Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0014740

Physical Location & Seq

Genomic Coordinates Reverse (-)

58142959 .. 58147155

Gene Structure 4197 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0452600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2145 bp

ATGGGGTGCGCGCAATCGAGAATCGACAATGAGGAATCGGTGTCGAGATGCAAGGAGCGGAGGAACCTGATGAGAGAAGCGGTGGTGGCCAGAAACGCCTTCGCGGCCGGCCATTCCGGCTACGTCATGGCCTTGAAGAACACCGGCGCCGCCTTAAGCGATTACGGCCACGGAGAATCACAGCGGACACAAGAAGAGCTACTCCTCCATCACGACCAGCGGCCACTCGACCCCACCGCAACCGAGCCACCGCCTCCTCCTCCTCCGCCGCTCGAACACCTCCCTCCGCCGCCGCCGCCTCTGCCGACTTTCACTCCCAGCCCGCCGATCAAGCGCGCCACCAGCCTGCCGACGGAGGTCAGGAAAACGAGGATGCAGGGGGCTAGGTTGCCCATTGCTGAGGAGGACGAGGGCGAGGAAGAGGAGGACCATGAGGAAGAAAAAGGGTTTCGCCGGAGATCGAGAAAGGAAATGGGCGCGGCGGCGGCGACGGGTTCCTCATCGCCGCAGACGCCGGAGATGAAGGCGGTGCCGCCGCCGTTGCCGGAGTCCAAGGGTGCGGCTTGGGACTATTTCTTCATGGTGGATAACATGCCGGGGCACAGCTTGAGTGAGAATGAAGGTGAAGAGTTTGGTGAAGATGAGAATGTGAATGATTTGGGTGATGGGGATGAGGATGAGCCCAAGACCCCGGAGAAAGCGGAGGAGATTCAGGTGAAGCCGGAGGAGATTCCGGTGTCTCCAGTGACTCCGGCGACAATTGAGCATTCGAAGACAGCCCCACCGGATTTTCAGAGGATGGTGATGCCCGGTTTTACTTTGATGGAAATATTGAATCAGATTGATGATCATTTCTTAAAGGCCTCGGAGAGTGCTCAGGAGGTTTCCAAGATGCTTGAGGCCACTCGATTGCATTATCACTCGAATTTTGCTGATAATCGAGGACACATTGATCATTCTGCACGAGTCATGCGTGTTATTACTTGGAATAAATCCTTCAGAGGCTTATCAAATGGTGATGGAGCAAAGGAGGAAGATTCAGATGATTATGAAACTCATGCCACTGTTTTGGATAAGTTGTTAGCATGGGAGAAGAAACTTTATGATGAAGTGAAGCAAGGGGAGCTTATGAAGGTTGAGTATCAGAGAAAGGTTGCTCTACTAAACAAGCAGAAAAAACGCAATGCTAGTGCTGAAACCTTGGAAAAAACGAAAGCAGCAGTAAGTCACTTGCATACAAGATATATTGTTGACATGCAGTCCATGGACTCTACAGTTTCAGAAGTGAATCAGATACGGGATGAGCAGCTGTACCCTAAACTTGTTTCTCTAGCTGACGCGATGGGAAAAATGTGGGAAAATATGTGTGCGCATCATGACAGCCAGCTGAAGATTGTTATGGACCTGAAAGCCCTTGACATTGCCCATACTCCGATGGAAACGACCAGGCACCACCATGAACGCACTGAACAGCTATTTAATGTTGTCCAACATTGGCATTCCGAATTTGAAAAGCTTGTGATTCATCAGAAACAATACATCCAAGCATTGAATAGCTGGTTGAAGTTGAATCTGATTCCTATTGAAAGCAGCTTAAAAGAGAAAATCTCTTCCCCTCCAAGAGTTCAGCGTCCCCCAATTCAACCGCTTCTCCATGCATGGCATGATTTTCTTGAAAAGCTTCCTGATGAACTTGCAAAATCTGCAACATCATCCTTTGCGGCTGTGATAAAGACTATATTACTTCATCAGGAGGAAGAGATGAAGCTAAAGGAGCAATATGAGAATACAAGGAAGGACCACATGCGTAAAAATCAGGCATTTCAAGACTGGTACCAGAAGTATATGCAGCGTAAGGGGCCTGGTGAAGCAGATCAGGAGAAAAGTGAAGATGCGAACCACAAGGATCCTATTGCAGAGAGGCAATTTGCAGTTGAGAGCTTGAAGAAGAAAATGGAAGAGGAAGCTGAAGCTCACCAGAGACATTGTATCCAGGTCAGAGAGAAGTCACTTGGGAGTCTCAAAACTCGCTTGCCTGAGCTCTTCCGTGCAATGTCAGACTATGCTCACACATGTGCTGATGCTTACGGAAAACTTAGGTCCATCACAATGCCACAAGCTTCAAATGGTAACTCTCATGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000160 GO:0001101 GO:0002252 GO:0002376 GO:0002679 GO:0003674 GO:0003824 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0006970 GO:0007154 GO:0007165 GO:0007231 GO:0008150 GO:0008152 GO:0009058 GO:0009628 GO:0009719 GO:0009723 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009873 GO:0009987 GO:0010033 GO:0010119 GO:0010941 GO:0016020 GO:0016174 GO:0016491 GO:0016651 GO:0016999 GO:0017000 GO:0017144 GO:0023052 GO:0032870 GO:0033036 GO:0033037 GO:0033500 GO:0033554 GO:0033993 GO:0035556 GO:0042221 GO:0042592 GO:0042743 GO:0043067 GO:0043069 GO:0044237 GO:0044249 GO:0044464 GO:0045730 GO:0048519 GO:0048523 GO:0048878 GO:0050664 GO:0050665 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051186 GO:0051188 GO:0051716 GO:0052542 GO:0052545 GO:0055114 GO:0060548 GO:0065007 GO:0065008 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071310 GO:0071369 GO:0071396 GO:0071470 GO:0071495 GO:0071944 GO:0072593 GO:0097305 GO:0097306 GO:0104004 GO:1901700 GO:1901701 GO:1903409

