Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0007853

Physical Location & Seq

Genomic Coordinates Forward (+)

32924196 .. 32932499

Gene Structure 8304 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00240940.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1437 bp

ATGAAACTCATGGCGTGGATCGGAAAAACTCAAGACGTCATCGGCGACGGCGAATCGGGTTACGAGGCCGCGGCGGCTTTGAGATCGACGGCAATACATAGAGATGCTTTAACAAGACCAAATTCAATTTTTAGGGTTTTGGGGAGCTCTGAAACCCGGCATTTTTGCTCTTCTGGTTTCTGCAAAAGTGCAAATATGCGCTCAAAGGACAGAATCTCCTACTTCTATGACGGGGATGTGGGCAGCGTCTACTTCGGGCCCAACCATCCTATGAAGCCACACCGGCTTTGTATGACCCATCACCTTGTGCTCTCATATGATCTCCACAAGAAGATGGAAATTTATCGGCCCCACAAGGCATATCCGGTGGAGCTTGCGCAATTCCATTCCGCTGACTATGTCGAGTTTCTCCACCGGATTACCCCTGACAAGCAGCATTTGTTCTCCATTGAATTGGCAAGATATAATCTTGGAGAAGATTGCCCTGTATTCGATAACTTGTTTGAATTCTGTCAAATTTATGCTGGTGGCACAATAGATGCTGCACGTAGGTTGAACAATAAGCTCTGTGACATTGCTATAAACTGGGCTGGTGGACTACACCATGCAAAAAAGTGTGGGGCATCTGGATTCTGTTACATCAATGACTTGGTCTTGGGTATCTTGGAGCTTCTAAAACATCATGCCCGGGTATTATACATTGACATAGATGTGCATCATGGTGATGGAGTAGAGGAAGCTTTTTATTTTACTGATAGGGTAATGACTGTTAGTTTTCACAAGTTTGGGGATCTGTTTTTTCCAGGAACAGGTGATGTTAAGGAGAAAGGGGAAGGCAAATTTTATGCCATCAATGTTCCACTCAAGAATGGAATAGATGATACTAGCTTCACCAGACTTTTCAAGACTATTATTTCCAAGGTTATTGAAACTTATCAACCAGGTGCAATAGTTCTCCAATGTGGGGCAGATTCGCTTGCTGGAGACCGCCTGGGCTGCTTCAATCTCTCCATTGATGGTCATGCTGAATGTGTTAGGTTTGTGAAGAAGTTCAATATACCCTTACTGGTCACAGGAGGTGGTGGATACACAAAAGAGAATGTTGCTCGGTGTTGGACTGTTGAAACTGGAGTTCTTCTGGATTCAGATCTTCCCAATGTTAAAAGTGCCGTGCAATTGGAGAACCTAAATAGTAAATCATATCTCAGTACAATTAAAATGCAAGTCATGGAAAATCTTCGTTGCATCCAACATGCTCCTAGTGTACAATTGCAAGAGGTTCCACCAGATTTTTATATTCCAGATTTTGATGAAGATGAGCAGAACCCTGATGAACGTGTGCATCAGCATACCCAAGACAAGCACATTCAGCGTGATGACGAATATTATGATGGTGACAACGATAACGATCACAACGTGGAAGATGCACAGAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006325 GO:0006464 GO:0006476 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0010029 GO:0010187 GO:0016043 GO:0016569 GO:0016570 GO:0016575 GO:0019538 GO:0035601 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043565 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048519 GO:0048580 GO:0048581 GO:0048831 GO:0050789 GO:0050793 GO:0051093 GO:0051239 GO:0051241 GO:0051276 GO:0065007 GO:0070932 GO:0071704 GO:0071840 GO:0097159 GO:0098732 GO:1900055 GO:1900140 GO:1901363 GO:1901564 GO:1990619 GO:2000024 GO:2000026

KEGG Pathways

Metabolic & Signaling

ko04110 ko04213 ko04330 ko04919 ko05016 ko05034 ko05165 ko05169 ko05200 ko05202 ko05203 ko05220 map04110 map04213 map04330 map04919 map05016 map05034 map05165 map05169 map05200 map05202 map05203 map05220

Pfam Domains

Protein Families

Hist_deacetyl

Protein Analysis

478

Amino Acids

54.0

Weight (kDa)

5.75

Isoelectric Point (pI)

