Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0015611

Physical Location & Seq

Genomic Coordinates Forward (+)

62889601 .. 62891877

Gene Structure 2277 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00383230.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2277 bp

ATGGACCCCACTCGACAACCTCACCCTCCTCTCCCCCAACTCCCTCTTCGCCGCCGGCTTCCTCCCCCTCCCCTCTTCCCCAAACCTCTTCAACTTCTCCATCTGGTTCCTCAACACCTCCGCCCCAAAAGTCGTCTGGTCCACCAACCCCCGCTGGGCCCCTCCGCTACTCTCTCCATCACCTCCACCGGCGCCCTCCGCCTCTCCAATTCCTCCTCCTCCGGTCAAAACCTCTTGCCAGGAACCCCCTCCGCCGCTCGAAACACCACCCAACTCAAGCTCCGAAACGACGGTAACTTAATCTACGGTACTTGGGACAGCTTCGCCTTCCCGACCGACACCGTATTACCAAACCAATCCATGAAAGGAAACATCACGCTCGTCTCCAAAAACGGCAAGTTCCGGTTCACCAACTCGACTCAGCTCGTCTTCAACCTCACCGAACAGTACCAGAACCTGAAAGACGCCTTCGAGAACCTCGACTTCGACGGCAAGATGACGCAGGCAAACGGCGCGTCGTTCATCGTCTCGGACTTCGGGCTCAACCGCTCACGCAGACTCACCCTCGACAACGACGGCAACCTCCGCATTTACAGCTTCGATCCAAGTATTGCGGACTGGACAGTTGTCTGGCAATCCGGCTACGAGCTCTGTCAGGTGCACGGCACGTGCGGACCCAACGCCATTTGCGTCAGCGACGGTACTAGCTCTAGTTATAATTGCGTCTGCCCGCCCGGGTTTCAACCAGCACCAAATGGAGCCATTGAAGAGCAAGGATGTGAGAGGAAAATCCCTCTTTCCAAAACCACCAAATTTCTAAAGCTTGATTACGTCAACTTTACCGGCGGGTCAAACCAGACGAATTGGCCCGCAACTAACTTCAGCATATGCGAGTCAAGATGTCTGAGTAGACCTAACTGTGAGGGATTCATGTTCAAATATGACGGCAAAGGCTACTGTGTGCTGCAGCTGGATCGGATGCTGTACGGGTACTGGTCGCCTGGAACCGAAACCGCTATGTTTCTCCGGGTGGACGGAGCTGAAAAGGATCAGACCAATTTCACAGGCATGACGGAGCTGCTGGAGACGACGTGTCCTGTGCAGATTAGCCTCCCTCTGCCGCCGCAAGAGTCGAACGCAACCACCAGGAACATAATTATTATATGTACTCTGTTTGCTGCTGAGTTGATTTCTGGGGTGCTGTTCTTCTGGGCTTTTATCAAGAAGTACATTAAGTACAGAGACATGGCTCGGACGCTTGGGCTTGAGTTTCTTCCGGCCGGCGGGCCCAAGCGGTTTTCGTACGCCGAGCTGAAAGCAGCCACCAAAGACTTCTCGAATCTGATCGGGAAAGGTGGGTTTGGGGATGTTTACAGAGGAGAGCTGACGGATCAGAGGGTGGTGGCGGTCAAGTGTTTGAAACACGTGGCCGGCGGCGACGCCGAGTTTTGGGCGGAGGTGACAATCATTGCACGGATGCACCACCTCAATTTGGTGAGGTTGTGGGGCTTCTGCGCGGAGAAAGGTCAGAGAATACTAGTCTATGAGTATGTTCCTAATGGGTCCCTAGACAAGTACCTTTTCCAACCGGGTCGGGTTTTGTCAACGGATCAGGACTCGGACAATGGAGCCCCGGTGGCAGATGCAGAGAAACCGATTCTTGATTGGGGAATAAGGTACCGAATTGCGGTGGGCGTGGCGAGATCAATTGCTTATTTGCACGAGGAGTGTCTCGAATGGGTTTTGCATTGTGATATTAAGCCGGAAAATATACTTCTCGGCGACGACTTTTGCCCGAAAATATCGGACTTCGGGTTGGCGAAGCTGAAGAAGAAGGAGGACATGGTGAGCATATCGCGGATGCAGGGGACCCGCGGGTACATGGCGCCCGAGTGGGTCAAGATGGACCCGATCACGCCCAAGGCTGACGTGTACAGCTTCGGAATGGTGTTGTTGGAGCTTGTGAGTGGGGTCCGGAATAACGAAATCCAAGGGTCGATGATAGAGAGCGAGGATTGGTATTTTCCAAGGTGGGCGTTTGATAAGGTGTTTAAGGAGATGAACGTGGAGGACATTCTCGACCGTCGGATCATGCATTGTTACGATAGCAAGGTGCATTTTGATACGGTGAACCGCATGGTGAAGACGGCGATGTGGTGCCTTCAGGACCGGCCGGAGATGAGGCCGTCGATGGGGAAGGTGGCTAAGATGTTGGAAGGGACGGTGGATATCACGGAACCTAAAAAGCCCACTATATTTTTCCTTGGCGACGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin PAN_2 Pkinase S_locus_glycop

Protein Analysis

758

Amino Acids

85.19

Weight (kDa)

7.45

Isoelectric Point (pI)

37.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
S_locus_glycop	PF00954	179 - 249	1.1e-10	S-locus glycoprotein domain
PK_Tyr_Ser-Thr	PF07714	446 - 737	2.4e-41	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	447 - 734	3.9e-42	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015611)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g33230
malus_domestica	MD16G1015600.v1.1
prunus_persica	Prupe.1G336000_v2.0.a1
pyrus_communis	pycom15g28260 pycom16g01450
rosa_chinensis	RchiOBHm_Chr4g0442381
rosa_laevigata	RLG00000006014
rosa_multiflora	Rmu_co8314767.1_g000001 Rmu_co8434117.1_g000001 Rmu_sc0000124.1_g000043
rosa_roxburghii	Rroxscaffold_5G00383230
rosa_rugosa	Rorug04G0340700
rosa_samantha	Rh4AG392300 Rh4BG406000 Rh4CG421100 Rh4DG399100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	717
Acc65I	GGTACC	1 cut(s)	1677
AccB1I	GGYRCC	4 cut(s)	191, 1677, 1885, 2157
AccBSI	CCGCTC	2 cut(s)	257, 549
AccI	GTMKAC	1 cut(s)	910
AccII	CGCG	4 cut(s)	515, 1517, 1858, 1875
AccIII	TCCGGA	1 cut(s)	1974
AclWI	GGATC	6 cut(s)	596, 981, 1056, 1398, 1617, 2096
AcoI	YGGCCR	3 cut(s)	1278, 1428, 2171
AcsI	RAATTY	1 cut(s)	812
AcuI	CTGAAG	3 cut(s)	865, 1847, 2147
AcvI	CACGTG	2 cut(s)	669, 1426
AcyI	GRCGYC	4 cut(s)	192, 465, 1440, 1886
AfiI	CCNNNNNNNGG	6 cut(s)	155, 1283, 1449, 1492, 1687, 2192
AflIII	ACRYGT	3 cut(s)	1091, 1423, 1929
AgsI	TTSAA	6 cut(s)	92, 433, 743, 767, 937, 1420
AhdI	GACNNNNNGTC	1 cut(s)	1092
AhlI	ACTAGT	1 cut(s)	1537
AjiI	CACGTC	2 cut(s)	1092, 1930
AjnI	CCWGG	3 cut(s)	238, 1000, 1145
AjuI	GAANNNNNNNTTGG	2 cut(s)	30, 62
Alw21I	GWGCWC	2 cut(s)	651, 663
Alw26I	GTCTC	5 cut(s)	388, 532, 1079, 1236, 1736
Alw44I	GTGCAC	1 cut(s)	659
AlwI	GGATC	6 cut(s)	596, 981, 1056, 1398, 1617, 2096
AlwNI	CAGNNNCTG	1 cut(s)	457
Ama87I	CYCGRG	2 cut(s)	734, 1889
