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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g27990 |
| rosa_chinensis | RchiOBHm_Chr1g0374931 RchiOBHm_Chr1g0374941 RchiOBHm_Chr6g0304571 |
| rosa_multiflora | Rmu_co8270627.1_g000001 Rmu_co8277111.1_g000001 Rmu_sc0003145.1_g000012 |
| rosa_roxburghii | Rroxscaffold_1G00062580 Rroxscaffold_4G00294190 Rroxscaffold_4G00309270 |
| rosa_rugosa | Rorug01G0386200 |
| rosa_wichuraiana | Rw1G035260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 173 |
| AcoI | YGGCCR | 1 cut(s) | 85 |
| AcvI | CACGTG | 1 cut(s) | 57 |
| AdeI | CACNNNGTG | 1 cut(s) | 60 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 94, 197 |
| AgsI | TTSAA | 2 cut(s) | 218, 245 |
| AluBI | AGCT | 2 cut(s) | 241, 295 |
| AluI | AGCT | 2 cut(s) | 241, 295 |
| Aor13HI | TCCGGA | 1 cut(s) | 173 |
| AoxI | GGCC | 1 cut(s) | 85 |
| AspLEI | GCGC | 1 cut(s) | 25 |
| BbrPI | CACGTG | 1 cut(s) | 57 |
| BccI | CCATC | 1 cut(s) | 283 |
| BceAI | ACGGC | 1 cut(s) | 111 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 14, 48 |
| BclI | TGATCA | 1 cut(s) | 298 |
| BglII | AGATCT | 1 cut(s) | 220 |
| BpuEI | CTTGAG | 1 cut(s) | 209 |
| BsaAI | YACGTR | 1 cut(s) | 57 |
| BsaJI | CCNNGG | 1 cut(s) | 74 |
| BsaWI | WCCGGW | 1 cut(s) | 173 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 94, 197 |
| BseAI | TCCGGA | 1 cut(s) | 173 |
| BseDI | CCNNGG | 1 cut(s) | 74 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 94, 197 |
| BseRI | GAGGAG | 2 cut(s) | 53, 167 |
| BshFI | GGCC | 1 cut(s) | 87 |
| BsiSI | CCGG | 1 cut(s) | 174 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 94, 197 |
| BsnI | GGCC | 1 cut(s) | 87 |
| Bsp13I | TCCGGA | 1 cut(s) | 173 |
| Bsp143I | GATC | 4 cut(s) | 51, 142, 220, 298 |
| BspANI | GGCC | 1 cut(s) | 87 |
| BspEI | TCCGGA | 1 cut(s) | 173 |
| BssECI | CCNNGG | 1 cut(s) | 74 |
| BssMI | GATC | 4 cut(s) | 51, 142, 220, 298 |
| Bst6I | CTCTTC | 3 cut(s) | 39, 121, 133 |
| BstBAI | YACGTR | 1 cut(s) | 57 |
| BstDSI | CCRYGG | 1 cut(s) | 74 |
| BstHHI | GCGC | 1 cut(s) | 25 |
| BstKTI | GATC | 4 cut(s) | 54, 145, 223, 301 |
| BstMBI | GATC | 4 cut(s) | 51, 142, 220, 298 |
| BstX2I | RGATCY | 1 cut(s) | 220 |
| BstYI | RGATCY | 1 cut(s) | 220 |
| BsuRI | GGCC | 1 cut(s) | 87 |
| BtgI | CCRYGG | 1 cut(s) | 74 |
| CfoI | GCGC | 1 cut(s) | 25 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 233, 268 |
| CviAII | CATG | 1 cut(s) | 203 |