33.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Hist_deacetyl	PF00850	89 - 377	2.7e-84	Histone deacetylase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007853)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G44680
fragaria_vesca	FvH4_5g27310 FvH4_5g27310 FvH4_5g27310 FvH4_5g27310
malus_domestica	MD11G1159400.v1.1
prunus_persica	Prupe.6G122500_v2.0.a1 Prupe.6G122500_v2.0.a1 Prupe.6G122500_v2.0.a1 Prupe.6G122500_v2.0.a1 Prupe.6G122500_v2.0.a1 Prupe.6G122500_v2.0.a1
pyrus_communis	pycom03g09310 pycom11g13010
rosa_chinensis	RchiOBHm_Chr7g0218461
rosa_laevigata	RLG00000002371
rosa_multiflora	Rmu_sc0001301.1_g000083
rosa_roxburghii	Rroxscaffold_3G00240940
rosa_rugosa	Rorug07G0177300 Rorug07G0177300 Rorug07G0177300
rosa_samantha	Rh7AG318700 Rh7CG335700
rosa_wichuraiana	Rw7G027090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	39
Acc16I	TGCGCA	1 cut(s)	378
AccI	GTMKAC	1 cut(s)	249
AccII	CGCG	1 cut(s)	71
AciI	CCGC	5 cut(s)	69, 71, 74, 390, 988
AclWI	GGATC	2 cut(s)	26, 798
AcsI	RAATTY	5 cut(s)	121, 339, 506, 516, 839
AcyI	GRCGYC	1 cut(s)	36
AdeI	CACNNNGTG	2 cut(s)	307, 1417
AfaI	GTAC	2 cut(s)	1210, 1266
AfiI	CCNNNNNNNGG	2 cut(s)	809, 964
AflIII	ACRYGT	1 cut(s)	1336
AgsI	TTSAA	9 cut(s)	126, 452, 506, 556, 904, 929, 1003, 1054, 1124
AjnI	CCWGG	3 cut(s)	802, 940, 990
AluBI	AGCT	6 cut(s)	147, 373, 565, 670, 740, 888
AluI	AGCT	6 cut(s)	147, 373, 565, 670, 740, 888
Alw21I	GWGCWC	2 cut(s)	149, 312
Alw26I	GTCTC	1 cut(s)	978
AlwI	GGATC	2 cut(s)	26, 798
Ama87I	CYCGRG	1 cut(s)	687
AoxI	GGCC	3 cut(s)	66, 257, 347
ApaI	GGGCCC	1 cut(s)	261
ApeKI	GCWGC	4 cut(s)	243, 433, 542, 996
ApoI	RAATTY	5 cut(s)	121, 339, 506, 516, 839
Asp700I	GAANNNNTTC	2 cut(s)	1049, 1236
AspLEI	GCGC	2 cut(s)	201, 379
AspS9I	GGNCC	3 cut(s)	257, 258, 348
AsuC2I	CCSGG	3 cut(s)	157, 688, 689
AsuHPI	GGTGA	5 cut(s)	293, 734, 824, 883, 1406
AvaI	CYCGRG	1 cut(s)	687
BaeGI	GKGCMC	1 cut(s)	261
BanII	GRGCYC	2 cut(s)	149, 261
Bbv12I	GWGCWC	2 cut(s)	149, 312
BbvI	GCAGC	4 cut(s)	255, 445, 529, 983
BccI	CCATC	7 cut(s)	273, 306, 328, 719, 857, 1010, 1385
BceAI	ACGGC	3 cut(s)	64, 105, 1154
BciT130I	CCWGG	3 cut(s)	804, 942, 992
BciVI	GTATCC	1 cut(s)	1079
BcnI	CCSGG	3 cut(s)	157, 688, 689
BcoDI	GTCTC	1 cut(s)	978
BfaI	CTAG	2 cut(s)	885, 1260
BfuI	GTATCC	1 cut(s)	1079
BglI	GCCNNNNNGGC	2 cut(s)	74, 283
