpyCH4IV	ACGT	3 cut(s)	102, 336, 851
HpyCH4V	TGCA	3 cut(s)	514, 860, 1176
HpyF10VI	GCNNNNNNNGC	4 cut(s)	311, 496, 505, 542
HpyF3I	CTNAG	3 cut(s)	473, 941, 1187
HpySE526I	ACGT	3 cut(s)	102, 336, 851
Hsp92I	GRCGYC	1 cut(s)	24
Hsp92II	CATG	8 cut(s)	95, 130, 202, 239, 277, 622, 745, 1039
HspAI	GCGC	2 cut(s)	545, 1196
KroI	GCCGGC	2 cut(s)	321, 532
KroNI	GCCGGC	2 cut(s)	323, 534
Ksp22I	TGATCA	1 cut(s)	153
Kzo9I	GATC	7 cut(s)	153, 177, 261, 277, 409, 589, 738
LmnI	GCTCC	6 cut(s)	36, 172, 237, 513, 578, 937
Lsp1109I	GCAGC	3 cut(s)	370, 981, 1188
MaeI	CTAG	1 cut(s)	434
MaeII	ACGT	3 cut(s)	102, 336, 851
MaeIII	GTNAC	4 cut(s)	457, 688, 1028, 1105
MalI	GATC	7 cut(s)	155, 179, 263, 279, 411, 591, 740
MbiI	CCGCTC	1 cut(s)	1062
MboI	GATC	7 cut(s)	153, 177, 261, 277, 409, 589, 738
MflI	RGATCY	4 cut(s)	261, 277, 409, 589
MhlI	GDGCHC	8 cut(s)	33, 234, 474, 492, 510, 774, 824, 1188
MlsI	TGGCCA	1 cut(s)	125
MluCI	AATT	3 cut(s)	607, 832, 983
MluNI	TGGCCA	1 cut(s)	125
MlyI	GAGTC	4 cut(s)	354, 405, 740, 1025
Mox20I	TGGCCA	1 cut(s)	125
Mph1103I	ATGCAT	1 cut(s)	862
MreI	CGCCGGCG	1 cut(s)	532
MroNI	GCCGGC	2 cut(s)	321, 532
MroXI	GAANNNNTTC	1 cut(s)	788
MscI	TGGCCA	1 cut(s)	125
MslI	CAYNNNNRTG	2 cut(s)	131, 203
Msp20I	TGGCCA	1 cut(s)	125
MspR9I	CCNGG	4 cut(s)	97, 112, 392, 407
Mva1269I	GAATGC	2 cut(s)	63, 862
MvnI	CGCG	1 cut(s)	958
MwoI	GCNNNNNNNGC	4 cut(s)	311, 496, 505, 542
NaeI	GCCGGC	2 cut(s)	323, 534
NciI	CCSGG	4 cut(s)	97, 112, 392, 407
NcoI	CCATGG	2 cut(s)	273, 1035
NdeII	GATC	7 cut(s)	153, 177, 261, 277, 409, 589, 738
NgoMIV	GCCGGC	2 cut(s)	321, 532
NlaIII	CATG	8 cut(s)	95, 130, 202, 239, 277, 622, 745, 1039
NlaIV	GGNNCC	5 cut(s)	73, 509, 580, 705, 771
NmeAIII	GCCGAG	1 cut(s)	42
NmuCI	GTSAC	2 cut(s)	457, 1028
NsiI	ATGCAT	1 cut(s)	862
NspV	TTCGAA	1 cut(s)	836
PagI	TCATGA	1 cut(s)	198
PcsI	WCGNNNNNNNCGW	3 cut(s)	42, 785, 962
PctI	GAATGC	2 cut(s)	63, 862
PdiI	GCCGGC	2 cut(s)	323, 534
PdmI	GAANNNNTTC	1 cut(s)	788
PfeI	GAWTC	2 cut(s)	723, 945
PflFI	GACNNNGTC	2 cut(s)	958, 1208