Aor13HI	TCCGGA	1 cut(s)	1974
AoxI	GGCC	7 cut(s)	157, 866, 1278, 1286, 1428, 2171, 2183
ApaI	GGGCCC	2 cut(s)	161, 1290
ApaLI	GTGCAC	1 cut(s)	659
ApeKI	GCWGC	5 cut(s)	964, 967, 1078, 1178, 1319
ApoI	RAATTY	1 cut(s)	812
ArsI	GACNNNNNNTTYG	2 cut(s)	500, 532
Asp718I	GGTACC	1 cut(s)	1677
AspLEI	GCGC	4 cut(s)	194, 515, 1517, 1888
AsuC2I	CCSGG	5 cut(s)	735, 736, 1028, 1590, 1634
AvaI	CYCGRG	2 cut(s)	734, 1889
AvaII	GGWCC	8 cut(s)	4, 139, 674, 1563, 1869, 1906, 1972, 2167
BaeGI	GKGCMC	3 cut(s)	161, 663, 1290
BanI	GGYRCC	4 cut(s)	191, 1677, 1885, 2157
BanII	GRGCYC	5 cut(s)	161, 543, 651, 1290, 1633
BauI	CACGAG	1 cut(s)	1721
BbrPI	CACGTG	2 cut(s)	669, 1426
BbsI	GAAGAC	2 cut(s)	421, 2150
Bbv12I	GWGCWC	2 cut(s)	651, 663
BbvI	GCAGC	5 cut(s)	951, 979, 1065, 1165, 1331
BccI	CCATC	4 cut(s)	108, 185, 1897, 2185
BceAI	ACGGC	8 cut(s)	409, 505, 526, 592, 679, 961, 2163, 2170
BcgI	CGANNNNNNTGC	2 cut(s)	956, 990
BciT130I	CCWGG	3 cut(s)	240, 1002, 1147
BcnI	CCSGG	5 cut(s)	735, 736, 1028, 1590, 1634
BcoDI	GTCTC	5 cut(s)	388, 532, 1079, 1236, 1736
BcuI	ACTAGT	1 cut(s)	1537
BfaI	CTAG	5 cut(s)	705, 711, 1538, 1568, 2275
BfmI	CTRYAG	1 cut(s)	965
BfoI	RGCGCY	2 cut(s)	195, 1889
BglI	GCCNNNNNGGC	1 cut(s)	1637
Bme1390I	CCNGG	8 cut(s)	240, 735, 736, 1002, 1028, 1147, 1590, 1634
Bme18I	GGWCC	8 cut(s)	4, 139, 674, 1563, 1869, 1906, 1972, 2167
BmeRI	GACNNNNNGTC	1 cut(s)	1092
BmeT110I	CYCGRG	2 cut(s)	734, 1889
BmgBI	CACGTC	2 cut(s)	1092, 1930
BmrFI	CCNGG	8 cut(s)	240, 735, 736, 1002, 1028, 1147, 1590, 1634
BmsI	GCATC	4 cut(s)	969, 1467, 1633, 1851
BoxI	GACNNNNGTC	1 cut(s)	626
BpiI	GAAGAC	2 cut(s)	421, 2150
BpmI	CTGGAG	1 cut(s)	1103
BpuEI	CTTGAG	2 cut(s)	260, 1286
BpuMI	CCSGG	5 cut(s)	735, 736, 1028, 1590, 1634
BsaAI	YACGTR	2 cut(s)	669, 1426
BsaHI	GRCGYC	4 cut(s)	192, 465, 1440, 1886
BsaJI	CCNNGG	7 cut(s)	734, 1632, 1873, 1920, 1990, 2027, 2263
BsaWI	WCCGGW	3 cut(s)	221, 402, 1974
BsaXI	ACNNNNNCTCC	6 cut(s)	264, 294, 1076, 1106, 1620, 1650
Bsc4I	CCNNNNNNNGG	6 cut(s)	155, 1283, 1449, 1492, 1687, 2192
Bse118I	RCCGGY	6 cut(s)	54, 188, 842, 1280, 1430, 2169
Bse1I	ACTGG	2 cut(s)	623, 998
Bse3DI	GCAATG	1 cut(s)	1467
BseAI	TCCGGA	1 cut(s)	1974
BseBI	CCWGG	3 cut(s)	240, 1002, 1147
BseDI	CCNNGG	7 cut(s)	734, 1632, 1873, 1920, 1990, 2027, 2263