BglII	AGATCT	1 cut(s)	1147
BisI	GCNGC	7 cut(s)	69, 72, 75, 244, 434, 543, 997
BlsI	GCNGC	7 cut(s)	70, 73, 76, 245, 435, 544, 998
Bme1390I	CCNGG	6 cut(s)	157, 688, 689, 804, 942, 992
BmeT110I	CYCGRG	1 cut(s)	687
BmgT120I	GGNCC	3 cut(s)	257, 258, 348
BmiI	GGNNCC	3 cut(s)	259, 350, 1281
BmrFI	CCNGG	6 cut(s)	157, 688, 689, 804, 942, 992
BmrI	ACTGGG	1 cut(s)	595
BmsI	GCATC	7 cut(s)	94, 529, 632, 724, 1254, 1351, 1414
BmuI	ACTGGG	1 cut(s)	595
BpmI	CTGGAG	2 cut(s)	1002, 1149
BpuEI	CTTGAG	2 cut(s)	15, 848
BpuMI	CCSGG	3 cut(s)	157, 688, 689
BsaAI	YACGTR	1 cut(s)	548
BsaBI	GATNNNNATC	3 cut(s)	714, 1146, 1407
BsaHI	GRCGYC	1 cut(s)	36
BsaI	GGTCTC	1 cut(s)	978
BsaJI	CCNNGG	4 cut(s)	69, 687, 918, 991
BsaWI	WCCGGW	2 cut(s)	364, 414
BsaXI	ACNNNNNCTCC	2 cut(s)	200, 230
Bsc4I	CCNNNNNNNGG	2 cut(s)	809, 964
Bse118I	RCCGGY	1 cut(s)	282
Bse1I	ACTGG	3 cut(s)	590, 1071, 1132
Bse3DI	GCAATG	1 cut(s)	573
Bse8I	GATNNNNATC	3 cut(s)	714, 1146, 1407
BseBI	CCWGG	3 cut(s)	804, 942, 992
BseDI	CCNNGG	4 cut(s)	69, 687, 918, 991
BseGI	GGATG	3 cut(s)	241, 265, 1245
BseJI	GATNNNNATC	3 cut(s)	714, 1146, 1407
BseLI	CCNNNNNNNGG	2 cut(s)	809, 964
BseMI	GCAATG	1 cut(s)	573
BseMII	CTCAG	1 cut(s)	1219
BseNI	ACTGG	3 cut(s)	590, 1071, 1132
BseSI	GKGCMC	1 cut(s)	261
BseXI	GCAGC	4 cut(s)	255, 445, 529, 983
BsgI	GTGCAG	1 cut(s)	528
Bsh1236I	CGCG	1 cut(s)	71
BshFI	GGCC	3 cut(s)	68, 259, 349
BsiHKAI	GWGCWC	2 cut(s)	149, 312
BsiHKCI	CYCGRG	1 cut(s)	687
BsiSI	CCGG	5 cut(s)	157, 283, 365, 415, 688
BslI	CCNNNNNNNGG	2 cut(s)	809, 964
BsmAI	GTCTC	1 cut(s)	978
BsnI	GGCC	3 cut(s)	68, 259, 349
Bso31I	GGTCTC	1 cut(s)	978
BsoBI	CYCGRG	1 cut(s)	687
Bsp120I	GGGCCC	1 cut(s)	257
Bsp1286I	GDGCHC	3 cut(s)	149, 261, 312
Bsp1407I	TGTACA	1 cut(s)	1264
Bsp143I	GATC	6 cut(s)	18, 83, 319, 790, 1147, 1408
BspACI	CCGC	5 cut(s)	69, 71, 74, 390, 988
BspANI	GGCC	3 cut(s)	68, 259, 349
BspCNI	CTCAG	1 cut(s)	1218
BspFNI	CGCG	1 cut(s)	71
BspLI	GGNNCC	3 cut(s)	259, 350, 1281
BspPI	GGATC	2 cut(s)	26, 798
BspQI	GCTCTTC	1 cut(s)	175
BspTNI	GGTCTC	1 cut(s)	978
BsrDI	GCAATG	1 cut(s)	573
BsrFI	RCCGGY	1 cut(s)	282
BsrGI	TGTACA	1 cut(s)	1264
BsrI	ACTGG	3 cut(s)	590, 1071, 1132
BssAI	RCCGGY	1 cut(s)	282
BssECI	CCNNGG	4 cut(s)	69, 687, 918, 991
BssMI	GATC	6 cut(s)	18, 83, 319, 790, 1147, 1408
BssNI	GRCGYC	1 cut(s)	36
BssT1I	CCWWGG	1 cut(s)	918
Bst2UI	CCWGG	3 cut(s)	804, 942, 992