PkrI	GCNGC	5 cut(s)	293, 360, 971, 1090, 1178
PleI	GAGTC	4 cut(s)	353, 404, 740, 1025
PpsI	GAGTC	4 cut(s)	353, 404, 740, 1025
Psp124BI	GAGCTC	3 cut(s)	234, 824, 1188
PspFI	CCCAGC	1 cut(s)	49
PspN4I	GGNNCC	5 cut(s)	73, 509, 580, 705, 771
PspPI	GGNCC	4 cut(s)	283, 319, 676, 703
PsrI	GAACNNNNNNTAC	2 cut(s)	1154, 1186
PstI	CTGCAG	1 cut(s)	1178
PsuI	RGATCY	4 cut(s)	261, 277, 409, 589
PsyI	GACNNNGTC	2 cut(s)	958, 1208
RsaI	GTAC	4 cut(s)	44, 89, 718, 1163
RsaNI	GTAC	4 cut(s)	43, 88, 717, 1162
RseI	CAYNNNNRTG	2 cut(s)	131, 203
SacI	GAGCTC	3 cut(s)	234, 824, 1188
SatI	GCNGC	5 cut(s)	292, 359, 970, 1089, 1177
Sau3AI	GATC	7 cut(s)	153, 177, 261, 277, 409, 589, 738
Sau96I	GGNCC	4 cut(s)	283, 319, 676, 703
SchI	GAGTC	4 cut(s)	354, 405, 740, 1025
ScrFI	CCNGG	4 cut(s)	97, 112, 392, 407
SduI	GDGCHC	8 cut(s)	33, 234, 474, 492, 510, 774, 824, 1188
SfcI	CTRYAG	1 cut(s)	1174
SfuI	TTCGAA	1 cut(s)	836
SgrAI	CRCCGGYG	1 cut(s)	532
SinI	GGWCC	2 cut(s)	283, 703
SmiMI	CAYNNNNRTG	2 cut(s)	131, 203
Sse9I	AATT	3 cut(s)	607, 832, 983
SsiI	CCGC	9 cut(s)	291, 369, 587, 656, 958, 1062, 1088, 1091, 1227
SspMI	CTAG	1 cut(s)	434
SstI	GAGCTC	3 cut(s)	234, 824, 1188
StyD4I	CCNGG	4 cut(s)	95, 110, 390, 405
StyI	CCWWGG	5 cut(s)	81, 273, 315, 659, 1035
TaaI	ACNGT	1 cut(s)	781
TaiI	ACGT	3 cut(s)	105, 339, 854
TaqI	TCGA	7 cut(s)	228, 375, 813, 836, 891, 909, 980
TasI	AATT	3 cut(s)	607, 832, 983
TatI	WGTACW	1 cut(s)	1161
TauI	GCSGC	2 cut(s)	294, 1091
TfiI	GAWTC	2 cut(s)	723, 945
TscAI	CASTG	1 cut(s)	481
TseFI	GTSAC	2 cut(s)	457, 1028
TseI	GCWGC	3 cut(s)	358, 969, 1176
Tsp45I	GTSAC	2 cut(s)	457, 1028
TspDTI	ATGAA	2 cut(s)	143, 854
TspGWI	ACGGA	3 cut(s)	109, 591, 718
TspRI	CASTG	1 cut(s)	481
Tth111I	GACNNNGTC	2 cut(s)	958, 1208
VpaK11BI	GGWCC	2 cut(s)	283, 703
XapI	RAATTY	1 cut(s)	832
XcmI	CCANNNNNNNNNTGG	1 cut(s)	133
XmiI	GTMKAC	1 cut(s)	399
XmnI	GAANNNNTTC	1 cut(s)	788
XspI	CTAG	1 cut(s)	434
Zsp2I	ATGCAT	1 cut(s)	862

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.