Rroxscaffold_3G00224510

Belongs to the mitochondrial carrier (TC 2.A.29) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0011844
Physical Location & Seq
Reverse (-)
7728530 .. 7730048
1519 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00224510.1

Sequence Viewer

Length: 984 bp
ATGGGTGTCAAAGGTTTCGTTGAGGGAGGCATAGCTTCCATCGTCGCCGGCTGCTCCACCCACCCTTTGGATCTCATCAAGGTCCGAATGCAGCTCCAGGGCGAAAAGGGCCTACCCGCCCCGGCCCAGCAGCCCATTCACGCTCTTCGCCCAGCTTTCGCCTTCCATTCCCATTCCGGATCCGCAACCATGGTGGCTCCTCCGCCGCACTTGGTGGCCGCTCCGCCGCGTGCCGGGCCGATCTCCGTCGGGGTCAAGATCTTCCAGACCGAAGGCGTCAAAGCCTTGTTCTCCGGAGTCTCCGCCACAGTGCTCCGCCAGACTCTCTACTCCACCACCCGAATGGGCCTGTACGATATCCTCAAGACCAAGTGGTCCGACCCGGAATCCGGGAACCTTCCTCTGGGGCAAAAGCTTCTCGCCGGACTCATCGCCGGCGGTGTCGGCGCCGCGGTTGGGAACCCCGCCGACGTGGCGATGGTGAGGATGCAGGCCGACGGCCGGCTCCCGGAGGCGCAGCGCCGGAACTACAAGAACGTGGTCGACGCCATCTCAAGGATGGCGAAGCAGGAAGGGGTTACTAGCCTGTGGCGCGGGTCGGGTCTTACGGTGAACCGCGCCATGATCGTGACGGCGTCGCAGCTGGCGTCGTACGACCAGATCAAGGAGGCGATTCTCGAGAGGCACGTGATGGCCGACGGGCTCGGCACGCACGTGACAGCGAGTTTCGCGGCGGGGTTCGTGGCCTCGGTGGCGTCGAACCCGGTGGACGTGATCAAGACTAGGGTGATGAACATGAAGGTGGAGGCCGGGAGGGAGCCGCCGTACACCGGGGCATTGGATTGTGCCCTGAAGACGGTGAAGGCTGAAGGACCCATGGCCCTCTACAAGGGTTTCATTCCTACAATTTCAAGGCAGGGGCCTTTCACTGTGGTGCTGTTTGTGACTCTTGAACAACTCAGGAAGGTTTTCAAGGAGTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Mito_carr

Protein Analysis

327

Amino Acids

34.7

Weight (kDa)

9.79

Isoelectric Point (pI)

27.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mito_carr PF00153 4 - 50 2.2e-07 Mitochondrial carrier protein
Mito_carr PF00153 80 - 126 1.1e-07 Mitochondrial carrier protein
Mito_carr PF00153 133 - 227 4e-21 Mitochondrial carrier protein
Mito_carr PF00153 236 - 325 1.9e-20 Mitochondrial carrier protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011844)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G24570
fragaria_vesca FvH4_5g35620
malus_domestica MD08G1195400.v1.1 MD15G1383200.v1.1
prunus_persica Prupe.1G529200_v2.0.a1 Prupe.8G067800_v2.0.a1
pyrus_communis pycom15g34310
rosa_chinensis RchiOBHm_Chr7g0237101
rosa_laevigata RLG00000001033