Bst4CI	ACNGT	2 cut(s)	769, 1120
Bst6I	CTCTTC	1 cut(s)	175
BstACI	GRCGYC	1 cut(s)	36
BstAUI	TGTACA	1 cut(s)	1264
BstBAI	YACGTR	1 cut(s)	548
BstC8I	GCNNGC	2 cut(s)	375, 978
BstDEI	CTNAG	1 cut(s)	1205
BstDSI	CCRYGG	1 cut(s)	69
BstF5I	GGATG	3 cut(s)	241, 265, 1245
BstFNI	CGCG	1 cut(s)	71
BstHHI	GCGC	2 cut(s)	201, 379
BstKTI	GATC	6 cut(s)	21, 86, 322, 793, 1150, 1411
BstMAI	GTCTC	1 cut(s)	978
BstMBI	GATC	6 cut(s)	18, 83, 319, 790, 1147, 1408
BstMWI	GCNNNNNNNGC	4 cut(s)	74, 283, 996, 1369
BstNI	CCWGG	3 cut(s)	804, 942, 992
BstNSI	RCATGY	1 cut(s)	1256
BstSCI	CCNGG	6 cut(s)	155, 686, 687, 802, 940, 990
BstSLI	GKGCMC	1 cut(s)	261
BstUI	CGCG	1 cut(s)	71
BstV1I	GCAGC	4 cut(s)	255, 445, 529, 983
BstX2I	RGATCY	2 cut(s)	790, 1147
BstXI	CCANNNNNNTGG	1 cut(s)	454
BstYI	RGATCY	2 cut(s)	790, 1147
BsuI	GTATCC	1 cut(s)	1079
BsuRI	GGCC	3 cut(s)	68, 259, 349
BtgI	CCRYGG	1 cut(s)	69
BtsCI	GGATG	3 cut(s)	241, 265, 1245
Cac8I	GCNNGC	2 cut(s)	375, 978
CfoI	GCGC	2 cut(s)	201, 379
Cfr10I	RCCGGY	1 cut(s)	282
Cfr13I	GGNCC	3 cut(s)	257, 258, 348
Cfr42I	CCGCGG	1 cut(s)	72
Cfr9I	CCCGGG	1 cut(s)	687
CseI	GACGC	1 cut(s)	235
CsiI	ACCWGGT	1 cut(s)	940
Csp6I	GTAC	2 cut(s)	1209, 1265
CviAII	CATG	7 cut(s)	10, 605, 683, 719, 1022, 1228, 1253
CviQI	GTAC	2 cut(s)	1209, 1265
DdeI	CTNAG	1 cut(s)	1205
DpnI	GATC	6 cut(s)	20, 85, 321, 792, 1149, 1410
DpnII	GATC	6 cut(s)	18, 83, 319, 790, 1147, 1408
DraIII	CACNNNGTG	2 cut(s)	307, 1417
Eam1104I	CTCTTC	1 cut(s)	175
EarI	CTCTTC	1 cut(s)	175
Ecl136II	GAGCTC	1 cut(s)	147
Eco130I	CCWWGG	1 cut(s)	918
Eco24I	GRGCYC	2 cut(s)	149, 261
Eco31I	GGTCTC	1 cut(s)	978
Eco53kI	GAGCTC	1 cut(s)	147
Eco88I	CYCGRG	1 cut(s)	687
EcoICRI	GAGCTC	1 cut(s)	147
EcoRI	GAATTC	1 cut(s)	506
EcoRII	CCWGG	3 cut(s)	802, 940, 990
EcoT14I	CCWWGG	1 cut(s)	918
EcoT38I	GRGCYC	2 cut(s)	149, 261
ErhI	CCWWGG	1 cut(s)	918
FaeI	CATG	7 cut(s)	13, 608, 686, 722, 1025, 1231, 1256
FatI	CATG	7 cut(s)	9, 604, 682, 718, 1021, 1227, 1252
FauNDI	CATATG	1 cut(s)	316
FblI	GTMKAC	1 cut(s)	249
Fnu4HI	GCNGC	7 cut(s)	69, 72, 75, 244, 434, 543, 997
FokI	GGATG	3 cut(s)	248, 252, 1232
FriOI	GRGCYC	2 cut(s)	149, 261
Fsp4HI	GCNGC	7 cut(s)	69, 72, 75, 244, 434, 543, 997
FspBI	CTAG	2 cut(s)	885, 1260
FspI	TGCGCA	1 cut(s)	378
GlaI	GCGC	2 cut(s)	200, 378
GluI	GCNGC	7 cut(s)	69, 72, 75, 244, 434, 543, 997
GsuI	CTGGAG	2 cut(s)	1002, 1149
