Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0014740

Physical Location & Seq

Genomic Coordinates Reverse (-)

4149025 .. 4152649

Gene Structure 3625 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG056700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2298 bp

ATGGACCTCACTGCCAATGGTGGGATGAGGTGGGAGGATGTCGAGGACCGGTTTGACCGGCTTGCCATCACACATTGCCAAATTGATCCAGTTATAAAATGGTCTGATTTTGGTTTGTGCATAGGGATGAAACAGTCGCAAGAGTTTGCTAATCAGCTATTAAGGGCTCTAAGGAAAAGCAAGGATTGTAATTTTTGTATGAGGAAAGATGAACTGCACAGTTACTGGTGTCGTATGACTGACCCTTGCTTCAATTCAAGGATGCAGATTTTCTTTGACTTGTGTGACAGAAACATGGAAGGAAGAATGACTGAGATAGATATTAAGCAGACTATTATACTAAGTGCTACTACAAATAAGTTATTTTTGACACCTGAGGAAGCAGAAGACTATGCTGCTTTAGTCATGGAGCTGCTTGACACTGAAAAAAGAGGCTACATTGAGCTTCCCCAATTTGAGACTCTTTTTAAAGTGAGCTTATCAAAGGCCTCCTTCTCAAATAATCACTTGTCAATCAGACATGATCCGTATCACAATTTTGACCGAGTTCATGAGCCAAATTCCAGGATAGAAATTTTGTTTCGATCTTATTGGCGACGAGCATGGATAGTTTTGTTGTGGTTGACCATATGTAGTGCACTGTTCACTTGGAAATTTCTGCAATATAGGCATAGAGCAGCTTTTCAAGTAATGGGGTACTGCCTATCCTCTGCCAAAGGTGCTGCTGAAACCCTTAAATTCAACATGGCTCTAATTCTCCTCCCTGTATGTCGTAATACAATTACATGGCTCCGAAGGAATCGTTCAGTCAACTCGATCATTCCATTCAATGACACTATCAACTTCCACAAGCTCATCGCAGGAGGGATAGTAGTAGGAGTTATCCTACATGGTGGTTGTCACCTAGCCTGTGATTTACCAAGAATTAGTGATTCAGATCATGTAATCTTCAGGCAAACAATAGCTGCCCAATTCGGGTACCATCAACCATCATACTTTGAAATATTGTCCACAAAGGAAGTGGCATCAGGGATTGGTATGGTAATACTAATGGCCATAGCATTCTCACTTGCAACAACATGGCCACGCCGGGGGTCACCTTCACTGCCTAAGTCTGTCCGGAATGTCACAGGATACAATACCTTTTGGTACTCACATCACTTGTTCATACCTGTATATGCATTGCTCATTTTTCACTCTATATTCCTCTTCCTTACAAACAACGTAAATGAAAAAACGACATGGATGTACATTGCCATTCCAGTTCTGTTATATACTGGAGAACGAGTATTTCGAGCCATGAGATCAGGATTTTATGAGGTGGAAATGTTGAAGGCAAGTATTCATCCTGGAAAAGTTGTGTCCCTCAAATTGCACAAACCAAAAGGTTTCAAGTACCTGAGTGGCATGTACATATTCATTCAATGCCCTCAGATTTCGCCATTTGAATGGCACCCGTTTTCGTTAACATCAGGACCAGAAGATGACTACCTAAGTGTGCATATTAGAACTTCTGGGGACTGGAGTTACCAAATATACAGTCTTTTCCAAGAGGCAACATTATCTGGACTTAACAGTTACCCCAAAGTACACATTGATGGGCCTTATGGTGCTGCTTCCCAAGACCATATCAAGTATGATATCATTGTTCTAATCGGTCTAGGCATAGGCGCTACACCTTTCATTGGCATCCTCAAAGATATTGTCAATGGTGCTCAAAACTCATCACATTATGATCATCACTCTGGTTGCAGAGAATGCAGCTCAAGAAAGTCTCCACTAAAAGCCTATCTTTTTTGGGTCACAAGGGAACAAAGTTCCTTTGAATGGTTTAGAGACATCATGAAGGAAATATCAAACTCAAGCGAAAAGCAGTCTGTTGTAGAGATGCACAATTTCTTAACTTCTGTGTATCAAGAGGGAGATGCGCGCTCAGTTCTAATAAGTGCAATACAAGCATTGCATTATGCCAAAAATGGGATTGACTTTGTTTCCCGGACTCCGGTAAGAACACATTTTGCCCGGCCAAACTGGTCCAGCATCTTCTCAAAATTGGCATGTAAACACAGAAGAGCACGGATTGGTGAGAAACTCCCGGAAAACAGAAAGAAATTTATGTCGATTGATCGCTGCTATATGCTAATTGAAAATTTGGGTTTTTTCTTGGACAGGGGTTTTCTACTGTGGCGCATCAACCTTAGCAAACGAGTTGGAGGGAATGTGTACCAAATTTTCGACCAAAACTTCCACAAGATTTGTATTTCACAAGGAGAATTATTAACAGGATTAGACATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000160 GO:0001101 GO:0002252 GO:0002376 GO:0002679 GO:0003674 GO:0003824 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0006970 GO:0007154 GO:0007165 GO:0007231 GO:0008150 GO:0008152 GO:0009058 GO:0009628 GO:0009719 GO:0009723 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009873 GO:0009987 GO:0010033 GO:0010119 GO:0010941 GO:0016020 GO:0016174 GO:0016491 GO:0016651 GO:0016999 GO:0017000 GO:0017144 GO:0023052 GO:0032870 GO:0033036 GO:0033037 GO:0033500 GO:0033554 GO:0033993 GO:0035556 GO:0042221 GO:0042592 GO:0042743 GO:0043067 GO:0043069 GO:0044237 GO:0044249 GO:0044464 GO:0045730 GO:0048519 GO:0048523 GO:0048878 GO:0050664 GO:0050665 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051186 GO:0051188 GO:0051716 GO:0052542 GO:0052545 GO:0055114 GO:0060548 GO:0065007 GO:0065008 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071310 GO:0071369 GO:0071396 GO:0071470 GO:0071495 GO:0071944 GO:0072593 GO:0097305 GO:0097306 GO:0104004 GO:1901700 GO:1901701 GO:1903409