rosa_multiflora Rmu_sc0000272.1_g000004 Rmu_sc0002131.1_g000039 Rmu_sc0033615.1_g000001
rosa_roxburghii Rroxscaffold_3G00224510
rosa_rugosa Rorug07G0301800
rosa_samantha Rh7AG458000 Rh7BG428700 Rh7CG476100 Rh7DG445300
rosa_wichuraiana Rw7G037960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 373
AccB1I GGYRCC 1 cut(s) 446
AccB7I CCANNNNNTGG 1 cut(s) 67
AccBSI CCGCTC 1 cut(s) 221
AccI GTMKAC 1 cut(s) 543
AccII CGCG 5 cut(s) 229, 452, 594, 618, 731
AccIII TCCGGA 2 cut(s) 176, 293
AclWI GGATC 3 cut(s) 78, 174, 187
AcoI YGGCCR 3 cut(s) 216, 499, 693
AcuI CTGAAG 2 cut(s) 872, 888
AcvI CACGTG 2 cut(s) 688, 715
AcyI GRCGYC 6 cut(s) 276, 447, 546, 635, 647, 755
AdeI CACNNNGTG 1 cut(s) 214
AfaI GTAC 3 cut(s) 353, 653, 827
AgsI TTSAA 3 cut(s) 912, 953, 973
AjiI CACGTC 2 cut(s) 472, 772
AjnI CCWGG 1 cut(s) 96
AleI CACNNNNGTG 2 cut(s) 713, 932
AluBI AGCT 5 cut(s) 35, 94, 155, 415, 643
AluI AGCT 5 cut(s) 35, 94, 155, 415, 643
Alw21I GWGCWC 1 cut(s) 315
Alw26I GTCTC 1 cut(s) 304
AlwI GGATC 3 cut(s) 78, 174, 187
Ama87I CYCGRG 1 cut(s) 677
Aor13HI TCCGGA 2 cut(s) 176, 293
ApeKI GCWGC 5 cut(s) 51, 91, 130, 517, 640
Asp700I GAANNNNTTC 1 cut(s) 968
AspLEI GCGC 5 cut(s) 449, 517, 522, 594, 620
AspS9I GGNCC 9 cut(s) 82, 109, 124, 236, 346, 375, 872, 880, 920
AsuC2I CCSGG 8 cut(s) 122, 235, 383, 391, 509, 764, 811, 832
AsuHPI GGTGA 4 cut(s) 493, 622, 799, 871
AvaI CYCGRG 1 cut(s) 677
AvaII GGWCC 3 cut(s) 82, 375, 872
BaeGI GKGCMC 1 cut(s) 850
BamHI GGATCC 1 cut(s) 179
BanI GGYRCC 1 cut(s) 446
BanII GRGCYC 1 cut(s) 705
BbrPI CACGTG 2 cut(s) 688, 715
BbsI GAAGAC 1 cut(s) 860
Bbv12I GWGCWC 1 cut(s) 315
BbvI GCAGC 5 cut(s) 38, 103, 142, 529, 652
BccI CCATC 5 cut(s) 47, 472, 553, 557, 685
BceAI ACGGC 3 cut(s) 514, 648, 808
BciT130I CCWGG 1 cut(s) 98
BclI TGATCA 1 cut(s) 774
BcnI CCSGG 8 cut(s) 122, 235, 383, 391, 509, 764, 811, 832
BcoDI GTCTC 1 cut(s) 304
BfaI CTAG 2 cut(s) 582, 783
BfoI RGCGCY 2 cut(s) 450, 523
BglI GCCNNNNNGGC 2 cut(s) 473, 752
BglII AGATCT 1 cut(s) 258
Bme1390I CCNGG 9 cut(s) 98, 122, 235, 383, 391, 509, 764, 811, 832
Bme18I GGWCC 3 cut(s) 82, 375, 872
BmeT110I CYCGRG 1 cut(s) 677
