Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0014317

Physical Location & Seq

Genomic Coordinates Reverse (-)

49848203 .. 49852651

Gene Structure 4449 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00368120.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1938 bp

ATGGCGGTAGTACCTCTCTTCGTCACGGCAACGAAGCTCGCCGGATTATTGGCCACCCTCACCGTCGCTGCCAATGTCTTCTCTTTCTCACGCTACCGGAAGAAGAATCTCCGGCCGTTCCGCTCCCCGATCGACGAGTCCTCCGACCCTCTGGCCGACTTCAATCTCAACGAAGGGGAAGATGGGTTCTTCTTTGGGTTGGCGACGGCTCCAGCGCACGTTGAAGACGGGCTAAATGATGCTTGGCTTCAGTTTGCGCAAGAAAATCCTTGTGACAAATCAGAGTCTCAAGGTGATCGGCAGACAGCTGATGCTATAATGGGTTCCGCCACTGGCAATGGTGCGTCTCAGCCAGCTCCCCCATCGGGAATTCCTAAGAAAAAGAAGCCTCCTAAGATAGCTATGGAAGCCATGATTAGAGGGTATGCAAAGTATATTAAAGGGGACACAGGAGAAGAAGAAGAAGAAGAAGAAAAACCTGTCCCAAATGAAGAATGCCATCATAATGTAGCTGCATGGCACAATGTTGAGCACCCAGAGGAGAGGATAAAGTTTTGGTCCGATCCTGATACTGAGCTAAAACTGGCTAAAGATACTGGCATCAGTGTCTTCCGAATGGGAATAGATTGGTCACGAGTCATGCCAGAGGAGCCGCTCAATGGGCTTACAAAAACTGTTAACTATGCTGCATTGGAGCGATACAAGTGGATCATCGGCAGGGTTCGCTCGTACGGAATGAAGGTGATGTTGACTCTCTTCCATCACTCATTGCCACCATGGGCTGGGGAGTATGGAGGGTGGAAAGTGGAAAAGACAGTTGATTATTTCTTGGATTTCACAAGGCTTGTTGTTGACAGTGTATCAGATATGATAGACTATTGGGTACCATTCAATGAGCCTCATGTCTTCTGTATGCTTACCTATTGTGCGGGTGCATGGCCTGGTGGCCATCCTGACATGCTGGAGGTTGCGACTTCTGCTCTACCAACTGGTGTTTTCAAACAGGCTATGCATTGGATGGCCATTGCACACTTAAAGGCCTATGACTATATCCACGAGAAAAGTACCTCATCCAAGCCATTAGTTGGAGTGGCACACCATGTCTCATTCATGCGGCCATATGGTCTCTTTGATGTTCCTGCTGTTACACTGGCCAACTCCATGACTGTCTTCCCATATGTGGATAGTATTTCTGACAAGCTGGATTTTATTGGCATAAACTACTATGGACAGGAAGTGGTGTGTGGTGCTGGACTGAAGCTAGTAGAGACTGACGAATATAGTGAATCCGGACGTGGGATATACCCAGATGGCTTGTACCGCATGCTGCTTCAGTTCAATGACAGATATAAACATCTAAATGTACCCTTCATAATTACTGAAAATGGGGTATCTGATGAGACAGATGTAATCCGTCGGCCTTACCTGCTAGAGCATTTGCTTGCTGTTCATGCAGCCAAGATCATGGGTGTCCGTGTGCTTGGTTACCTGTTTTGGACTATTTCTGATAACTGGGAGTGGGCAGATGGGTATGGTCCCAAGTTTGGACTGGTAGCAGTCGATCGGGCCAAAGATCTTGCCCGGGTTCCACGTCCTTCATGCCATCTATTTACTAAGGTGGTGACAACAGGTAAAATTACACGTTTTGACCGGGCGCGTGCATGGCACCAACTCCAAATAGCTGCTAGAGAAAAGAAAATGCGATCCTTTTATCGGGCTGTTAATAAAGATGGTTTGATGTATGCAGGAGGCCTTGATGAACCTATACAGAGACCCTATGTTGAAAGAGATTGGCGATTCGGACACTATGAGATGGAAGGTCTTCAGGACCCCATCTGTCGCTTATGGAGATTCATGACCCGACCTGCCACCCTAAAATTTAGGAAAAGGAAACCCCAGATGGATGAAGAGGATGAAGCTCTATTGGTTCTCCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006950 GO:0008150 GO:0008152 GO:0008378 GO:0008422 GO:0009266 GO:0009409 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009628 GO:0009707 GO:0009941 GO:0015926 GO:0016020 GO:0016021 GO:0016740 GO:0016757 GO:0016758 GO:0016787 GO:0016798 GO:0019867 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031350 GO:0031351 GO:0031354 GO:0031355 GO:0031358 GO:0031359 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0042170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0050826 GO:0050896 GO:0071704 GO:0080079 GO:0098588 GO:0098805 GO:1901135 GO:1901657

