Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0014740

Physical Location & Seq

Genomic Coordinates Forward (+)

63286464 .. 63290178

Gene Structure 3715 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00270780.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1971 bp

ATGGAGGCACAACCATCTTTGCTATCACCCTCATCTTCATCATCTTGCAGTACTGATGATAACATTATGCCGCTTTCTTTCTCTCCGGTTTGGACTGAATCCTATAAAACAGAACCACTGCAAGCTGTGAACCAGGAGAAGGCATCCACTCCCAGGTCAGATACTGAATTGCTGAGATTTATGGACCTCACGGCCAATGGTGGGATGAGGTGGGAGGATGTAGAGGACCGGTTTGACCGGCTTGCCATCACACATTGCCAAATTGATCCAGTTATAAAATGGTCTGATTTTGGTTTGTGCATAGGGATGAAACAGTCGCAAGAGTTTGCTAATCAGCTATTAAGGGCTCTAAGGAAAAGCAAGGATTGCAATTTTTGTATAAGAAAAGCTGAACTGCACAGTTACTGGTGTCGTATGACTGACCCTTGCTTCAATTCAAGGATGCAGATTTTCTTTGACTTGTGTGACAGAAACATGGAAGGAAGAATGACTGAGATAGATATTAAGCAGACTATTATACTAAGTGCTACTACAAATAAGTTATTTTTGACACCTGAGGAAGCAGAAGACTATGCTGCTTTAGTCATGGAGCTGCTTGACACTGAAAAAAGAGGCTACATTGAGCTTCCCCAATTTGAGACTCTTTTTAAAGTGAGCTTATCAAAGGCCTCCTTCTCAAATAACCACTTGTCAATCAGACATGATCCGTATCACAATTTTGACCGAGTTCAGGAGCCAAATTCCAGGATAGAAATTTTGTTTCGATCTTATTGGCGACGAGCATGGATAGTTTTGTTGTGGTTGACCATATGTAGTGCACTGTTCACTTGGAAATTTCTGCAATATAGGCATAGAGCAGCTTTTCAAGTAATGGGGTACTGCCTATCCTCTGCCAAAGGTGCTGCTGAAACCCTTAAATTCAACATGGCTCTAATTCTCCTCCCTGTATGTCGTAATACAATTACATGGCTCCGAAGGAATCGTTCAGTCAACTCGATCATTCCATTCAATGACACTATCAACTTCCACAAGCTCATCGCAGGAGGGATAGTAGTAGCAGTTATCCTACATGGTGGTTGTCACCTAGCCTGTGATTTACCAAGAATTAGTGATTCAGATCAGGTAGTCTTCAGGCAAACAATAGCTGCCCAATTCGGATACCATCAACCATCATACTTTGAAATATTGTCCACAAAGGAAGTGGCATCAGGGATTGGTATGGTAATACTAATGGCCATAGCATTCTCACTTGCAACAACATGGCCACGCCGGGGGTCACCTTCACTGCCTAAGTCTGTCCGGAATGTCACAGGATACAATACCTTTTGGTACTCACACCACTTGTTCATACCTGCAAGTATTCATCCTGGAAAAGTTGTGTCCCTCAAATTGCACAAACCAGAAGGTTTCAAGTACCTGAGTGGCATGCACCCGTTTTCGTTAACATCAGGACCAGAAGATGACTACCTAAGTGTGCATATTAGAACTTCTGGGGACTGGAGTTACCAAATATACAGTCTTTTCCAAGAGGCAACATTATCTGGACTTAACAGTTACCCCAAAGTACACATTGATGGGCCTTATGGTGCTGCTTCCCAAGACCATATCAAGTATGATATCATTGTTCTAATCGGTCTAGGCATAGGCGCTACACCTTTCATTGGCATCCTCAAAGATATTGTCAATGGTGCTCAAAACTCATCACATTGTGATCATCATTCTGTTGTAGAGATGCACAATTTCTTAACTTCTGTGTATCAAGAGGGAGATGCGCGCTCAGTTCTAATAAGTGCAATACAAGCATTGCATTATGCCAAAAATGGGATTGACTTTGTTTCCCGGACTCCGGTAAGAACACATTTTGCCCGGCCAAACTGGTCCAGCATCTTCTCAAAATTGGCATGTAAACACAGAAGAGCACGGATTGGTGAGAGAAACTCGGAAAAGCAGAAAGAAATTTATGTCGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000160 GO:0001101 GO:0002252 GO:0002376 GO:0002679 GO:0003674 GO:0003824 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0006970 GO:0007154 GO:0007165 GO:0007231 GO:0008150 GO:0008152 GO:0009058 GO:0009628 GO:0009719 GO:0009723 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009873 GO:0009987 GO:0010033 GO:0010119 GO:0010941 GO:0016020 GO:0016174 GO:0016491 GO:0016651 GO:0016999 GO:0017000 GO:0017144 GO:0023052 GO:0032870 GO:0033036 GO:0033037 GO:0033500 GO:0033554 GO:0033993 GO:0035556 GO:0042221 GO:0042592 GO:0042743 GO:0043067 GO:0043069 GO:0044237 GO:0044249 GO:0044464 GO:0045730 GO:0048519 GO:0048523 GO:0048878 GO:0050664 GO:0050665 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051186 GO:0051188 GO:0051716 GO:0052542 GO:0052545 GO:0055114 GO:0060548 GO:0065007 GO:0065008 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071310 GO:0071369 GO:0071396 GO:0071470 GO:0071495 GO:0071944 GO:0072593 GO:0097305 GO:0097306 GO:0104004 GO:1901700 GO:1901701 GO:1903409