KEGG Pathways

Metabolic & Signaling

ko04016 ko04626 map04016 map04626

Pfam Domains

Protein Families

FAD_binding_8 Ferric_reduct NADPH_Ox NAD_binding_6

Protein Analysis

714

Amino Acids

81.28

Weight (kDa)

5.74

Isoelectric Point (pI)

50.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF630	PF04783	1 - 59	9.7e-23	Protein of unknown function (DUF630)
DUF632	PF04782	274 - 578	1.4e-103	Protein of unknown function (DUF632)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014740)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g13850 FvH4_5g13850 FvH4_5g13850
malus_domestica	MD14G1211700.v1.1
prunus_persica	Prupe.5G204900_v2.0.a1 Prupe.5G204900_v2.0.a1
pyrus_communis	pycom14g17530
rosa_chinensis	RchiOBHm_Chr7g0183081
rosa_laevigata	RLG00000005080
rosa_multiflora	Rmu_ssc0000111.1_g000005
rosa_roxburghii	Rroxscaffold_3G00270780
rosa_rugosa	Rorug06G0452600
rosa_samantha	Rh7AG055900 Rh7BG055200 Rh7CG056700 Rh7DG055400
rosa_wichuraiana	Rw7G004550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1371
Acc65I	GGTACC	1 cut(s)	1833
AccB1I	GGYRCC	4 cut(s)	146, 529, 1449, 1833
AccBSI	CCGCTC	2 cut(s)	58, 271
AccII	CGCG	5 cut(s)	11, 104, 336, 479, 1340
AclWI	GGATC	2 cut(s)	1901, 1914
AcoI	YGGCCR	5 cut(s)	87, 105, 109, 166, 221
AcsI	RAATTY	2 cut(s)	925, 1505
AcuI	CTGAAG	3 cut(s)	982, 1409, 1989
AcyI	GRCGYC	2 cut(s)	147, 512
AfaI	GTAC	2 cut(s)	1313, 1835
AfiI	CCNNNNNNNGG	1 cut(s)	352
AflII	CTTAAG	1 cut(s)	154
AflIII	ACRYGT	1 cut(s)	2072
AhdI	GACNNNNNGTC	1 cut(s)	1258
AjnI	CCWGG	3 cut(s)	1445, 1861, 1992
AleI	CACNNNNGTG	1 cut(s)	2073
Alw21I	GWGCWC	2 cut(s)	877, 2043
Alw26I	GTCTC	3 cut(s)	744, 1975, 2024
AlwI	GGATC	2 cut(s)	1901, 1914
AoxI	GGCC	9 cut(s)	87, 105, 109, 129, 166, 221, 861, 900, 1859
ApeKI	GCWGC	4 cut(s)	1217, 1306, 1590, 1849
ApoI	RAATTY	2 cut(s)	925, 1505
Asp700I	GAANNNNTTC	1 cut(s)	1680
Asp718I	GGTACC	1 cut(s)	1833
AspLEI	GCGC	7 cut(s)	11, 13, 149, 336, 338, 479, 1372
AspS9I	GGNCC	5 cut(s)	427, 1402, 1798, 1859, 2100
AsuC2I	CCSGG	3 cut(s)	597, 692, 810