| CviJI | RGCY | 4 cut(s) | 64, 87, 241, 295 |
| CviKI_1 | RGCY | 4 cut(s) | 64, 87, 241, 295 |
| DpnI | GATC | 4 cut(s) | 53, 144, 222, 300 |
| DpnII | GATC | 4 cut(s) | 51, 142, 220, 298 |
| DraIII | CACNNNGTG | 1 cut(s) | 60 |
| EaeI | YGGCCR | 1 cut(s) | 85 |
| Eam1104I | CTCTTC | 3 cut(s) | 39, 121, 133 |
| EarI | CTCTTC | 3 cut(s) | 39, 121, 133 |
| Eco72I | CACGTG | 1 cut(s) | 57 |
| FaeI | CATG | 1 cut(s) | 206 |
| FaiI | YATR | 2 cut(s) | 204, 210 |
| FatI | CATG | 1 cut(s) | 202 |
| FbaI | TGATCA | 1 cut(s) | 298 |
| GlaI | GCGC | 1 cut(s) | 24 |
| HaeIII | GGCC | 1 cut(s) | 87 |
| HapII | CCGG | 1 cut(s) | 174 |
| HhaI | GCGC | 1 cut(s) | 25 |
| Hin1II | CATG | 1 cut(s) | 206 |
| Hin6I | GCGC | 1 cut(s) | 23 |
| HinP1I | GCGC | 1 cut(s) | 23 |
| HindIII | AAGCTT | 1 cut(s) | 239 |
| HinfI | GANTC | 2 cut(s) | 100, 117 |
| HpaII | CCGG | 1 cut(s) | 174 |
| Hpy188III | TCNNGA | 5 cut(s) | 35, 174, 226, 302, 310 |
| Hpy99I | CGWCG | 2 cut(s) | 36, 97 |
| HpyAV | CCTTC | 1 cut(s) | 107 |
| HpyCH4IV | ACGT | 1 cut(s) | 56 |
| HpySE526I | ACGT | 1 cut(s) | 56 |
| Hsp92II | CATG | 1 cut(s) | 206 |
| HspAI | GCGC | 1 cut(s) | 23 |
| Kpn2I | TCCGGA | 1 cut(s) | 173 |
| Ksp22I | TGATCA | 1 cut(s) | 298 |
| Kzo9I | GATC | 4 cut(s) | 51, 142, 220, 298 |
| LmnI | GCTCC | 1 cut(s) | 292 |
| LpnPI | CCDG | 1 cut(s) | 187 |
| MaeII | ACGT | 1 cut(s) | 56 |
| MalI | GATC | 4 cut(s) | 53, 144, 222, 300 |
| MboI | GATC | 4 cut(s) | 51, 142, 220, 298 |
| MboII | GAAGA | 4 cut(s) | 56, 138, 150, 230 |
| MflI | RGATCY | 1 cut(s) | 220 |
| MnlI | CCTC | 7 cut(s) | 31, 34, 40, 122, 145, 249, 259 |
| MroI | TCCGGA | 1 cut(s) | 173 |
| MseI | TTAA | 1 cut(s) | 81 |
| MspI | CCGG | 1 cut(s) | 174 |
| NdeII | GATC | 4 cut(s) | 51, 142, 220, 298 |
| NlaIII | CATG | 1 cut(s) | 206 |
| PfeI | GAWTC | 2 cut(s) | 100, 117 |
| PmaCI | CACGTG | 1 cut(s) | 57 |
| PmlI | CACGTG | 1 cut(s) | 57 |
| Ppu21I | YACGTR | 1 cut(s) | 57 |
| PspCI | CACGTG | 1 cut(s) | 57 |
| PsuI | RGATCY | 1 cut(s) | 220 |
| SaqAI | TTAA | 1 cut(s) | 81 |
| Sau3AI | GATC | 4 cut(s) | 51, 142, 220, 298 |
| SetI | ASST | 6 cut(s) | 59, 167, 189, 243, 251, 297 |
| SmlI | CTYRAG | 1 cut(s) | 224 |
| SmoI | CTYRAG | 1 cut(s) | 224 |
| TaiI | ACGT | 1 cut(s) | 59 |
| TaqI | TCGA | 1 cut(s) | 34 |
| TfiI | GAWTC | 2 cut(s) | 100, 117 |
| Tru1I | TTAA | 1 cut(s) | 81 |
| Tru9I | TTAA | 1 cut(s) | 81 |
| TspGWI | ACGGA | 1 cut(s) | 288 |