KEGG Pathways

Metabolic & Signaling

ko04016 ko04626 map04016 map04626

Pfam Domains

Protein Families

FAD_binding_8 Ferric_reduct NADPH_Ox NAD_binding_6

Protein Analysis

765

Amino Acids

88.25

Weight (kDa)

8.95

Isoelectric Point (pI)

44.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NADPH_Ox	PF08414	6 - 86	4.7e-17	Respiratory burst NADPH oxidase
Ferric_reduct	PF01794	249 - 396	2.4e-09	Ferric reductase like transmembrane component
FAD_binding_8	PF08022	439 - 540	1.4e-27	FAD-binding domain
NAD_binding_6	PF08030	546 - 695	4.9e-32	Ferric reductase NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0014740)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g13850 FvH4_5g13850 FvH4_5g13850
malus_domestica	MD14G1211700.v1.1
prunus_persica	Prupe.5G204900_v2.0.a1 Prupe.5G204900_v2.0.a1
pyrus_communis	pycom14g17530
rosa_chinensis	RchiOBHm_Chr7g0183081
rosa_laevigata	RLG00000005080
rosa_multiflora	Rmu_ssc0000111.1_g000005
rosa_roxburghii	Rroxscaffold_3G00270780
rosa_rugosa	Rorug06G0452600
rosa_samantha	Rh7AG055900 Rh7BG055200 Rh7CG056700 Rh7DG055400
rosa_wichuraiana	Rw7G004550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	95
Acc65I	GGTACC	1 cut(s)	978
AccB1I	GGYRCC	2 cut(s)	978, 1452
AccII	CGCG	1 cut(s)	1930
AccIII	TCCGGA	1 cut(s)	1119
AclWI	GGATC	2 cut(s)	80, 518
AcoI	YGGCCR	3 cut(s)	1053, 1082, 2024
AcsI	RAATTY	7 cut(s)	559, 573, 653, 737, 2111, 2149, 2229
AcuI	CTGAAG	1 cut(s)	934
AfaI	GTAC	8 cut(s)	698, 980, 1151, 1250, 1397, 1412, 1590, 2225
AfiI	CCNNNNNNNGG	7 cut(s)	21, 975, 1091, 1685, 1827, 1977, 2002
AgeI	ACCGGT	1 cut(s)	48
AjnI	CCWGG	2 cut(s)	563, 1348
AluBI	AGCT	8 cut(s)	157, 412, 445, 477, 680, 853, 965, 1764
AluI	AGCT	8 cut(s)	157, 412, 445, 477, 680, 853, 965, 1764
Alw21I	GWGCWC	3 cut(s)	640, 1717, 2077
Alw26I	GTCTC	3 cut(s)	452, 1779, 1830
Alw44I	GTGCAC	1 cut(s)	636
AlwI	GGATC	2 cut(s)	80, 518
AlwNI	CAGNNNCTG	1 cut(s)	225
Aor13HI	TCCGGA	1 cut(s)	1119
AoxI	GGCC	5 cut(s)	486, 1053, 1082, 1601, 2024
ApaLI	GTGCAC	1 cut(s)	636
ApeKI	GCWGC	8 cut(s)	395, 412, 677, 722, 965, 1613, 1761, 2130
ApoI	RAATTY	7 cut(s)	559, 573, 653, 737, 2111, 2149, 2229
ArsI	GACNNNNNNTTYG	4 cut(s)	1525, 1557, 1689, 1721
AsiGI	ACCGGT	1 cut(s)	48
Asp718I	GGTACC	1 cut(s)	978
AspLEI	GCGC	4 cut(s)	1673, 1930, 1932, 2190
AspS9I	GGNCC	5 cut(s)	4, 46, 1475, 1601, 2034
