THO complex subunit
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0110801 |
| rosa_roxburghii | Rroxscaffold_5G00335760 Rroxscaffold_7G00187890 |
| rosa_rugosa | Rorug03G0290400 Rorug04G0001100 Rorug06G0100500 Rorug06G0369100 |
| rosa_samantha | Rh2AG221800 Rh2CG224500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 34 |
| AccI | GTMKAC | 2 cut(s) | 139, 243 |
| AccII | CGCG | 1 cut(s) | 213 |
| AciI | CCGC | 1 cut(s) | 265 |
| AcoI | YGGCCR | 1 cut(s) | 280 |
| AgsI | TTSAA | 1 cut(s) | 169 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 56, 88 |
| Alw26I | GTCTC | 1 cut(s) | 155 |
| AoxI | GGCC | 1 cut(s) | 280 |
| ApeKI | GCWGC | 1 cut(s) | 118 |
| AspLEI | GCGC | 1 cut(s) | 213 |
| AspS9I | GGNCC | 1 cut(s) | 271 |
| AsuC2I | CCSGG | 1 cut(s) | 269 |
| AvaII | GGWCC | 1 cut(s) | 271 |
| BauI | CACGAG | 1 cut(s) | 156 |
| BbvI | GCAGC | 1 cut(s) | 105 |
| BceAI | ACGGC | 1 cut(s) | 267 |
| BcnI | CCSGG | 1 cut(s) | 269 |
| BcoDI | GTCTC | 1 cut(s) | 155 |
| BfaI | CTAG | 1 cut(s) | 230 |
| BfmI | CTRYAG | 2 cut(s) | 41, 247 |
| BfuAI | ACCTGC | 1 cut(s) | 34 |
| BisI | GCNGC | 2 cut(s) | 119, 265 |
| BlsI | GCNGC | 2 cut(s) | 120, 266 |
| Bme1390I | CCNGG | 1 cut(s) | 269 |
| Bme18I | GGWCC | 1 cut(s) | 271 |
| BmgT120I | GGNCC | 1 cut(s) | 271 |
| BmiI | GGNNCC | 2 cut(s) | 95, 272 |
| BmrFI | CCNGG | 1 cut(s) | 269 |
| BmrI | ACTGGG | 1 cut(s) | 152 |
| BmsI | GCATC | 1 cut(s) | 105 |
| BmuI | ACTGGG | 1 cut(s) | 152 |
| BpuMI | CCSGG | 1 cut(s) | 269 |
| BsaI | GGTCTC | 1 cut(s) | 155 |
| BsaJI | CCNNGG | 1 cut(s) | 89 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 56, 86 |
| Bse1I | ACTGG | 1 cut(s) | 147 |
| BseDI | CCNNGG | 1 cut(s) | 89 |
| BseNI | ACTGG | 1 cut(s) | 147 |
| BseXI | GCAGC | 1 cut(s) | 105 |
| BsgI | GTGCAG | 2 cut(s) | 89, 104 |
| Bsh1236I | CGCG | 1 cut(s) | 213 |
| BshFI | GGCC | 1 cut(s) | 282 |
| BsiSI | CCGG | 1 cut(s) | 268 |
| BsmAI | GTCTC | 1 cut(s) | 155 |
| BsnI | GGCC | 1 cut(s) | 282 |
| Bso31I | GGTCTC | 1 cut(s) | 155 |
| BspACI | CCGC | 1 cut(s) | 265 |
| BspANI | GGCC | 1 cut(s) | 282 |
| BspFNI | CGCG | 1 cut(s) | 213 |
| BspLI | GGNNCC | 2 cut(s) | 95, 272 |
| BspMAI | CTGCAG | 1 cut(s) | 45 |
| BspMI | ACCTGC | 1 cut(s) | 34 |
| BspTNI | GGTCTC | 1 cut(s) | 155 |
| BsrI | ACTGG | 1 cut(s) | 147 |
| BssECI | CCNNGG | 1 cut(s) | 89 |
| BssSI | CACGAG | 1 cut(s) | 156 |
| Bst2BI | CACGAG | 1 cut(s) | 156 |
| Bst6I | CTCTTC | 1 cut(s) | 182 |
| BstFNI | CGCG | 1 cut(s) | 213 |
| BstHHI | GCGC | 1 cut(s) | 213 |
| BstMAI | GTCTC | 1 cut(s) | 155 |
| BstNSI | RCATGY | 1 cut(s) | 229 |
| BstSCI | CCNGG | 1 cut(s) | 267 |
| BstSFI | CTRYAG | 2 cut(s) | 41, 247 |
| BstUI | CGCG | 1 cut(s) | 213 |
| BstV1I | GCAGC | 1 cut(s) | 105 |
| BsuRI | GGCC | 1 cut(s) | 282 |
| BveI | ACCTGC | 1 cut(s) | 34 |
| CfoI | GCGC | 1 cut(s) | 213 |
| Cfr13I | GGNCC | 1 cut(s) | 271 |