KEGG Pathways

Metabolic & Signaling

ko00561 map00561

Pfam Domains

Protein Families

Glyco_hydro_1

Protein Analysis

645

Amino Acids

73.26

Weight (kDa)

6.09

Isoelectric Point (pI)

37.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_1	PF00232	185 - 375	3.1e-29	Glycosyl hydrolase family 1
Glyco_hydro_1	PF00232	396 - 543	2.2e-20	Glycosyl hydrolase family 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014317)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06510 AT3G06510
fragaria_vesca	FvH4_4g20710
malus_domestica	MD16G1148600.v1.1
prunus_persica	Prupe.1G112100_v2.0.a1 Prupe.1G112100_v2.0.a1 Prupe.1G112100_v2.0.a1
pyrus_communis	pycom16g12690
rosa_chinensis	RchiOBHm_Chr4g0426131
rosa_laevigata	RLG00000007317
rosa_multiflora	Rmu_co8494203.1_g000001
rosa_roxburghii	Rroxscaffold_5G00368120
rosa_rugosa	Rorug04G0209300
rosa_samantha	Rh4AG265800 Rh4CG284800 Rh4DG268000
rosa_wichuraiana	Rw4G022970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	258
Acc36I	ACCTGC	2 cut(s)	1434, 1873
Acc65I	GGTACC	1 cut(s)	883
AccB1I	GGYRCC	2 cut(s)	883, 1665
AccB7I	CCANNNNNTGG	2 cut(s)	782, 1085
AccBSI	CCGCTC	2 cut(s)	123, 655
AccII	CGCG	1 cut(s)	1657
AccIII	TCCGGA	1 cut(s)	1289
AciI	CCGC	7 cut(s)	5, 121, 327, 653, 929, 1114, 1321
AclWI	GGATC	3 cut(s)	557, 716, 1698
AcoI	YGGCCR	7 cut(s)	51, 113, 153, 946, 1020, 1115, 1152
AcsI	RAATTY	2 cut(s)	369, 1877
AcuI	CTGAAG	4 cut(s)	233, 1277, 1316, 1808
AfaI	GTAC	6 cut(s)	12, 731, 885, 1066, 1319, 1365
AfiI	CCNNNNNNNGG	8 cut(s)	365, 659, 782, 1085, 1180, 1296, 1544, 1713
AflIII	ACRYGT	1 cut(s)	1640
AgsI	TTSAA	6 cut(s)	163, 224, 892, 1000, 1339, 1784
AjiI	CACGTC	2 cut(s)	1295, 1592
AjnI	CCWGG	1 cut(s)	940
AloI	GAACNNNNNNTCC	2 cut(s)	170, 202
Alw21I	GWGCWC	1 cut(s)	534
Alw26I	GTCTC	7 cut(s)	291, 351, 1108, 1130, 1262, 1394, 1765
AlwI	GGATC	3 cut(s)	557, 716, 1698
Ama87I	CYCGRG	1 cut(s)	1581
Aor13HI	TCCGGA	1 cut(s)	1289
ApeKI	GCWGC	6 cut(s)	68, 512, 686, 1327, 1454, 1682
ApoI	RAATTY	2 cut(s)	369, 1877
Asp700I	GAANNNNTTC	1 cut(s)	1821
