Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0008273

Physical Location & Seq

Genomic Coordinates Forward (+)

58480607 .. 58486351

Gene Structure 5745 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G030590.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1938 bp

ATGGGGAGTTTGGAGATGGATCATAGCTCTGACGAGGATACAGATCTGAGTGACTCAGAATTGGATGAGGAGGTAGAACAATATCTCGAAGAGCTGAAGAATGGAAAACACAAGGTGAAAGGTGCGGATGGGGTATTTATGTGCCCCTTCTGTCAGAAGAAGAGAAAGCGGGATTTTAATTTAAAGGACCTGCTCCAACATGCCTCTGGGGTGGGAAAGAGTAATTCAGACAAGAGAAGCATGGAAGAGAAGGTGAAACACATGGCTTTGACAAAATATTTGGAAAATGTAGCTGAAGGTGGTTCATCAAAACCTGTGGCTGAGGAAGAACCCCCAGTCGATTGTGACCATGATGAAAAGTTTGTGTGGCCTTGGATAGGGGTAGTGGCTAATATCCCAACCAGACGAGCAAATGATGGGCGATTCGTAGGAGAAAGTGGATCCAAGCTGAGAGATGAGTATATAAGACAAGGGTTCAATCCCTCTAGAGTTCATCCTCTGTGGAATTATAGGGGTCACTCAGGAAGTGCTGTTGTGGAATTTAAGAAAGATTGGCCTGGCTATGTTAATGCTATGGCTTTTGAGAGGGCTTATGAGGCAGATCGTCATGGAAAAAAGGATTGGTTTGCTGATGGTGACCAAAAATCTGGTCTTTATGCTTGGGTTGCCCGCACTGACGACTATAAAGCAAACAATATTGTTGGAGAACATCTCCGTAAGATTGGGGACCTTAAATCTATTTCTGAAATTATGGAGGAAGAAGCCAGGAAGCAGAATAGCCTAGTATCTAATCTGACAAGTATTATTGAGGTCAAGAACAAGGATTTGGAAGAGATGGAGCTGAAATGTAATGAAACTACAAACGCCATTAAGAACGTAATCACAGAGAAAGATAAGCTCGTACAGGCTTACAATGAAGAGATAAAAAAGATACAAGTAAGTGCACAGGATCACTTTAAGAGGATTTTTAGTGACCACGAAAAACTCAAGGAGCAGTTGGAGTCCCAAAAGAAAGAGCTCGAGTCGCATATAGAAGAAATGGAGAAGCGTGCTCTGGATAACGAAAGTGAAAGTAGAAAGCTTGCTGAGGAGATTGAAAAGAATTCCGTGAAAAATAGTTCTCTCCAAATGGCTGCTGCAGAGCAAGTGAGAGCTAATGAAAAGTTATTGAAACTGGCAGAAGATCAGAAGAGGGAGAAGGAGGAGCTCCATAATAAAATAATTAAACTGGAGAAGGACTTTGATGAAAAGCAAGCTCTTGAATTACAAATTGAGCAACTAAAAGGAAACTTAAATGTTGTAAGGCGCATGGGAGATGACGGTGATGCTGAAGTGCTGGAAAAGGTGGAAGGAATGCTGAAAGGTTTGAGTGAAAAGGAAAATGAACTTGAAGATCTAGAAGCTTTAAATCAAACTCTAATTGTAAAGGAGCGAAAGAGCAATGATGAGCTGCAGGAAGCTCGTAAGGAACTGATTAATGGCTTGAAAGACATGGAAATGTCCAGTCGTGCTCAAATTGGTATTAAAAGAATGGGAGAGCTTGACAATAAGCCATTCCAAGAAGCAATGAGGAGAAAGTATAAGTATAATGTGGAAGAAGCTGAAGAGAAGGCCTCCGAGTTGTGCTCTCTATGGGAGGAGTACTTGAAGGATCCAGACTGGCATCCTTTCAATGTTGTTCCGGTAAAAGAGGGCCATAAGGAAGTTATAAATGAAGATGATGAGAAACTAAAACGTTTGAAGAAGGAATTGGGTGATGAAGCGTATAATGCTGTAACATCAGCTTTAATGGAGATAAATCAATACAACCCTAGCGGGAGGTATATAACTTCAGAATTGTGGCACTATGGTGTGGGACGAAAGGCTACGCTGAAAGAGGGAGCTGCATTTATTCTGAAGGAATTGAAACAAAAGAAACAGCGATTGGATATTGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000018 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005655 GO:0005730 GO:0006139 GO:0006259 GO:0006282 GO:0006304 GO:0006305 GO:0006306 GO:0006325 GO:0006342 GO:0006355 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010035 GO:0010038 GO:0010468 GO:0010556 GO:0010558 GO:0010569 GO:0010605 GO:0010629 GO:0016043 GO:0016070 GO:0016458 GO:0019219 GO:0019222 GO:0030677 GO:0030681 GO:0031047 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032259 GO:0032991 GO:0034641 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0044728 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0046686 GO:0048519 GO:0048523 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0080134 GO:0080135 GO:0080188 GO:0090304 GO:1901360 GO:1902494 GO:1902555 GO:1902679 GO:1903506 GO:1903507 GO:1905348 GO:1990904 GO:2000112 GO:2000113 GO:2000779 GO:2001020 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

