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| Species | Orthologous Gene IDs |
|---|---|
| rosa_roxburghii | Rroxscaffold_3G00253330 Rroxscaffold_3G00253350 Rroxscaffold_3G00266890 Rroxscaffold_4G00284580 Rroxscaffold_6G00412180 |
| rosa_samantha | Rh7AG210700 Rh7BG092500 Rh7CG092000 Rh7CG223100 Rh7CG223300 Rh7DG217400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 5 |
| AcoI | YGGCCR | 1 cut(s) | 164 |
| AcsI | RAATTY | 1 cut(s) | 64 |
| AcuI | CTGAAG | 1 cut(s) | 131 |
| AfeI | AGCGCT | 1 cut(s) | 100 |
| AgeI | ACCGGT | 1 cut(s) | 243 |
| AgsI | TTSAA | 3 cut(s) | 143, 158, 172 |
| AjnI | CCWGG | 1 cut(s) | 237 |
| Ama87I | CYCGRG | 1 cut(s) | 42 |
| Aor51HI | AGCGCT | 1 cut(s) | 100 |
| AoxI | GGCC | 1 cut(s) | 164 |
| ApoI | RAATTY | 1 cut(s) | 64 |
| AsiGI | ACCGGT | 1 cut(s) | 243 |
| AspLEI | GCGC | 1 cut(s) | 101 |
| AspS9I | GGNCC | 1 cut(s) | 241 |
| AsuHPI | GGTGA | 1 cut(s) | 200 |
| AvaI | CYCGRG | 1 cut(s) | 42 |
| AvaII | GGWCC | 1 cut(s) | 241 |
| BccI | CCATC | 2 cut(s) | 78, 185 |
| BciT130I | CCWGG | 1 cut(s) | 239 |
| BfoI | RGCGCY | 1 cut(s) | 102 |
| BisI | GCNGC | 1 cut(s) | 5 |
| BlsI | GCNGC | 1 cut(s) | 6 |
| Bme1390I | CCNGG | 1 cut(s) | 239 |
| Bme18I | GGWCC | 1 cut(s) | 241 |
| BmeT110I | CYCGRG | 1 cut(s) | 42 |
| BmgT120I | GGNCC | 1 cut(s) | 241 |
| BmrFI | CCNGG | 1 cut(s) | 239 |
| BmsI | GCATC | 1 cut(s) | 98 |
| BsaWI | WCCGGW | 1 cut(s) | 243 |
| Bse118I | RCCGGY | 1 cut(s) | 243 |
| Bse3DI | GCAATG | 1 cut(s) | 202 |
| BseBI | CCWGG | 1 cut(s) | 239 |
| BseGI | GGATG | 1 cut(s) | 70 |
| BseMI | GCAATG | 1 cut(s) | 202 |
| BseMII | CTCAG | 1 cut(s) | 44 |
| BshFI | GGCC | 1 cut(s) | 166 |
| BshTI | ACCGGT | 1 cut(s) | 243 |
| BsiHKCI | CYCGRG | 1 cut(s) | 42 |
| BsiSI | CCGG | 1 cut(s) | 244 |
| BslFI | GGGAC | 1 cut(s) | 104 |
| BsmFI | GGGAC | 1 cut(s) | 104 |
| BsmI | GAATGC | 1 cut(s) | 220 |
| BsnI | GGCC | 1 cut(s) | 166 |
| BsoBI | CYCGRG | 1 cut(s) | 42 |
| Bsp143I | GATC | 1 cut(s) | 160 |
| BspACI | CCGC | 1 cut(s) | 5 |
| BspANI | GGCC | 1 cut(s) | 166 |
| BspCNI | CTCAG | 1 cut(s) | 43 |
| BspHI | TCATGA | 1 cut(s) | 127 |
| BspQI | GCTCTTC | 1 cut(s) | 167 |
| BsrDI | GCAATG | 1 cut(s) | 202 |
| BsrFI | RCCGGY | 1 cut(s) | 243 |
| BssAI | RCCGGY | 1 cut(s) | 243 |
| BssMI | GATC | 1 cut(s) | 160 |
| Bst2UI | CCWGG | 1 cut(s) | 239 |
| Bst4CI | ACNGT | 1 cut(s) | 19 |
| Bst6I | CTCTTC | 1 cut(s) | 167 |
| BstC8I | GCNNGC | 2 cut(s) | 9, 97 |
| BstDEI | CTNAG | 1 cut(s) | 30 |
| BstF5I | GGATG | 1 cut(s) | 70 |
| BstH2I | RGCGCY | 1 cut(s) | 102 |
| BstHHI | GCGC | 1 cut(s) | 101 |
| BstKTI | GATC | 1 cut(s) | 163 |
| BstMBI | GATC | 1 cut(s) | 160 |
| BstNI | CCWGG | 1 cut(s) | 239 |
| BstSCI | CCNGG | 1 cut(s) | 237 |
| BsuRI | GGCC | 1 cut(s) | 166 |
| BtsCI | GGATG | 1 cut(s) | 70 |
| Cac8I | GCNNGC | 2 cut(s) | 9, 97 |
| CciI | TCATGA | 1 cut(s) | 127 |
| CfoI | GCGC | 1 cut(s) | 101 |
| Cfr10I | RCCGGY | 1 cut(s) | 243 |