KEGG Pathways

Metabolic & Signaling

ko04016 ko04626 map04016 map04626

Pfam Domains

Protein Families

FAD_binding_8 Ferric_reduct NADPH_Ox NAD_binding_6

Protein Analysis

656

Amino Acids

74.63

Weight (kDa)

8.38

Isoelectric Point (pI)

48.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NADPH_Ox	PF08414	57 - 146	2.2e-19	Respiratory burst NADPH oxidase
Ferric_reduct	PF01794	309 - 453	7.7e-09	Ferric reductase like transmembrane component
FAD_binding_8	PF08022	456 - 532	1.5e-12	FAD-binding domain
NAD_binding_6	PF08030	573 - 643	3.3e-11	Ferric reductase NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0014740)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g13850 FvH4_5g13850 FvH4_5g13850
malus_domestica	MD14G1211700.v1.1
prunus_persica	Prupe.5G204900_v2.0.a1 Prupe.5G204900_v2.0.a1
pyrus_communis	pycom14g17530
rosa_chinensis	RchiOBHm_Chr7g0183081
rosa_laevigata	RLG00000005080
rosa_multiflora	Rmu_ssc0000111.1_g000005
rosa_roxburghii	Rroxscaffold_3G00270780
rosa_rugosa	Rorug06G0452600
rosa_samantha	Rh7AG055900 Rh7BG055200 Rh7CG056700 Rh7DG055400
rosa_wichuraiana	Rw7G004550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	275
Acc36I	ACCTGC	1 cut(s)	1360
AccII	CGCG	1 cut(s)	1774
AccIII	TCCGGA	1 cut(s)	1299
AciI	CCGC	1 cut(s)	71
AclWI	GGATC	2 cut(s)	260, 698
AcoI	YGGCCR	4 cut(s)	192, 1233, 1262, 1868
AcsI	RAATTY	5 cut(s)	739, 753, 833, 917, 1956
AcuI	CTGAAG	1 cut(s)	1114
AdeI	CACNNNGTG	1 cut(s)	1709
AfaI	GTAC	5 cut(s)	52, 878, 1331, 1415, 1566
AfiI	CCNNNNNNNGG	8 cut(s)	139, 153, 201, 730, 1271, 1661, 1821, 1846
AgeI	ACCGGT	1 cut(s)	228
AgsI	TTSAA	7 cut(s)	433, 438, 866, 922, 1009, 1181, 1411
AjnI	CCWGG	4 cut(s)	132, 152, 743, 1366
AluBI	AGCT	9 cut(s)	125, 337, 389, 592, 625, 657, 860, 1033, 1145
AluI	AGCT	9 cut(s)	125, 337, 389, 592, 625, 657, 860, 1033, 1145
Alw21I	GWGCWC	3 cut(s)	820, 1693, 1921
Alw26I	GTCTC	1 cut(s)	632
Alw44I	GTGCAC	1 cut(s)	816
AlwI	GGATC	2 cut(s)	260, 698
AlwNI	CAGNNNCTG	2 cut(s)	164, 405
Aor13HI	TCCGGA	1 cut(s)	1299
AoxI	GGCC	6 cut(s)	192, 666, 1233, 1262, 1577, 1868
ApaLI	GTGCAC	1 cut(s)	816
ApeKI	GCWGC	6 cut(s)	575, 592, 857, 902, 1145, 1589
ApoI	RAATTY	5 cut(s)	739, 753, 833, 917, 1956
ArsI	GACNNNNNNTTYG	4 cut(s)	1501, 1533, 1665, 1697
