Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0008273

Physical Location & Seq

Genomic Coordinates Reverse (-)

9912132 .. 9915792

Gene Structure 3661 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00289250.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1629 bp

ATGGGGAGTTTGGAGATGGATCACAGCTCTGATGAGGATACAGATCTGAGTGACTCAGAATTGGATGAGGAGGTAGAACAATATCTCGAAGAGCTGAAGAATGGAAAACACAGGGTGAAAGGTGCGGATGGTGTATTTATGTGCCCCTTCTGCCAGAGGAAGAGAAAGCGGGATTTTAATTTAAAGGACCTGCTCCAACATGCGTCTGGGGTGGGAAAGAGTAATTCAGACAAGAGAAGCATGGAAGAGAAGGCGAAACACATGGCTTTGACAAAATATTTGGAAAATGTAGCTGAAGGTGGTTCATCAAAACCTGTGGCTGAGGAAAAACCCCCAGTCGATTGTGACCATGATGAAAAGTTTGTGTGGCCTTGGATAGGGGTGGTGGCTAATATCCCAACCAGACGAGCAAATGATGGGCGATTTGTAGGAGAAAGTGGATCCAAGCGGAGAGATGAGTATATAAGACAAGGGTTCAATCCTTCTAGAGTTCATCCTCTGTGGAATTATAGGGGTCACTCAGGAAGTGCTGTTGTGGAATTTAAGAAAGATTGGCCTGGCTACGTTAATGCTATGGCTTTTGAGAGGGCTTATGAGGCAGATCGTCATGGAAAAAAGGATTGGTTTGCTGATGGTGACCAAAAATCTGGTCTTTATGCTTGGGTTGCCCGCACTGACGACTATAAAGCAAACAATATTGTTGGAGAACACCTCCGTAAGATTGGGGACCTTAAATCTATTTCTGAAATTATGGAGGAAGAAGCCAGGAAGCAGAATAGCCTAGTATCTAATCTGACAAGTATTATTGAGGTCAAGAACAAGGATTTGGAAGAGATGGAGCTGAAATGTAATGAAACTACAAACACCATTAAGAACGTAATCACAGAGAAAGATAAGCTCGTACAGGCTTACAATGAAGCTGTACGGTACCTTAGTTTGGTAAAGACGTTTATTCTTACCATTCTGGTTTGGTATATTTCATTATCGTTTTCTAGTATTACAATGCTGAAGAGACATTCACTCATGGCGTGCTTGTTTGGGGTGACAGAGATAAAAAAGATACAAGTAAGTGCACAGGATCACTTTAAGAGGATTTTTAGTGACCACGAAAAACTCAAGGAGCAGTTGGAGTCCCAAAAGAAAGAGCTTGAGTCGCATATAGAAGAAATGGAGAAGCGTGCTCTGGATAACGAAAGTGAAAGTAGAAAGCTTGCTGAGGAGATTGAAAAGAATTCCGTGAAAAATAGTTCTCTCCAAATGGCTGCTGCAGAGCAAGTGAGAGCTAATGAAAAGTTATTGAAACTGGCAGAAGATCAGAAGAGGGAAAAGGAGGAGCTCCATAATAATATAATTAAACTGGAGAAGGACTTTGATGAAAAGCAAGCTCTTGAATTACAAATTGAGCAACTAAAAGGAAACTTAAATGTTGTAAGGCGCATGGGAGATGACGGTGATGCTGAAGTGCTGGAAAAGGTGGAAGGAATGCTGAAAGGTTTGAGTGAAAAGGAAAATGAACTTGAAGATCTAGAAGCTTTAAATCAAACTCTAATTGTAAAGGAGCGAAAGAGCAATGATGAGCTGCAGGAAGCTCGTAAGGAATTGATTAATGTAAGTAGTTTATATGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000018 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005655 GO:0005730 GO:0006139 GO:0006259 GO:0006282 GO:0006304 GO:0006305 GO:0006306 GO:0006325 GO:0006342 GO:0006355 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010035 GO:0010038 GO:0010468 GO:0010556 GO:0010558 GO:0010569 GO:0010605 GO:0010629 GO:0016043 GO:0016070 GO:0016458 GO:0019219 GO:0019222 GO:0030677 GO:0030681 GO:0031047 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032259 GO:0032991 GO:0034641 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0044728 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0046686 GO:0048519 GO:0048523 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0080134 GO:0080135 GO:0080188 GO:0090304 GO:1901360 GO:1902494 GO:1902555 GO:1902679 GO:1903506 GO:1903507 GO:1905348 GO:1990904 GO:2000112 GO:2000113 GO:2000779 GO:2001020 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

