Secretory carrier-associated membrane protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0007131 RchiOBHm_Chr5g0007411 |
| rosa_multiflora | Rmu_co8074744.1_g000001 Rmu_sc0012775.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00038990 Rroxscaffold_1G00069110 Rroxscaffold_4G00322800 |
| rosa_samantha | Rh1AG289900 Rh3CG256800 Rh4BG047200 Rh5AG054900 Rh5BG234000 Rh5DG051600 Rh5DG384400 Rh5DG564000 Rh6CG209500 Rh7AG486500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 110 |
| AccBSI | CCGCTC | 1 cut(s) | 6 |
| AciI | CCGC | 2 cut(s) | 6, 94 |
| AcvI | CACGTG | 1 cut(s) | 30 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 110, 212 |
| AgsI | TTSAA | 2 cut(s) | 175, 229 |
| AluBI | AGCT | 3 cut(s) | 254, 263, 320 |
| AluI | AGCT | 3 cut(s) | 254, 263, 320 |
| Alw26I | GTCTC | 1 cut(s) | 29 |
| Ama87I | CYCGRG | 1 cut(s) | 18 |
| AoxI | GGCC | 1 cut(s) | 347 |
| ApeKI | GCWGC | 2 cut(s) | 308, 311 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 118 |
| AsuHPI | GGTGA | 2 cut(s) | 138, 200 |
| AvaI | CYCGRG | 1 cut(s) | 18 |
| BauI | CACGAG | 1 cut(s) | 315 |
| BbrPI | CACGTG | 1 cut(s) | 30 |
| BbvI | GCAGC | 2 cut(s) | 295, 323 |
| BccI | CCATC | 2 cut(s) | 206, 378 |
| BcoDI | GTCTC | 1 cut(s) | 29 |
| BfaI | CTAG | 1 cut(s) | 62 |
| BfmI | CTRYAG | 1 cut(s) | 309 |
| BisI | GCNGC | 2 cut(s) | 309, 312 |
| BlsI | GCNGC | 2 cut(s) | 310, 313 |
| BmeT110I | CYCGRG | 1 cut(s) | 18 |
| BmsI | GCATC | 1 cut(s) | 295 |
| BpmI | CTGGAG | 3 cut(s) | 121, 141, 353 |
| BsaAI | YACGTR | 1 cut(s) | 30 |
| BsaI | GGTCTC | 1 cut(s) | 29 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 110, 212 |
| BseGI | GGATG | 1 cut(s) | 310 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 110, 212 |
| BseMII | CTCAG | 1 cut(s) | 260 |
| BseXI | GCAGC | 2 cut(s) | 295, 323 |
| BshFI | GGCC | 1 cut(s) | 349 |
| BsiHKCI | CYCGRG | 1 cut(s) | 18 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 110, 212 |
| BsmAI | GTCTC | 1 cut(s) | 29 |
| BsnI | GGCC | 1 cut(s) | 349 |
| Bso31I | GGTCTC | 1 cut(s) | 29 |
| BsoBI | CYCGRG | 1 cut(s) | 18 |
| BspACI | CCGC | 2 cut(s) | 6, 94 |
| BspANI | GGCC | 1 cut(s) | 349 |
| BspCNI | CTCAG | 1 cut(s) | 261 |
| BspHI | TCATGA | 1 cut(s) | 373 |
| BspMAI | CTGCAG | 1 cut(s) | 313 |
| BspTNI | GGTCTC | 1 cut(s) | 29 |
| BsrBI | CCGCTC | 1 cut(s) | 6 |
| BssSI | CACGAG | 1 cut(s) | 315 |
| Bst2BI | CACGAG | 1 cut(s) | 315 |
| Bst6I | CTCTTC | 1 cut(s) | 276 |
| BstBAI | YACGTR | 1 cut(s) | 30 |
| BstC8I | GCNNGC | 2 cut(s) | 90, 94 |
| BstDEI | CTNAG | 1 cut(s) | 269 |
| BstF5I | GGATG | 1 cut(s) | 310 |
| BstMAI | GTCTC | 1 cut(s) | 29 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 260, 317 |
| BstSFI | CTRYAG | 1 cut(s) | 309 |
| BstV1I | GCAGC | 2 cut(s) | 295, 323 |
| BsuRI | GGCC | 1 cut(s) | 349 |
| BtsCI | GGATG | 1 cut(s) | 310 |
| Cac8I | GCNNGC | 2 cut(s) | 90, 94 |
| CciI | TCATGA | 1 cut(s) | 373 |
| CviAII | CATG | 2 cut(s) | 110, 374 |
| CviJI | RGCY | 6 cut(s) | 61, 92, 254, 263, 320, 349 |