AsiGI	ACCGGT	1 cut(s)	228
AspLEI	GCGC	3 cut(s)	1649, 1774, 1776
AspS9I	GGNCC	5 cut(s)	184, 226, 1451, 1577, 1878
AsuC2I	CCSGG	3 cut(s)	1271, 1840, 1867
AsuHPI	GGTGA	4 cut(s)	18, 1073, 1269, 1940
AvaII	GGWCC	4 cut(s)	184, 226, 1451, 1878
AxyI	CCTNAGG	1 cut(s)	555
BaeGI	GKGCMC	1 cut(s)	820
BalI	TGGCCA	2 cut(s)	1235, 1264
BanII	GRGCYC	1 cut(s)	349
BbsI	GAAGAC	2 cut(s)	573, 1120
Bbv12I	GWGCWC	3 cut(s)	820, 1693, 1921
BbvI	GCAGC	6 cut(s)	562, 579, 869, 889, 1132, 1576
BccI	CCATC	5 cut(s)	22, 254, 1170, 1177, 1568
BceAI	ACGGC	1 cut(s)	207
BciT130I	CCWGG	4 cut(s)	134, 154, 745, 1368
BciVI	GTATCC	2 cut(s)	1151, 1307
BclI	TGATCA	1 cut(s)	1711
BcnI	CCSGG	3 cut(s)	1271, 1840, 1867
BcoDI	GTCTC	1 cut(s)	632
BfaI	CTAG	2 cut(s)	1085, 1637
BfoI	RGCGCY	1 cut(s)	1650
BfuAI	ACCTGC	1 cut(s)	1360
BfuI	GTATCC	2 cut(s)	1151, 1307
BisI	GCNGC	7 cut(s)	71, 576, 593, 858, 903, 1146, 1590
BlsI	GCNGC	7 cut(s)	72, 577, 594, 859, 904, 1147, 1591
BmcAI	AGTACT	1 cut(s)	52
Bme1390I	CCNGG	7 cut(s)	134, 154, 745, 1271, 1368, 1840, 1867
Bme18I	GGWCC	4 cut(s)	184, 226, 1451, 1878
BmgT120I	GGNCC	5 cut(s)	184, 226, 1451, 1577, 1878
BmiI	GGNNCC	2 cut(s)	735, 971
BmrFI	CCNGG	7 cut(s)	134, 154, 745, 1271, 1368, 1840, 1867
BmsI	GCATC	7 cut(s)	152, 432, 1214, 1674, 1722, 1759, 1893
BpiI	GAAGAC	2 cut(s)	573, 1120
BplI	GAGNNNNNCTC	2 cut(s)	1922, 1954
BpmI	CTGGAG	1 cut(s)	1519
BpuMI	CCSGG	3 cut(s)	1271, 1840, 1867
BsaBI	GATNNNNATC	2 cut(s)	708, 1116
BsaJI	CCNNGG	2 cut(s)	152, 1270
BsaWI	WCCGGW	4 cut(s)	85, 228, 1299, 1846
BsaXI	ACNNNNNCTCC	2 cut(s)	1035, 1065
Bsc4I	CCNNNNNNNGG	8 cut(s)	139, 153, 201, 730, 1271, 1661, 1821, 1846
Bse118I	RCCGGY	2 cut(s)	228, 237
Bse1I	ACTGG	4 cut(s)	269, 410, 1502, 1880
Bse21I	CCTNAGG	1 cut(s)	555
Bse3DI	GCAATG	2 cut(s)	253, 1802
Bse8I	GATNNNNATC	2 cut(s)	708, 1116
BseAI	TCCGGA	1 cut(s)	1299
BseBI	CCWGG	4 cut(s)	134, 154, 745, 1368
BseDI	CCNNGG	2 cut(s)	152, 1270
BseGI	GGATG	7 cut(s)	143, 210, 223, 312, 447, 1363, 1665
BseJI	GATNNNNATC	2 cut(s)	708, 1116
BseLI	CCNNNNNNNGG	8 cut(s)	139, 153, 201, 730, 1271, 1661, 1821, 1846
BseMI	GCAATG	2 cut(s)	253, 1802
BseMII	CTCAG	5 cut(s)	164, 483, 546, 1409, 1791
BseNI	ACTGG	4 cut(s)	269, 410, 1502, 1880
BsePI	GCGCGC	1 cut(s)	1772