AsuC2I	CCSGG	4 cut(s)	1091, 1996, 2023, 2096
AsuHPI	GGTGA	3 cut(s)	893, 1089, 2096
AvaII	GGWCC	4 cut(s)	4, 46, 1475, 2034
AxyI	CCTNAGG	1 cut(s)	375
BaeGI	GKGCMC	1 cut(s)	640
BalI	TGGCCA	2 cut(s)	1055, 1084
BanI	GGYRCC	2 cut(s)	978, 1452
BanII	GRGCYC	1 cut(s)	169
BbsI	GAAGAC	1 cut(s)	393
Bbv12I	GWGCWC	3 cut(s)	640, 1717, 2077
BbvI	GCAGC	8 cut(s)	382, 399, 689, 709, 952, 1600, 1773, 2117
BccI	CCATC	4 cut(s)	74, 990, 997, 1592
BciT130I	CCWGG	2 cut(s)	565, 1350
BciVI	GTATCC	1 cut(s)	1127
BclI	TGATCA	1 cut(s)	1735
BcnI	CCSGG	4 cut(s)	1091, 1996, 2023, 2096
BcoDI	GTCTC	3 cut(s)	452, 1779, 1830
BfaI	CTAG	2 cut(s)	905, 1661
BfoI	RGCGCY	1 cut(s)	1674
BfuI	GTATCC	1 cut(s)	1127
BisI	GCNGC	8 cut(s)	396, 413, 678, 723, 966, 1614, 1762, 2131
BlsI	GCNGC	8 cut(s)	397, 414, 679, 724, 967, 1615, 1763, 2132
Bme1390I	CCNGG	6 cut(s)	565, 1091, 1350, 1996, 2023, 2096
Bme18I	GGWCC	4 cut(s)	4, 46, 1475, 2034
BmgT120I	GGNCC	5 cut(s)	4, 46, 1475, 1601, 2034
BmiI	GGNNCC	3 cut(s)	791, 980, 1454
BmrFI	CCNGG	6 cut(s)	565, 1091, 1350, 1996, 2023, 2096
BmsI	GCATC	7 cut(s)	252, 1034, 1698, 1878, 1915, 2049, 2199
BpiI	GAAGAC	1 cut(s)	393
BpmI	CTGGAG	2 cut(s)	1299, 1543
Bpu10I	CCTNAGC	1 cut(s)	2198
BpuEI	CTTGAG	2 cut(s)	1750, 1846
BpuMI	CCSGG	4 cut(s)	1091, 1996, 2023, 2096
BsaBI	GATNNNNATC	2 cut(s)	528, 936
BsaJI	CCNNGG	1 cut(s)	1090
BsaWI	WCCGGW	3 cut(s)	48, 1119, 2002
BsaXI	ACNNNNNCTCC	6 cut(s)	855, 885, 1272, 1302, 2205, 2235
Bsc4I	CCNNNNNNNGG	7 cut(s)	21, 975, 1091, 1685, 1827, 1977, 2002
Bse118I	RCCGGY	2 cut(s)	48, 57
Bse1I	ACTGG	6 cut(s)	89, 230, 1262, 1282, 1526, 2036
Bse21I	CCTNAGG	1 cut(s)	375
Bse3DI	GCAATG	4 cut(s)	73, 1181, 1251, 1958
Bse8I	GATNNNNATC	2 cut(s)	528, 936
BseAI	TCCGGA	1 cut(s)	1119
BseBI	CCWGG	2 cut(s)	565, 1350
BseDI	CCNNGG	1 cut(s)	1090
BseGI	GGATG	7 cut(s)	30, 43, 132, 267, 1251, 1345, 1689
BseJI	GATNNNNATC	2 cut(s)	528, 936
BseLI	CCNNNNNNNGG	7 cut(s)	21, 975, 1091, 1685, 1827, 1977, 2002
BseMI	GCAATG	4 cut(s)	73, 1181, 1251, 1958
BseMII	CTCAG	5 cut(s)	303, 366, 1391, 1445, 1947
BseNI	ACTGG	6 cut(s)	89, 230, 1262, 1282, 1526, 2036
BsePI	GCGCGC	1 cut(s)	1928
BseRI	GAGGAG	1 cut(s)	749
BseSI	GKGCMC	1 cut(s)	640
BseXI	GCAGC	8 cut(s)	382, 399, 689, 709, 952, 1600, 1773, 2117
BsgI	GTGCAG	1 cut(s)	200
Bsh1236I	CGCG	1 cut(s)	1930
BshFI	GGCC	5 cut(s)	488, 1055, 1084, 1603, 2026
