Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0015611

Physical Location & Seq

Genomic Coordinates Forward (+)

66494617 .. 66497507

Gene Structure 2891 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG421100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2475 bp

ATGCGATCGTATCAGCCTCACCTTCCCGAGTTGATATACAAAACCAAATCTGCCTACCATATCTCCAGATTCTACTCAATCCCCAAAACCATGTCTACCTTCTTCCTCTTCCTCCTCCTCTTCATCTTCACCATCTCAAACCCGCCACCCTCCTCCGCCGAACAAACCCTCTCCTTCTCCGTCTCCGACTCCCCATGGACCCCACAAAGCAACCTCACCCTCCTCTCCCCCAACTCCCACTTCGCCGCCGGCTTCCTCCACCTCCCTTCTTCCCCAAACCTCTTCAACTTCTCCATCTGGTTCCGCAACACCTCCGCCCCAAACGTCGTCTGGTCCACCAACCCCCCGCTGGGCCCCTCCGCTACTCTCTCCATCAACTCCACCGGCGCCCTCCGCCTCTCCAACTCCTCCTCCTCCTCCGGTCAAAACCTCTTGCCAGGAACCGCCTCCGCCGCTCGAAACACCACCCAACTCAAGCTCCGAAACGACGGTAATTTAATCTGCGGTAATTGGGATAGCTTCGCCTTCCCGACCGACACCGTATTACCAAACCAATCCATGGAAGGAAACATCACGCTCGTCTCCAAAAACGGCAAGTTCCGGTTCACCAACTCGACTCAGCTCGTCTTCAACCTCACCGAACAGTACCAGGACCTGAAAGACGCCTTCGAGAACCTCGACTTCGACGGCAAGATGACGCAGGCAAACGGCGCGTCGTTCATCGTCTCGGACTTCGGACTCAACCGCTCACGCAGACTCACCCTCGACAACGACGGCAACCTCCGCATTTACAGCTTCGATCCGAGTATTGCGGACTGGACAGTTGTCTGGCAGTCCGGCTACGAGCTCTGTCAGGTCCACGGCACGTGCGGACCCAACGCCATTTGCGTCAGCGACGGTACTAGCTCTAGTTATAACTGCGTCTGCCCGCCTGGGTTTCAACCAGTACCAAATGGAGCCATTGAAGACCAAGGATGTCAGAGGAAAATTCCCCTTTCCAAAAATACCAAATTTCTGAAGCTTGATTATGTCAACTTCACCGGCGGGTCAAACCAGACGAATTGGCCCGCAACTAACTTCAGCATATGCGAGTCAAGATGTCTGAGTAGAGCTAACTGTGAGGGATTCATGTTCAAATACGACGGCAAAGGCTACTGTGTGCTGCAGCTGGATCGGTTGCTGTACGGGTACTGGTCGCCGGGAACCGAAACCGCTATGTTTCTCCGGGTGGACGGAGCCGAAAAGGATCGGACCAATTTCACAGGCATGACGGAGCTGCTGGAGACGACGTGCCCGGTGCAGATTAGCCTCCCTCTGCCGCCGCAAGAGTCGAACGCAACCACCAGGAACATAATTATTATATGTACTCTGTTTGCTGCTGAGTTGATTTCTGGGGTGCTGTTCTTCTGGGCTTTTATCAAGAAGTACATAAAGTACAGAGACATGGCTCGGACGCTTGGGCTTGAGTTTCTTCCGGCCGGCGGGCCCAAGCGGTTTTCGTACGCCGAGCTGAAAGCAGCCACCAAAGACTTCTCGAATCTGATCGGGAGAGGTGGGTTTGGGGATGTTTACAGAGGAGAGCTGACGGATCAGAGGGTGGTGGCGGTCAAGTGTTTGAAACACGTGGCCGGCGGCGACGCCGAGTTTTGGGCGGAGGTGACAATTATTGCAAGGATGCACCACCTCAATTTGGTGAGGTTGTGGGGCTTCTGCGCGGAGAAAGGTCAGAGAATACTAGTCTATGAGTATGTTCCAAATGGGTCCCTGGACAAGTACCTTTTCCAACCGGGTCGGGTTTTGTCTACGGATCAGGACTCGGAAAATGGAGCCCCGGTGGCAGATGCAGAGAAGCCGATTCTTGATTGGGGAATAAGGTACCGAATTTCGCTGGGAGTGGCGAGATCAATTGCTTATTTGCACGAGGAGTGTCTCGAATGGGTTTTGCATTGTGATATTAAGCCGGAAAATATACTTCTCGGCGACGACTTTTGCCCGAAAATATCGGACTTCGGGTTGGCGAAGCTGAAGAAGAAGGAGGACATGGTGAGCATATCGCGGATGCAGGGGACCCGTGGGTACATGGCGCCTGAGTGGGTCAAGATGGACCCGATCACACCCAAGGCTGACGTGTACAGCTTCGGAATGGTGCTGTTGGAGCTTGTGAGTGGGGTCCGGAATAACGAGATCCAAGGGTCGATGATAGAGAGCGAGGATTGGTATTTTCCGAGGTGGGCGTTTGATAAGGTGTTTAAGGAGATGAACGTGGAGGACATTCTCGACCGTCGGATCATGCATTGTTACGATAGCAAGGCGCATTTTGATACGGTGAACCGAATGGTGAAGACGGCAATGTGGTGCCTTCAGGACCGGCCGGAGATGAGGCCGTCGATGGGGAAGGTGGCTAAGATGTTGGAAGGGACGGTGGATATCACGGAACCTAAAAAGCCCACTATATTTTTCCTTAGCGACGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin PAN_2 Pkinase S_locus_glycop