BseRI	GAGGAG	1 cut(s)	929
BseSI	GKGCMC	1 cut(s)	820
BseXI	GCAGC	6 cut(s)	562, 579, 869, 889, 1132, 1576
BsgI	GTGCAG	1 cut(s)	380
Bsh1236I	CGCG	1 cut(s)	1774
BshFI	GGCC	6 cut(s)	194, 668, 1235, 1264, 1579, 1870
BshTI	ACCGGT	1 cut(s)	228
BsiHKAI	GWGCWC	3 cut(s)	820, 1693, 1921
BsiSI	CCGG	8 cut(s)	86, 229, 238, 1270, 1300, 1840, 1847, 1867
BslFI	GGGAC	2 cut(s)	1366, 1508
BslI	CCNNNNNNNGG	8 cut(s)	139, 153, 201, 730, 1271, 1661, 1821, 1846
BsmAI	GTCTC	1 cut(s)	632
BsmFI	GGGAC	2 cut(s)	1366, 1508
BsmI	GAATGC	1 cut(s)	1241
BsnI	GGCC	6 cut(s)	194, 668, 1235, 1264, 1579, 1870
Bsp1286I	GDGCHC	4 cut(s)	349, 820, 1693, 1921
Bsp13I	TCCGGA	1 cut(s)	1299
Bsp143I	GATC	6 cut(s)	265, 703, 764, 996, 1117, 1711
BspACI	CCGC	1 cut(s)	71
BspANI	GGCC	6 cut(s)	194, 668, 1235, 1264, 1579, 1870
BspCNI	CTCAG	5 cut(s)	165, 484, 547, 1410, 1790
BspEI	TCCGGA	1 cut(s)	1299
BspFNI	CGCG	1 cut(s)	1774
BspLI	GGNNCC	2 cut(s)	735, 971
BspMI	ACCTGC	1 cut(s)	1360
BspPI	GGATC	2 cut(s)	260, 698
BspQI	GCTCTTC	1 cut(s)	1909
BsrDI	GCAATG	2 cut(s)	253, 1802
BsrFI	RCCGGY	2 cut(s)	228, 237
BsrI	ACTGG	4 cut(s)	269, 410, 1502, 1880
BssAI	RCCGGY	2 cut(s)	228, 237
BssECI	CCNNGG	2 cut(s)	152, 1270
BssHII	GCGCGC	1 cut(s)	1772
BssMI	GATC	6 cut(s)	265, 703, 764, 996, 1117, 1711
Bst2UI	CCWGG	4 cut(s)	134, 154, 745, 1368
Bst4CI	ACNGT	5 cut(s)	315, 401, 822, 1517, 1553
Bst6I	CTCTTC	1 cut(s)	1909
BstAPI	GCANNNNNTGC	1 cut(s)	366
BstC8I	GCNNGC	4 cut(s)	123, 243, 1427, 1774
BstDEI	CTNAG	9 cut(s)	173, 350, 492, 521, 555, 1290, 1418, 1469, 1777
BstEII	GGTNACC	1 cut(s)	1275
BstF5I	GGATG	7 cut(s)	143, 210, 223, 312, 447, 1363, 1665
BstFNI	CGCG	1 cut(s)	1774
BstH2I	RGCGCY	1 cut(s)	1650
BstHHI	GCGC	3 cut(s)	1649, 1774, 1776
BstKTI	GATC	6 cut(s)	268, 706, 767, 999, 1120, 1714
BstMAI	GTCTC	1 cut(s)	632
BstMBI	GATC	6 cut(s)	265, 703, 764, 996, 1117, 1711
BstMWI	GCNNNNNNNGC	4 cut(s)	366, 847, 899, 1799
BstNI	CCWGG	4 cut(s)	134, 154, 745, 1368
BstNSI	RCATGY	2 cut(s)	1429, 1905
BstPI	GGTNACC	1 cut(s)	1275
BstSCI	CCNGG	7 cut(s)	132, 152, 743, 1269, 1366, 1838, 1865
BstSLI	GKGCMC	1 cut(s)	820
BstUI	CGCG	1 cut(s)	1774
BstV1I	GCAGC	6 cut(s)	562, 579, 869, 889, 1132, 1576
BstV2I	GAAGAC	2 cut(s)	573, 1120
Bsu36I	CCTNAGG	1 cut(s)	555