BmgBI CACGTC 2 cut(s) 472, 772
BmgT120I GGNCC 9 cut(s) 82, 109, 124, 236, 346, 375, 872, 880, 920
BmiI GGNNCC 9 cut(s) 181, 198, 395, 448, 461, 506, 819, 874, 921
BmrFI CCNGG 9 cut(s) 98, 122, 235, 383, 391, 509, 764, 811, 832
BmsI GCATC 1 cut(s) 477
BpiI GAAGAC 1 cut(s) 860
BpmI CTGGAG 1 cut(s) 80
BpuEI CTTGAG 2 cut(s) 347, 538
BpuMI CCSGG 8 cut(s) 122, 235, 383, 391, 509, 764, 811, 832
BsaAI YACGTR 2 cut(s) 688, 715
BsaHI GRCGYC 6 cut(s) 276, 447, 546, 635, 647, 755
BsaJI CCNNGG 7 cut(s) 97, 120, 189, 450, 747, 831, 876
BsaWI WCCGGW 2 cut(s) 176, 293
BsaXI ACNNNNNCTCC 2 cut(s) 809, 839
Bse118I RCCGGY 3 cut(s) 47, 434, 501
BseAI TCCGGA 2 cut(s) 176, 293
BseBI CCWGG 1 cut(s) 98
BseDI CCNNGG 7 cut(s) 97, 120, 189, 450, 747, 831, 876
BseGI GGATG 2 cut(s) 492, 564
BseMII CTCAG 1 cut(s) 973
BseRI GAGGAG 1 cut(s) 189
BseSI GKGCMC 1 cut(s) 850
BseX3I CGGCCG 1 cut(s) 499
BseXI GCAGC 5 cut(s) 38, 103, 142, 529, 652
BseYI CCCAGC 2 cut(s) 126, 151
Bsh1236I CGCG 5 cut(s) 229, 452, 594, 618, 731
Bsh1285I CGRYCG 1 cut(s) 502
BshNI GGYRCC 1 cut(s) 446
BsiEI CGRYCG 1 cut(s) 502
BsiHKAI GWGCWC 1 cut(s) 315
BsiHKCI CYCGRG 1 cut(s) 677
BsiWI CGTACG 1 cut(s) 651
BsmAI GTCTC 1 cut(s) 304
BsmI GAATGC 1 cut(s) 93
BsoBI CYCGRG 1 cut(s) 677
Bsp1286I GDGCHC 3 cut(s) 315, 705, 850
Bsp13I TCCGGA 2 cut(s) 176, 293
Bsp143I GATC 7 cut(s) 70, 179, 240, 258, 624, 660, 774
Bsp19I CCATGG 2 cut(s) 189, 876
BspCNI CTCAG 1 cut(s) 972
BspEI TCCGGA 2 cut(s) 176, 293
BspFNI CGCG 5 cut(s) 229, 452, 594, 618, 731
BspLI GGNNCC 9 cut(s) 181, 198, 395, 448, 461, 506, 819, 874, 921
BspPI GGATC 3 cut(s) 78, 174, 187
BspQI GCTCTTC 1 cut(s) 150
BspT107I GGYRCC 1 cut(s) 446
BsrBI CCGCTC 1 cut(s) 221
BsrFI RCCGGY 3 cut(s) 47, 434, 501
BssAI RCCGGY 3 cut(s) 47, 434, 501
BssECI CCNNGG 7 cut(s) 97, 120, 189, 450, 747, 831, 876
BssMI GATC 7 cut(s) 70, 179, 240, 258, 624, 660, 774
BssNI GRCGYC 6 cut(s) 276, 447, 546, 635, 647, 755
BssT1I CCWWGG 2 cut(s) 189, 876
Bst2UI CCWGG 1 cut(s) 98
Bst4CI ACNGT 4 cut(s) 310, 610, 859, 931
Bst6I CTCTTC 1 cut(s) 150
BstACI GRCGYC 6 cut(s) 276, 447, 546, 635, 647, 755