BshNI	GGYRCC	2 cut(s)	978, 1452
BshTI	ACCGGT	1 cut(s)	48
BsiHKAI	GWGCWC	3 cut(s)	640, 1717, 2077
BsiSI	CCGG	8 cut(s)	49, 58, 1090, 1120, 1996, 2003, 2023, 2096
BslFI	GGGAC	2 cut(s)	1348, 1532
BslI	CCNNNNNNNGG	7 cut(s)	21, 975, 1091, 1685, 1827, 1977, 2002
BsmAI	GTCTC	3 cut(s)	452, 1779, 1830
BsmFI	GGGAC	2 cut(s)	1348, 1532
BsmI	GAATGC	2 cut(s)	1061, 1763
BsnI	GGCC	5 cut(s)	488, 1055, 1084, 1603, 2026
Bsp1286I	GDGCHC	4 cut(s)	169, 640, 1717, 2077
Bsp13I	TCCGGA	1 cut(s)	1119
Bsp1407I	TGTACA	2 cut(s)	1248, 1410
Bsp143I	GATC	8 cut(s)	85, 523, 584, 816, 937, 1304, 1735, 2125
BspANI	GGCC	5 cut(s)	488, 1055, 1084, 1603, 2026
BspCNI	CTCAG	5 cut(s)	304, 367, 1392, 1444, 1946
BspEI	TCCGGA	1 cut(s)	1119
BspFNI	CGCG	1 cut(s)	1930
BspHI	TCATGA	2 cut(s)	550, 1842
BspLI	GGNNCC	3 cut(s)	791, 980, 1454
BspPI	GGATC	2 cut(s)	80, 518
BspQI	GCTCTTC	1 cut(s)	2065
BspT107I	GGYRCC	2 cut(s)	978, 1452
BsrDI	GCAATG	4 cut(s)	73, 1181, 1251, 1958
BsrFI	RCCGGY	2 cut(s)	48, 57
BsrGI	TGTACA	2 cut(s)	1248, 1410
BsrI	ACTGG	6 cut(s)	89, 230, 1262, 1282, 1526, 2036
BssAI	RCCGGY	2 cut(s)	48, 57
BssECI	CCNNGG	1 cut(s)	1090
BssHII	GCGCGC	1 cut(s)	1928
BssMI	GATC	8 cut(s)	85, 523, 584, 816, 937, 1304, 1735, 2125
Bst2UI	CCWGG	2 cut(s)	565, 1350
Bst4CI	ACNGT	6 cut(s)	135, 221, 642, 1541, 1577, 2184
Bst6I	CTCTTC	2 cut(s)	1214, 2065
BstAPI	GCANNNNNTGC	1 cut(s)	1758
BstAUI	TGTACA	2 cut(s)	1248, 1410
BstC8I	GCNNGC	2 cut(s)	63, 1930
BstEII	GGTNACC	1 cut(s)	1095
BstF5I	GGATG	7 cut(s)	30, 43, 132, 267, 1251, 1345, 1689
BstFNI	CGCG	1 cut(s)	1930
BstH2I	RGCGCY	1 cut(s)	1674
BstHHI	GCGC	4 cut(s)	1673, 1930, 1932, 2190
BstKTI	GATC	8 cut(s)	88, 526, 587, 819, 940, 1307, 1738, 2128
BstMAI	GTCTC	3 cut(s)	452, 1779, 1830
BstMBI	GATC	8 cut(s)	85, 523, 584, 816, 937, 1304, 1735, 2125
BstMWI	GCNNNNNNNGC	4 cut(s)	667, 719, 1758, 1955
BstNI	CCWGG	2 cut(s)	565, 1350
BstNSI	RCATGY	2 cut(s)	1411, 2061
BstPI	GGTNACC	1 cut(s)	1095
BstSCI	CCNGG	6 cut(s)	563, 1089, 1348, 1994, 2021, 2094
BstSLI	GKGCMC	1 cut(s)	640
BstUI	CGCG	1 cut(s)	1930
BstV1I	GCAGC	8 cut(s)	382, 399, 689, 709, 952, 1600, 1773, 2117
BstV2I	GAAGAC	1 cut(s)	393
BstXI	CCANNNNNNTGG	1 cut(s)	1449
Bsu36I	CCTNAGG	1 cut(s)	375
BsuI	GTATCC	1 cut(s)	1127
BsuRI	GGCC	5 cut(s)	488, 1055, 1084, 1603, 2026
BtgZI	GCGATG	1 cut(s)	841