XH XS zf-XS

Protein Analysis

645

Amino Acids

74.41

Weight (kDa)

5.32

Isoelectric Point (pI)

43.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-XS	PF03470	48 - 90	1e-17	XS zinc finger domain
XS	PF03468	118 - 229	1.1e-39	XS domain
XH	PF03469	509 - 641	1.8e-54	XH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008273)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48670 AT3G48670 AT3G48670 AT4G01780
fragaria_vesca	FvH4_7g22690 FvH4_7g22690
malus_domestica	MD01G1135500.v1.1 MD07G1200200.v1.1
prunus_persica	Prupe.2G236900_v2.0.a1 Prupe.2G236900_v2.0.a1
pyrus_communis	pycom01g15620 pycom07g18700
rosa_chinensis	RchiOBHm_Chr1g0367771
rosa_laevigata	RLG00000027264
rosa_multiflora	Rmu_ssc0000395.1_g000021
rosa_roxburghii	Rroxscaffold_4G00289230 Rroxscaffold_4G00289250
rosa_rugosa	Rorug01G0336500
rosa_samantha	Rh1AG343700 Rh1BG305600 Rh1CG321200 Rh1DG337800
rosa_wichuraiana	Rw1G030590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1709
Acc36I	ACCTGC	1 cut(s)	198
AciI	CCGC	4 cut(s)	125, 169, 670, 1815
AclI	AACGTT	1 cut(s)	1735
AclWI	GGATC	6 cut(s)	27, 435, 448, 957, 1646, 1659
AcsI	RAATTY	2 cut(s)	539, 1102
AcuI	CTGAAG	6 cut(s)	116, 315, 1350, 1623, 1815, 1916
AdeI	CACNNNGTG	1 cut(s)	115
AfaI	GTAC	2 cut(s)	903, 1643
AfiI	CCNNNNNNNGG	1 cut(s)	377
AjnI	CCWGG	2 cut(s)	556, 764
AjuI	GAANNNNNNNTTGG	7 cut(s)	604, 636, 809, 841, 1733, 1765, 1907
AleI	CACNNNNGTG	1 cut(s)	1848
Alw21I	GWGCWC	6 cut(s)	946, 1020, 1054, 1209, 1513, 1628
Alw44I	GTGCAC	1 cut(s)	942
AlwI	GGATC	6 cut(s)	27, 435, 448, 957, 1646, 1659
Ama87I	CYCGRG	1 cut(s)	1019
AoxI	GGCC	4 cut(s)	368, 554, 1611, 1693
ApaLI	GTGCAC	1 cut(s)	942
ApeKI	GCWGC	4 cut(s)	1133, 1136, 1450, 1883
ApoI	RAATTY	2 cut(s)	539, 1102
ArsI	GACNNNNNNTTYG	4 cut(s)	262, 294, 634, 666
AseI	ATTAAT	1 cut(s)	1476
AspLEI	GCGC	1 cut(s)	1308
AspS9I	GGNCC	3 cut(s)	187, 727, 1693
AsuHPI	GGTGA	5 cut(s)	127, 265, 647, 1334, 1766
AvaI	CYCGRG	1 cut(s)	1019
