Secretory carrier-associated membrane protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0007131 RchiOBHm_Chr5g0007411 |
| rosa_multiflora | Rmu_co8074744.1_g000001 Rmu_sc0012775.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00038990 Rroxscaffold_1G00069110 Rroxscaffold_4G00322800 |
| rosa_samantha | Rh1AG289900 Rh3CG256800 Rh4BG047200 Rh5AG054900 Rh5BG234000 Rh5DG051600 Rh5DG384400 Rh5DG564000 Rh6CG209500 Rh7AG486500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfiI | CCNNNNNNNGG | 1 cut(s) | 209 |
| AgsI | TTSAA | 2 cut(s) | 172, 226 |
| AluBI | AGCT | 2 cut(s) | 251, 260 |
| AluI | AGCT | 2 cut(s) | 251, 260 |
| ApeKI | GCWGC | 2 cut(s) | 305, 308 |
| AsuHPI | GGTGA | 2 cut(s) | 135, 197 |
| BauI | CACGAG | 1 cut(s) | 312 |
| BbsI | GAAGAC | 1 cut(s) | 349 |
| BbvI | GCAGC | 2 cut(s) | 292, 320 |
| BccI | CCATC | 1 cut(s) | 203 |
| BfmI | CTRYAG | 1 cut(s) | 306 |
| BisI | GCNGC | 2 cut(s) | 306, 309 |
| BlsI | GCNGC | 2 cut(s) | 307, 310 |
| BmsI | GCATC | 1 cut(s) | 292 |
| BpiI | GAAGAC | 1 cut(s) | 349 |
| BpmI | CTGGAG | 2 cut(s) | 118, 138 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 209 |
| Bse3DI | GCAATG | 1 cut(s) | 114 |
| BseGI | GGATG | 1 cut(s) | 307 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 209 |
| BseMI | GCAATG | 1 cut(s) | 114 |
| BseMII | CTCAG | 1 cut(s) | 257 |
| BseXI | GCAGC | 2 cut(s) | 292, 320 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 209 |
| BspCNI | CTCAG | 1 cut(s) | 258 |
| BspHI | TCATGA | 1 cut(s) | 7 |
| BspMAI | CTGCAG | 1 cut(s) | 310 |
| BsrDI | GCAATG | 1 cut(s) | 114 |
| BssSI | CACGAG | 1 cut(s) | 312 |
| Bst2BI | CACGAG | 1 cut(s) | 312 |
| Bst4CI | ACNGT | 1 cut(s) | 193 |
| Bst6I | CTCTTC | 3 cut(s) | 71, 91, 99 |
| BstDEI | CTNAG | 1 cut(s) | 266 |
| BstF5I | GGATG | 1 cut(s) | 307 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 257 |
| BstSFI | CTRYAG | 1 cut(s) | 306 |
| BstV1I | GCAGC | 2 cut(s) | 292, 320 |
| BstV2I | GAAGAC | 1 cut(s) | 349 |
| BtsCI | GGATG | 1 cut(s) | 307 |
| CciI | TCATGA | 1 cut(s) | 7 |
| CviAII | CATG | 2 cut(s) | 8, 107 |
| CviJI | RGCY | 3 cut(s) | 58, 251, 260 |
| CviKI_1 | RGCY | 3 cut(s) | 58, 251, 260 |
| DdeI | CTNAG | 1 cut(s) | 266 |
| Eam1104I | CTCTTC | 3 cut(s) | 71, 91, 99 |
| EarI | CTCTTC | 3 cut(s) | 71, 91, 99 |
| FaeI | CATG | 2 cut(s) | 11, 110 |
| FaiI | YATR | 6 cut(s) | 9, 33, 108, 177, 200, 323 |
| FatI | CATG | 2 cut(s) | 7, 106 |
| Fnu4HI | GCNGC | 2 cut(s) | 306, 309 |
| FokI | GGATG | 1 cut(s) | 314 |
| Fsp4HI | GCNGC | 2 cut(s) | 306, 309 |
| GluI | GCNGC | 2 cut(s) | 306, 309 |
| GsuI | CTGGAG | 2 cut(s) | 118, 138 |
| Hin1II | CATG | 2 cut(s) | 11, 110 |
| HinfI | GANTC | 3 cut(s) | 4, 11, 91 |
| HphI | GGTGA | 2 cut(s) | 135, 197 |
| Hpy166II | GTNNAC | 1 cut(s) | 39 |
| Hpy188III | TCNNGA | 4 cut(s) | 8, 135, 155, 278 |
| Hpy8I | GTNNAC | 1 cut(s) | 39 |
| HpyAV | CCTTC | 1 cut(s) | 48 |
| HpyCH4III | ACNGT | 1 cut(s) | 193 |
| HpyCH4IV | ACGT | 1 cut(s) | 160 |
| HpyCH4V | TGCA | 1 cut(s) | 308 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 257 |
| HpyF3I | CTNAG | 1 cut(s) | 266 |
| HpySE526I | ACGT | 1 cut(s) | 160 |
| Hsp92II | CATG | 2 cut(s) | 11, 110 |
| LpnPI | CCDG | 3 cut(s) | 148, 150, 168 |
| Lsp1109I | GCAGC | 2 cut(s) | 292, 320 |
| LweI | GCATC | 1 cut(s) | 292 |
| MaeII | ACGT | 1 cut(s) | 160 |
| MboII | GAAGA | 4 cut(s) | 58, 78, 86, 349 |
| MluCI | AATT | 2 cut(s) | 27, 172 |
| MlyI | GAGTC | 1 cut(s) | 85 |
| MnlI | CCTC | 7 cut(s) | 108, 156, 162, 225, 231, 292, 308 |
| MseI | TTAA | 1 cut(s) | 375 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 257 |
| NlaIII | CATG | 2 cut(s) | 11, 110 |
| PagI | TCATGA | 1 cut(s) | 7 |
| PfeI | GAWTC | 2 cut(s) | 4, 11 |
| PkrI | GCNGC | 2 cut(s) | 307, 310 |
| PleI | GAGTC | 1 cut(s) | 85 |
| PpsI | GAGTC | 1 cut(s) | 85 |
| PstI | CTGCAG | 1 cut(s) | 310 |
| SaqAI | TTAA | 1 cut(s) | 375 |
| SatI | GCNGC | 2 cut(s) | 306, 309 |
| SchI | GAGTC | 1 cut(s) | 85 |
| SetI | ASST | 6 cut(s) | 148, 163, 205, 253, 262, 319 |
| SfaNI | GCATC | 1 cut(s) | 292 |
| SfcI | CTRYAG | 1 cut(s) | 306 |
| Sse9I | AATT | 2 cut(s) | 27, 172 |
| TaaI | ACNGT | 1 cut(s) | 193 |
| TaiI | ACGT | 1 cut(s) | 163 |
| TaqI | TCGA | 3 cut(s) | 52, 60, 89 |
| TasI | AATT | 2 cut(s) | 27, 172 |
| TfiI | GAWTC | 2 cut(s) | 4, 11 |
| Tru1I | TTAA | 1 cut(s) | 375 |
| Tru9I | TTAA | 1 cut(s) | 375 |
| TseI | GCWGC | 2 cut(s) | 305, 308 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspGWI | ACGGA | 1 cut(s) | 307 |