XH XS zf-XS

Protein Analysis

542

Amino Acids

62.28

Weight (kDa)

5.47

Isoelectric Point (pI)

43.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-XS	PF03470	48 - 90	8.1e-19	XS zinc finger domain
XS	PF03468	118 - 229	4e-38	XS domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008273)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48670 AT3G48670 AT3G48670 AT4G01780
fragaria_vesca	FvH4_7g22690 FvH4_7g22690
malus_domestica	MD01G1135500.v1.1 MD07G1200200.v1.1
prunus_persica	Prupe.2G236900_v2.0.a1 Prupe.2G236900_v2.0.a1
pyrus_communis	pycom01g15620 pycom07g18700
rosa_chinensis	RchiOBHm_Chr1g0367771
rosa_laevigata	RLG00000027264
rosa_multiflora	Rmu_ssc0000395.1_g000021
rosa_roxburghii	Rroxscaffold_4G00289230 Rroxscaffold_4G00289250
rosa_rugosa	Rorug01G0336500
rosa_samantha	Rh1AG343700 Rh1BG305600 Rh1CG321200 Rh1DG337800
rosa_wichuraiana	Rw1G030590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	198
Acc65I	GGTACC	1 cut(s)	927
AccB1I	GGYRCC	1 cut(s)	927
AciI	CCGC	4 cut(s)	125, 169, 448, 670
AclWI	GGATC	4 cut(s)	27, 435, 448, 1086
AcsI	RAATTY	2 cut(s)	539, 1231
AcuI	CTGAAG	4 cut(s)	116, 315, 1028, 1479
AdeI	CACNNNGTG	1 cut(s)	115
AfaI	GTAC	3 cut(s)	903, 924, 929
AfiI	CCNNNNNNNGG	2 cut(s)	377, 937
AgsI	TTSAA	5 cut(s)	478, 1226, 1300, 1391, 1520
AjnI	CCWGG	2 cut(s)	556, 764
AjuI	GAANNNNNNNTTGG	4 cut(s)	604, 636, 809, 841
Alw21I	GWGCWC	3 cut(s)	1075, 1183, 1338
Alw26I	GTCTC	1 cut(s)	1006
Alw44I	GTGCAC	1 cut(s)	1071
AlwI	GGATC	4 cut(s)	27, 435, 448, 1086
AoxI	GGCC	2 cut(s)	368, 554
ApaLI	GTGCAC	1 cut(s)	1071
ApeKI	GCWGC	3 cut(s)	1262, 1265, 1579
ApoI	RAATTY	2 cut(s)	539, 1231
ArsI	GACNNNNNNTTYG	4 cut(s)	262, 294, 634, 666
AseI	ATTAAT	1 cut(s)	1605
Asp718I	GGTACC	1 cut(s)	927
AspLEI	GCGC	1 cut(s)	1437
AspS9I	GGNCC	2 cut(s)	187, 727
AsuHPI	GGTGA	4 cut(s)	127, 647, 1054, 1463
AvaII	GGWCC	2 cut(s)	187, 727
BaeGI	GKGCMC	2 cut(s)	146, 1075
BaeI	ACNNNNGTAYC	2 cut(s)	919, 952
BamHI	GGATCC	1 cut(s)	440
BanI	GGYRCC	1 cut(s)	927
BanII	GRGCYC	1 cut(s)	1338
Bbv12I	GWGCWC	3 cut(s)	1075, 1183, 1338
BbvCI	CCTCAGC	2 cut(s)	321, 1215
BbvI	GCAGC	3 cut(s)	1249, 1252, 1566
BccI	CCATC	5 cut(s)	10, 122, 410, 626, 829