BsuI	GTATCC	2 cut(s)	1151, 1307
BsuRI	GGCC	6 cut(s)	194, 668, 1235, 1264, 1579, 1870
BtgZI	GCGATG	1 cut(s)	1021
BtsCI	GGATG	7 cut(s)	143, 210, 223, 312, 447, 1363, 1665
BtsI	GCAGTG	2 cut(s)	116, 1283
BtsIMutI	CAGTG	4 cut(s)	116, 600, 818, 1283
BveI	ACCTGC	1 cut(s)	1360
Cac8I	GCNNGC	4 cut(s)	123, 243, 1427, 1774
CaiI	CAGNNNCTG	2 cut(s)	164, 405
CfoI	GCGC	3 cut(s)	1649, 1774, 1776
Cfr10I	RCCGGY	2 cut(s)	228, 237
Cfr13I	GGNCC	5 cut(s)	184, 226, 1451, 1577, 1878
Csp6I	GTAC	5 cut(s)	51, 877, 1330, 1414, 1565
CspAI	ACCGGT	1 cut(s)	228
CspCI	CAANNNNNGTGG	2 cut(s)	1182, 1217
CviQI	GTAC	5 cut(s)	51, 877, 1330, 1414, 1565
DdeI	CTNAG	9 cut(s)	173, 350, 492, 521, 555, 1290, 1418, 1469, 1777
DpnI	GATC	6 cut(s)	267, 705, 766, 998, 1119, 1713
DpnII	GATC	6 cut(s)	265, 703, 764, 996, 1117, 1711
DraI	TTTAAA	1 cut(s)	649
DraIII	CACNNNGTG	1 cut(s)	1709
EaeI	YGGCCR	4 cut(s)	192, 1233, 1262, 1868
Eam1104I	CTCTTC	1 cut(s)	1909
EarI	CTCTTC	1 cut(s)	1909
Eco147I	AGGCCT	1 cut(s)	668
Eco24I	GRGCYC	1 cut(s)	349
Eco32I	GATATC	1 cut(s)	1618
Eco47I	GGWCC	4 cut(s)	184, 226, 1451, 1878
Eco57I	CTGAAG	1 cut(s)	1114
Eco81I	CCTNAGG	1 cut(s)	555
Eco91I	GGTNACC	1 cut(s)	1275
EcoO65I	GGTNACC	1 cut(s)	1275
EcoRII	CCWGG	4 cut(s)	132, 152, 743, 1366
EcoRV	GATATC	1 cut(s)	1618
EcoT38I	GRGCYC	1 cut(s)	349
FalI	AAGNNNNNCTT	2 cut(s)	656, 688
FaqI	GGGAC	2 cut(s)	1366, 1508
FauNDI	CATATG	1 cut(s)	809
FbaI	TGATCA	1 cut(s)	1711
Fnu4HI	GCNGC	7 cut(s)	71, 576, 593, 858, 903, 1146, 1590
FokI	GGATG	7 cut(s)	130, 217, 230, 319, 454, 1350, 1652
FriOI	GRGCYC	1 cut(s)	349
Fsp4HI	GCNGC	7 cut(s)	71, 576, 593, 858, 903, 1146, 1590
FspBI	CTAG	2 cut(s)	1085, 1637
GlaI	GCGC	3 cut(s)	1648, 1773, 1775
GluI	GCNGC	7 cut(s)	71, 576, 593, 858, 903, 1146, 1590
GsuI	CTGGAG	1 cut(s)	1519
HaeII	RGCGCY	1 cut(s)	1650
HaeIII	GGCC	6 cut(s)	194, 668, 1235, 1264, 1579, 1870
HapII	CCGG	8 cut(s)	86, 229, 238, 1270, 1300, 1840, 1847, 1867
HhaI	GCGC	3 cut(s)	1649, 1774, 1776
Hin6I	GCGC	3 cut(s)	1647, 1772, 1774
HinP1I	GCGC	3 cut(s)	1647, 1772, 1774
HincII	GTYRAC	3 cut(s)	804, 991, 1443
HindII	GTYRAC	3 cut(s)	804, 991, 1443
HinfI	GANTC	5 cut(s)	98, 640, 979, 1112, 1843
HpaI	GTTAAC	1 cut(s)	1443
HpaII	CCGG	8 cut(s)	86, 229, 238, 1270, 1300, 1840, 1847, 1867