AsuHPI	GGTGA	8 cut(s)	635, 647, 674, 727, 814, 1028, 1877, 1967
AsuII	TTCGAA	1 cut(s)	770
AvaII	GGWCC	4 cut(s)	427, 1402, 1798, 2100
BaeGI	GKGCMC	1 cut(s)	603
BalI	TGGCCA	1 cut(s)	89
BamHI	GGATCC	1 cut(s)	1906
BanI	GGYRCC	4 cut(s)	146, 529, 1449, 1833
BanII	GRGCYC	2 cut(s)	684, 2043
BauI	CACGAG	1 cut(s)	963
BbsI	GAAGAC	1 cut(s)	779
Bbv12I	GWGCWC	2 cut(s)	877, 2043
BbvCI	CCTCAGC	1 cut(s)	399
BbvI	GCAGC	4 cut(s)	1229, 1318, 1602, 1861
BccI	CCATC	8 cut(s)	216, 659, 793, 817, 1013, 1336, 1429, 2111
BceAI	ACGGC	2 cut(s)	181, 523
BciT130I	CCWGG	3 cut(s)	1447, 1863, 1994
BciVI	GTATCC	1 cut(s)	2000
BclI	TGATCA	2 cut(s)	847, 952
BcnI	CCSGG	3 cut(s)	597, 692, 810
BcoDI	GTCTC	3 cut(s)	744, 1975, 2024
BfaI	CTAG	3 cut(s)	384, 1188, 1331
BfmI	CTRYAG	1 cut(s)	1272
BfoI	RGCGCY	1 cut(s)	150
BfrI	CTTAAG	1 cut(s)	154
BfuI	GTATCC	1 cut(s)	2000
BglI	GCCNNNNNGGC	2 cut(s)	104, 117
Bme1390I	CCNGG	6 cut(s)	597, 692, 810, 1447, 1863, 1994
Bme18I	GGWCC	4 cut(s)	427, 1402, 1798, 2100
BmeRI	GACNNNNNGTC	1 cut(s)	1258
BmgT120I	GGNCC	5 cut(s)	427, 1402, 1798, 1859, 2100
BmiI	GGNNCC	8 cut(s)	65, 148, 496, 531, 1451, 1835, 1860, 1908
BmrFI	CCNGG	6 cut(s)	597, 692, 810, 1447, 1863, 1994
BmsI	GCATC	7 cut(s)	38, 363, 795, 882, 1381, 1882, 2071
BoxI	GACNNNNGTC	1 cut(s)	356
BpiI	GAAGAC	1 cut(s)	779
BplI	GAGNNNNNCTC	2 cut(s)	1592, 1624
BpmI	CTGGAG	1 cut(s)	726
Bpu10I	CCTNAGC	3 cut(s)	399, 876, 2037
Bpu14I	TTCGAA	1 cut(s)	770
BpuEI	CTTGAG	2 cut(s)	628, 917
BpuMI	CCSGG	3 cut(s)	597, 692, 810
BsaHI	GRCGYC	2 cut(s)	147, 512
BsaJI	CCNNGG	7 cut(s)	169, 552, 596, 690, 864, 1200, 1263
BsaWI	WCCGGW	2 cut(s)	733, 784
BsaXI	ACNNNNNCTCC	4 cut(s)	298, 328, 1635, 1665
Bsc4I	CCNNNNNNNGG	1 cut(s)	352
Bse118I	RCCGGY	2 cut(s)	107, 143
Bse1I	ACTGG	2 cut(s)	743, 1835
Bse3DI	GCAATG	4 cut(s)	393, 1189, 1419, 2058
BseBI	CCWGG	3 cut(s)	1447, 1863, 1994
BseDI	CCNNGG	7 cut(s)	169, 552, 596, 690, 864, 1200, 1263
BseGI	GGATG	7 cut(s)	378, 676, 682, 804, 1306, 1539, 1712
BseLI	CCNNNNNNNGG	1 cut(s)	352
BseMI	GCAATG	4 cut(s)	393, 1189, 1419, 2058
BseMII	CTCAG	3 cut(s)	390, 890, 2028