AvaII	GGWCC	2 cut(s)	187, 727
BaeGI	GKGCMC	2 cut(s)	146, 946
BamHI	GGATCC	2 cut(s)	440, 1651
BanII	GRGCYC	2 cut(s)	1020, 1209
Bbv12I	GWGCWC	6 cut(s)	946, 1020, 1054, 1209, 1513, 1628
BbvCI	CCTCAGC	2 cut(s)	321, 1086
BbvI	GCAGC	4 cut(s)	1120, 1123, 1437, 1870
BccI	CCATC	5 cut(s)	10, 122, 410, 626, 829
BcgI	CGANNNNNNTGC	2 cut(s)	1442, 1476
BciT130I	CCWGG	2 cut(s)	558, 766
BciVI	GTATCC	1 cut(s)	31
BfaI	CTAG	4 cut(s)	486, 782, 1397, 1812
BfmI	CTRYAG	2 cut(s)	1137, 1451
BfuAI	ACCTGC	1 cut(s)	198
BfuI	GTATCC	1 cut(s)	31
BglII	AGATCT	2 cut(s)	43, 1393
BisI	GCNGC	4 cut(s)	1134, 1137, 1451, 1884
BlsI	GCNGC	4 cut(s)	1135, 1138, 1452, 1885
BmcAI	AGTACT	1 cut(s)	1643
Bme1390I	CCNGG	2 cut(s)	558, 766
Bme18I	GGWCC	2 cut(s)	187, 727
BmeT110I	CYCGRG	1 cut(s)	1019
BmgT120I	GGNCC	3 cut(s)	187, 727, 1693
BmiI	GGNNCC	3 cut(s)	442, 728, 1653
BmrFI	CCNGG	2 cut(s)	558, 766
BmrI	ACTGGG	1 cut(s)	329
BmsI	GCATC	2 cut(s)	1315, 1672
BmuI	ACTGGG	1 cut(s)	329
BplI	GAGNNNNNCTC	6 cut(s)	696, 728, 1598, 1630, 1610, 1642
BpmI	CTGGAG	1 cut(s)	1250
Bpu10I	CCTNAGC	2 cut(s)	321, 1086
BpuEI	CTTGAG	1 cut(s)	971
BsaBI	GATNNNNATC	1 cut(s)	42
BsaJI	CCNNGG	1 cut(s)	371
BsaWI	WCCGGW	1 cut(s)	1681
Bsc4I	CCNNNNNNNGG	1 cut(s)	377
Bse1I	ACTGG	5 cut(s)	335, 1179, 1233, 1503, 1664
Bse3DI	GCAATG	2 cut(s)	1447, 1572
Bse8I	GATNNNNATC	1 cut(s)	42
BseBI	CCWGG	2 cut(s)	558, 766
BseDI	CCNNGG	1 cut(s)	371
BseGI	GGATG	4 cut(s)	70, 133, 493, 1663
BseJI	GATNNNNATC	1 cut(s)	42
BseLI	CCNNNNNNNGG	1 cut(s)	377
BseMI	GCAATG	2 cut(s)	1447, 1572
BseMII	CTCAG	6 cut(s)	38, 69, 312, 440, 534, 1077
BseNI	ACTGG	5 cut(s)	335, 1179, 1233, 1503, 1664
BseRI	GAGGAG	5 cut(s)	83, 1103, 1217, 1585, 1652
BseSI	GKGCMC	2 cut(s)	146, 946
BseXI	GCAGC	4 cut(s)	1120, 1123, 1437, 1870
BshFI	GGCC	4 cut(s)	370, 556, 1613, 1695
BsiHKAI	GWGCWC	6 cut(s)	946, 1020, 1054, 1209, 1513, 1628
BsiHKCI	CYCGRG	1 cut(s)	1019
BsiSI	CCGG	1 cut(s)	1682
BslFI	GGGAC	3 cut(s)	740, 988, 1869
BslI	CCNNNNNNNGG	1 cut(s)	377