HphI	GGTGA	4 cut(s)	18, 1073, 1269, 1940
Hpy166II	GTNNAC	9 cut(s)	130, 804, 818, 825, 991, 1191, 1443, 1567, 1907
Hpy188I	TCNGA	7 cut(s)	160, 286, 698, 974, 1117, 1157, 1942
Hpy188III	TCNNGA	5 cut(s)	731, 1300, 1449, 1542, 1760
Hpy8I	GTNNAC	9 cut(s)	130, 804, 818, 825, 991, 1191, 1443, 1567, 1907
Hpy99I	CGWCG	1 cut(s)	780
HpyAV	CCTTC	6 cut(s)	133, 473, 682, 969, 1290, 1397
HpyCH4III	ACNGT	5 cut(s)	315, 401, 822, 1517, 1553
HpyF10VI	GCNNNNNNNGC	4 cut(s)	366, 847, 899, 1799
HpyF3I	CTNAG	9 cut(s)	173, 350, 492, 521, 555, 1290, 1418, 1469, 1777
HspAI	GCGC	3 cut(s)	1647, 1772, 1774
Kpn2I	TCCGGA	1 cut(s)	1299
Ksp22I	TGATCA	1 cut(s)	1711
KspAI	GTTAAC	1 cut(s)	1443
Kzo9I	GATC	6 cut(s)	265, 703, 764, 996, 1117, 1711
LguI	GCTCTTC	1 cut(s)	1909
LmnI	GCTCC	3 cut(s)	589, 733, 975
Lsp1109I	GCAGC	6 cut(s)	562, 579, 869, 889, 1132, 1576
LweI	GCATC	7 cut(s)	152, 432, 1214, 1674, 1722, 1759, 1893
MaeI	CTAG	2 cut(s)	1085, 1637
MaeIII	GTNAC	7 cut(s)	401, 464, 1079, 1275, 1306, 1502, 1553
MalI	GATC	6 cut(s)	267, 705, 766, 998, 1119, 1713
MboI	GATC	6 cut(s)	265, 703, 764, 996, 1117, 1711
MboII	GAAGA	7 cut(s)	27, 495, 578, 1120, 1469, 1879, 1926
MhlI	GDGCHC	4 cut(s)	349, 820, 1693, 1921
MlsI	TGGCCA	2 cut(s)	1235, 1264
MluNI	TGGCCA	2 cut(s)	1235, 1264
MlyI	GAGTC	2 cut(s)	634, 1837
Mox20I	TGGCCA	2 cut(s)	1235, 1264
MroI	TCCGGA	1 cut(s)	1299
MscI	TGGCCA	2 cut(s)	1235, 1264
MseI	TTAA	7 cut(s)	341, 504, 648, 915, 1442, 1548, 1745
MslI	CAYNNNNRTG	2 cut(s)	305, 1572
Msp20I	TGGCCA	2 cut(s)	1235, 1264
MspI	CCGG	8 cut(s)	86, 229, 238, 1270, 1300, 1840, 1847, 1867
MspR9I	CCNGG	7 cut(s)	134, 154, 745, 1271, 1368, 1840, 1867
Mva1269I	GAATGC	1 cut(s)	1241
MvaI	CCWGG	4 cut(s)	134, 154, 745, 1368
MvnI	CGCG	1 cut(s)	1774
MwoI	GCNNNNNNNGC	4 cut(s)	366, 847, 899, 1799
NciI	CCSGG	3 cut(s)	1271, 1840, 1867
NdeI	CATATG	1 cut(s)	809
NdeII	GATC	6 cut(s)	265, 703, 764, 996, 1117, 1711
NlaIV	GGNNCC	2 cut(s)	735, 971
NmuCI	GTSAC	4 cut(s)	464, 1079, 1275, 1306
NspI	RCATGY	2 cut(s)	1429, 1905
PaeI	GCATGC	1 cut(s)	1429
PauI	GCGCGC	1 cut(s)	1772
PceI	AGGCCT	1 cut(s)	668
PciSI	GCTCTTC	1 cut(s)	1909
PctI	GAATGC	1 cut(s)	1241
PfeI	GAWTC	3 cut(s)	98, 979, 1112
PfoI	TCCNGGA	3 cut(s)	743, 1366, 1838