BtsCI	GGATG	7 cut(s)	30, 43, 132, 267, 1251, 1345, 1689
BtsI	GCAGTG	2 cut(s)	9, 1103
BtsIMutI	CAGTG	4 cut(s)	9, 420, 638, 1103
Cac8I	GCNNGC	2 cut(s)	63, 1930
CaiI	CAGNNNCTG	1 cut(s)	225
CciI	TCATGA	2 cut(s)	550, 1842
CfoI	GCGC	4 cut(s)	1673, 1930, 1932, 2190
Cfr10I	RCCGGY	2 cut(s)	48, 57
Cfr13I	GGNCC	5 cut(s)	4, 46, 1475, 1601, 2034
Csp6I	GTAC	8 cut(s)	697, 979, 1150, 1249, 1396, 1411, 1589, 2224
CspAI	ACCGGT	1 cut(s)	48
CspCI	CAANNNNNGTGG	4 cut(s)	1002, 1037, 2237, 2272
CviQI	GTAC	8 cut(s)	697, 979, 1150, 1249, 1396, 1411, 1589, 2224
DpnI	GATC	8 cut(s)	87, 525, 586, 818, 939, 1306, 1737, 2127
DpnII	GATC	8 cut(s)	85, 523, 584, 816, 937, 1304, 1735, 2125
DraI	TTTAAA	1 cut(s)	469
EaeI	YGGCCR	3 cut(s)	1053, 1082, 2024
Eam1104I	CTCTTC	2 cut(s)	1214, 2065
EarI	CTCTTC	2 cut(s)	1214, 2065
Eco147I	AGGCCT	1 cut(s)	488
Eco24I	GRGCYC	1 cut(s)	169
Eco32I	GATATC	1 cut(s)	1642
Eco47I	GGWCC	4 cut(s)	4, 46, 1475, 2034
Eco57I	CTGAAG	1 cut(s)	934
Eco81I	CCTNAGG	1 cut(s)	375
Eco91I	GGTNACC	1 cut(s)	1095
EcoO65I	GGTNACC	1 cut(s)	1095
EcoRII	CCWGG	2 cut(s)	563, 1348
EcoRV	GATATC	1 cut(s)	1642
EcoT22I	ATGCAT	1 cut(s)	1183
EcoT38I	GRGCYC	1 cut(s)	169
FalI	AAGNNNNNCTT	4 cut(s)	476, 508, 1776, 1808
FaqI	GGGAC	2 cut(s)	1348, 1532
FauNDI	CATATG	1 cut(s)	629
FbaI	TGATCA	1 cut(s)	1735
Fnu4HI	GCNGC	8 cut(s)	396, 413, 678, 723, 966, 1614, 1762, 2131
FokI	GGATG	7 cut(s)	37, 50, 139, 274, 1258, 1332, 1676
FriOI	GRGCYC	1 cut(s)	169
Fsp4HI	GCNGC	8 cut(s)	396, 413, 678, 723, 966, 1614, 1762, 2131
FspBI	CTAG	2 cut(s)	905, 1661
GlaI	GCGC	4 cut(s)	1672, 1929, 1931, 2189
GluI	GCNGC	8 cut(s)	396, 413, 678, 723, 966, 1614, 1762, 2131
GsuI	CTGGAG	2 cut(s)	1299, 1543
HaeII	RGCGCY	1 cut(s)	1674
HaeIII	GGCC	5 cut(s)	488, 1055, 1084, 1603, 2026
HapII	CCGG	8 cut(s)	49, 58, 1090, 1120, 1996, 2003, 2023, 2096
HhaI	GCGC	4 cut(s)	1673, 1930, 1932, 2190
Hin6I	GCGC	4 cut(s)	1671, 1928, 1930, 2188
HinP1I	GCGC	4 cut(s)	1671, 1928, 1930, 2188
HincII	GTYRAC	3 cut(s)	624, 811, 1467
HindII	GTYRAC	3 cut(s)	624, 811, 1467
HinfI	GANTC	4 cut(s)	460, 799, 932, 1999
HpaI	GTTAAC	1 cut(s)	1467
HpaII	CCGG	8 cut(s)	49, 58, 1090, 1120, 1996, 2003, 2023, 2096
HphI	GGTGA	3 cut(s)	893, 1089, 2096
Hpy166II	GTNNAC	9 cut(s)	624, 638, 645, 811, 1011, 1467, 1591, 2063, 2224
Hpy188I	TCNGA	5 cut(s)	106, 518, 794, 937, 1434