HaeIII	GGCC	3 cut(s)	68, 259, 349
HapII	CCGG	5 cut(s)	157, 283, 365, 415, 688
HgaI	GACGC	1 cut(s)	235
HhaI	GCGC	2 cut(s)	201, 379
Hin1I	GRCGYC	1 cut(s)	36
Hin1II	CATG	7 cut(s)	13, 608, 686, 722, 1025, 1231, 1256
Hin6I	GCGC	2 cut(s)	199, 377
HinP1I	GCGC	2 cut(s)	199, 377
HindIII	AAGCTT	1 cut(s)	738
HinfI	GANTC	5 cut(s)	53, 213, 630, 971, 1142
HpaII	CCGG	5 cut(s)	157, 283, 365, 415, 688
HphI	GGTGA	5 cut(s)	293, 734, 824, 883, 1406
Hpy166II	GTNNAC	3 cut(s)	250, 596, 1265
Hpy188I	TCNGA	3 cut(s)	23, 151, 1147
Hpy188III	TCNNGA	6 cut(s)	32, 627, 865, 904, 1139, 1301
Hpy8I	GTNNAC	3 cut(s)	250, 596, 1265
Hpy99I	CGWCG	2 cut(s)	50, 91
HpyAV	CCTTC	1 cut(s)	827
HpyCH4III	ACNGT	2 cut(s)	769, 1120
HpyCH4IV	ACGT	4 cut(s)	36, 547, 1336, 1416
HpyF10VI	GCNNNNNNNGC	4 cut(s)	74, 283, 996, 1369
HpyF3I	CTNAG	1 cut(s)	1205
HpySE526I	ACGT	4 cut(s)	36, 547, 1336, 1416
Hsp92I	GRCGYC	1 cut(s)	36
Hsp92II	CATG	7 cut(s)	13, 608, 686, 722, 1025, 1231, 1256
HspAI	GCGC	2 cut(s)	199, 377
KspI	CCGCGG	1 cut(s)	72
Kzo9I	GATC	6 cut(s)	18, 83, 319, 790, 1147, 1408
LguI	GCTCTTC	1 cut(s)	175
LmnI	GCTCC	4 cut(s)	144, 370, 667, 1261
Lsp1109I	GCAGC	4 cut(s)	255, 445, 529, 983
LweI	GCATC	7 cut(s)	94, 529, 632, 724, 1254, 1351, 1414
MabI	ACCWGGT	1 cut(s)	940
MaeI	CTAG	2 cut(s)	885, 1260
MaeII	ACGT	4 cut(s)	36, 547, 1336, 1416
MaeIII	GTNAC	5 cut(s)	59, 569, 635, 1069, 1394
MalI	GATC	6 cut(s)	20, 85, 321, 792, 1149, 1410
MboI	GATC	6 cut(s)	18, 83, 319, 790, 1147, 1408
MboII	GAAGA	9 cut(s)	162, 343, 488, 1057, 1127, 1142, 1229, 1325, 1433
MfeI	CAATTG	2 cut(s)	1175, 1268
MflI	RGATCY	2 cut(s)	790, 1147
MhlI	GDGCHC	3 cut(s)	149, 261, 312
MmeI	TCCRAC	2 cut(s)	1094, 1273
MnlI	CCTC	4 cut(s)	58, 727, 1070, 1270
MroXI	GAANNNNTTC	2 cut(s)	1049, 1236
MseI	TTAA	5 cut(s)	110, 819, 1161, 1215, 1435
MslI	CAYNNNNRTG	4 cut(s)	102, 710, 720, 723
MspA1I	CMGCKG	2 cut(s)	71, 392
MspI	CCGG	5 cut(s)	157, 283, 365, 415, 688
MspR9I	CCNGG	6 cut(s)	157, 688, 689, 804, 942, 992
MunI	CAATTG	2 cut(s)	1175, 1268
MvaI	CCWGG	3 cut(s)	804, 942, 992
MvnI	CGCG	1 cut(s)	71
MwoI	GCNNNNNNNGC	4 cut(s)	74, 283, 996, 1369
NciI	CCSGG	3 cut(s)	157, 688, 689
NdeI	CATATG	1 cut(s)	316
NdeII	GATC	6 cut(s)	18, 83, 319, 790, 1147, 1408
NlaIII	CATG	7 cut(s)	13, 608, 686, 722, 1025, 1231, 1256
NlaIV	GGNNCC	3 cut(s)	259, 350, 1281
NmuCI	GTSAC	3 cut(s)	569, 1069, 1394