Asp718I	GGTACC	1 cut(s)	883
AspLEI	GCGC	3 cut(s)	217, 259, 1657
AspS9I	GGNCC	4 cut(s)	558, 1535, 1566, 1828
AsuC2I	CCSGG	3 cut(s)	1582, 1583, 1652
AsuHPI	GGTGA	4 cut(s)	52, 305, 754, 1633
AvaI	CYCGRG	1 cut(s)	1581
AvaII	GGWCC	3 cut(s)	558, 1535, 1828
BalI	TGGCCA	4 cut(s)	53, 948, 1022, 1154
BanI	GGYRCC	2 cut(s)	883, 1665
BauI	CACGAG	2 cut(s)	633, 1055
BbsI	GAAGAC	6 cut(s)	70, 231, 601, 898, 1162, 1814
Bbv12I	GWGCWC	1 cut(s)	534
BbvI	GCAGC	6 cut(s)	55, 499, 673, 1314, 1466, 1669
BceAI	ACGGC	3 cut(s)	42, 100, 222
BciT130I	CCWGG	1 cut(s)	942
BcnI	CCSGG	3 cut(s)	1582, 1583, 1652
BcoDI	GTCTC	7 cut(s)	291, 351, 1108, 1130, 1262, 1394, 1765
BfaI	CTAG	3 cut(s)	1262, 1430, 1686
BfuAI	ACCTGC	2 cut(s)	1434, 1873
BglII	AGATCT	1 cut(s)	1573
BisI	GCNGC	8 cut(s)	69, 513, 653, 687, 1115, 1328, 1455, 1683
BlsI	GCNGC	8 cut(s)	70, 514, 654, 688, 1116, 1329, 1456, 1684
Bme1390I	CCNGG	4 cut(s)	942, 1582, 1583, 1652
Bme18I	GGWCC	3 cut(s)	558, 1535, 1828
BmeT110I	CYCGRG	1 cut(s)	1581
BmgBI	CACGTC	2 cut(s)	1295, 1592
BmgT120I	GGNCC	4 cut(s)	558, 1535, 1566, 1828
BmiI	GGNNCC	8 cut(s)	210, 325, 651, 885, 1537, 1587, 1667, 1830
BmrFI	CCNGG	4 cut(s)	942, 1582, 1583, 1652
BmrI	ACTGGG	1 cut(s)	1522
BmsI	GCATC	3 cut(s)	229, 301, 609
BmuI	ACTGGG	1 cut(s)	1522
BpiI	GAAGAC	6 cut(s)	70, 231, 601, 898, 1162, 1814
BpmI	CTGGAG	3 cut(s)	195, 983, 1916
BpuEI	CTTGAG	1 cut(s)	273
BpuMI	CCSGG	3 cut(s)	1582, 1583, 1652
BsaI	GGTCTC	2 cut(s)	1130, 1765
BsaJI	CCNNGG	2 cut(s)	776, 1581
BsaWI	WCCGGW	2 cut(s)	96, 1289
BsaXI	ACNNNNNCTCC	2 cut(s)	125, 155
Bsc4I	CCNNNNNNNGG	8 cut(s)	365, 659, 782, 1085, 1180, 1296, 1544, 1713
Bse1I	ACTGG	8 cut(s)	337, 588, 601, 994, 1155, 1517, 1554, 1933
Bse3DI	GCAATG	3 cut(s)	343, 767, 1023
BseAI	TCCGGA	1 cut(s)	1289
BseBI	CCWGG	1 cut(s)	942
BseDI	CCNNGG	2 cut(s)	776, 1581
BseGI	GGATG	5 cut(s)	949, 1023, 1070, 1909, 1918
BseLI	CCNNNNNNNGG	8 cut(s)	365, 659, 782, 1085, 1180, 1296, 1544, 1713
BseMI	GCAATG	3 cut(s)	343, 767, 1023
BseMII	CTCAG	2 cut(s)	362, 564