Hpy188III	TCNNGA	8 cut(s)	551, 1120, 1308, 1473, 1566, 1767, 1843, 1916
Hpy8I	GTNNAC	9 cut(s)	624, 638, 645, 811, 1011, 1467, 1591, 2063, 2224
Hpy99I	CGWCG	1 cut(s)	600
HpyAV	CCTTC	6 cut(s)	293, 502, 789, 1110, 1327, 1840
HpyCH4III	ACNGT	6 cut(s)	135, 221, 642, 1541, 1577, 2184
HpyCH4IV	ACGT	1 cut(s)	1224
HpyF10VI	GCNNNNNNNGC	4 cut(s)	667, 719, 1758, 1955
HpySE526I	ACGT	1 cut(s)	1224
HspAI	GCGC	4 cut(s)	1671, 1928, 1930, 2188
Kpn2I	TCCGGA	1 cut(s)	1119
KpnI	GGTACC	1 cut(s)	982
Ksp22I	TGATCA	1 cut(s)	1735
KspAI	GTTAAC	1 cut(s)	1467
Kzo9I	GATC	8 cut(s)	85, 523, 584, 816, 937, 1304, 1735, 2125
LguI	GCTCTTC	1 cut(s)	2065
LmnI	GCTCC	2 cut(s)	409, 795
Lsp1109I	GCAGC	8 cut(s)	382, 399, 689, 709, 952, 1600, 1773, 2117
LweI	GCATC	7 cut(s)	252, 1034, 1698, 1878, 1915, 2049, 2199
MaeI	CTAG	2 cut(s)	905, 1661
MaeII	ACGT	1 cut(s)	1224
MaeIII	GTNAC	8 cut(s)	221, 284, 899, 1095, 1126, 1526, 1577, 1801
MalI	GATC	8 cut(s)	87, 525, 586, 818, 939, 1306, 1737, 2127
MboI	GATC	8 cut(s)	85, 523, 584, 816, 937, 1304, 1735, 2125
MboII	GAAGA	7 cut(s)	315, 398, 940, 1201, 1493, 2035, 2082
MhlI	GDGCHC	4 cut(s)	169, 640, 1717, 2077
MlsI	TGGCCA	2 cut(s)	1055, 1084
MluNI	TGGCCA	2 cut(s)	1055, 1084
MlyI	GAGTC	2 cut(s)	454, 1993
MmeI	TCCRAC	1 cut(s)	2191
Mox20I	TGGCCA	2 cut(s)	1055, 1084
Mph1103I	ATGCAT	1 cut(s)	1183
MroI	TCCGGA	1 cut(s)	1119
MscI	TGGCCA	2 cut(s)	1055, 1084
MseI	TTAA	8 cut(s)	161, 324, 468, 735, 1466, 1572, 1901, 2279
MslI	CAYNNNNRTG	3 cut(s)	125, 1447, 1596
Msp20I	TGGCCA	2 cut(s)	1055, 1084
MspI	CCGG	8 cut(s)	49, 58, 1090, 1120, 1996, 2003, 2023, 2096
MspR9I	CCNGG	6 cut(s)	565, 1091, 1350, 1996, 2023, 2096
Mva1269I	GAATGC	2 cut(s)	1061, 1763
MvaI	CCWGG	2 cut(s)	565, 1350
MvnI	CGCG	1 cut(s)	1930
MwoI	GCNNNNNNNGC	4 cut(s)	667, 719, 1758, 1955
NciI	CCSGG	4 cut(s)	1091, 1996, 2023, 2096
NdeI	CATATG	1 cut(s)	629
NdeII	GATC	8 cut(s)	85, 523, 584, 816, 937, 1304, 1735, 2125
NlaIV	GGNNCC	3 cut(s)	791, 980, 1454
NmuCI	GTSAC	5 cut(s)	284, 899, 1095, 1126, 1801
NsiI	ATGCAT	1 cut(s)	1183
NspI	RCATGY	2 cut(s)	1411, 2061
PagI	TCATGA	2 cut(s)	550, 1842
PauI	GCGCGC	1 cut(s)	1928
PceI	AGGCCT	1 cut(s)	488
PciSI	GCTCTTC	1 cut(s)	2065
PcsI	WCGNNNNNNNCGW	1 cut(s)	1291
PctI	GAATGC	2 cut(s)	1061, 1763
PfeI	GAWTC	2 cut(s)	799, 932
PfoI	TCCNGGA	4 cut(s)	563, 1348, 1994, 2094
PinAI	ACCGGT	1 cut(s)	48