BseGI	GGATG	5 cut(s)	782, 984, 1372, 1482, 1866
BseLI	CCNNNNNNNGG	6 cut(s)	155, 1283, 1449, 1492, 1687, 2192
BseMI	GCAATG	1 cut(s)	1467
BseMII	CTCAG	3 cut(s)	434, 896, 1173
BseNI	ACTGG	2 cut(s)	623, 998
BseRI	GAGGAG	5 cut(s)	18, 205, 208, 1392, 1739
BseSI	GKGCMC	3 cut(s)	161, 663, 1290
BseX3I	CGGCCG	2 cut(s)	1278, 2171
BseXI	GCAGC	5 cut(s)	951, 979, 1065, 1165, 1331
BseYI	CCCAGC	1 cut(s)	154
BsgI	GTGCAG	1 cut(s)	1121
Bsh1236I	CGCG	4 cut(s)	515, 1517, 1858, 1875
Bsh1285I	CGRYCG	4 cut(s)	336, 1281, 2083, 2174
BshFI	GGCC	7 cut(s)	159, 868, 1280, 1288, 1430, 2173, 2185
BshNI	GGYRCC	4 cut(s)	191, 1677, 1885, 2157
BsiEI	CGRYCG	4 cut(s)	336, 1281, 2083, 2174
BsiHKAI	GWGCWC	2 cut(s)	651, 663
BsiHKCI	CYCGRG	2 cut(s)	734, 1889
BsiWI	CGTACG	1 cut(s)	1302
BslFI	GGGAC	4 cut(s)	329, 1549, 1882, 2233
BslI	CCNNNNNNNGG	6 cut(s)	155, 1283, 1449, 1492, 1687, 2192
BsmAI	GTCTC	5 cut(s)	388, 532, 1079, 1236, 1736
BsmBI	CGTCTC	3 cut(s)	388, 532, 1079
BsmFI	GGGAC	4 cut(s)	329, 1549, 1882, 2233
BsnI	GGCC	7 cut(s)	159, 868, 1280, 1288, 1430, 2173, 2185
BsoBI	CYCGRG	2 cut(s)	734, 1889
Bsp120I	GGGCCC	2 cut(s)	157, 1286
Bsp1286I	GDGCHC	6 cut(s)	161, 543, 651, 663, 1290, 1633
Bsp13I	TCCGGA	1 cut(s)	1974
Bsp1407I	TGTACA	1 cut(s)	1932
Bsp143I	GATC	9 cut(s)	601, 973, 1048, 1344, 1390, 1609, 1703, 1911, 2088
BspANI	GGCC	7 cut(s)	159, 868, 1280, 1288, 1430, 2173, 2185
BspCNI	CTCAG	3 cut(s)	433, 897, 1174
BspEI	TCCGGA	1 cut(s)	1974
BspFNI	CGCG	4 cut(s)	515, 1517, 1858, 1875
BspMAI	CTGCAG	1 cut(s)	969
BspPI	GGATC	6 cut(s)	596, 981, 1056, 1398, 1617, 2096
BspQI	GCTCTTC	1 cut(s)	762
BspT107I	GGYRCC	4 cut(s)	191, 1677, 1885, 2157
BsrBI	CCGCTC	2 cut(s)	257, 549
BsrDI	GCAATG	1 cut(s)	1467
BsrFI	RCCGGY	6 cut(s)	54, 188, 842, 1280, 1430, 2169
BsrGI	TGTACA	1 cut(s)	1932
BsrI	ACTGG	2 cut(s)	623, 998
BssAI	RCCGGY	6 cut(s)	54, 188, 842, 1280, 1430, 2169
BssECI	CCNNGG	7 cut(s)	734, 1632, 1873, 1920, 1990, 2027, 2263
BssMI	GATC	9 cut(s)	601, 973, 1048, 1344, 1390, 1609, 1703, 1911, 2088
BssNI	GRCGYC	4 cut(s)	192, 465, 1440, 1886
BssSI	CACGAG	1 cut(s)	1721
BssT1I	CCWWGG	4 cut(s)	1920, 1990, 2027, 2263
Bst2BI	CACGAG	1 cut(s)	1721
Bst2UI	CCWGG	3 cut(s)	240, 1002, 1147
Bst6I	CTCTTC	4 cut(s)	51, 80, 93, 762
BstACI	GRCGYC	4 cut(s)	192, 465, 1440, 1886