BseNI	ACTGG	8 cut(s)	337, 588, 601, 994, 1155, 1517, 1554, 1933
BseRI	GAGGAG	2 cut(s)	554, 662
BseX3I	CGGCCG	1 cut(s)	113
BseXI	GCAGC	6 cut(s)	55, 499, 673, 1314, 1466, 1669
BseYI	CCCAGC	1 cut(s)	782
Bsh1236I	CGCG	1 cut(s)	1657
Bsh1285I	CGRYCG	3 cut(s)	116, 132, 1564
BshNI	GGYRCC	2 cut(s)	883, 1665
BsiEI	CGRYCG	3 cut(s)	116, 132, 1564
BsiHKAI	GWGCWC	1 cut(s)	534
BsiHKCI	CYCGRG	1 cut(s)	1581
BsiSI	CCGG	6 cut(s)	42, 97, 112, 1290, 1582, 1651
BsiWI	CGTACG	1 cut(s)	729
BslFI	GGGAC	3 cut(s)	458, 467, 1521
BslI	CCNNNNNNNGG	8 cut(s)	365, 659, 782, 1085, 1180, 1296, 1544, 1713
BsmAI	GTCTC	7 cut(s)	291, 351, 1108, 1130, 1262, 1394, 1765
BsmBI	CGTCTC	1 cut(s)	351
BsmFI	GGGAC	3 cut(s)	458, 467, 1521
BsmI	GAATGC	1 cut(s)	500
Bso31I	GGTCTC	2 cut(s)	1130, 1765
BsoBI	CYCGRG	1 cut(s)	1581
Bsp1286I	GDGCHC	1 cut(s)	534
Bsp13I	TCCGGA	1 cut(s)	1289
Bsp143I	GATC	8 cut(s)	129, 295, 562, 708, 1461, 1561, 1573, 1703
Bsp19I	CCATGG	1 cut(s)	776
BspACI	CCGC	7 cut(s)	5, 121, 327, 653, 929, 1114, 1321
BspCNI	CTCAG	2 cut(s)	361, 565
BspEI	TCCGGA	1 cut(s)	1289
BspFNI	CGCG	1 cut(s)	1657
BspHI	TCATGA	1 cut(s)	1854
BspLI	GGNNCC	8 cut(s)	210, 325, 651, 885, 1537, 1587, 1667, 1830
BspMI	ACCTGC	2 cut(s)	1434, 1873
BspPI	GGATC	3 cut(s)	557, 716, 1698
BspT107I	GGYRCC	2 cut(s)	883, 1665
BspTNI	GGTCTC	2 cut(s)	1130, 1765
BsrBI	CCGCTC	2 cut(s)	123, 655
BsrDI	GCAATG	3 cut(s)	343, 767, 1023
BsrI	ACTGG	8 cut(s)	337, 588, 601, 994, 1155, 1517, 1554, 1933
BssECI	CCNNGG	2 cut(s)	776, 1581
BssMI	GATC	8 cut(s)	129, 295, 562, 708, 1461, 1561, 1573, 1703
BssSI	CACGAG	2 cut(s)	633, 1055
BssT1I	CCWWGG	1 cut(s)	776
Bst2BI	CACGAG	2 cut(s)	633, 1055
Bst2UI	CCWGG	1 cut(s)	942
Bst4CI	ACNGT	5 cut(s)	64, 676, 817, 857, 1168
Bst6I	CTCTTC	3 cut(s)	23, 761, 1902
BstC8I	GCNNGC	5 cut(s)	39, 354, 1325, 1443, 1659
BstDEI	CTNAG	5 cut(s)	348, 375, 393, 573, 1614
BstDSI	CCRYGG	1 cut(s)	776
BstEII	GGTNACC	1 cut(s)	1484
BstF5I	GGATG	5 cut(s)	949, 1023, 1070, 1909, 1918
BstFNI	CGCG	1 cut(s)	1657
BstHHI	GCGC	3 cut(s)	217, 259, 1657
BstKTI	GATC	8 cut(s)	132, 298, 565, 711, 1464, 1564, 1576, 1706