Protein Analysis

824

Amino Acids

92.53

Weight (kDa)

6.36

Isoelectric Point (pI)

36.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	115 - 190	4.3e-06	D-mannose binding lectin
S_locus_glycop	PF00954	246 - 315	1.6e-10	S-locus glycoprotein domain
PK_Tyr_Ser-Thr	PF07714	512 - 803	3.9e-41	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	513 - 800	7.1e-42	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0015611)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g33230
malus_domestica	MD16G1015600.v1.1
prunus_persica	Prupe.1G336000_v2.0.a1
pyrus_communis	pycom15g28260 pycom16g01450
rosa_chinensis	RchiOBHm_Chr4g0442381
rosa_laevigata	RLG00000006014
rosa_multiflora	Rmu_co8314767.1_g000001 Rmu_co8434117.1_g000001 Rmu_sc0000124.1_g000043
rosa_roxburghii	Rroxscaffold_5G00383230
rosa_rugosa	Rorug04G0340700
rosa_samantha	Rh4AG392300 Rh4BG406000 Rh4CG421100 Rh4DG399100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	915
Acc65I	GGTACC	1 cut(s)	1875
AccB1I	GGYRCC	4 cut(s)	386, 1875, 2083, 2355
AccB7I	CCANNNNNTGG	1 cut(s)	559
AccBSI	CCGCTC	2 cut(s)	455, 747
AccI	GTMKAC	2 cut(s)	95, 1802
AccII	CGCG	3 cut(s)	713, 1715, 2056
AccIII	TCCGGA	1 cut(s)	2172
AclWI	GGATC	7 cut(s)	794, 1179, 1254, 1596, 1815, 2179, 2294
AcoI	YGGCCR	3 cut(s)	1476, 1626, 2369
AcsI	RAATTY	3 cut(s)	987, 1010, 1881
AcuI	CTGAAG	4 cut(s)	1037, 1063, 2045, 2345
AcvI	CACGTG	2 cut(s)	867, 1624
AcyI	GRCGYC	4 cut(s)	387, 663, 1638, 2084
AfiI	CCNNNNNNNGG	7 cut(s)	349, 350, 559, 1481, 1647, 1690, 2390
AflIII	ACRYGT	2 cut(s)	1621, 2127
AgsI	TTSAA	6 cut(s)	286, 631, 941, 965, 1135, 1618
AhlI	ACTAGT	1 cut(s)	1735
AjiI	CACGTC	2 cut(s)	1290, 2128
AjnI	CCWGG	5 cut(s)	436, 648, 931, 1343, 1764
AjuI	GAANNNNNNNTTGG	2 cut(s)	224, 256
Alw21I	GWGCWC	1 cut(s)	849
Alw26I	GTCTC	6 cut(s)	187, 586, 730, 1277, 1434, 1934
AlwI	GGATC	7 cut(s)	794, 1179, 1254, 1596, 1815, 2179, 2294
AlwNI	CAGNNNCTG	1 cut(s)	655
Ama87I	CYCGRG	1 cut(s)	26
Aor13HI	TCCGGA	1 cut(s)	2172
AoxI	GGCC	7 cut(s)	352, 1064, 1476, 1484, 1626, 2369, 2381
ApaI	GGGCCC	2 cut(s)	356, 1488
ApeKI	GCWGC	5 cut(s)	1162, 1165, 1276, 1376, 1517