BseNI	ACTGG	2 cut(s)	743, 1835
BsePI	GCGCGC	2 cut(s)	9, 334
BseRI	GAGGAG	8 cut(s)	194, 246, 249, 252, 416, 437, 719, 740
BseSI	GKGCMC	1 cut(s)	603
BseX3I	CGGCCG	1 cut(s)	105
BseXI	GCAGC	4 cut(s)	1229, 1318, 1602, 1861
BseYI	CCCAGC	1 cut(s)	317
BsgI	GTGCAG	1 cut(s)	945
Bsh1236I	CGCG	5 cut(s)	11, 104, 336, 479, 1340
Bsh1285I	CGRYCG	1 cut(s)	108
BshFI	GGCC	9 cut(s)	89, 107, 111, 131, 168, 223, 863, 902, 1861
BshNI	GGYRCC	4 cut(s)	146, 529, 1449, 1833
BsiEI	CGRYCG	1 cut(s)	108
BsiHKAI	GWGCWC	2 cut(s)	877, 2043
BslFI	GGGAC	2 cut(s)	581, 1617
BslI	CCNNNNNNNGG	1 cut(s)	352
BsmAI	GTCTC	3 cut(s)	744, 1975, 2024
BsmFI	GGGAC	2 cut(s)	581, 1617
BsmI	GAATGC	2 cut(s)	766, 1498
BsnI	GGCC	9 cut(s)	89, 107, 111, 131, 168, 223, 863, 902, 1861
Bsp119I	TTCGAA	1 cut(s)	770
Bsp1286I	GDGCHC	4 cut(s)	603, 684, 877, 2043
Bsp143I	GATC	6 cut(s)	327, 458, 847, 952, 1873, 1906
Bsp19I	CCATGG	1 cut(s)	1263
BspANI	GGCC	9 cut(s)	89, 107, 111, 131, 168, 223, 863, 902, 1861
BspCNI	CTCAG	3 cut(s)	391, 889, 2029
BspFNI	CGCG	5 cut(s)	11, 104, 336, 479, 1340
BspHI	TCATGA	1 cut(s)	1375
BspLI	GGNNCC	8 cut(s)	65, 148, 496, 531, 1451, 1835, 1860, 1908
BspPI	GGATC	2 cut(s)	1901, 1914
BspQI	GCTCTTC	2 cut(s)	189, 2048
BspT104I	TTCGAA	1 cut(s)	770
BspT107I	GGYRCC	4 cut(s)	146, 529, 1449, 1833
BspTI	CTTAAG	1 cut(s)	154
BsrBI	CCGCTC	2 cut(s)	58, 271
BsrDI	GCAATG	4 cut(s)	393, 1189, 1419, 2058
BsrFI	RCCGGY	2 cut(s)	107, 143
BsrI	ACTGG	2 cut(s)	743, 1835
BssAI	RCCGGY	2 cut(s)	107, 143
BssECI	CCNNGG	7 cut(s)	169, 552, 596, 690, 864, 1200, 1263
BssHII	GCGCGC	2 cut(s)	9, 334
BssMI	GATC	6 cut(s)	327, 458, 847, 952, 1873, 1906
BssNI	GRCGYC	2 cut(s)	147, 512
BssSI	CACGAG	1 cut(s)	963
BssT1I	CCWWGG	3 cut(s)	552, 1200, 1263
Bst2BI	CACGAG	1 cut(s)	963
Bst2UI	CCWGG	3 cut(s)	1447, 1863, 1994
Bst4CI	ACNGT	2 cut(s)	1066, 1276
Bst6I	CTCTTC	7 cut(s)	189, 414, 621, 1615, 1752, 1953, 2048
BstACI	GRCGYC	2 cut(s)	147, 512
BstAFI	CTTAAG	1 cut(s)	154
BstAPI	GCANNNNNTGC	1 cut(s)	1703
BstBI	TTCGAA	1 cut(s)	770
BstC8I	GCNNGC	7 cut(s)	11, 109, 323, 336, 347, 1385, 2033