BstMAI	GTCTC	7 cut(s)	291, 351, 1108, 1130, 1262, 1394, 1765
BstMBI	GATC	8 cut(s)	129, 295, 562, 708, 1461, 1561, 1573, 1703
BstMCI	CGRYCG	3 cut(s)	116, 132, 1564
BstMWI	GCNNNNNNNGC	9 cut(s)	407, 649, 661, 723, 977, 1320, 1426, 1451, 1663
BstNI	CCWGG	1 cut(s)	942
BstNSI	RCATGY	2 cut(s)	961, 1327
BstPI	GGTNACC	1 cut(s)	1484
BstSCI	CCNGG	4 cut(s)	940, 1580, 1581, 1650
BstUI	CGCG	1 cut(s)	1657
BstV1I	GCAGC	6 cut(s)	55, 499, 673, 1314, 1466, 1669
BstV2I	GAAGAC	6 cut(s)	70, 231, 601, 898, 1162, 1814
BstX2I	RGATCY	1 cut(s)	1573
BstXI	CCANNNNNNTGG	1 cut(s)	1465
BstYI	RGATCY	1 cut(s)	1573
BstZI	CGGCCG	1 cut(s)	113
BtgI	CCRYGG	1 cut(s)	776
BtrI	CACGTC	2 cut(s)	1295, 1592
BtsCI	GGATG	5 cut(s)	949, 1023, 1070, 1909, 1918
BtsIMutI	CAGTG	4 cut(s)	330, 610, 862, 1148
BveI	ACCTGC	2 cut(s)	1434, 1873
Cac8I	GCNNGC	5 cut(s)	39, 354, 1325, 1443, 1659
CciI	TCATGA	1 cut(s)	1854
CfoI	GCGC	3 cut(s)	217, 259, 1657
Cfr13I	GGNCC	4 cut(s)	558, 1535, 1566, 1828
Cfr9I	CCCGGG	1 cut(s)	1581
CseI	GACGC	1 cut(s)	333
Csp6I	GTAC	6 cut(s)	11, 730, 884, 1065, 1318, 1364
CviQI	GTAC	6 cut(s)	11, 730, 884, 1065, 1318, 1364
DdeI	CTNAG	5 cut(s)	348, 375, 393, 573, 1614
DpnI	GATC	8 cut(s)	131, 297, 564, 710, 1463, 1563, 1575, 1705
DpnII	GATC	8 cut(s)	129, 295, 562, 708, 1461, 1561, 1573, 1703
EaeI	YGGCCR	7 cut(s)	51, 113, 153, 946, 1020, 1115, 1152
EagI	CGGCCG	1 cut(s)	113
Eam1104I	CTCTTC	3 cut(s)	23, 761, 1902
EarI	CTCTTC	3 cut(s)	23, 761, 1902
EciI	GGCGGA	1 cut(s)	316
EclXI	CGGCCG	1 cut(s)	113
Eco130I	CCWWGG	1 cut(s)	776
Eco147I	AGGCCT	2 cut(s)	1040, 1752
Eco31I	GGTCTC	2 cut(s)	1130, 1765
Eco47I	GGWCC	3 cut(s)	558, 1535, 1828
Eco52I	CGGCCG	1 cut(s)	113
Eco57I	CTGAAG	4 cut(s)	233, 1277, 1316, 1808
Eco88I	CYCGRG	1 cut(s)	1581
Eco91I	GGTNACC	1 cut(s)	1484
EcoO109I	RGGNCCY	1 cut(s)	1828
EcoO65I	GGTNACC	1 cut(s)	1484
EcoRI	GAATTC	1 cut(s)	369
EcoRII	CCWGG	1 cut(s)	940
EcoT14I	CCWWGG	1 cut(s)	776
EcoT22I	ATGCAT	1 cut(s)	1014
ErhI	CCWWGG	1 cut(s)	776
Esp3I	CGTCTC	1 cut(s)	351
FaqI	GGGAC	3 cut(s)	458, 467, 1521