BstBAI YACGTR 2 cut(s) 688, 715
BstC8I GCNNGC 7 cut(s) 49, 231, 436, 492, 503, 645, 710
BstDEI CTNAG 1 cut(s) 959
BstDSI CCRYGG 3 cut(s) 189, 450, 876
BstENI CCTNNNNNAGG 1 cut(s) 887
BstF5I GGATG 2 cut(s) 492, 564
BstFNI CGCG 5 cut(s) 229, 452, 594, 618, 731
BstH2I RGCGCY 2 cut(s) 450, 523
BstHHI GCGC 5 cut(s) 449, 517, 522, 594, 620
BstKTI GATC 7 cut(s) 73, 182, 243, 261, 627, 663, 777
BstMAI GTCTC 1 cut(s) 304
BstMBI GATC 7 cut(s) 70, 179, 240, 258, 624, 660, 774
BstMCI CGRYCG 1 cut(s) 502
BstMWI GCNNNNNNNGC 8 cut(s) 108, 235, 444, 473, 591, 709, 728, 752
BstNI CCWGG 1 cut(s) 98
BstSCI CCNGG 9 cut(s) 96, 120, 233, 381, 389, 507, 762, 809, 830
BstSLI GKGCMC 1 cut(s) 850
BstUI CGCG 5 cut(s) 229, 452, 594, 618, 731
BstV1I GCAGC 5 cut(s) 38, 103, 142, 529, 652
BstV2I GAAGAC 1 cut(s) 860
BstX2I RGATCY 3 cut(s) 70, 179, 258
BstXI CCANNNNNNTGG 1 cut(s) 343
BstYI RGATCY 3 cut(s) 70, 179, 258
BstZI CGGCCG 1 cut(s) 499
BtgI CCRYGG 3 cut(s) 189, 450, 876
BtgZI GCGATG 2 cut(s) 415, 491
BtrI CACGTC 2 cut(s) 472, 772
BtsCI GGATG 2 cut(s) 492, 564
BtsIMutI CAGTG 2 cut(s) 315, 927
Cac8I GCNNGC 7 cut(s) 49, 231, 436, 492, 503, 645, 710
CfoI GCGC 5 cut(s) 449, 517, 522, 594, 620
Cfr10I RCCGGY 3 cut(s) 47, 434, 501
Cfr13I GGNCC 9 cut(s) 82, 109, 124, 236, 346, 375, 872, 880, 920
Cfr42I CCGCGG 1 cut(s) 453
CseI GACGC 5 cut(s) 265, 554, 624, 636, 744
Csp6I GTAC 3 cut(s) 352, 652, 826
CspCI CAANNNNNGTGG 2 cut(s) 174, 209
CviAII CATG 4 cut(s) 190, 622, 796, 877
CviQI GTAC 3 cut(s) 352, 652, 826
DdeI CTNAG 1 cut(s) 959
DinI GGCGCC 1 cut(s) 448
DpnI GATC 7 cut(s) 72, 181, 242, 260, 626, 662, 776
DpnII GATC 7 cut(s) 70, 179, 240, 258, 624, 660, 774
DraIII CACNNNGTG 1 cut(s) 214
DrdI GACNNNNNNGTC 1 cut(s) 373
DseDI GACNNNNNNGTC 1 cut(s) 373
EaeI YGGCCR 3 cut(s) 216, 499, 693
EagI CGGCCG 1 cut(s) 499
Eam1104I CTCTTC 1 cut(s) 150
EarI CTCTTC 1 cut(s) 150
EciI GGCGGA 4 cut(s) 192, 213, 292, 305
EclXI CGGCCG 1 cut(s) 499
Eco130I CCWWGG 2 cut(s) 189, 876
Eco24I GRGCYC 1 cut(s) 705
Eco32I GATATC 1 cut(s) 358
Eco47I GGWCC 3 cut(s) 82, 375, 872
Eco52I CGGCCG 1 cut(s) 499
Eco57I CTGAAG 2 cut(s) 872, 888