BcgI	CGANNNNNNTGC	2 cut(s)	1571, 1605
BciT130I	CCWGG	2 cut(s)	558, 766
BciVI	GTATCC	1 cut(s)	31
BcoDI	GTCTC	1 cut(s)	1006
BfaI	CTAG	4 cut(s)	486, 782, 993, 1526
BfmI	CTRYAG	2 cut(s)	1266, 1580
BfuAI	ACCTGC	1 cut(s)	198
BfuI	GTATCC	1 cut(s)	31
BglII	AGATCT	2 cut(s)	43, 1522
BisI	GCNGC	3 cut(s)	1263, 1266, 1580
BlsI	GCNGC	3 cut(s)	1264, 1267, 1581
Bme1390I	CCNGG	2 cut(s)	558, 766
Bme18I	GGWCC	2 cut(s)	187, 727
BmgT120I	GGNCC	2 cut(s)	187, 727
BmiI	GGNNCC	3 cut(s)	442, 728, 929
BmrFI	CCNGG	2 cut(s)	558, 766
BmrI	ACTGGG	1 cut(s)	329
BmsI	GCATC	1 cut(s)	1444
BmuI	ACTGGG	1 cut(s)	329
BplI	GAGNNNNNCTC	2 cut(s)	696, 728
BpmI	CTGGAG	1 cut(s)	1379
Bpu10I	CCTNAGC	2 cut(s)	321, 1215
BpuEI	CTTGAG	2 cut(s)	1100, 1169
BsaBI	GATNNNNATC	1 cut(s)	42
BsaJI	CCNNGG	1 cut(s)	371
Bsc4I	CCNNNNNNNGG	2 cut(s)	377, 937
Bse1I	ACTGG	3 cut(s)	335, 1308, 1362
Bse3DI	GCAATG	1 cut(s)	1576
Bse8I	GATNNNNATC	1 cut(s)	42
BseBI	CCWGG	2 cut(s)	558, 766
BseDI	CCNNGG	1 cut(s)	371
BseGI	GGATG	3 cut(s)	70, 133, 493
BseJI	GATNNNNATC	1 cut(s)	42
BseLI	CCNNNNNNNGG	2 cut(s)	377, 937
BseMI	GCAATG	1 cut(s)	1576
BseMII	CTCAG	5 cut(s)	38, 69, 312, 534, 1206
BseNI	ACTGG	3 cut(s)	335, 1308, 1362
BseRI	GAGGAG	3 cut(s)	83, 1232, 1346
BseSI	GKGCMC	2 cut(s)	146, 1075
BseXI	GCAGC	3 cut(s)	1249, 1252, 1566
BshFI	GGCC	2 cut(s)	370, 556
BshNI	GGYRCC	1 cut(s)	927
BsiHKAI	GWGCWC	3 cut(s)	1075, 1183, 1338
BslFI	GGGAC	2 cut(s)	740, 1117
BslI	CCNNNNNNNGG	2 cut(s)	377, 937
BsmAI	GTCTC	1 cut(s)	1006
BsmFI	GGGAC	2 cut(s)	740, 1117
BsmI	GAATGC	1 cut(s)	1488
BsnI	GGCC	2 cut(s)	370, 556
Bsp1286I	GDGCHC	4 cut(s)	146, 1075, 1183, 1338
Bsp143I	GATC	7 cut(s)	19, 43, 440, 601, 1078, 1312, 1522
BspACI	CCGC	4 cut(s)	125, 169, 448, 670
BspANI	GGCC	2 cut(s)	370, 556
BspCNI	CTCAG	5 cut(s)	39, 68, 313, 533, 1207
BspLI	GGNNCC	3 cut(s)	442, 728, 929
BspMAI	CTGCAG	2 cut(s)	1270, 1584
BspMI	ACCTGC	1 cut(s)	198
BspPI	GGATC	4 cut(s)	27, 435, 448, 1086
BspQI	GCTCTTC	1 cut(s)	84
BspT107I	GGYRCC	1 cut(s)	927
BsrDI	GCAATG	1 cut(s)	1576
BsrI	ACTGG	3 cut(s)	335, 1308, 1362
BssECI	CCNNGG	1 cut(s)	371
BssMI	GATC	7 cut(s)	19, 43, 440, 601, 1078, 1312, 1522
BssT1I	CCWWGG	1 cut(s)	371