FauI	CCCGC	1 cut(s)	922
FauNDI	CATATG	2 cut(s)	1120, 1177
Fnu4HI	GCNGC	8 cut(s)	69, 513, 653, 687, 1115, 1328, 1455, 1683
FokI	GGATG	5 cut(s)	936, 1030, 1057, 1916, 1925
Fsp4HI	GCNGC	8 cut(s)	69, 513, 653, 687, 1115, 1328, 1455, 1683
FspBI	CTAG	3 cut(s)	1262, 1430, 1686
FspI	TGCGCA	1 cut(s)	258
GlaI	GCGC	3 cut(s)	216, 258, 1656
GluI	GCNGC	8 cut(s)	69, 513, 653, 687, 1115, 1328, 1455, 1683
GsaI	CCCAGC	1 cut(s)	786
GsuI	CTGGAG	3 cut(s)	195, 983, 1916
HapII	CCGG	6 cut(s)	42, 97, 112, 1290, 1582, 1651
HgaI	GACGC	1 cut(s)	333
HhaI	GCGC	3 cut(s)	217, 259, 1657
Hin6I	GCGC	3 cut(s)	215, 257, 1655
HinP1I	GCGC	3 cut(s)	215, 257, 1655
HincII	GTYRAC	3 cut(s)	679, 750, 853
HindII	GTYRAC	3 cut(s)	679, 750, 853
HinfI	GANTC	8 cut(s)	106, 137, 284, 636, 751, 1286, 1797, 1851
HpaI	GTTAAC	1 cut(s)	679
HpaII	CCGG	6 cut(s)	42, 97, 112, 1290, 1582, 1651
HphI	GGTGA	4 cut(s)	52, 305, 754, 1633
Hpy166II	GTNNAC	3 cut(s)	679, 750, 853
Hpy188I	TCNGA	9 cut(s)	145, 283, 562, 614, 865, 1195, 1396, 1507, 1802
Hpy188III	TCNNGA	7 cut(s)	366, 566, 633, 953, 1290, 1826, 1855
Hpy8I	GTNNAC	3 cut(s)	679, 750, 853
Hpy99I	CGWCG	4 cut(s)	68, 137, 208, 1419
HpyAV	CCTTC	5 cut(s)	167, 733, 1378, 1605, 1811
HpyCH4III	ACNGT	5 cut(s)	64, 676, 817, 857, 1168
HpyCH4IV	ACGT	4 cut(s)	219, 1294, 1591, 1642
HpyCH4V	TGCA	9 cut(s)	428, 515, 689, 935, 1012, 1028, 1454, 1661, 1745
HpyF10VI	GCNNNNNNNGC	9 cut(s)	407, 649, 661, 723, 977, 1320, 1426, 1451, 1663
HpyF3I	CTNAG	5 cut(s)	348, 375, 393, 573, 1614
HpySE526I	ACGT	4 cut(s)	219, 1294, 1591, 1642
HspAI	GCGC	3 cut(s)	215, 257, 1655
Kpn2I	TCCGGA	1 cut(s)	1289
KpnI	GGTACC	1 cut(s)	887
KspAI	GTTAAC	1 cut(s)	679
Kzo9I	GATC	8 cut(s)	129, 295, 562, 708, 1461, 1561, 1573, 1703
LmnI	GCTCC	5 cut(s)	128, 214, 361, 649, 694
Lsp1109I	GCAGC	6 cut(s)	55, 499, 673, 1314, 1466, 1669
LweI	GCATC	3 cut(s)	229, 301, 609
MaeI	CTAG	3 cut(s)	1262, 1430, 1686
MaeII	ACGT	4 cut(s)	219, 1294, 1591, 1642
MaeIII	GTNAC	6 cut(s)	22, 272, 630, 1144, 1484, 1621
MalI	GATC	8 cut(s)	131, 297, 564, 710, 1463, 1563, 1575, 1705
