No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g30481 |
| malus_domestica | MD08G1223500.v1.1 MD15G1417000.v1.1 |
| prunus_persica | Prupe.1G560900_v2.0.a1 |
| pyrus_communis | pycom15g36980 |
| rosa_chinensis | RchiOBHm_Chr7g0225161 |
| rosa_laevigata | RLG00000001842 |
| rosa_multiflora | Rmu_sc0000322.1_g000003 Rmu_sc0003737.1_g000006 |
| rosa_roxburghii | Rroxscaffold_3G00234180 |
| rosa_rugosa | Rorug07G0227700 |
| rosa_samantha | Rh7AG376000 Rh7BG362600 Rh7CG394600 Rh7DG373400 |
| rosa_wichuraiana | Rw7G031500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 14 |
| AcsI | RAATTY | 1 cut(s) | 329 |
| AcuI | CTGAAG | 1 cut(s) | 297 |
| AfaI | GTAC | 1 cut(s) | 297 |
| AgsI | TTSAA | 1 cut(s) | 135 |
| AhlI | ACTAGT | 1 cut(s) | 349 |
| Alw21I | GWGCWC | 1 cut(s) | 60 |
| Alw26I | GTCTC | 1 cut(s) | 167 |
| ApeKI | GCWGC | 1 cut(s) | 119 |
| ApoI | RAATTY | 1 cut(s) | 329 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 450 |
| AspLEI | GCGC | 1 cut(s) | 14 |
| AsuHPI | GGTGA | 1 cut(s) | 36 |
| Bbv12I | GWGCWC | 1 cut(s) | 60 |
| BbvI | GCAGC | 1 cut(s) | 131 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 20, 54 |
| BcoDI | GTCTC | 1 cut(s) | 167 |
| BcuI | ACTAGT | 1 cut(s) | 349 |
| BfaI | CTAG | 2 cut(s) | 299, 350 |
| BisI | GCNGC | 1 cut(s) | 120 |
| BlpI | GCTNAGC | 1 cut(s) | 189 |
| BlsI | GCNGC | 1 cut(s) | 121 |
| BmrI | ACTGGG | 1 cut(s) | 119 |
| BmsI | GCATC | 2 cut(s) | 50, 244 |
| BmuI | ACTGGG | 1 cut(s) | 119 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 189 |
| BpuEI | CTTGAG | 1 cut(s) | 44 |
| Bse118I | RCCGGY | 1 cut(s) | 409 |
| Bse1I | ACTGG | 1 cut(s) | 125 |
| BseMII | CTCAG | 1 cut(s) | 180 |
| BseNI | ACTGG | 1 cut(s) | 125 |
| BseRI | GAGGAG | 1 cut(s) | 353 |
| BseXI | GCAGC | 1 cut(s) | 131 |
| Bsh1236I | CGCG | 1 cut(s) | 14 |
| Bsh1285I | CGRYCG | 1 cut(s) | 234 |
| BsiEI | CGRYCG | 1 cut(s) | 234 |
| BsiHKAI | GWGCWC | 1 cut(s) | 60 |
| BsiSI | CCGG | 1 cut(s) | 410 |
| BsmAI | GTCTC | 1 cut(s) | 167 |
| BsmBI | CGTCTC | 1 cut(s) | 167 |
| Bsp1286I | GDGCHC | 1 cut(s) | 60 |
| Bsp143I | GATC | 1 cut(s) | 420 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 189 |
| BspCNI | CTCAG | 1 cut(s) | 181 |
| BspFNI | CGCG | 1 cut(s) | 14 |
| BspHI | TCATGA | 1 cut(s) | 454 |
| BsrFI | RCCGGY | 1 cut(s) | 409 |
| BsrI | ACTGG | 1 cut(s) | 125 |
| BssAI | RCCGGY | 1 cut(s) | 409 |
| BssMI | GATC | 1 cut(s) | 420 |
| Bst4CI | ACNGT | 2 cut(s) | 310, 507 |
| Bst6I | CTCTTC | 3 cut(s) | 411, 441, 471 |
| BstDEI | CTNAG | 1 cut(s) | 189 |
| BstFNI | CGCG | 1 cut(s) | 14 |
| BstHHI | GCGC | 1 cut(s) | 14 |
| BstKTI | GATC | 1 cut(s) | 423 |
| BstMAI | GTCTC | 1 cut(s) | 167 |
| BstMBI | GATC | 1 cut(s) | 420 |
| BstMCI | CGRYCG | 1 cut(s) | 234 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 47, 278 |
| BstUI | CGCG | 1 cut(s) | 14 |
| BstV1I | GCAGC | 1 cut(s) | 131 |
| CciI | TCATGA | 1 cut(s) | 454 |
| CfoI | GCGC | 1 cut(s) | 14 |
| Cfr10I | RCCGGY | 1 cut(s) | 409 |
| CseI | GACGC | 1 cut(s) | 382 |
| Csp6I | GTAC | 1 cut(s) | 296 |
| CviAII | CATG | 1 cut(s) | 455 |
| CviJI | RGCY | 5 cut(s) | 122, 139, 166, 188, 220 |
| CviKI_1 | RGCY | 5 cut(s) | 122, 139, 166, 188, 220 |
| CviQI | GTAC | 1 cut(s) | 296 |
| DdeI | CTNAG | 1 cut(s) | 189 |
| DpnI | GATC | 1 cut(s) | 422 |