BstAUI	TGTACA	1 cut(s)	1932
BstBAI	YACGTR	2 cut(s)	669, 1426
BstC8I	GCNNGC	7 cut(s)	56, 504, 731, 870, 1282, 1286, 1432
BstDEI	CTNAG	4 cut(s)	420, 905, 1182, 2205
BstDSI	CCRYGG	1 cut(s)	1873
BstF5I	GGATG	5 cut(s)	782, 984, 1372, 1482, 1866
BstFNI	CGCG	4 cut(s)	515, 1517, 1858, 1875
BstH2I	RGCGCY	2 cut(s)	195, 1889
BstHHI	GCGC	4 cut(s)	194, 515, 1517, 1888
BstKTI	GATC	9 cut(s)	604, 976, 1051, 1347, 1393, 1612, 1706, 1914, 2091
BstMAI	GTCTC	5 cut(s)	388, 532, 1079, 1236, 1736
BstMBI	GATC	9 cut(s)	601, 973, 1048, 1344, 1390, 1609, 1703, 1911, 2088
BstMCI	CGRYCG	4 cut(s)	336, 1281, 2083, 2174
BstMWI	GCNNNNNNNGC	5 cut(s)	198, 512, 585, 594, 1637
BstNI	CCWGG	3 cut(s)	240, 1002, 1147
BstPAI	GACNNNNGTC	1 cut(s)	626
BstSCI	CCNGG	8 cut(s)	238, 733, 734, 1000, 1026, 1145, 1588, 1632
BstSFI	CTRYAG	1 cut(s)	965
BstSLI	GKGCMC	3 cut(s)	161, 663, 1290
BstUI	CGCG	4 cut(s)	515, 1517, 1858, 1875
BstV1I	GCAGC	5 cut(s)	951, 979, 1065, 1165, 1331
BstV2I	GAAGAC	2 cut(s)	421, 2150
BstZI	CGGCCG	2 cut(s)	1278, 2171
BsuRI	GGCC	7 cut(s)	159, 868, 1280, 1288, 1430, 2173, 2185
BtgI	CCRYGG	1 cut(s)	1873
BtgZI	GCGATG	1 cut(s)	2165
BtrI	CACGTC	2 cut(s)	1092, 1930
BtsCI	GGATG	5 cut(s)	782, 984, 1372, 1482, 1866
Cac8I	GCNNGC	7 cut(s)	56, 504, 731, 870, 1282, 1286, 1432
CaiI	CAGNNNCTG	1 cut(s)	457
CfoI	GCGC	4 cut(s)	194, 515, 1517, 1888
Cfr10I	RCCGGY	6 cut(s)	54, 188, 842, 1280, 1430, 2169
Cfr42I	CCGCGG	1 cut(s)	1876
Cfr9I	CCCGGG	1 cut(s)	734
CseI	GACGC	7 cut(s)	473, 504, 508, 679, 712, 1264, 1448
CviAII	CATG	8 cut(s)	361, 931, 1069, 1246, 1843, 1882, 2092, 2137
DdeI	CTNAG	4 cut(s)	420, 905, 1182, 2205
DinI	GGCGCC	2 cut(s)	193, 1887
DpnI	GATC	9 cut(s)	603, 975, 1050, 1346, 1392, 1611, 1705, 1913, 2090
DpnII	GATC	9 cut(s)	601, 973, 1048, 1344, 1390, 1609, 1703, 1911, 2088
DriI	GACNNNNNGTC	1 cut(s)	1092
EaeI	YGGCCR	3 cut(s)	1278, 1428, 2171
EagI	CGGCCG	2 cut(s)	1278, 2171
Eam1104I	CTCTTC	4 cut(s)	51, 80, 93, 762
Eam1105I	GACNNNNNGTC	1 cut(s)	1092
EarI	CTCTTC	4 cut(s)	51, 80, 93, 762
EciI	GGCGGA	4 cut(s)	110, 188, 241, 1469
Ecl136II	GAGCTC	1 cut(s)	649
EclXI	CGGCCG	2 cut(s)	1278, 2171
Eco130I	CCWWGG	4 cut(s)	1920, 1990, 2027, 2263
Eco24I	GRGCYC	5 cut(s)	161, 543, 651, 1290, 1633
Eco32I	GATATC	1 cut(s)	2230
Eco47I	GGWCC	8 cut(s)	4, 139, 674, 1563, 1869, 1906, 1972, 2167