Bst2UI	CCWGG	2 cut(s)	558, 766
Bst4CI	ACNGT	2 cut(s)	927, 1451
Bst6I	CTCTTC	6 cut(s)	84, 155, 240, 825, 1004, 1313
BstC8I	GCNNGC	5 cut(s)	670, 1030, 1179, 1212, 1383
BstDEI	CTNAG	6 cut(s)	47, 55, 321, 520, 932, 1215
BstEII	GGTNACC	1 cut(s)	635
BstENI	CCTNNNNNAGG	1 cut(s)	375
BstF5I	GGATG	3 cut(s)	70, 133, 493
BstHHI	GCGC	1 cut(s)	1437
BstKTI	GATC	7 cut(s)	22, 46, 443, 604, 1081, 1315, 1525
BstMAI	GTCTC	1 cut(s)	1006
BstMBI	GATC	7 cut(s)	19, 43, 440, 601, 1078, 1312, 1522
BstMWI	GCNNNNNNNGC	4 cut(s)	150, 596, 665, 1153
BstNI	CCWGG	2 cut(s)	558, 766
BstNSI	RCATGY	1 cut(s)	203
BstPI	GGTNACC	1 cut(s)	635
BstSCI	CCNGG	2 cut(s)	556, 764
BstSFI	CTRYAG	2 cut(s)	1266, 1580
BstSLI	GKGCMC	2 cut(s)	146, 1075
BstV1I	GCAGC	3 cut(s)	1249, 1252, 1566
BstX2I	RGATCY	3 cut(s)	43, 440, 1522
BstXI	CCANNNNNNTGG	1 cut(s)	647
BstYI	RGATCY	3 cut(s)	43, 440, 1522
BsuI	GTATCC	1 cut(s)	31
BsuRI	GGCC	2 cut(s)	370, 556
BtsCI	GGATG	3 cut(s)	70, 133, 493
BtsIMutI	CAGTG	1 cut(s)	672
BveI	ACCTGC	1 cut(s)	198
Cac8I	GCNNGC	5 cut(s)	670, 1030, 1179, 1212, 1383
CfoI	GCGC	1 cut(s)	1437
Cfr13I	GGNCC	2 cut(s)	187, 727
CseI	GACGC	1 cut(s)	192
Csp6I	GTAC	3 cut(s)	902, 923, 928
CspCI	CAANNNNNGTGG	2 cut(s)	297, 332
CviAII	CATG	7 cut(s)	200, 241, 262, 350, 608, 1024, 1438
CviQI	GTAC	3 cut(s)	902, 923, 928
DdeI	CTNAG	6 cut(s)	47, 55, 321, 520, 932, 1215
DpnI	GATC	7 cut(s)	21, 45, 442, 603, 1080, 1314, 1524
DpnII	GATC	7 cut(s)	19, 43, 440, 601, 1078, 1312, 1522
DraI	TTTAAA	2 cut(s)	183, 1536
DraIII	CACNNNGTG	1 cut(s)	115
Eam1104I	CTCTTC	6 cut(s)	84, 155, 240, 825, 1004, 1313
EarI	CTCTTC	6 cut(s)	84, 155, 240, 825, 1004, 1313
Ecl136II	GAGCTC	1 cut(s)	1336
Eco130I	CCWWGG	1 cut(s)	371
Eco24I	GRGCYC	1 cut(s)	1338
Eco47I	GGWCC	2 cut(s)	187, 727
Eco53kI	GAGCTC	1 cut(s)	1336
Eco57I	CTGAAG	4 cut(s)	116, 315, 1028, 1479
Eco91I	GGTNACC	1 cut(s)	635
EcoICRI	GAGCTC	1 cut(s)	1336
EcoNI	CCTNNNNNAGG	1 cut(s)	375
EcoO109I	RGGNCCY	2 cut(s)	187, 727
EcoO65I	GGTNACC	1 cut(s)	635
EcoRI	GAATTC	1 cut(s)	1231
EcoRII	CCWGG	2 cut(s)	556, 764
EcoT14I	CCWWGG	1 cut(s)	371
EcoT22I	ATGCAT	1 cut(s)	1627
EcoT38I	GRGCYC	1 cut(s)	1338
ErhI	CCWWGG	1 cut(s)	371