NsbI	TGCGCA	1 cut(s)	378
NspI	RCATGY	1 cut(s)	1256
PciSI	GCTCTTC	1 cut(s)	175
PcsI	WCGNNNNNNNCGW	3 cut(s)	42, 48, 1413
PdmI	GAANNNNTTC	2 cut(s)	1049, 1236
PfeI	GAWTC	5 cut(s)	53, 213, 630, 971, 1142
PflFI	GACNNNGTC	2 cut(s)	398, 650
PfoI	TCCNGGA	1 cut(s)	802
PkrI	GCNGC	7 cut(s)	70, 73, 76, 245, 435, 544, 998
Ppu21I	YACGTR	1 cut(s)	548
Psp124BI	GAGCTC	1 cut(s)	149
Psp6I	CCWGG	3 cut(s)	802, 940, 990
PspGI	CCWGG	3 cut(s)	802, 940, 990
PspN4I	GGNNCC	3 cut(s)	259, 350, 1281
PspOMI	GGGCCC	1 cut(s)	257
PspPI	GGNCC	3 cut(s)	257, 258, 348
PsuI	RGATCY	2 cut(s)	790, 1147
PsyI	GACNNNGTC	2 cut(s)	398, 650
RsaI	GTAC	2 cut(s)	1210, 1266
RsaNI	GTAC	2 cut(s)	1209, 1265
RseI	CAYNNNNRTG	4 cut(s)	102, 710, 720, 723
SacI	GAGCTC	1 cut(s)	149
SacII	CCGCGG	1 cut(s)	72
SapI	GCTCTTC	1 cut(s)	175
SaqAI	TTAA	5 cut(s)	110, 819, 1161, 1215, 1435
SatI	GCNGC	7 cut(s)	69, 72, 75, 244, 434, 543, 997
Sau3AI	GATC	6 cut(s)	18, 83, 319, 790, 1147, 1408
Sau96I	GGNCC	3 cut(s)	257, 258, 348
ScrFI	CCNGG	6 cut(s)	157, 688, 689, 804, 942, 992
SduI	GDGCHC	3 cut(s)	149, 261, 312
SexAI	ACCWGGT	1 cut(s)	940
SfaNI	GCATC	7 cut(s)	94, 529, 632, 724, 1254, 1351, 1414
Sfr303I	CCGCGG	1 cut(s)	72
SgrBI	CCGCGG	1 cut(s)	72
SmaI	CCCGGG	1 cut(s)	689
SmiMI	CAYNNNNRTG	4 cut(s)	102, 710, 720, 723
SmlI	CTYRAG	2 cut(s)	30, 863
SmoI	CTYRAG	2 cut(s)	30, 863
SsiI	CCGC	5 cut(s)	69, 71, 74, 390, 988
SspI	AATATT	1 cut(s)	1385
SspMI	CTAG	2 cut(s)	885, 1260
SstI	GAGCTC	1 cut(s)	149
StyD4I	CCNGG	6 cut(s)	155, 686, 687, 802, 940, 990
StyI	CCWWGG	1 cut(s)	918
TaaI	ACNGT	2 cut(s)	769, 1120
TaiI	ACGT	4 cut(s)	39, 550, 1339, 1419
TaqI	TCGA	3 cut(s)	86, 402, 492
TatI	WGTACW	2 cut(s)	1208, 1264
TauI	GCSGC	3 cut(s)	71, 74, 77
TfiI	GAWTC	5 cut(s)	53, 213, 630, 971, 1142
Tru1I	TTAA	5 cut(s)	110, 819, 1161, 1215, 1435
Tru9I	TTAA	5 cut(s)	110, 819, 1161, 1215, 1435
TseFI	GTSAC	3 cut(s)	569, 1069, 1394
TseI	GCWGC	4 cut(s)	243, 433, 542, 996
Tsp45I	GTSAC	3 cut(s)	569, 1069, 1394
TspDTI	ATGAA	4 cut(s)	17, 287, 1326, 1347
TspMI	CCCGGG	1 cut(s)	687
Tth111I	GACNNNGTC	2 cut(s)	398, 650
XapI	RAATTY	5 cut(s)	121, 339, 506, 516, 839
XceI	RCATGY	1 cut(s)	1256
XmaI	CCCGGG	1 cut(s)	687
XmiI	GTMKAC	1 cut(s)	249
XmnI	GAANNNNTTC	2 cut(s)	1049, 1236
XspI	CTAG	2 cut(s)	885, 1260
ZraI	GACGTC	1 cut(s)	37

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.