Eco72I CACGTG 2 cut(s) 688, 715
Eco88I CYCGRG 1 cut(s) 677
EcoNI CCTNNNNNAGG 1 cut(s) 887
EcoO109I RGGNCCY 3 cut(s) 109, 872, 920
EcoRII CCWGG 1 cut(s) 96
EcoRV GATATC 1 cut(s) 358
EcoT14I CCWWGG 2 cut(s) 189, 876
EcoT38I GRGCYC 1 cut(s) 705
EgeI GGCGCC 1 cut(s) 448
EheI GGCGCC 1 cut(s) 448
ErhI CCWWGG 2 cut(s) 189, 876
FaeI CATG 4 cut(s) 193, 625, 799, 880
FaiI YATR 5 cut(s) 32, 191, 623, 797, 878
FatI CATG 4 cut(s) 189, 621, 795, 876
FauI CCCGC 4 cut(s) 124, 472, 587, 727
FbaI TGATCA 1 cut(s) 774
FblI GTMKAC 1 cut(s) 543
FokI GGATG 2 cut(s) 499, 571
FriOI GRGCYC 1 cut(s) 705
FspBI CTAG 2 cut(s) 582, 783
GlaI GCGC 5 cut(s) 448, 516, 521, 593, 619
GsaI CCCAGC 2 cut(s) 130, 155
GsuI CTGGAG 1 cut(s) 80
HaeII RGCGCY 2 cut(s) 450, 523
HgaI GACGC 5 cut(s) 265, 554, 624, 636, 744
HhaI GCGC 5 cut(s) 449, 517, 522, 594, 620
Hin1I GRCGYC 6 cut(s) 276, 447, 546, 635, 647, 755
Hin1II CATG 4 cut(s) 193, 625, 799, 880
Hin6I GCGC 5 cut(s) 447, 515, 520, 592, 618
HinP1I GCGC 5 cut(s) 447, 515, 520, 592, 618
HincII GTYRAC 1 cut(s) 544
HindII GTYRAC 1 cut(s) 544
HindIII AAGCTT 1 cut(s) 413
HinfI GANTC 6 cut(s) 297, 322, 386, 426, 673, 946
HphI GGTGA 4 cut(s) 493, 622, 799, 871
Hpy166II GTNNAC 4 cut(s) 544, 613, 769, 828
Hpy188I TCNGA 2 cut(s) 86, 379
Hpy8I GTNNAC 4 cut(s) 544, 613, 769, 828
Hpy99I CGWCG 9 cut(s) 47, 251, 473, 500, 548, 640, 652, 701, 760
HpyAV CCTTC 8 cut(s) 172, 266, 407, 566, 793, 856, 863, 958
HpyCH4III ACNGT 4 cut(s) 310, 610, 859, 931
HpyCH4IV ACGT 5 cut(s) 471, 537, 687, 714, 771
HpyCH4V TGCA 2 cut(s) 91, 490
HpyF10VI GCNNNNNNNGC 8 cut(s) 108, 235, 444, 473, 591, 709, 728, 752
HpyF3I CTNAG 1 cut(s) 959
HpySE526I ACGT 5 cut(s) 471, 537, 687, 714, 771
Hsp92I GRCGYC 6 cut(s) 276, 447, 546, 635, 647, 755
Hsp92II CATG 4 cut(s) 193, 625, 799, 880
HspAI GCGC 5 cut(s) 447, 515, 520, 592, 618
KasI GGCGCC 1 cut(s) 446
Kpn2I TCCGGA 2 cut(s) 176, 293
KroI GCCGGC 3 cut(s) 47, 434, 501
KroNI GCCGGC 3 cut(s) 49, 436, 503
Ksp22I TGATCA 1 cut(s) 774
KspI CCGCGG 1 cut(s) 453
Kzo9I GATC 7 cut(s) 70, 179, 240, 258, 624, 660, 774
LguI GCTCTTC 1 cut(s) 150
LmnI GCTCC 7 cut(s) 59, 99, 202, 226, 318, 510, 817
