No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_roxburghii | Rroxscaffold_3G00253330 Rroxscaffold_3G00253350 Rroxscaffold_3G00266890 Rroxscaffold_4G00284580 Rroxscaffold_6G00412180 |
| rosa_samantha | Rh7AG210700 Rh7BG092500 Rh7CG092000 Rh7CG223100 Rh7CG223300 Rh7DG217400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 98 |
| AccII | CGCG | 1 cut(s) | 223 |
| AciI | CCGC | 1 cut(s) | 223 |
| AdeI | CACNNNGTG | 1 cut(s) | 64 |
| AgsI | TTSAA | 4 cut(s) | 50, 134, 149, 163 |
| AluBI | AGCT | 1 cut(s) | 26 |
| AluI | AGCT | 1 cut(s) | 26 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 87 |
| AsuHPI | GGTGA | 1 cut(s) | 191 |
| BccI | CCATC | 1 cut(s) | 181 |
| Bsa29I | ATCGAT | 1 cut(s) | 104 |
| Bse3DI | GCAATG | 1 cut(s) | 198 |
| BseCI | ATCGAT | 1 cut(s) | 104 |
| BseMI | GCAATG | 1 cut(s) | 198 |
| Bsh1236I | CGCG | 1 cut(s) | 223 |
| BshVI | ATCGAT | 1 cut(s) | 104 |
| BslFI | GGGAC | 1 cut(s) | 95 |
| BsmFI | GGGAC | 1 cut(s) | 95 |
| Bsp143I | GATC | 1 cut(s) | 101 |
| BspACI | CCGC | 1 cut(s) | 223 |
| BspDI | ATCGAT | 1 cut(s) | 104 |
| BspFNI | CGCG | 1 cut(s) | 223 |
| BspHI | TCATGA | 1 cut(s) | 118 |
| BsrDI | GCAATG | 1 cut(s) | 198 |
| BssMI | GATC | 1 cut(s) | 101 |
| BstFNI | CGCG | 1 cut(s) | 223 |
| BstKTI | GATC | 1 cut(s) | 104 |
| BstMBI | GATC | 1 cut(s) | 101 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 220 |
| BstUI | CGCG | 1 cut(s) | 223 |
| Bsu15I | ATCGAT | 1 cut(s) | 104 |
| BsuTUI | ATCGAT | 1 cut(s) | 104 |
| CciI | TCATGA | 1 cut(s) | 118 |
| ClaI | ATCGAT | 1 cut(s) | 104 |
| CviAII | CATG | 1 cut(s) | 119 |
| CviJI | RGCY | 3 cut(s) | 26, 54, 68 |
| CviKI_1 | RGCY | 3 cut(s) | 26, 54, 68 |
| DpnI | GATC | 1 cut(s) | 103 |
| DpnII | GATC | 1 cut(s) | 101 |
| DraIII | CACNNNGTG | 1 cut(s) | 64 |
| FaeI | CATG | 1 cut(s) | 122 |
| FaiI | YATR | 3 cut(s) | 75, 98, 120 |
| FaqI | GGGAC | 1 cut(s) | 95 |
| FatI | CATG | 1 cut(s) | 118 |
| Hin1II | CATG | 1 cut(s) | 122 |
| HindIII | AAGCTT | 1 cut(s) | 24 |
| HphI | GGTGA | 1 cut(s) | 191 |
| Hpy166II | GTNNAC | 1 cut(s) | 198 |
| Hpy188III | TCNNGA | 3 cut(s) | 9, 80, 119 |
| Hpy8I | GTNNAC | 1 cut(s) | 198 |
| HpyAV | CCTTC | 2 cut(s) | 140, 157 |
| HpyCH4V | TGCA | 1 cut(s) | 214 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 220 |
| Hsp92II | CATG | 1 cut(s) | 122 |
| Kzo9I | GATC | 1 cut(s) | 101 |
| LpnPI | CCDG | 2 cut(s) | 162, 202 |
| MalI | GATC | 1 cut(s) | 103 |
| MboI | GATC | 1 cut(s) | 101 |
| MboII | GAAGA | 1 cut(s) | 161 |
| MfeI | CAATTG | 1 cut(s) | 158 |
| MluCI | AATT | 2 cut(s) | 93, 158 |
| MroXI | GAANNNNTTC | 1 cut(s) | 87 |
| MunI | CAATTG | 1 cut(s) | 158 |
| MvnI | CGCG | 1 cut(s) | 223 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 220 |
| NdeII | GATC | 1 cut(s) | 101 |
| NlaIII | CATG | 1 cut(s) | 122 |
| PagI | TCATGA | 1 cut(s) | 118 |
| PdmI | GAANNNNTTC | 1 cut(s) | 87 |
| PsiI | TTATAA | 1 cut(s) | 98 |
| Sau3AI | GATC | 1 cut(s) | 101 |
| SetI | ASST | 1 cut(s) | 28 |
| SgeI | CNNG | 7 cut(s) | 21, 62, 73, 92, 131, 189, 216 |
| Sse9I | AATT | 2 cut(s) | 93, 158 |
| SsiI | CCGC | 1 cut(s) | 223 |
| TaqI | TCGA | 2 cut(s) | 81, 104 |
| TasI | AATT | 2 cut(s) | 93, 158 |
| XmnI | GAANNNNTTC | 1 cut(s) | 87 |