FaeI	CATG	7 cut(s)	203, 244, 265, 353, 611, 1027, 1441
FaqI	GGGAC	2 cut(s)	740, 1117
FatI	CATG	7 cut(s)	199, 240, 261, 349, 607, 1023, 1437
FauI	CCCGC	2 cut(s)	162, 677
Fnu4HI	GCNGC	3 cut(s)	1263, 1266, 1580
FokI	GGATG	3 cut(s)	77, 140, 480
FriOI	GRGCYC	1 cut(s)	1338
Fsp4HI	GCNGC	3 cut(s)	1263, 1266, 1580
FspBI	CTAG	4 cut(s)	486, 782, 993, 1526
GlaI	GCGC	1 cut(s)	1436
GluI	GCNGC	3 cut(s)	1263, 1266, 1580
GsuI	CTGGAG	1 cut(s)	1379
HaeIII	GGCC	2 cut(s)	370, 556
HgaI	GACGC	1 cut(s)	192
HhaI	GCGC	1 cut(s)	1437
Hin1II	CATG	7 cut(s)	203, 244, 265, 353, 611, 1027, 1441
Hin6I	GCGC	1 cut(s)	1435
HinP1I	GCGC	1 cut(s)	1435
HindIII	AAGCTT	2 cut(s)	1208, 1530
HinfI	GANTC	3 cut(s)	53, 1130, 1151
HphI	GGTGA	4 cut(s)	127, 647, 1054, 1463
Hpy166II	GTNNAC	1 cut(s)	1073
Hpy188I	TCNGA	7 cut(s)	31, 48, 58, 229, 745, 795, 1317
Hpy188III	TCNNGA	7 cut(s)	86, 486, 522, 814, 1184, 1388, 1526
Hpy8I	GTNNAC	1 cut(s)	1073
HpyAV	CCTTC	6 cut(s)	157, 244, 290, 492, 1357, 1472
HpyCH4III	ACNGT	2 cut(s)	927, 1451
HpyCH4IV	ACGT	3 cut(s)	564, 876, 947
HpyCH4V	TGCA	4 cut(s)	1073, 1268, 1582, 1625
HpyF10VI	GCNNNNNNNGC	4 cut(s)	150, 596, 665, 1153
HpyF3I	CTNAG	6 cut(s)	47, 55, 321, 520, 932, 1215
HpySE526I	ACGT	3 cut(s)	564, 876, 947
Hsp92II	CATG	7 cut(s)	203, 244, 265, 353, 611, 1027, 1441
HspAI	GCGC	1 cut(s)	1435
KpnI	GGTACC	1 cut(s)	931
Kzo9I	GATC	7 cut(s)	19, 43, 440, 601, 1078, 1312, 1522
LguI	GCTCTTC	1 cut(s)	84
LmnI	GCTCC	6 cut(s)	198, 838, 1120, 1333, 1341, 1558
Lsp1109I	GCAGC	3 cut(s)	1249, 1252, 1566
LweI	GCATC	1 cut(s)	1444
MaeI	CTAG	4 cut(s)	486, 782, 993, 1526
MaeII	ACGT	3 cut(s)	564, 876, 947
MaeIII	GTNAC	6 cut(s)	50, 344, 515, 635, 1042, 1100
MalI	GATC	7 cut(s)	21, 45, 442, 603, 1080, 1314, 1524
MboI	GATC	7 cut(s)	19, 43, 440, 601, 1078, 1312, 1522
MflI	RGATCY	3 cut(s)	43, 440, 1522
MhlI	GDGCHC	4 cut(s)	146, 1075, 1183, 1338
MlyI	GAGTC	3 cut(s)	47, 1139, 1160
MmeI	TCCRAC	3 cut(s)	220, 682, 1107
Mph1103I	ATGCAT	1 cut(s)	1627
MspR9I	CCNGG	2 cut(s)	558, 766
Mva1269I	GAATGC	1 cut(s)	1488
MvaI	CCWGG	2 cut(s)	558, 766
MwoI	GCNNNNNNNGC	4 cut(s)	150, 596, 665, 1153
NdeII	GATC	7 cut(s)	19, 43, 440, 601, 1078, 1312, 1522
