No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0387291 RchiOBHm_Chr4g0387311 |
| rosa_roxburghii | Rroxscaffold_3G00234610 |
| rosa_samantha | Rh1CG092700 Rh1DG099300 Rh4AG013300 Rh4AG013800 Rh4AG014300 Rh4AG026500 Rh4AG027100 Rh4BG009700 Rh4BG020100 Rh4CG015900 Rh4DG020700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 150 |
| AclWI | GGATC | 1 cut(s) | 127 |
| AcuI | CTGAAG | 1 cut(s) | 42 |
| AluBI | AGCT | 3 cut(s) | 20, 46, 150 |
| AluI | AGCT | 3 cut(s) | 20, 46, 150 |
| AlwI | GGATC | 1 cut(s) | 127 |
| AoxI | GGCC | 1 cut(s) | 236 |
| ApeKI | GCWGC | 1 cut(s) | 80 |
| AsuHPI | GGTGA | 1 cut(s) | 149 |
| BauI | CACGAG | 1 cut(s) | 202 |
| BbvI | GCAGC | 1 cut(s) | 92 |
| BccI | CCATC | 1 cut(s) | 162 |
| BfaI | CTAG | 3 cut(s) | 17, 47, 191 |
| BfuAI | ACCTGC | 1 cut(s) | 150 |
| BisI | GCNGC | 1 cut(s) | 81 |
| BlsI | GCNGC | 1 cut(s) | 82 |
| BmiI | GGNNCC | 1 cut(s) | 248 |
| Bse1I | ACTGG | 2 cut(s) | 200, 248 |
| BseNI | ACTGG | 2 cut(s) | 200, 248 |
| BseXI | GCAGC | 1 cut(s) | 92 |
| BshFI | GGCC | 1 cut(s) | 238 |
| BsnI | GGCC | 1 cut(s) | 238 |
| Bsp143I | GATC | 2 cut(s) | 84, 132 |
| BspANI | GGCC | 1 cut(s) | 238 |
| BspLI | GGNNCC | 1 cut(s) | 248 |
| BspMI | ACCTGC | 1 cut(s) | 150 |
| BspPI | GGATC | 1 cut(s) | 127 |
| BsrI | ACTGG | 2 cut(s) | 200, 248 |
| BssMI | GATC | 2 cut(s) | 84, 132 |
| BssSI | CACGAG | 1 cut(s) | 202 |
| Bst2BI | CACGAG | 1 cut(s) | 202 |
| Bst4CI | ACNGT | 2 cut(s) | 37, 118 |
| BstC8I | GCNNGC | 1 cut(s) | 188 |
| BstKTI | GATC | 2 cut(s) | 87, 135 |
| BstMBI | GATC | 2 cut(s) | 84, 132 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 17, 196, 205 |
| BstNSI | RCATGY | 1 cut(s) | 190 |
| BstV1I | GCAGC | 1 cut(s) | 92 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 172 |
| BsuRI | GGCC | 1 cut(s) | 238 |
| BveI | ACCTGC | 1 cut(s) | 150 |
| Cac8I | GCNNGC | 1 cut(s) | 188 |
| CviAII | CATG | 3 cut(s) | 103, 130, 187 |
| CviJI | RGCY | 7 cut(s) | 20, 46, 150, 199, 208, 238, 249 |
| CviKI_1 | RGCY | 7 cut(s) | 20, 46, 150, 199, 208, 238, 249 |
| DpnI | GATC | 2 cut(s) | 86, 134 |
| DpnII | GATC | 2 cut(s) | 84, 132 |
| Eco147I | AGGCCT | 1 cut(s) | 238 |
| Eco57I | CTGAAG | 1 cut(s) | 42 |
| FaeI | CATG | 3 cut(s) | 106, 133, 190 |
| FaiI | YATR | 8 cut(s) | 89, 91, 104, 122, 131, 147, 173, 188 |
| FatI | CATG | 3 cut(s) | 102, 129, 186 |
| FauNDI | CATATG | 1 cut(s) | 89 |
| Fnu4HI | GCNGC | 1 cut(s) | 81 |
| Fsp4HI | GCNGC | 1 cut(s) | 81 |
| FspBI | CTAG | 3 cut(s) | 17, 47, 191 |
| GluI | GCNGC | 1 cut(s) | 81 |
| HaeIII | GGCC | 1 cut(s) | 238 |
| Hin1II | CATG | 3 cut(s) | 106, 133, 190 |
| HinfI | GANTC | 1 cut(s) | 220 |
| HphI | GGTGA | 1 cut(s) | 149 |
| Hpy188I | TCNGA | 1 cut(s) | 61 |
| Hpy188III | TCNNGA | 1 cut(s) | 224 |
| HpyCH4III | ACNGT | 2 cut(s) | 37, 118 |
| HpyCH4V | TGCA | 3 cut(s) | 80, 102, 145 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 17, 196, 205 |
| Hsp92II | CATG | 3 cut(s) | 106, 133, 190 |
| Kzo9I | GATC | 2 cut(s) | 84, 132 |
| LmnI | GCTCC | 2 cut(s) | 155, 246 |
| LpnPI | CCDG | 4 cut(s) | 155, 181, 229, 237 |
| Lsp1109I | GCAGC | 1 cut(s) | 92 |
| MaeI | CTAG | 3 cut(s) | 17, 47, 191 |
| MalI | GATC | 2 cut(s) | 86, 134 |
| MboI | GATC | 2 cut(s) | 84, 132 |
| MnlI | CCTC | 2 cut(s) | 99, 228 |
| MslI | CAYNNNNRTG | 1 cut(s) | 170 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 17, 196, 205 |
| NdeI | CATATG | 1 cut(s) | 89 |
| NdeII | GATC | 2 cut(s) | 84, 132 |
| NlaIII | CATG | 3 cut(s) | 106, 133, 190 |
| NlaIV | GGNNCC | 1 cut(s) | 248 |
| NspI | RCATGY | 1 cut(s) | 190 |
| PaeI | GCATGC | 1 cut(s) | 190 |
| PceI | AGGCCT | 1 cut(s) | 238 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 209 |
| PfeI | GAWTC | 1 cut(s) | 220 |
| PkrI | GCNGC | 1 cut(s) | 82 |
| PspN4I | GGNNCC | 1 cut(s) | 248 |
| RseI | CAYNNNNRTG | 1 cut(s) | 170 |
| SatI | GCNGC | 1 cut(s) | 81 |
| Sau3AI | GATC | 2 cut(s) | 84, 132 |
| SetI | ASST | 5 cut(s) | 18, 22, 48, 144, 152 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 170 |
| SphI | GCATGC | 1 cut(s) | 190 |
| SseBI | AGGCCT | 1 cut(s) | 238 |
| SspMI | CTAG | 3 cut(s) | 17, 47, 191 |
| StuI | AGGCCT | 1 cut(s) | 238 |
| TaaI | ACNGT | 2 cut(s) | 37, 118 |
| TfiI | GAWTC | 1 cut(s) | 220 |
| TseI | GCWGC | 1 cut(s) | 80 |
| XceI | RCATGY | 1 cut(s) | 190 |
| XspI | CTAG | 3 cut(s) | 17, 47, 191 |