BstDEI	CTNAG	4 cut(s)	399, 876, 2037, 2096
BstDSI	CCRYGG	2 cut(s)	169, 1263
BstF5I	GGATG	7 cut(s)	378, 676, 682, 804, 1306, 1539, 1712
BstFNI	CGCG	5 cut(s)	11, 104, 336, 479, 1340
BstH2I	RGCGCY	1 cut(s)	150
BstHHI	GCGC	7 cut(s)	11, 13, 149, 336, 338, 479, 1372
BstKTI	GATC	6 cut(s)	330, 461, 850, 955, 1876, 1909
BstMAI	GTCTC	3 cut(s)	744, 1975, 2024
BstMBI	GATC	6 cut(s)	327, 458, 847, 952, 1873, 1906
BstMCI	CGRYCG	1 cut(s)	108
BstNI	CCWGG	3 cut(s)	1447, 1863, 1994
BstNSI	RCATGY	4 cut(s)	595, 1258, 1807, 2076
BstPAI	GACNNNNGTC	1 cut(s)	356
BstSCI	CCNGG	6 cut(s)	595, 690, 808, 1445, 1861, 1992
BstSFI	CTRYAG	1 cut(s)	1272
BstSLI	GKGCMC	1 cut(s)	603
BstUI	CGCG	5 cut(s)	11, 104, 336, 479, 1340
BstV1I	GCAGC	4 cut(s)	1229, 1318, 1602, 1861
BstV2I	GAAGAC	1 cut(s)	779
BstX2I	RGATCY	1 cut(s)	1906
BstXI	CCANNNNNNTGG	1 cut(s)	1069
BstYI	RGATCY	1 cut(s)	1906
BstZI	CGGCCG	1 cut(s)	105
BsuI	GTATCC	1 cut(s)	2000
BsuRI	GGCC	9 cut(s)	89, 107, 111, 131, 168, 223, 863, 902, 1861
BtgI	CCRYGG	2 cut(s)	169, 1263
BtgZI	GCGATG	2 cut(s)	486, 1355
BtsCI	GGATG	7 cut(s)	378, 676, 682, 804, 1306, 1539, 1712
BtsIMutI	CAGTG	3 cut(s)	750, 1062, 1464
Cac8I	GCNNGC	7 cut(s)	11, 109, 323, 336, 347, 1385, 2033
CciI	TCATGA	1 cut(s)	1375
CfoI	GCGC	7 cut(s)	11, 13, 149, 336, 338, 479, 1372
Cfr10I	RCCGGY	2 cut(s)	107, 143
Cfr13I	GGNCC	5 cut(s)	427, 1402, 1798, 1859, 2100
CseI	GACGC	3 cut(s)	520, 1346, 1619
Csp6I	GTAC	2 cut(s)	1312, 1834
CviQI	GTAC	2 cut(s)	1312, 1834
DdeI	CTNAG	4 cut(s)	399, 876, 2037, 2096
DinI	GGCGCC	1 cut(s)	148
DpnI	GATC	6 cut(s)	329, 460, 849, 954, 1875, 1908
DpnII	GATC	6 cut(s)	327, 458, 847, 952, 1873, 1906
DriI	GACNNNNNGTC	1 cut(s)	1258
EaeI	YGGCCR	5 cut(s)	87, 105, 109, 166, 221
EagI	CGGCCG	1 cut(s)	105
Eam1104I	CTCTTC	7 cut(s)	189, 414, 621, 1615, 1752, 1953, 2048
Eam1105I	GACNNNNNGTC	1 cut(s)	1258
EarI	CTCTTC	7 cut(s)	189, 414, 621, 1615, 1752, 1953, 2048
EciI	GGCGGA	2 cut(s)	255, 276
Ecl136II	GAGCTC	1 cut(s)	2041
EclXI	CGGCCG	1 cut(s)	105
Eco130I	CCWWGG	3 cut(s)	552, 1200, 1263
Eco147I	AGGCCT	1 cut(s)	863
Eco24I	GRGCYC	2 cut(s)	684, 2043