PkrI	GCNGC	8 cut(s)	397, 414, 679, 724, 967, 1615, 1763, 2132
PleI	GAGTC	2 cut(s)	454, 1993
PpsI	GAGTC	2 cut(s)	454, 1993
PsiI	TTATAA	1 cut(s)	95
Psp6I	CCWGG	2 cut(s)	563, 1348
PspEI	GGTNACC	1 cut(s)	1095
PspGI	CCWGG	2 cut(s)	563, 1348
PspN4I	GGNNCC	3 cut(s)	791, 980, 1454
PspPI	GGNCC	5 cut(s)	4, 46, 1475, 1601, 2034
PstNI	CAGNNNCTG	1 cut(s)	225
PteI	GCGCGC	1 cut(s)	1928
RsaI	GTAC	8 cut(s)	698, 980, 1151, 1250, 1397, 1412, 1590, 2225
RsaNI	GTAC	8 cut(s)	697, 979, 1150, 1249, 1396, 1411, 1589, 2224
RseI	CAYNNNNRTG	3 cut(s)	125, 1447, 1596
SapI	GCTCTTC	1 cut(s)	2065
SaqAI	TTAA	8 cut(s)	161, 324, 468, 735, 1466, 1572, 1901, 2279
SatI	GCNGC	8 cut(s)	396, 413, 678, 723, 966, 1614, 1762, 2131
Sau3AI	GATC	8 cut(s)	85, 523, 584, 816, 937, 1304, 1735, 2125
Sau96I	GGNCC	5 cut(s)	4, 46, 1475, 1601, 2034
SchI	GAGTC	2 cut(s)	454, 1993
ScrFI	CCNGG	6 cut(s)	565, 1091, 1350, 1996, 2023, 2096
SduI	GDGCHC	4 cut(s)	169, 640, 1717, 2077
SfaNI	GCATC	7 cut(s)	252, 1034, 1698, 1878, 1915, 2049, 2199
SinI	GGWCC	4 cut(s)	4, 46, 1475, 2034
SmiMI	CAYNNNNRTG	3 cut(s)	125, 1447, 1596
SmlI	CTYRAG	2 cut(s)	1765, 1861
SmoI	CTYRAG	2 cut(s)	1765, 1861
SseBI	AGGCCT	1 cut(s)	488
SspI	AATATT	1 cut(s)	1005
SspMI	CTAG	2 cut(s)	905, 1661
StuI	AGGCCT	1 cut(s)	488
StyD4I	CCNGG	6 cut(s)	563, 1089, 1348, 1994, 2021, 2094
TaaI	ACNGT	6 cut(s)	135, 221, 642, 1541, 1577, 2184
TaiI	ACGT	1 cut(s)	1227
TaqI	TCGA	6 cut(s)	42, 583, 815, 1294, 2120, 2235
TaqII	GACCGA	2 cut(s)	558, 1646
TatI	WGTACW	3 cut(s)	1248, 1410, 1588
TfiI	GAWTC	2 cut(s)	799, 932
Tru1I	TTAA	8 cut(s)	161, 324, 468, 735, 1466, 1572, 1901, 2279
Tru9I	TTAA	8 cut(s)	161, 324, 468, 735, 1466, 1572, 1901, 2279
TscAI	CASTG	4 cut(s)	16, 427, 645, 1110
TseFI	GTSAC	5 cut(s)	284, 899, 1095, 1126, 1801
TseI	GCWGC	8 cut(s)	395, 412, 677, 722, 965, 1613, 1761, 2130
Tsp45I	GTSAC	5 cut(s)	284, 899, 1095, 1126, 1801
TspDTI	ATGAA	9 cut(s)	143, 225, 539, 1156, 1245, 1334, 1408, 1672, 1859
TspGWI	ACGGA	2 cut(s)	516, 2092
TspRI	CASTG	4 cut(s)	16, 427, 645, 1110
VneI	GTGCAC	1 cut(s)	636
VpaK11BI	GGWCC	4 cut(s)	4, 46, 1475, 2034
XapI	RAATTY	7 cut(s)	559, 573, 653, 737, 2111, 2149, 2229
XceI	RCATGY	2 cut(s)	1411, 2061
XcmI	CCANNNNNNNNNTGG	2 cut(s)	96, 1018
XspI	CTAG	2 cut(s)	905, 1661
Zsp2I	ATGCAT	1 cut(s)	1183

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.