Eco52I	CGGCCG	2 cut(s)	1278, 2171
Eco53kI	GAGCTC	1 cut(s)	649
Eco57I	CTGAAG	3 cut(s)	865, 1847, 2147
Eco72I	CACGTG	2 cut(s)	669, 1426
Eco88I	CYCGRG	2 cut(s)	734, 1889
EcoICRI	GAGCTC	1 cut(s)	649
EcoO109I	RGGNCCY	3 cut(s)	158, 1563, 1869
EcoRII	CCWGG	3 cut(s)	238, 1000, 1145
EcoRV	GATATC	1 cut(s)	2230
EcoT14I	CCWWGG	4 cut(s)	1920, 1990, 2027, 2263
EcoT22I	ATGCAT	1 cut(s)	2097
EcoT38I	GRGCYC	5 cut(s)	161, 543, 651, 1290, 1633
EgeI	GGCGCC	2 cut(s)	193, 1887
EheI	GGCGCC	2 cut(s)	193, 1887
ErhI	CCWWGG	4 cut(s)	1920, 1990, 2027, 2263
Esp3I	CGTCTC	3 cut(s)	388, 532, 1079
FaeI	CATG	8 cut(s)	364, 934, 1072, 1249, 1846, 1885, 2095, 2140
FaqI	GGGAC	4 cut(s)	329, 1549, 1882, 2233
FatI	CATG	8 cut(s)	360, 930, 1068, 1245, 1842, 1881, 2091, 2136
FauI	CCCGC	7 cut(s)	159, 738, 839, 877, 1277, 1868, 1880
FauNDI	CATATG	1 cut(s)	887
FblI	GTMKAC	1 cut(s)	910
FokI	GGATG	5 cut(s)	789, 991, 1379, 1489, 1873
FriOI	GRGCYC	5 cut(s)	161, 543, 651, 1290, 1633
FspBI	CTAG	5 cut(s)	705, 711, 1538, 1568, 2275
GlaI	GCGC	4 cut(s)	193, 514, 1516, 1887
GsaI	CCCAGC	1 cut(s)	158
GsuI	CTGGAG	1 cut(s)	1103
HaeII	RGCGCY	2 cut(s)	195, 1889
HaeIII	GGCC	7 cut(s)	159, 868, 1280, 1288, 1430, 2173, 2185
HgaI	GACGC	7 cut(s)	473, 504, 508, 679, 712, 1264, 1448
HhaI	GCGC	4 cut(s)	194, 515, 1517, 1888
Hin1I	GRCGYC	4 cut(s)	192, 465, 1440, 1886
Hin1II	CATG	8 cut(s)	364, 934, 1072, 1249, 1846, 1885, 2095, 2140
Hin6I	GCGC	4 cut(s)	192, 513, 1515, 1886
HinP1I	GCGC	4 cut(s)	192, 513, 1515, 1886
HincII	GTYRAC	2 cut(s)	835, 1605
HindII	GTYRAC	2 cut(s)	835, 1605
HindIII	AAGCTT	1 cut(s)	821
HinfI	GANTC	8 cut(s)	418, 558, 893, 927, 1130, 1339, 1616, 1657
HpyAV	CCTTC	6 cut(s)	337, 478, 1828, 2171, 2191, 2210
HpyCH4IV	ACGT	6 cut(s)	668, 831, 1091, 1425, 1929, 2064
HpyF10VI	GCNNNNNNNGC	5 cut(s)	198, 512, 585, 594, 1637
HpyF3I	CTNAG	4 cut(s)	420, 905, 1182, 2205
HpySE526I	ACGT	6 cut(s)	668, 831, 1091, 1425, 1929, 2064
Hsp92I	GRCGYC	4 cut(s)	192, 465, 1440, 1886
Hsp92II	CATG	8 cut(s)	364, 934, 1072, 1249, 1846, 1885, 2095, 2140
HspAI	GCGC	4 cut(s)	192, 513, 1515, 1886
KasI	GGCGCC	2 cut(s)	191, 1885
KflI	GGGWCCC	2 cut(s)	1563, 1869
Kpn2I	TCCGGA	1 cut(s)	1974
KpnI	GGTACC	1 cut(s)	1681
KroI	GCCGGC	3 cut(s)	54, 1280, 1430
KroNI	GCCGGC	3 cut(s)	56, 1282, 1432