| CviKI_1 | RGCY | 6 cut(s) | 61, 92, 254, 263, 320, 349 |
| DdeI | CTNAG | 1 cut(s) | 269 |
| Eam1104I | CTCTTC | 1 cut(s) | 276 |
| EarI | CTCTTC | 1 cut(s) | 276 |
| Eco31I | GGTCTC | 1 cut(s) | 29 |
| Eco72I | CACGTG | 1 cut(s) | 30 |
| Eco88I | CYCGRG | 1 cut(s) | 18 |
| FaeI | CATG | 2 cut(s) | 113, 377 |
| FaiI | YATR | 5 cut(s) | 11, 111, 180, 203, 375 |
| FatI | CATG | 2 cut(s) | 109, 373 |
| FauI | CCCGC | 1 cut(s) | 101 |
| Fnu4HI | GCNGC | 2 cut(s) | 309, 312 |
| FokI | GGATG | 1 cut(s) | 317 |
| Fsp4HI | GCNGC | 2 cut(s) | 309, 312 |
| FspBI | CTAG | 1 cut(s) | 62 |
| GluI | GCNGC | 2 cut(s) | 309, 312 |
| GsuI | CTGGAG | 3 cut(s) | 121, 141, 353 |
| HaeIII | GGCC | 1 cut(s) | 349 |
| Hin1II | CATG | 2 cut(s) | 113, 377 |
| HinfI | GANTC | 1 cut(s) | 100 |
| HphI | GGTGA | 2 cut(s) | 138, 200 |
| Hpy188I | TCNGA | 1 cut(s) | 68 |
| Hpy188III | TCNNGA | 4 cut(s) | 138, 158, 332, 374 |
| HpyAV | CCTTC | 1 cut(s) | 401 |
| HpyCH4IV | ACGT | 1 cut(s) | 29 |
| HpyCH4V | TGCA | 2 cut(s) | 311, 383 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 260, 317 |
| HpyF3I | CTNAG | 1 cut(s) | 269 |
| HpySE526I | ACGT | 1 cut(s) | 29 |
| Hsp92II | CATG | 2 cut(s) | 113, 377 |
| LpnPI | CCDG | 8 cut(s) | 82, 138, 151, 153, 171, 219, 306, 317 |
| Lsp1109I | GCAGC | 2 cut(s) | 295, 323 |
| LweI | GCATC | 1 cut(s) | 295 |
| MaeI | CTAG | 1 cut(s) | 62 |
| MaeII | ACGT | 1 cut(s) | 29 |
| MbiI | CCGCTC | 1 cut(s) | 6 |
| MboII | GAAGA | 1 cut(s) | 293 |
| MluCI | AATT | 3 cut(s) | 175, 324, 343 |
| MnlI | CCTC | 8 cut(s) | 14, 159, 165, 228, 234, 295, 328, 360 |
| MroXI | GAANNNNTTC | 1 cut(s) | 118 |
| MspA1I | CMGCKG | 1 cut(s) | 96 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 260, 317 |
| NlaIII | CATG | 2 cut(s) | 113, 377 |
| PaeR7I | CTCGAG | 1 cut(s) | 18 |
| PagI | TCATGA | 1 cut(s) | 373 |
| PdmI | GAANNNNTTC | 1 cut(s) | 118 |
| PfeI | GAWTC | 1 cut(s) | 100 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 110 |
| PkrI | GCNGC | 2 cut(s) | 310, 313 |
| PmaCI | CACGTG | 1 cut(s) | 30 |
| PmlI | CACGTG | 1 cut(s) | 30 |
| Ppu21I | YACGTR | 1 cut(s) | 30 |
| PspCI | CACGTG | 1 cut(s) | 30 |
| PspXI | VCTCGAGB | 1 cut(s) | 18 |
| PstI | CTGCAG | 1 cut(s) | 313 |
| SatI | GCNGC | 2 cut(s) | 309, 312 |
| SetI | ASST | 7 cut(s) | 25, 32, 151, 208, 256, 265, 322 |
| SfaNI | GCATC | 1 cut(s) | 295 |
| SfcI | CTRYAG | 1 cut(s) | 309 |
| Sfr274I | CTCGAG | 1 cut(s) | 18 |
| SlaI | CTCGAG | 1 cut(s) | 18 |
| SmlI | CTYRAG | 1 cut(s) | 18 |
| SmoI | CTYRAG | 1 cut(s) | 18 |
| Sse9I | AATT | 3 cut(s) | 175, 324, 343 |
| SsiI | CCGC | 2 cut(s) | 6, 94 |
| SspMI | CTAG | 1 cut(s) | 62 |
| TaiI | ACGT | 1 cut(s) | 32 |
| TaqI | TCGA | 1 cut(s) | 19 |
| TasI | AATT | 3 cut(s) | 175, 324, 343 |
| TfiI | GAWTC | 1 cut(s) | 100 |
| TseI | GCWGC | 2 cut(s) | 308, 311 |
| TspDTI | ATGAA | 2 cut(s) | 30, 62 |
| TspGWI | ACGGA | 1 cut(s) | 310 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 110 |
| XhoI | CTCGAG | 1 cut(s) | 18 |
| XmnI | GAANNNNTTC | 1 cut(s) | 118 |
| XspI | CTAG | 1 cut(s) | 62 |