Eco47I	GGWCC	4 cut(s)	427, 1402, 1798, 2100
Eco52I	CGGCCG	1 cut(s)	105
Eco53kI	GAGCTC	1 cut(s)	2041
Eco57I	CTGAAG	3 cut(s)	982, 1409, 1989
EcoICRI	GAGCTC	1 cut(s)	2041
EcoO109I	RGGNCCY	1 cut(s)	1859
EcoRII	CCWGG	3 cut(s)	1445, 1861, 1992
EcoT14I	CCWWGG	3 cut(s)	552, 1200, 1263
EcoT22I	ATGCAT	1 cut(s)	1660
EcoT38I	GRGCYC	2 cut(s)	684, 2043
EgeI	GGCGCC	1 cut(s)	148
EheI	GGCGCC	1 cut(s)	148
ErhI	CCWWGG	3 cut(s)	552, 1200, 1263
FalI	AAGNNNNNCTT	2 cut(s)	1110, 1142
FaqI	GGGAC	2 cut(s)	581, 1617
FauI	CCCGC	1 cut(s)	330
FbaI	TGATCA	2 cut(s)	847, 952
FokI	GGATG	7 cut(s)	385, 683, 689, 811, 1313, 1526, 1699
FriOI	GRGCYC	2 cut(s)	684, 2043
FseI	GGCCGGCC	1 cut(s)	111
FspAI	RTGCGCAY	1 cut(s)	1371
FspBI	CTAG	3 cut(s)	384, 1188, 1331
FspI	TGCGCA	1 cut(s)	1371
GlaI	GCGC	7 cut(s)	10, 12, 148, 335, 337, 478, 1371
GsaI	CCCAGC	1 cut(s)	321
GsuI	CTGGAG	1 cut(s)	726
HaeII	RGCGCY	1 cut(s)	150
HaeIII	GGCC	9 cut(s)	89, 107, 111, 131, 168, 223, 863, 902, 1861
HgaI	GACGC	3 cut(s)	520, 1346, 1619
HhaI	GCGC	7 cut(s)	11, 13, 149, 336, 338, 479, 1372
Hin1I	GRCGYC	2 cut(s)	147, 512
Hin6I	GCGC	7 cut(s)	9, 11, 147, 334, 336, 477, 1370
HinP1I	GCGC	7 cut(s)	9, 11, 147, 334, 336, 477, 1370
HincII	GTYRAC	1 cut(s)	1252
HindII	GTYRAC	1 cut(s)	1252
HindIII	AAGCTT	3 cut(s)	1514, 1679, 2118
HphI	GGTGA	8 cut(s)	635, 647, 674, 727, 814, 1028, 1877, 1967
Hpy166II	GTNNAC	1 cut(s)	1252
Hpy8I	GTNNAC	1 cut(s)	1252
Hpy99I	CGWCG	2 cut(s)	355, 493
HpyAV	CCTTC	6 cut(s)	109, 517, 614, 1006, 1126, 1789
HpyCH4III	ACNGT	2 cut(s)	1066, 1276
HpyCH4IV	ACGT	1 cut(s)	123
HpyF3I	CTNAG	4 cut(s)	399, 876, 2037, 2096
HpySE526I	ACGT	1 cut(s)	123
Hsp92I	GRCGYC	2 cut(s)	147, 512
HspAI	GCGC	7 cut(s)	9, 11, 147, 334, 336, 477, 1370
KasI	GGCGCC	1 cut(s)	146
KpnI	GGTACC	1 cut(s)	1837
KroI	GCCGGC	1 cut(s)	107
KroNI	GCCGGC	1 cut(s)	109
Ksp22I	TGATCA	2 cut(s)	847, 952
Kzo9I	GATC	6 cut(s)	327, 458, 847, 952, 1873, 1906
LguI	GCTCTTC	2 cut(s)	189, 2048
LmnI	GCTCC	4 cut(s)	55, 1022, 1123, 1774
Lsp1109I	GCAGC	4 cut(s)	1229, 1318, 1602, 1861