BsmFI	GGGAC	3 cut(s)	740, 988, 1869
BsmI	GAATGC	1 cut(s)	1359
BsnI	GGCC	4 cut(s)	370, 556, 1613, 1695
BsoBI	CYCGRG	1 cut(s)	1019
Bsp1286I	GDGCHC	7 cut(s)	146, 946, 1020, 1054, 1209, 1513, 1628
Bsp143I	GATC	8 cut(s)	19, 43, 440, 601, 949, 1183, 1393, 1651
BspACI	CCGC	4 cut(s)	125, 169, 670, 1815
BspANI	GGCC	4 cut(s)	370, 556, 1613, 1695
BspCNI	CTCAG	6 cut(s)	39, 68, 313, 441, 533, 1078
BspLI	GGNNCC	3 cut(s)	442, 728, 1653
BspMAI	CTGCAG	2 cut(s)	1141, 1455
BspMI	ACCTGC	1 cut(s)	198
BspPI	GGATC	6 cut(s)	27, 435, 448, 957, 1646, 1659
BspQI	GCTCTTC	1 cut(s)	84
BsrDI	GCAATG	2 cut(s)	1447, 1572
BsrI	ACTGG	5 cut(s)	335, 1179, 1233, 1503, 1664
BssECI	CCNNGG	1 cut(s)	371
BssMI	GATC	8 cut(s)	19, 43, 440, 601, 949, 1183, 1393, 1651
BssT1I	CCWWGG	1 cut(s)	371
Bst2UI	CCWGG	2 cut(s)	558, 766
Bst4CI	ACNGT	1 cut(s)	1322
Bst6I	CTCTTC	7 cut(s)	84, 155, 240, 825, 912, 1184, 1599
BstC8I	GCNNGC	4 cut(s)	670, 1050, 1083, 1254
BstDEI	CTNAG	6 cut(s)	47, 55, 321, 449, 520, 1086
BstEII	GGTNACC	1 cut(s)	635
BstENI	CCTNNNNNAGG	1 cut(s)	375
BstF5I	GGATG	4 cut(s)	70, 133, 493, 1663
BstHHI	GCGC	1 cut(s)	1308
BstKTI	GATC	8 cut(s)	22, 46, 443, 604, 952, 1186, 1396, 1654
BstMBI	GATC	8 cut(s)	19, 43, 440, 601, 949, 1183, 1393, 1651
BstMWI	GCNNNNNNNGC	4 cut(s)	596, 665, 1024, 1769
BstNI	CCWGG	2 cut(s)	558, 766
BstNSI	RCATGY	1 cut(s)	203
BstPI	GGTNACC	1 cut(s)	635
BstSCI	CCNGG	2 cut(s)	556, 764
BstSFI	CTRYAG	2 cut(s)	1137, 1451
BstSLI	GKGCMC	2 cut(s)	146, 946
BstV1I	GCAGC	4 cut(s)	1120, 1123, 1437, 1870
BstX2I	RGATCY	4 cut(s)	43, 440, 1393, 1651
BstXI	CCANNNNNNTGG	1 cut(s)	647
BstYI	RGATCY	4 cut(s)	43, 440, 1393, 1651
BsuI	GTATCC	1 cut(s)	31
BsuRI	GGCC	4 cut(s)	370, 556, 1613, 1695
BtsCI	GGATG	4 cut(s)	70, 133, 493, 1663
BtsIMutI	CAGTG	1 cut(s)	672
BveI	ACCTGC	1 cut(s)	198
Cac8I	GCNNGC	4 cut(s)	670, 1050, 1083, 1254
CfoI	GCGC	1 cut(s)	1308
Cfr13I	GGNCC	3 cut(s)	187, 727, 1693
Csp6I	GTAC	2 cut(s)	902, 1642