NlaIII	CATG	7 cut(s)	203, 244, 265, 353, 611, 1027, 1441
NlaIV	GGNNCC	3 cut(s)	442, 728, 929
NmuCI	GTSAC	6 cut(s)	50, 344, 515, 635, 1042, 1100
NsiI	ATGCAT	1 cut(s)	1627
NspI	RCATGY	1 cut(s)	203
PciSI	GCTCTTC	1 cut(s)	84
PctI	GAATGC	1 cut(s)	1488
PkrI	GCNGC	3 cut(s)	1264, 1267, 1581
PleI	GAGTC	3 cut(s)	47, 1138, 1159
PpsI	GAGTC	3 cut(s)	47, 1138, 1159
PpuMI	RGGWCCY	2 cut(s)	187, 727
PshBI	ATTAAT	1 cut(s)	1605
Psp124BI	GAGCTC	1 cut(s)	1338
Psp5II	RGGWCCY	2 cut(s)	187, 727
Psp6I	CCWGG	2 cut(s)	556, 764
PspEI	GGTNACC	1 cut(s)	635
PspGI	CCWGG	2 cut(s)	556, 764
PspN4I	GGNNCC	3 cut(s)	442, 728, 929
PspPI	GGNCC	2 cut(s)	187, 727
PspPPI	RGGWCCY	2 cut(s)	187, 727
PstI	CTGCAG	2 cut(s)	1270, 1584
PsuI	RGATCY	3 cut(s)	43, 440, 1522
RsaI	GTAC	3 cut(s)	903, 924, 929
RsaNI	GTAC	3 cut(s)	902, 923, 928
SacI	GAGCTC	1 cut(s)	1338
SapI	GCTCTTC	1 cut(s)	84
SatI	GCNGC	3 cut(s)	1263, 1266, 1580
Sau3AI	GATC	7 cut(s)	19, 43, 440, 601, 1078, 1312, 1522
Sau96I	GGNCC	2 cut(s)	187, 727
SchI	GAGTC	3 cut(s)	47, 1139, 1160
ScrFI	CCNGG	2 cut(s)	558, 766
SduI	GDGCHC	4 cut(s)	146, 1075, 1183, 1338
SfaNI	GCATC	1 cut(s)	1444
SfcI	CTRYAG	2 cut(s)	1266, 1580
SinI	GGWCC	2 cut(s)	187, 727
SmlI	CTYRAG	2 cut(s)	1115, 1148
SmoI	CTYRAG	2 cut(s)	1115, 1148
SsiI	CCGC	4 cut(s)	125, 169, 448, 670
SspI	AATATT	2 cut(s)	278, 697
SspMI	CTAG	4 cut(s)	486, 782, 993, 1526
SstI	GAGCTC	1 cut(s)	1338
StyD4I	CCNGG	2 cut(s)	556, 764
StyI	CCWWGG	1 cut(s)	371
TaaI	ACNGT	2 cut(s)	927, 1451
TaiI	ACGT	3 cut(s)	567, 879, 950
TaqI	TCGA	2 cut(s)	87, 339
TscAI	CASTG	1 cut(s)	679
TseFI	GTSAC	6 cut(s)	50, 344, 515, 635, 1042, 1100
TseI	GCWGC	3 cut(s)	1262, 1265, 1579
Tsp45I	GTSAC	6 cut(s)	50, 344, 515, 635, 1042, 1100
TspDTI	ATGAA	9 cut(s)	294, 369, 482, 867, 930, 969, 1302, 1389, 1527
TspGWI	ACGGA	2 cut(s)	704, 1225
TspRI	CASTG	1 cut(s)	679
VneI	GTGCAC	1 cut(s)	1071
VpaK11BI	GGWCC	2 cut(s)	187, 727
VspI	ATTAAT	1 cut(s)	1605
XagI	CCTNNNNNAGG	1 cut(s)	375
XapI	RAATTY	2 cut(s)	539, 1231
XbaI	TCTAGA	2 cut(s)	485, 1525
XceI	RCATGY	1 cut(s)	203
XcmI	CCANNNNNNNNNTGG	1 cut(s)	203
XspI	CTAG	4 cut(s)	486, 782, 993, 1526
Zsp2I	ATGCAT	1 cut(s)	1627

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.