Lsp1109I GCAGC 5 cut(s) 38, 103, 142, 529, 652
LweI GCATC 1 cut(s) 477
MaeI CTAG 2 cut(s) 582, 783
MaeII ACGT 5 cut(s) 471, 537, 687, 714, 771
MaeIII GTNAC 4 cut(s) 577, 628, 715, 943
MalI GATC 7 cut(s) 72, 181, 242, 260, 626, 662, 776
MbiI CCGCTC 1 cut(s) 221
MboI GATC 7 cut(s) 70, 179, 240, 258, 624, 660, 774
MboII GAAGA 3 cut(s) 137, 253, 865
MflI RGATCY 3 cut(s) 70, 179, 258
MhlI GDGCHC 3 cut(s) 315, 705, 850
MluCI AATT 1 cut(s) 906
Mly113I GGCGCC 1 cut(s) 447
MlyI GAGTC 4 cut(s) 306, 316, 420, 940
MmeI TCCRAC 1 cut(s) 402
MreI CGCCGGCG 1 cut(s) 434
MroI TCCGGA 2 cut(s) 176, 293
MroNI GCCGGC 3 cut(s) 47, 434, 501
MroXI GAANNNNTTC 1 cut(s) 968
MslI CAYNNNNRTG 5 cut(s) 341, 626, 713, 800, 932
MspA1I CMGCKG 2 cut(s) 452, 643
MspR9I CCNGG 9 cut(s) 98, 122, 235, 383, 391, 509, 764, 811, 832
MteI GCGCNGCGC 1 cut(s) 518
Mva1269I GAATGC 1 cut(s) 93
MvaI CCWGG 1 cut(s) 98
MvnI CGCG 5 cut(s) 229, 452, 594, 618, 731
MwoI GCNNNNNNNGC 8 cut(s) 108, 235, 444, 473, 591, 709, 728, 752
NaeI GCCGGC 3 cut(s) 49, 436, 503
NarI GGCGCC 1 cut(s) 447
NciI CCSGG 8 cut(s) 122, 235, 383, 391, 509, 764, 811, 832
NcoI CCATGG 2 cut(s) 189, 876
NdeII GATC 7 cut(s) 70, 179, 240, 258, 624, 660, 774
NgoMIV GCCGGC 3 cut(s) 47, 434, 501
NlaIII CATG 4 cut(s) 193, 625, 799, 880
NlaIV GGNNCC 9 cut(s) 181, 198, 395, 448, 461, 506, 819, 874, 921
NmeAIII GCCGAG 1 cut(s) 684
NmuCI GTSAC 3 cut(s) 628, 715, 943
OliI CACNNNNGTG 2 cut(s) 713, 932
PaeR7I CTCGAG 1 cut(s) 677
PciSI GCTCTTC 1 cut(s) 150
PcsI WCGNNNNNNNCGW 5 cut(s) 644, 684, 693, 711, 755
PctI GAATGC 1 cut(s) 93
PdiI GCCGGC 3 cut(s) 49, 436, 503
PdmI GAANNNNTTC 1 cut(s) 968
PfeI GAWTC 2 cut(s) 386, 673
Pfl23II CGTACG 1 cut(s) 651
PflFI GACNNNGTC 1 cut(s) 634
PflMI CCANNNNNTGG 1 cut(s) 67
PfoI TCCNGGA 2 cut(s) 389, 507
PleI GAGTC 4 cut(s) 305, 316, 420, 940
PluTI GGCGCC 1 cut(s) 450
PmaCI CACGTG 2 cut(s) 688, 715
PmlI CACGTG 2 cut(s) 688, 715
PpsI GAGTC 4 cut(s) 305, 316, 420, 940
Ppu21I YACGTR 2 cut(s) 688, 715
PpuMI RGGWCCY 1 cut(s) 872
Psp5II RGGWCCY 1 cut(s) 872
Psp6I CCWGG 1 cut(s) 96
PspCI CACGTG 2 cut(s) 688, 715