CspCI	CAANNNNNGTGG	2 cut(s)	297, 332
CviAII	CATG	7 cut(s)	200, 241, 262, 350, 608, 1309, 1492
CviQI	GTAC	2 cut(s)	902, 1642
DdeI	CTNAG	6 cut(s)	47, 55, 321, 449, 520, 1086
DpnI	GATC	8 cut(s)	21, 45, 442, 603, 951, 1185, 1395, 1653
DpnII	GATC	8 cut(s)	19, 43, 440, 601, 949, 1183, 1393, 1651
DraI	TTTAAA	2 cut(s)	183, 1407
DraIII	CACNNNGTG	1 cut(s)	115
Eam1104I	CTCTTC	7 cut(s)	84, 155, 240, 825, 912, 1184, 1599
EarI	CTCTTC	7 cut(s)	84, 155, 240, 825, 912, 1184, 1599
Ecl136II	GAGCTC	2 cut(s)	1018, 1207
Eco130I	CCWWGG	1 cut(s)	371
Eco147I	AGGCCT	1 cut(s)	1613
Eco24I	GRGCYC	2 cut(s)	1020, 1209
Eco47I	GGWCC	2 cut(s)	187, 727
Eco53kI	GAGCTC	2 cut(s)	1018, 1207
Eco57I	CTGAAG	6 cut(s)	116, 315, 1350, 1623, 1815, 1916
Eco88I	CYCGRG	1 cut(s)	1019
Eco91I	GGTNACC	1 cut(s)	635
EcoICRI	GAGCTC	2 cut(s)	1018, 1207
EcoNI	CCTNNNNNAGG	1 cut(s)	375
EcoO109I	RGGNCCY	2 cut(s)	187, 727
EcoO65I	GGTNACC	1 cut(s)	635
EcoRI	GAATTC	1 cut(s)	1102
EcoRII	CCWGG	2 cut(s)	556, 764
EcoT14I	CCWWGG	1 cut(s)	371
EcoT38I	GRGCYC	2 cut(s)	1020, 1209
ErhI	CCWWGG	1 cut(s)	371
FaeI	CATG	7 cut(s)	203, 244, 265, 353, 611, 1312, 1495
FaqI	GGGAC	3 cut(s)	740, 988, 1869
FatI	CATG	7 cut(s)	199, 240, 261, 349, 607, 1308, 1491
FauI	CCCGC	3 cut(s)	162, 677, 1808
Fnu4HI	GCNGC	4 cut(s)	1134, 1137, 1451, 1884
FokI	GGATG	4 cut(s)	77, 140, 480, 1650
FriOI	GRGCYC	2 cut(s)	1020, 1209
Fsp4HI	GCNGC	4 cut(s)	1134, 1137, 1451, 1884
FspBI	CTAG	4 cut(s)	486, 782, 1397, 1812
GlaI	GCGC	1 cut(s)	1307
GluI	GCNGC	4 cut(s)	1134, 1137, 1451, 1884
GsuI	CTGGAG	1 cut(s)	1250
HaeIII	GGCC	4 cut(s)	370, 556, 1613, 1695
HapII	CCGG	1 cut(s)	1682
HhaI	GCGC	1 cut(s)	1308
Hin1II	CATG	7 cut(s)	203, 244, 265, 353, 611, 1312, 1495
Hin6I	GCGC	1 cut(s)	1306
HinP1I	GCGC	1 cut(s)	1306
HindIII	AAGCTT	2 cut(s)	1079, 1401
HinfI	GANTC	4 cut(s)	53, 423, 1001, 1022
HpaII	CCGG	1 cut(s)	1682
HphI	GGTGA	5 cut(s)	127, 265, 647, 1334, 1766
Hpy166II	GTNNAC	1 cut(s)	944
Hpy188III	TCNNGA	8 cut(s)	86, 486, 522, 814, 1055, 1259, 1397, 1655