MbiI	CCGCTC	2 cut(s)	123, 655
MboI	GATC	8 cut(s)	129, 295, 562, 708, 1461, 1561, 1573, 1703
MflI	RGATCY	1 cut(s)	1573
MhlI	GDGCHC	1 cut(s)	534
MlsI	TGGCCA	4 cut(s)	53, 948, 1022, 1154
MluCI	AATT	4 cut(s)	369, 1374, 1635, 1877
MluNI	TGGCCA	4 cut(s)	53, 948, 1022, 1154
MlyI	GAGTC	4 cut(s)	146, 293, 645, 745
MmeI	TCCRAC	2 cut(s)	168, 1066
Mox20I	TGGCCA	4 cut(s)	53, 948, 1022, 1154
Mph1103I	ATGCAT	1 cut(s)	1014
MroI	TCCGGA	1 cut(s)	1289
MroXI	GAANNNNTTC	1 cut(s)	1821
MscI	TGGCCA	4 cut(s)	53, 948, 1022, 1154
MseI	TTAA	4 cut(s)	438, 678, 1034, 1722
MslI	CAYNNNNRTG	2 cut(s)	504, 1359
Msp20I	TGGCCA	4 cut(s)	53, 948, 1022, 1154
MspA1I	CMGCKG	1 cut(s)	308
MspI	CCGG	6 cut(s)	42, 97, 112, 1290, 1582, 1651
MspR9I	CCNGG	4 cut(s)	942, 1582, 1583, 1652
Mva1269I	GAATGC	1 cut(s)	500
MvaI	CCWGG	1 cut(s)	942
MvnI	CGCG	1 cut(s)	1657
MwoI	GCNNNNNNNGC	9 cut(s)	407, 649, 661, 723, 977, 1320, 1426, 1451, 1663
NciI	CCSGG	3 cut(s)	1582, 1583, 1652
NcoI	CCATGG	1 cut(s)	776
NdeI	CATATG	2 cut(s)	1120, 1177
NdeII	GATC	8 cut(s)	129, 295, 562, 708, 1461, 1561, 1573, 1703
NlaIV	GGNNCC	8 cut(s)	210, 325, 651, 885, 1537, 1587, 1667, 1830
NmuCI	GTSAC	4 cut(s)	22, 272, 630, 1621
NsbI	TGCGCA	1 cut(s)	258
NsiI	ATGCAT	1 cut(s)	1014
NspI	RCATGY	2 cut(s)	961, 1327
PaeI	GCATGC	1 cut(s)	1327
PagI	TCATGA	1 cut(s)	1854
PceI	AGGCCT	2 cut(s)	1040, 1752
PcsI	WCGNNNNNNNCGW	1 cut(s)	141
PctI	GAATGC	1 cut(s)	500
PdmI	GAANNNNTTC	1 cut(s)	1821
PfeI	GAWTC	4 cut(s)	106, 1286, 1797, 1851
Pfl23II	CGTACG	1 cut(s)	729
PflMI	CCANNNNNTGG	2 cut(s)	782, 1085
PkrI	GCNGC	8 cut(s)	70, 514, 654, 688, 1116, 1329, 1456, 1684
Ple19I	CGATCG	2 cut(s)	132, 1564
PleI	GAGTC	4 cut(s)	145, 292, 644, 745
PpsI	GAGTC	4 cut(s)	145, 292, 644, 745
PpuMI	RGGWCCY	1 cut(s)	1828
Psp5II	RGGWCCY	1 cut(s)	1828
Psp6I	CCWGG	1 cut(s)	940
PspEI	GGTNACC	1 cut(s)	1484
PspFI	CCCAGC	1 cut(s)	782
PspGI	CCWGG	1 cut(s)	940
PspLI	CGTACG	1 cut(s)	729
PspN4I	GGNNCC	8 cut(s)	210, 325, 651, 885, 1537, 1587, 1667, 1830
PspPI	GGNCC	4 cut(s)	558, 1535, 1566, 1828