| CviAII | CATG | 1 cut(s) | 226 |
| CviJI | RGCY | 6 cut(s) | 5, 23, 88, 104, 264, 282 |
| CviKI_1 | RGCY | 6 cut(s) | 5, 23, 88, 104, 264, 282 |
| EaeI | YGGCCR | 1 cut(s) | 280 |
| Eam1104I | CTCTTC | 1 cut(s) | 182 |
| EarI | CTCTTC | 1 cut(s) | 182 |
| Eco31I | GGTCTC | 1 cut(s) | 155 |
| Eco47I | GGWCC | 1 cut(s) | 271 |
| FaeI | CATG | 1 cut(s) | 229 |
| FatI | CATG | 1 cut(s) | 225 |
| FblI | GTMKAC | 2 cut(s) | 139, 243 |
| Fnu4HI | GCNGC | 2 cut(s) | 119, 265 |
| Fsp4HI | GCNGC | 2 cut(s) | 119, 265 |
| FspBI | CTAG | 1 cut(s) | 230 |
| GlaI | GCGC | 1 cut(s) | 212 |
| GluI | GCNGC | 2 cut(s) | 119, 265 |
| HaeIII | GGCC | 1 cut(s) | 282 |
| HapII | CCGG | 1 cut(s) | 268 |
| HhaI | GCGC | 1 cut(s) | 213 |
| Hin1II | CATG | 1 cut(s) | 229 |
| Hin6I | GCGC | 1 cut(s) | 211 |
| HinP1I | GCGC | 1 cut(s) | 211 |
| HinfI | GANTC | 2 cut(s) | 126, 197 |
| HpaII | CCGG | 1 cut(s) | 268 |
| Hpy166II | GTNNAC | 3 cut(s) | 49, 140, 244 |
| Hpy188I | TCNGA | 1 cut(s) | 275 |
| Hpy188III | TCNNGA | 1 cut(s) | 158 |
| Hpy8I | GTNNAC | 3 cut(s) | 49, 140, 244 |
| HpyCH4V | TGCA | 3 cut(s) | 43, 70, 121 |
| Hsp92II | CATG | 1 cut(s) | 229 |
| HspAI | GCGC | 1 cut(s) | 211 |
| LpnPI | CCDG | 5 cut(s) | 5, 29, 98, 128, 281 |
| Lsp1109I | GCAGC | 1 cut(s) | 105 |
| LweI | GCATC | 1 cut(s) | 105 |
| MaeI | CTAG | 1 cut(s) | 230 |
| MboII | GAAGA | 2 cut(s) | 8, 199 |
| MluCI | AATT | 1 cut(s) | 171 |
| MnlI | CCTC | 2 cut(s) | 58, 84 |
| MseI | TTAA | 1 cut(s) | 286 |
| MspI | CCGG | 1 cut(s) | 268 |
| MspR9I | CCNGG | 1 cut(s) | 269 |
| MvnI | CGCG | 1 cut(s) | 213 |
| NciI | CCSGG | 1 cut(s) | 269 |
| NlaIII | CATG | 1 cut(s) | 229 |
| NlaIV | GGNNCC | 2 cut(s) | 95, 272 |
| NmeAIII | GCCGAG | 1 cut(s) | 114 |
| NspI | RCATGY | 1 cut(s) | 229 |
| PfeI | GAWTC | 2 cut(s) | 126, 197 |
| PkrI | GCNGC | 2 cut(s) | 120, 266 |
| PspN4I | GGNNCC | 2 cut(s) | 95, 272 |
| PspPI | GGNCC | 1 cut(s) | 271 |
| PstI | CTGCAG | 1 cut(s) | 45 |
| SaqAI | TTAA | 1 cut(s) | 286 |
| SatI | GCNGC | 2 cut(s) | 119, 265 |
| Sau96I | GGNCC | 1 cut(s) | 271 |
| ScrFI | CCNGG | 1 cut(s) | 269 |
| SetI | ASST | 6 cut(s) | 14, 48, 69, 99, 167, 254 |
| SfaNI | GCATC | 1 cut(s) | 105 |
| SfcI | CTRYAG | 2 cut(s) | 41, 247 |
| SinI | GGWCC | 1 cut(s) | 271 |
| Sse9I | AATT | 1 cut(s) | 171 |
| SsiI | CCGC | 1 cut(s) | 265 |
| SspMI | CTAG | 1 cut(s) | 230 |
| StyD4I | CCNGG | 1 cut(s) | 267 |
| TaqI | TCGA | 1 cut(s) | 129 |
| TasI | AATT | 1 cut(s) | 171 |
| TauI | GCSGC | 1 cut(s) | 267 |
| TfiI | GAWTC | 2 cut(s) | 126, 197 |
| Tru1I | TTAA | 1 cut(s) | 286 |
| Tru9I | TTAA | 1 cut(s) | 286 |
| TseI | GCWGC | 1 cut(s) | 118 |
| TspDTI | ATGAA | 1 cut(s) | 210 |
| TspGWI | ACGGA | 2 cut(s) | 24, 246 |
| VpaK11BI | GGWCC | 1 cut(s) | 271 |
| XceI | RCATGY | 1 cut(s) | 229 |
| XmiI | GTMKAC | 2 cut(s) | 139, 243 |
| XspI | CTAG | 1 cut(s) | 230 |