KspI	CCGCGG	1 cut(s)	1876
Kzo9I	GATC	9 cut(s)	601, 973, 1048, 1344, 1390, 1609, 1703, 1911, 2088
LguI	GCTCTTC	1 cut(s)	762
LmnI	GCTCC	6 cut(s)	285, 758, 1037, 1075, 1628, 1957
Lsp1109I	GCAGC	5 cut(s)	951, 979, 1065, 1165, 1331
LweI	GCATC	4 cut(s)	969, 1467, 1633, 1851
MaeI	CTAG	5 cut(s)	705, 711, 1538, 1568, 2275
MaeII	ACGT	6 cut(s)	668, 831, 1091, 1425, 1929, 2064
MaeIII	GTNAC	3 cut(s)	293, 1459, 2099
MalI	GATC	9 cut(s)	603, 975, 1050, 1346, 1392, 1611, 1705, 1913, 2090
MbiI	CCGCTC	2 cut(s)	257, 549
MboI	GATC	9 cut(s)	601, 973, 1048, 1344, 1390, 1609, 1703, 1911, 2088
MfeI	CAATTG	1 cut(s)	1707
MhlI	GDGCHC	6 cut(s)	161, 543, 651, 663, 1290, 1633
MluCI	AATT	9 cut(s)	208, 718, 812, 862, 1057, 1155, 1489, 1683, 1707
Mly113I	GGCGCC	2 cut(s)	192, 1886
MlyI	GAGTC	5 cut(s)	412, 552, 902, 1139, 1610
MmeI	TCCRAC	4 cut(s)	1609, 1935, 2066, 2193
Mph1103I	ATGCAT	1 cut(s)	2097
MroI	TCCGGA	1 cut(s)	1974
MroNI	GCCGGC	3 cut(s)	54, 1280, 1430
MseI	TTAA	4 cut(s)	299, 1233, 1758, 2052
MslI	CAYNNNNRTG	1 cut(s)	1067
MspA1I	CMGCKG	3 cut(s)	154, 970, 1875
MspR9I	CCNGG	8 cut(s)	240, 735, 736, 1002, 1028, 1147, 1590, 1634
MunI	CAATTG	1 cut(s)	1707
MvaI	CCWGG	3 cut(s)	240, 1002, 1147
MvnI	CGCG	4 cut(s)	515, 1517, 1858, 1875
MwoI	GCNNNNNNNGC	5 cut(s)	198, 512, 585, 594, 1637
NaeI	GCCGGC	3 cut(s)	56, 1282, 1432
NarI	GGCGCC	2 cut(s)	192, 1886
NciI	CCSGG	5 cut(s)	735, 736, 1028, 1590, 1634
NdeI	CATATG	1 cut(s)	887
NdeII	GATC	9 cut(s)	601, 973, 1048, 1344, 1390, 1609, 1703, 1911, 2088
NgoMIV	GCCGGC	3 cut(s)	54, 1280, 1430
NlaIII	CATG	8 cut(s)	364, 934, 1072, 1249, 1846, 1885, 2095, 2140
NmeAIII	GCCGAG	3 cut(s)	1333, 1468, 1758
NmuCI	GTSAC	1 cut(s)	1459
NsiI	ATGCAT	1 cut(s)	2097
PciSI	GCTCTTC	1 cut(s)	762
PcsI	WCGNNNNNNNCGW	2 cut(s)	477, 687
PdiI	GCCGGC	3 cut(s)	56, 1282, 1432
PfeI	GAWTC	3 cut(s)	927, 1339, 1657
Pfl23II	CGTACG	1 cut(s)	1302
PleI	GAGTC	5 cut(s)	412, 552, 901, 1138, 1610
PluTI	GGCGCC	2 cut(s)	195, 1889
PmaCI	CACGTG	2 cut(s)	669, 1426
PmlI	CACGTG	2 cut(s)	669, 1426
PpsI	GAGTC	5 cut(s)	412, 552, 901, 1138, 1610
Ppu21I	YACGTR	2 cut(s)	669, 1426
PpuMI	RGGWCCY	2 cut(s)	1563, 1869
PshAI	GACNNNNGTC	1 cut(s)	626
PsiI	TTATAA	1 cut(s)	717
Psp124BI	GAGCTC	1 cut(s)	651
Psp5II	RGGWCCY	2 cut(s)	1563, 1869
Psp6I	CCWGG	3 cut(s)	238, 1000, 1145