LweI	GCATC	7 cut(s)	38, 363, 795, 882, 1381, 1882, 2071
MaeI	CTAG	3 cut(s)	384, 1188, 1331
MaeII	ACGT	1 cut(s)	123
MaeIII	GTNAC	4 cut(s)	745, 1226, 2007, 2129
MalI	GATC	6 cut(s)	329, 460, 849, 954, 1875, 1908
MbiI	CCGCTC	2 cut(s)	58, 271
MboI	GATC	6 cut(s)	327, 458, 847, 952, 1873, 1906
MfeI	CAATTG	1 cut(s)	759
MflI	RGATCY	1 cut(s)	1906
MhlI	GDGCHC	4 cut(s)	603, 684, 877, 2043
MlsI	TGGCCA	1 cut(s)	89
MluCI	AATT	5 cut(s)	759, 925, 1505, 1638, 1925
MluNI	TGGCCA	1 cut(s)	89
Mly113I	GGCGCC	1 cut(s)	147
MlyI	GAGTC	5 cut(s)	557, 742, 975, 1262, 2026
MmeI	TCCRAC	1 cut(s)	1513
Mox20I	TGGCCA	1 cut(s)	89
Mph1103I	ATGCAT	1 cut(s)	1660
MroNI	GCCGGC	1 cut(s)	107
MroXI	GAANNNNTTC	1 cut(s)	1680
MscI	TGGCCA	1 cut(s)	89
MseI	TTAA	4 cut(s)	155, 857, 1479, 1595
MslI	CAYNNNNRTG	3 cut(s)	1455, 2073, 2108
Msp20I	TGGCCA	1 cut(s)	89
MspA1I	CMGCKG	4 cut(s)	184, 220, 1309, 1387
MspCI	CTTAAG	1 cut(s)	154
MspR9I	CCNGG	6 cut(s)	597, 692, 810, 1447, 1863, 1994
MunI	CAATTG	1 cut(s)	759
Mva1269I	GAATGC	2 cut(s)	766, 1498
MvaI	CCWGG	3 cut(s)	1447, 1863, 1994
MvnI	CGCG	5 cut(s)	11, 104, 336, 479, 1340
NaeI	GCCGGC	1 cut(s)	109
NarI	GGCGCC	1 cut(s)	147
NciI	CCSGG	3 cut(s)	597, 692, 810
NcoI	CCATGG	1 cut(s)	1263
NdeII	GATC	6 cut(s)	327, 458, 847, 952, 1873, 1906
NgoMIV	GCCGGC	1 cut(s)	107
NlaIV	GGNNCC	8 cut(s)	65, 148, 496, 531, 1451, 1835, 1860, 1908
NmuCI	GTSAC	3 cut(s)	745, 1226, 2007
NsbI	TGCGCA	1 cut(s)	1371
NsiI	ATGCAT	1 cut(s)	1660
NspI	RCATGY	4 cut(s)	595, 1258, 1807, 2076
NspV	TTCGAA	1 cut(s)	770
OliI	CACNNNNGTG	1 cut(s)	2073
PagI	TCATGA	1 cut(s)	1375
PauI	GCGCGC	2 cut(s)	9, 334
PceI	AGGCCT	1 cut(s)	863
PciI	ACATGT	1 cut(s)	2072
PciSI	GCTCTTC	2 cut(s)	189, 2048
PcsI	WCGNNNNNNNCGW	1 cut(s)	970
PctI	GAATGC	2 cut(s)	766, 1498
PdiI	GCCGGC	1 cut(s)	109
PdmI	GAANNNNTTC	1 cut(s)	1680
PleI	GAGTC	5 cut(s)	556, 742, 974, 1262, 2025
PluTI	GGCGCC	1 cut(s)	150
PpsI	GAGTC	5 cut(s)	556, 742, 974, 1262, 2025
PscI	ACATGT	1 cut(s)	2072
PshAI	GACNNNNGTC	1 cut(s)	356
Psp124BI	GAGCTC	1 cut(s)	2043
Psp6I	CCWGG	3 cut(s)	1445, 1861, 1992
PspFI	CCCAGC	1 cut(s)	317