PspPPI	RGGWCCY	1 cut(s)	1828
PsuI	RGATCY	1 cut(s)	1573
PvuI	CGATCG	2 cut(s)	132, 1564
PvuII	CAGCTG	1 cut(s)	308
RsaI	GTAC	6 cut(s)	12, 731, 885, 1066, 1319, 1365
RsaNI	GTAC	6 cut(s)	11, 730, 884, 1065, 1318, 1364
RseI	CAYNNNNRTG	2 cut(s)	504, 1359
SaqAI	TTAA	4 cut(s)	438, 678, 1034, 1722
SatI	GCNGC	8 cut(s)	69, 513, 653, 687, 1115, 1328, 1455, 1683
Sau3AI	GATC	8 cut(s)	129, 295, 562, 708, 1461, 1561, 1573, 1703
Sau96I	GGNCC	4 cut(s)	558, 1535, 1566, 1828
SchI	GAGTC	4 cut(s)	146, 293, 645, 745
ScrFI	CCNGG	4 cut(s)	942, 1582, 1583, 1652
SduI	GDGCHC	1 cut(s)	534
SfaNI	GCATC	3 cut(s)	229, 301, 609
SinI	GGWCC	3 cut(s)	558, 1535, 1828
SmaI	CCCGGG	1 cut(s)	1583
SmiMI	CAYNNNNRTG	2 cut(s)	504, 1359
SmlI	CTYRAG	1 cut(s)	288
SmoI	CTYRAG	1 cut(s)	288
SphI	GCATGC	1 cut(s)	1327
Sse9I	AATT	4 cut(s)	369, 1374, 1635, 1877
SseBI	AGGCCT	2 cut(s)	1040, 1752
SsiI	CCGC	7 cut(s)	5, 121, 327, 653, 929, 1114, 1321
SspMI	CTAG	3 cut(s)	1262, 1430, 1686
StuI	AGGCCT	2 cut(s)	1040, 1752
StyD4I	CCNGG	4 cut(s)	940, 1580, 1581, 1650
StyI	CCWWGG	1 cut(s)	776
TaaI	ACNGT	5 cut(s)	64, 676, 817, 857, 1168
TaiI	ACGT	4 cut(s)	222, 1297, 1594, 1645
TaqI	TCGA	2 cut(s)	132, 1560
TasI	AATT	4 cut(s)	369, 1374, 1635, 1877
TauI	GCSGC	2 cut(s)	655, 1117
TfiI	GAWTC	4 cut(s)	106, 1286, 1797, 1851
Tru1I	TTAA	4 cut(s)	438, 678, 1034, 1722
Tru9I	TTAA	4 cut(s)	438, 678, 1034, 1722
TscAI	CASTG	4 cut(s)	337, 610, 862, 1155
TseFI	GTSAC	4 cut(s)	22, 272, 630, 1621
TseI	GCWGC	6 cut(s)	68, 512, 686, 1327, 1454, 1682
Tsp45I	GTSAC	4 cut(s)	22, 272, 630, 1621
TspGWI	ACGGA	3 cut(s)	747, 1403, 1463
TspMI	CCCGGG	1 cut(s)	1581
TspRI	CASTG	4 cut(s)	337, 610, 862, 1155
Van91I	CCANNNNNTGG	2 cut(s)	782, 1085
VpaK11BI	GGWCC	3 cut(s)	558, 1535, 1828
XapI	RAATTY	2 cut(s)	369, 1877
XceI	RCATGY	2 cut(s)	961, 1327
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1546
XmaI	CCCGGG	1 cut(s)	1581
XmnI	GAANNNNTTC	1 cut(s)	1821
XspI	CTAG	3 cut(s)	1262, 1430, 1686
Zsp2I	ATGCAT	1 cut(s)	1014

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.