Hpy8I	GTNNAC	1 cut(s)	944
HpyCH4III	ACNGT	1 cut(s)	1322
HpyCH4IV	ACGT	2 cut(s)	876, 1735
HpyCH4V	TGCA	4 cut(s)	944, 1139, 1453, 1886
HpyF10VI	GCNNNNNNNGC	4 cut(s)	596, 665, 1024, 1769
HpyF3I	CTNAG	6 cut(s)	47, 55, 321, 449, 520, 1086
HpySE526I	ACGT	2 cut(s)	876, 1735
Hsp92II	CATG	7 cut(s)	203, 244, 265, 353, 611, 1312, 1495
HspAI	GCGC	1 cut(s)	1306
Kzo9I	GATC	8 cut(s)	19, 43, 440, 601, 949, 1183, 1393, 1651
LguI	GCTCTTC	1 cut(s)	84
LmnI	GCTCC	7 cut(s)	198, 838, 991, 1204, 1212, 1429, 1880
Lsp1109I	GCAGC	4 cut(s)	1120, 1123, 1437, 1870
LweI	GCATC	2 cut(s)	1315, 1672
MaeI	CTAG	4 cut(s)	486, 782, 1397, 1812
MaeII	ACGT	2 cut(s)	876, 1735
MaeIII	GTNAC	6 cut(s)	50, 344, 515, 635, 971, 1774
MalI	GATC	8 cut(s)	21, 45, 442, 603, 951, 1185, 1395, 1653
MboI	GATC	8 cut(s)	19, 43, 440, 601, 949, 1183, 1393, 1651
MflI	RGATCY	4 cut(s)	43, 440, 1393, 1651
MhlI	GDGCHC	7 cut(s)	146, 946, 1020, 1054, 1209, 1513, 1628
MlyI	GAGTC	3 cut(s)	47, 1010, 1031
MmeI	TCCRAC	3 cut(s)	220, 682, 978
MslI	CAYNNNNRTG	2 cut(s)	1496, 1848
MspI	CCGG	1 cut(s)	1682
MspR9I	CCNGG	2 cut(s)	558, 766
Mva1269I	GAATGC	1 cut(s)	1359
MvaI	CCWGG	2 cut(s)	558, 766
MwoI	GCNNNNNNNGC	4 cut(s)	596, 665, 1024, 1769
NdeII	GATC	8 cut(s)	19, 43, 440, 601, 949, 1183, 1393, 1651
NlaIII	CATG	7 cut(s)	203, 244, 265, 353, 611, 1312, 1495
NlaIV	GGNNCC	3 cut(s)	442, 728, 1653
NmuCI	GTSAC	5 cut(s)	50, 344, 515, 635, 971
NspI	RCATGY	1 cut(s)	203
OliI	CACNNNNGTG	1 cut(s)	1848
PaeR7I	CTCGAG	1 cut(s)	1019
PceI	AGGCCT	1 cut(s)	1613
PciSI	GCTCTTC	1 cut(s)	84
PctI	GAATGC	1 cut(s)	1359
PfeI	GAWTC	1 cut(s)	423
PkrI	GCNGC	4 cut(s)	1135, 1138, 1452, 1885
PleI	GAGTC	3 cut(s)	47, 1009, 1030
PpsI	GAGTC	3 cut(s)	47, 1009, 1030
PpuMI	RGGWCCY	2 cut(s)	187, 727
PshBI	ATTAAT	1 cut(s)	1476
PsiI	TTATAA	1 cut(s)	1709
Psp124BI	GAGCTC	2 cut(s)	1020, 1209
Psp1406I	AACGTT	1 cut(s)	1735
Psp5II	RGGWCCY	2 cut(s)	187, 727
Psp6I	CCWGG	2 cut(s)	556, 764
PspEI	GGTNACC	1 cut(s)	635