PspGI	CCWGG	3 cut(s)	1445, 1861, 1992
PspN4I	GGNNCC	8 cut(s)	65, 148, 496, 531, 1451, 1835, 1860, 1908
PspPI	GGNCC	5 cut(s)	427, 1402, 1798, 1859, 2100
PsuI	RGATCY	1 cut(s)	1906
PteI	GCGCGC	2 cut(s)	9, 334
PvuII	CAGCTG	2 cut(s)	1309, 1387
RigI	GGCCGGCC	1 cut(s)	111
RsaI	GTAC	2 cut(s)	1313, 1835
RsaNI	GTAC	2 cut(s)	1312, 1834
RseI	CAYNNNNRTG	3 cut(s)	1455, 2073, 2108
SacI	GAGCTC	1 cut(s)	2043
SapI	GCTCTTC	2 cut(s)	189, 2048
SaqAI	TTAA	4 cut(s)	155, 857, 1479, 1595
Sau3AI	GATC	6 cut(s)	327, 458, 847, 952, 1873, 1906
Sau96I	GGNCC	5 cut(s)	427, 1402, 1798, 1859, 2100
SchI	GAGTC	5 cut(s)	557, 742, 975, 1262, 2026
ScrFI	CCNGG	6 cut(s)	597, 692, 810, 1447, 1863, 1994
SduI	GDGCHC	4 cut(s)	603, 684, 877, 2043
SfaNI	GCATC	7 cut(s)	38, 363, 795, 882, 1381, 1882, 2071
SfcI	CTRYAG	1 cut(s)	1272
SfoI	GGCGCC	1 cut(s)	148
SfuI	TTCGAA	1 cut(s)	770
SgrAI	CRCCGGYG	1 cut(s)	143
SinI	GGWCC	4 cut(s)	427, 1402, 1798, 2100
SmiMI	CAYNNNNRTG	3 cut(s)	1455, 2073, 2108
SmlI	CTYRAG	3 cut(s)	154, 607, 896
SmoI	CTYRAG	3 cut(s)	154, 607, 896
Sse9I	AATT	5 cut(s)	759, 925, 1505, 1638, 1925
SseBI	AGGCCT	1 cut(s)	863
SspDI	GGCGCC	1 cut(s)	146
SspI	AATATT	1 cut(s)	831
SspMI	CTAG	3 cut(s)	384, 1188, 1331
SstI	GAGCTC	1 cut(s)	2043
StuI	AGGCCT	1 cut(s)	863
StyD4I	CCNGG	6 cut(s)	595, 690, 808, 1445, 1861, 1992
StyI	CCWWGG	3 cut(s)	552, 1200, 1263
TaaI	ACNGT	2 cut(s)	1066, 1276
TaiI	ACGT	1 cut(s)	126
TasI	AATT	5 cut(s)	759, 925, 1505, 1638, 1925
Tru1I	TTAA	4 cut(s)	155, 857, 1479, 1595
Tru9I	TTAA	4 cut(s)	155, 857, 1479, 1595
TscAI	CASTG	3 cut(s)	750, 1069, 1471
TseFI	GTSAC	3 cut(s)	745, 1226, 2007
TseI	GCWGC	4 cut(s)	1217, 1306, 1590, 1849
Tsp45I	GTSAC	3 cut(s)	745, 1226, 2007
TspGWI	ACGGA	4 cut(s)	186, 368, 2036, 2103
TspRI	CASTG	3 cut(s)	750, 1069, 1471
Vha464I	CTTAAG	1 cut(s)	154
VpaK11BI	GGWCC	4 cut(s)	427, 1402, 1798, 2100
XapI	RAATTY	2 cut(s)	925, 1505
XceI	RCATGY	4 cut(s)	595, 1258, 1807, 2076
XmnI	GAANNNNTTC	1 cut(s)	1680
XspI	CTAG	3 cut(s)	384, 1188, 1331
Zsp2I	ATGCAT	1 cut(s)	1660

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.