PspFI CCCAGC 2 cut(s) 126, 151
PspGI CCWGG 1 cut(s) 96
PspLI CGTACG 1 cut(s) 651
PspN4I GGNNCC 9 cut(s) 181, 198, 395, 448, 461, 506, 819, 874, 921
PspPI GGNCC 9 cut(s) 82, 109, 124, 236, 346, 375, 872, 880, 920
PspPPI RGGWCCY 1 cut(s) 872
PsuI RGATCY 3 cut(s) 70, 179, 258
PsyI GACNNNGTC 1 cut(s) 634
PvuII CAGCTG 1 cut(s) 643
RsaI GTAC 3 cut(s) 353, 653, 827
RsaNI GTAC 3 cut(s) 352, 652, 826
RseI CAYNNNNRTG 5 cut(s) 341, 626, 713, 800, 932
SacII CCGCGG 1 cut(s) 453
SalI GTCGAC 1 cut(s) 542
SapI GCTCTTC 1 cut(s) 150
Sau3AI GATC 7 cut(s) 70, 179, 240, 258, 624, 660, 774
Sau96I GGNCC 9 cut(s) 82, 109, 124, 236, 346, 375, 872, 880, 920
SchI GAGTC 4 cut(s) 306, 316, 420, 940
ScrFI CCNGG 9 cut(s) 98, 122, 235, 383, 391, 509, 764, 811, 832
SduI GDGCHC 3 cut(s) 315, 705, 850
SfaNI GCATC 1 cut(s) 477
SfoI GGCGCC 1 cut(s) 448
Sfr274I CTCGAG 1 cut(s) 677
Sfr303I CCGCGG 1 cut(s) 453
SgrAI CRCCGGYG 1 cut(s) 434
SgrBI CCGCGG 1 cut(s) 453
SinI GGWCC 3 cut(s) 82, 375, 872
SlaI CTCGAG 1 cut(s) 677
SmiMI CAYNNNNRTG 5 cut(s) 341, 626, 713, 800, 932
SmlI CTYRAG 3 cut(s) 362, 553, 677
SmoI CTYRAG 3 cut(s) 362, 553, 677
Sse9I AATT 1 cut(s) 906
SspDI GGCGCC 1 cut(s) 446
SspMI CTAG 2 cut(s) 582, 783
StyD4I CCNGG 9 cut(s) 96, 120, 233, 381, 389, 507, 762, 809, 830
StyI CCWWGG 2 cut(s) 189, 876
TaaI ACNGT 4 cut(s) 310, 610, 859, 931
TaiI ACGT 5 cut(s) 474, 540, 690, 717, 774
TaqI TCGA 3 cut(s) 543, 678, 758
TaqII GACCGA 1 cut(s) 284
TasI AATT 1 cut(s) 906
TauI GCSGC 6 cut(s) 208, 221, 229, 452, 734, 823
TfiI GAWTC 2 cut(s) 386, 673
TscAI CASTG 2 cut(s) 315, 934
TseFI GTSAC 3 cut(s) 628, 715, 943
TseI GCWGC 5 cut(s) 51, 91, 130, 517, 640
Tsp45I GTSAC 3 cut(s) 628, 715, 943
TspDTI ATGAA 3 cut(s) 806, 812, 886
TspGWI ACGGA 1 cut(s) 235
TspRI CASTG 2 cut(s) 315, 934
Tth111I GACNNNGTC 1 cut(s) 634
Van91I CCANNNNNTGG 1 cut(s) 67
VpaK11BI GGWCC 3 cut(s) 82, 375, 872
XagI CCTNNNNNAGG 1 cut(s) 887
XcmI CCANNNNNNNNNTGG 3 cut(s) 64, 340, 556
XhoI CTCGAG 1 cut(s) 677
XmiI GTMKAC 1 cut(s) 543
XmnI GAANNNNTTC 1 cut(s) 968
XspI CTAG 2 cut(s) 582, 783
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.