PspCI	CACGTG	2 cut(s)	669, 1426
PspFI	CCCAGC	1 cut(s)	154
PspGI	CCWGG	3 cut(s)	238, 1000, 1145
PspLI	CGTACG	1 cut(s)	1302
PspOMI	GGGCCC	2 cut(s)	157, 1286
PspPPI	RGGWCCY	2 cut(s)	1563, 1869
PstI	CTGCAG	1 cut(s)	969
PstNI	CAGNNNCTG	1 cut(s)	457
PvuII	CAGCTG	1 cut(s)	970
RseI	CAYNNNNRTG	1 cut(s)	1067
SacI	GAGCTC	1 cut(s)	651
SacII	CCGCGG	1 cut(s)	1876
SapI	GCTCTTC	1 cut(s)	762
SaqAI	TTAA	4 cut(s)	299, 1233, 1758, 2052
Sau3AI	GATC	9 cut(s)	601, 973, 1048, 1344, 1390, 1609, 1703, 1911, 2088
SchI	GAGTC	5 cut(s)	412, 552, 902, 1139, 1610
ScrFI	CCNGG	8 cut(s)	240, 735, 736, 1002, 1028, 1147, 1590, 1634
SduI	GDGCHC	6 cut(s)	161, 543, 651, 663, 1290, 1633
SfaNI	GCATC	4 cut(s)	969, 1467, 1633, 1851
SfcI	CTRYAG	1 cut(s)	965
SfoI	GGCGCC	2 cut(s)	193, 1887
Sfr303I	CCGCGG	1 cut(s)	1876
SgrAI	CRCCGGYG	1 cut(s)	188
SgrBI	CCGCGG	1 cut(s)	1876
SinI	GGWCC	8 cut(s)	4, 139, 674, 1563, 1869, 1906, 1972, 2167
SmaI	CCCGGG	1 cut(s)	736
SmiMI	CAYNNNNRTG	1 cut(s)	1067
SmlI	CTYRAG	2 cut(s)	275, 1265
SmoI	CTYRAG	2 cut(s)	275, 1265
SpeI	ACTAGT	1 cut(s)	1537
Sse9I	AATT	9 cut(s)	208, 718, 812, 862, 1057, 1155, 1489, 1683, 1707
SspDI	GGCGCC	2 cut(s)	191, 1885
SspMI	CTAG	5 cut(s)	705, 711, 1538, 1568, 2275
SstI	GAGCTC	1 cut(s)	651
StyD4I	CCNGG	8 cut(s)	238, 733, 734, 1000, 1026, 1145, 1588, 1632
StyI	CCWWGG	4 cut(s)	1920, 1990, 2027, 2263
TaiI	ACGT	6 cut(s)	671, 834, 1094, 1428, 1932, 2067
TaqII	GACCGA	1 cut(s)	350
TasI	AATT	9 cut(s)	208, 718, 812, 862, 1057, 1155, 1489, 1683, 1707
TatI	WGTACW	4 cut(s)	1166, 1227, 1236, 1932
TauI	GCSGC	5 cut(s)	54, 257, 1123, 1126, 1437
TfiI	GAWTC	3 cut(s)	927, 1339, 1657
Tru1I	TTAA	4 cut(s)	299, 1233, 1758, 2052
Tru9I	TTAA	4 cut(s)	299, 1233, 1758, 2052
TseFI	GTSAC	1 cut(s)	1459
TseI	GCWGC	5 cut(s)	964, 967, 1078, 1178, 1319
Tsp45I	GTSAC	1 cut(s)	1459
TspDTI	ATGAA	4 cut(s)	377, 511, 919, 2075
TspGWI	ACGGA	6 cut(s)	1050, 1088, 1403, 1489, 1622, 2249
TspMI	CCCGGG	1 cut(s)	734
VneI	GTGCAC	1 cut(s)	659
VpaK11BI	GGWCC	8 cut(s)	4, 139, 674, 1563, 1869, 1906, 1972, 2167
XapI	RAATTY	1 cut(s)	812
XcmI	CCANNNNNNNNNTGG	1 cut(s)	133
XmaI	CCCGGG	1 cut(s)	734
XmiI	GTMKAC	1 cut(s)	910
XspI	CTAG	5 cut(s)	705, 711, 1538, 1568, 2275
Zsp2I	ATGCAT	1 cut(s)	2097

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.