PspGI	CCWGG	2 cut(s)	556, 764
PspN4I	GGNNCC	3 cut(s)	442, 728, 1653
PspPI	GGNCC	3 cut(s)	187, 727, 1693
PspPPI	RGGWCCY	2 cut(s)	187, 727
PspXI	VCTCGAGB	1 cut(s)	1019
PstI	CTGCAG	2 cut(s)	1141, 1455
PsuI	RGATCY	4 cut(s)	43, 440, 1393, 1651
RsaI	GTAC	2 cut(s)	903, 1643
RsaNI	GTAC	2 cut(s)	902, 1642
RseI	CAYNNNNRTG	2 cut(s)	1496, 1848
SacI	GAGCTC	2 cut(s)	1020, 1209
SapI	GCTCTTC	1 cut(s)	84
SatI	GCNGC	4 cut(s)	1134, 1137, 1451, 1884
Sau3AI	GATC	8 cut(s)	19, 43, 440, 601, 949, 1183, 1393, 1651
Sau96I	GGNCC	3 cut(s)	187, 727, 1693
ScaI	AGTACT	1 cut(s)	1643
SchI	GAGTC	3 cut(s)	47, 1010, 1031
ScrFI	CCNGG	2 cut(s)	558, 766
SduI	GDGCHC	7 cut(s)	146, 946, 1020, 1054, 1209, 1513, 1628
SfaNI	GCATC	2 cut(s)	1315, 1672
SfcI	CTRYAG	2 cut(s)	1137, 1451
Sfr274I	CTCGAG	1 cut(s)	1019
SinI	GGWCC	2 cut(s)	187, 727
SlaI	CTCGAG	1 cut(s)	1019
SmiMI	CAYNNNNRTG	2 cut(s)	1496, 1848
SmlI	CTYRAG	2 cut(s)	986, 1019
SmoI	CTYRAG	2 cut(s)	986, 1019
SseBI	AGGCCT	1 cut(s)	1613
SsiI	CCGC	4 cut(s)	125, 169, 670, 1815
SspI	AATATT	2 cut(s)	278, 697
SspMI	CTAG	4 cut(s)	486, 782, 1397, 1812
SstI	GAGCTC	2 cut(s)	1020, 1209
StuI	AGGCCT	1 cut(s)	1613
StyD4I	CCNGG	2 cut(s)	556, 764
StyI	CCWWGG	1 cut(s)	371
TaaI	ACNGT	1 cut(s)	1322
TaiI	ACGT	2 cut(s)	879, 1738
TaqI	TCGA	3 cut(s)	87, 339, 1020
TatI	WGTACW	1 cut(s)	1641
TfiI	GAWTC	1 cut(s)	423
TscAI	CASTG	1 cut(s)	679
TseFI	GTSAC	5 cut(s)	50, 344, 515, 635, 971
TseI	GCWGC	4 cut(s)	1133, 1136, 1450, 1883
Tsp45I	GTSAC	5 cut(s)	50, 344, 515, 635, 971
TspGWI	ACGGA	2 cut(s)	704, 1096
TspRI	CASTG	1 cut(s)	679
VneI	GTGCAC	1 cut(s)	942
VpaK11BI	GGWCC	2 cut(s)	187, 727
VspI	ATTAAT	1 cut(s)	1476
XagI	CCTNNNNNAGG	1 cut(s)	375
XapI	RAATTY	2 cut(s)	539, 1102
XbaI	TCTAGA	2 cut(s)	485, 1396
XceI	RCATGY	1 cut(s)	203
XcmI	CCANNNNNNNNNTGG	1 cut(s)	203
XhoI	CTCGAG	1 cut(s)	1019
XspI	CTAG	4 cut(s)	486, 782, 1397, 1812
ZrmI	AGTACT	1 cut(s)	1643

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.