| Cfr13I | GGNCC | 1 cut(s) | 241 |
| CspAI | ACCGGT | 1 cut(s) | 243 |
| CviAII | CATG | 1 cut(s) | 128 |
| CviJI | RGCY | 1 cut(s) | 166 |
| CviKI_1 | RGCY | 1 cut(s) | 166 |
| DdeI | CTNAG | 1 cut(s) | 30 |
| DpnI | GATC | 1 cut(s) | 162 |
| DpnII | GATC | 1 cut(s) | 160 |
| EaeI | YGGCCR | 1 cut(s) | 164 |
| Eam1104I | CTCTTC | 1 cut(s) | 167 |
| EarI | CTCTTC | 1 cut(s) | 167 |
| Eco47I | GGWCC | 1 cut(s) | 241 |
| Eco47III | AGCGCT | 1 cut(s) | 100 |
| Eco57I | CTGAAG | 1 cut(s) | 131 |
| Eco88I | CYCGRG | 1 cut(s) | 42 |
| EcoRII | CCWGG | 1 cut(s) | 237 |
| FaeI | CATG | 1 cut(s) | 131 |
| FaiI | YATR | 1 cut(s) | 129 |
| FaqI | GGGAC | 1 cut(s) | 104 |
| FatI | CATG | 1 cut(s) | 127 |
| Fnu4HI | GCNGC | 1 cut(s) | 5 |
| FokI | GGATG | 1 cut(s) | 57 |
| Fsp4HI | GCNGC | 1 cut(s) | 5 |
| GlaI | GCGC | 1 cut(s) | 100 |
| GluI | GCNGC | 1 cut(s) | 5 |
| HaeII | RGCGCY | 1 cut(s) | 102 |
| HaeIII | GGCC | 1 cut(s) | 166 |
| HapII | CCGG | 1 cut(s) | 244 |
| HhaI | GCGC | 1 cut(s) | 101 |
| Hin1II | CATG | 1 cut(s) | 131 |
| Hin6I | GCGC | 1 cut(s) | 99 |
| HinP1I | GCGC | 1 cut(s) | 99 |
| HpaII | CCGG | 1 cut(s) | 244 |
| HphI | GGTGA | 1 cut(s) | 200 |
| Hpy166II | GTNNAC | 1 cut(s) | 202 |
| Hpy188III | TCNNGA | 3 cut(s) | 32, 44, 128 |
| Hpy8I | GTNNAC | 1 cut(s) | 202 |
| HpyAV | CCTTC | 3 cut(s) | 93, 149, 223 |
| HpyCH4III | ACNGT | 1 cut(s) | 19 |
| HpyCH4V | TGCA | 4 cut(s) | 56, 78, 89, 218 |
| HpyF3I | CTNAG | 1 cut(s) | 30 |
| Hsp92II | CATG | 1 cut(s) | 131 |
| HspAI | GCGC | 1 cut(s) | 99 |
| Kzo9I | GATC | 1 cut(s) | 160 |
| LguI | GCTCTTC | 1 cut(s) | 167 |
| LpnPI | CCDG | 4 cut(s) | 17, 171, 206, 224 |
| LweI | GCATC | 1 cut(s) | 98 |
| MalI | GATC | 1 cut(s) | 162 |
| MboI | GATC | 1 cut(s) | 160 |
| MboII | GAAGA | 4 cut(s) | 59, 124, 170, 184 |
| MluCI | AATT | 2 cut(s) | 51, 64 |
| MnlI | CCTC | 1 cut(s) | 132 |
| MspI | CCGG | 1 cut(s) | 244 |
| MspR9I | CCNGG | 1 cut(s) | 239 |
| Mva1269I | GAATGC | 1 cut(s) | 220 |
| MvaI | CCWGG | 1 cut(s) | 239 |
| NdeII | GATC | 1 cut(s) | 160 |
| NlaIII | CATG | 1 cut(s) | 131 |
| PagI | TCATGA | 1 cut(s) | 127 |
| PciSI | GCTCTTC | 1 cut(s) | 167 |
| PctI | GAATGC | 1 cut(s) | 220 |
| PinAI | ACCGGT | 1 cut(s) | 243 |
| PkrI | GCNGC | 1 cut(s) | 6 |
| Psp6I | CCWGG | 1 cut(s) | 237 |
| PspGI | CCWGG | 1 cut(s) | 237 |
| PspPI | GGNCC | 1 cut(s) | 241 |
| SapI | GCTCTTC | 1 cut(s) | 167 |
| SatI | GCNGC | 1 cut(s) | 5 |
| Sau3AI | GATC | 1 cut(s) | 160 |
| Sau96I | GGNCC | 1 cut(s) | 241 |
| ScrFI | CCNGG | 1 cut(s) | 239 |
| SetI | ASST | 2 cut(s) | 85, 240 |
| SfaNI | GCATC | 1 cut(s) | 98 |
| SinI | GGWCC | 1 cut(s) | 241 |
| Sse9I | AATT | 2 cut(s) | 51, 64 |
| SsiI | CCGC | 1 cut(s) | 5 |
| StyD4I | CCNGG | 1 cut(s) | 237 |
| TaaI | ACNGT | 1 cut(s) | 19 |
| TasI | AATT | 2 cut(s) | 51, 64 |
| TauI | GCSGC | 1 cut(s) | 7 |
| VpaK11BI | GGWCC | 1 cut(s) | 241 |
| XapI | RAATTY | 1 cut(s) | 64 |