| DpnII | GATC | 1 cut(s) | 420 |
| Eam1104I | CTCTTC | 3 cut(s) | 411, 441, 471 |
| EarI | CTCTTC | 3 cut(s) | 411, 441, 471 |
| Eco32I | GATATC | 3 cut(s) | 361, 400, 460 |
| Eco57I | CTGAAG | 1 cut(s) | 297 |
| EcoRV | GATATC | 3 cut(s) | 361, 400, 460 |
| Esp3I | CGTCTC | 1 cut(s) | 167 |
| FaeI | CATG | 1 cut(s) | 458 |
| FaiI | YATR | 1 cut(s) | 456 |
| FatI | CATG | 1 cut(s) | 454 |
| Fnu4HI | GCNGC | 1 cut(s) | 120 |
| Fsp4HI | GCNGC | 1 cut(s) | 120 |
| FspBI | CTAG | 2 cut(s) | 299, 350 |
| GlaI | GCGC | 1 cut(s) | 13 |
| GluI | GCNGC | 1 cut(s) | 120 |
| HapII | CCGG | 1 cut(s) | 410 |
| HgaI | GACGC | 1 cut(s) | 382 |
| HhaI | GCGC | 1 cut(s) | 14 |
| Hin1II | CATG | 1 cut(s) | 458 |
| Hin6I | GCGC | 1 cut(s) | 12 |
| HinP1I | GCGC | 1 cut(s) | 12 |
| HinfI | GANTC | 1 cut(s) | 451 |
| HpaII | CCGG | 1 cut(s) | 410 |
| HphI | GGTGA | 1 cut(s) | 36 |
| Hpy166II | GTNNAC | 2 cut(s) | 20, 91 |
| Hpy188III | TCNNGA | 4 cut(s) | 61, 403, 455, 463 |
| Hpy8I | GTNNAC | 2 cut(s) | 20, 91 |
| Hpy99I | CGWCG | 2 cut(s) | 398, 428 |
| HpyAV | CCTTC | 2 cut(s) | 58, 172 |
| HpyCH4III | ACNGT | 2 cut(s) | 310, 507 |
| HpyCH4IV | ACGT | 1 cut(s) | 76 |
| HpyCH4V | TGCA | 1 cut(s) | 41 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 47, 278 |
| HpyF3I | CTNAG | 1 cut(s) | 189 |
| HpySE526I | ACGT | 1 cut(s) | 76 |
| Hsp92II | CATG | 1 cut(s) | 458 |
| HspAI | GCGC | 1 cut(s) | 12 |
| Kzo9I | GATC | 1 cut(s) | 420 |
| LpnPI | CCDG | 7 cut(s) | 60, 138, 288, 393, 423, 453, 483 |
| Lsp1109I | GCAGC | 1 cut(s) | 131 |
| LweI | GCATC | 2 cut(s) | 50, 244 |
| MaeI | CTAG | 2 cut(s) | 299, 350 |
| MaeII | ACGT | 1 cut(s) | 76 |
| MaeIII | GTNAC | 1 cut(s) | 310 |
| MalI | GATC | 1 cut(s) | 422 |
| MboI | GATC | 1 cut(s) | 420 |
| MhlI | GDGCHC | 1 cut(s) | 60 |
| MluCI | AATT | 3 cut(s) | 7, 83, 329 |
| MnlI | CCTC | 4 cut(s) | 61, 145, 238, 331 |
| MroXI | GAANNNNTTC | 1 cut(s) | 450 |
| MseI | TTAA | 3 cut(s) | 372, 432, 492 |
| MspI | CCGG | 1 cut(s) | 410 |
| MvnI | CGCG | 1 cut(s) | 14 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 47, 278 |
| NdeII | GATC | 1 cut(s) | 420 |
| NlaIII | CATG | 1 cut(s) | 458 |
| NmeAIII | GCCGAG | 1 cut(s) | 283 |
| PagI | TCATGA | 1 cut(s) | 454 |
| PdmI | GAANNNNTTC | 1 cut(s) | 450 |
| PfeI | GAWTC | 1 cut(s) | 451 |
| PkrI | GCNGC | 1 cut(s) | 121 |
| RsaI | GTAC | 1 cut(s) | 297 |
| RsaNI | GTAC | 1 cut(s) | 296 |
| SaqAI | TTAA | 3 cut(s) | 372, 432, 492 |
| SatI | GCNGC | 1 cut(s) | 120 |
| Sau3AI | GATC | 1 cut(s) | 420 |
| SduI | GDGCHC | 1 cut(s) | 60 |
| SetI | ASST | 4 cut(s) | 79, 156, 183, 277 |
| SfaNI | GCATC | 2 cut(s) | 50, 244 |
| SmlI | CTYRAG | 1 cut(s) | 59 |
| SmoI | CTYRAG | 1 cut(s) | 59 |
| SpeI | ACTAGT | 1 cut(s) | 349 |
| Sse9I | AATT | 3 cut(s) | 7, 83, 329 |
| SspMI | CTAG | 2 cut(s) | 299, 350 |
| TaaI | ACNGT | 2 cut(s) | 310, 507 |
| TaiI | ACGT | 1 cut(s) | 79 |
| TaqI | TCGA | 3 cut(s) | 396, 423, 501 |
| TaqII | GACCGA | 2 cut(s) | 44, 248 |
| TasI | AATT | 3 cut(s) | 7, 83, 329 |
| TfiI | GAWTC | 1 cut(s) | 451 |
| Tru1I | TTAA | 3 cut(s) | 372, 432, 492 |
| Tru9I | TTAA | 3 cut(s) | 372, 432, 492 |
| TseI | GCWGC | 1 cut(s) | 119 |
| TspDTI | ATGAA | 2 cut(s) | 96, 443 |
| XapI | RAATTY | 1 cut(s) | 329 |
| XmnI | GAANNNNTTC | 1 cut(s) | 450 |
| XspI | CTAG | 2 cut(s) | 299, 350 |