PinAI	ACCGGT	1 cut(s)	228
PkrI	GCNGC	7 cut(s)	72, 577, 594, 859, 904, 1147, 1591
PleI	GAGTC	2 cut(s)	634, 1837
PpsI	GAGTC	2 cut(s)	634, 1837
PsiI	TTATAA	1 cut(s)	275
Psp6I	CCWGG	4 cut(s)	132, 152, 743, 1366
PspEI	GGTNACC	1 cut(s)	1275
PspGI	CCWGG	4 cut(s)	132, 152, 743, 1366
PspN4I	GGNNCC	2 cut(s)	735, 971
PspPI	GGNCC	5 cut(s)	184, 226, 1451, 1577, 1878
PstNI	CAGNNNCTG	2 cut(s)	164, 405
PteI	GCGCGC	1 cut(s)	1772
RsaI	GTAC	5 cut(s)	52, 878, 1331, 1415, 1566
RsaNI	GTAC	5 cut(s)	51, 877, 1330, 1414, 1565
RseI	CAYNNNNRTG	2 cut(s)	305, 1572
SapI	GCTCTTC	1 cut(s)	1909
SaqAI	TTAA	7 cut(s)	341, 504, 648, 915, 1442, 1548, 1745
SatI	GCNGC	7 cut(s)	71, 576, 593, 858, 903, 1146, 1590
Sau3AI	GATC	6 cut(s)	265, 703, 764, 996, 1117, 1711
Sau96I	GGNCC	5 cut(s)	184, 226, 1451, 1577, 1878
ScaI	AGTACT	1 cut(s)	52
SchI	GAGTC	2 cut(s)	634, 1837
ScrFI	CCNGG	7 cut(s)	134, 154, 745, 1271, 1368, 1840, 1867
SduI	GDGCHC	4 cut(s)	349, 820, 1693, 1921
SfaNI	GCATC	7 cut(s)	152, 432, 1214, 1674, 1722, 1759, 1893
SinI	GGWCC	4 cut(s)	184, 226, 1451, 1878
SmiMI	CAYNNNNRTG	2 cut(s)	305, 1572
SphI	GCATGC	1 cut(s)	1429
SseBI	AGGCCT	1 cut(s)	668
SsiI	CCGC	1 cut(s)	71
SspI	AATATT	1 cut(s)	1185
SspMI	CTAG	2 cut(s)	1085, 1637
StuI	AGGCCT	1 cut(s)	668
StyD4I	CCNGG	7 cut(s)	132, 152, 743, 1269, 1366, 1838, 1865
TaaI	ACNGT	5 cut(s)	315, 401, 822, 1517, 1553
TaqI	TCGA	3 cut(s)	763, 995, 1965
TaqII	GACCGA	2 cut(s)	738, 1622
TatI	WGTACW	2 cut(s)	50, 1564
TauI	GCSGC	1 cut(s)	73
TfiI	GAWTC	3 cut(s)	98, 979, 1112
Tru1I	TTAA	7 cut(s)	341, 504, 648, 915, 1442, 1548, 1745
Tru9I	TTAA	7 cut(s)	341, 504, 648, 915, 1442, 1548, 1745
TscAI	CASTG	4 cut(s)	123, 607, 825, 1290
TseFI	GTSAC	4 cut(s)	464, 1079, 1275, 1306
TseI	GCWGC	6 cut(s)	575, 592, 857, 902, 1145, 1589
Tsp45I	GTSAC	4 cut(s)	464, 1079, 1275, 1306
TspDTI	ATGAA	5 cut(s)	27, 323, 1336, 1352, 1648
TspGWI	ACGGA	2 cut(s)	696, 1936
TspRI	CASTG	4 cut(s)	123, 607, 825, 1290
VneI	GTGCAC	1 cut(s)	816
VpaK11BI	GGWCC	4 cut(s)	184, 226, 1451, 1878
XapI	RAATTY	5 cut(s)	739, 753, 833, 917, 1956
XceI	RCATGY	2 cut(s)	1429, 1905
XcmI	CCANNNNNNNNNTGG	2 cut(s)	276, 1198
XspI	CTAG	2 cut(s)	1085, 1637
ZrmI	AGTACT	1 cut(s)	52

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.