ApoI	RAATTY	3 cut(s)	987, 1010, 1881
ArsI	GACNNNNNNTTYG	2 cut(s)	698, 730
Asp718I	GGTACC	1 cut(s)	1875
AspLEI	GCGC	5 cut(s)	389, 713, 1715, 2086, 2314
AsuC2I	CCSGG	5 cut(s)	1200, 1226, 1295, 1788, 1832
AvaI	CYCGRG	1 cut(s)	26
BaeGI	GKGCMC	3 cut(s)	356, 1295, 1488
BanI	GGYRCC	4 cut(s)	386, 1875, 2083, 2355
BanII	GRGCYC	4 cut(s)	356, 849, 1488, 1831
BauI	CACGAG	1 cut(s)	1919
BbrPI	CACGTG	2 cut(s)	867, 1624
BbsI	GAAGAC	3 cut(s)	619, 972, 2348
Bbv12I	GWGCWC	1 cut(s)	849
BbvI	GCAGC	5 cut(s)	1149, 1177, 1263, 1363, 1529
BccI	CCATC	5 cut(s)	140, 302, 380, 2095, 2383
BceAI	ACGGC	8 cut(s)	607, 703, 724, 790, 877, 1159, 2361, 2368
BcgI	CGANNNNNNTGC	2 cut(s)	1154, 1188
BciT130I	CCWGG	5 cut(s)	438, 650, 933, 1345, 1766
BcnI	CCSGG	5 cut(s)	1200, 1226, 1295, 1788, 1832
BcoDI	GTCTC	6 cut(s)	187, 586, 730, 1277, 1434, 1934
BcuI	ACTAGT	1 cut(s)	1735
BfaI	CTAG	4 cut(s)	903, 909, 1736, 2473
BfmI	CTRYAG	1 cut(s)	1163
BfoI	RGCGCY	2 cut(s)	390, 2087
BglI	GCCNNNNNGGC	1 cut(s)	1835
BmeT110I	CYCGRG	1 cut(s)	26
BmgBI	CACGTC	2 cut(s)	1290, 2128
BmsI	GCATC	3 cut(s)	1665, 1831, 2049
BoxI	GACNNNNGTC	1 cut(s)	824
BpiI	GAAGAC	3 cut(s)	619, 972, 2348
BpmI	CTGGAG	2 cut(s)	49, 1301
Bpu10I	CCTNAGC	1 cut(s)	2462
BpuEI	CTTGAG	2 cut(s)	458, 1484
BpuMI	CCSGG	5 cut(s)	1200, 1226, 1295, 1788, 1832
BsaAI	YACGTR	2 cut(s)	867, 1624
BsaHI	GRCGYC	4 cut(s)	387, 663, 1638, 2084
BsaWI	WCCGGW	3 cut(s)	419, 600, 2172
Bsc4I	CCNNNNNNNGG	7 cut(s)	349, 350, 559, 1481, 1647, 1690, 2390
Bse118I	RCCGGY	6 cut(s)	248, 383, 1040, 1478, 1628, 2367
Bse1I	ACTGG	3 cut(s)	821, 944, 1196
Bse3DI	GCAATG	1 cut(s)	2355
BseAI	TCCGGA	1 cut(s)	2172
BseBI	CCWGG	5 cut(s)	438, 650, 933, 1345, 1766
BseGI	GGATG	4 cut(s)	980, 1570, 1680, 2064
BseLI	CCNNNNNNNGG	7 cut(s)	349, 350, 559, 1481, 1647, 1690, 2390
BseMI	GCAATG	1 cut(s)	2355
BseMII	CTCAG	4 cut(s)	632, 1094, 1371, 2079
BseNI	ACTGG	3 cut(s)	821, 944, 1196
BseSI	GKGCMC	3 cut(s)	356, 1295, 1488
BseX3I	CGGCCG	2 cut(s)	1476, 2369
BseXI	GCAGC	5 cut(s)	1149, 1177, 1263, 1363, 1529
BseYI	CCCAGC	2 cut(s)	349, 1888
BsgI	GTGCAG	1 cut(s)	1319
Bsh1236I	CGCG	3 cut(s)	713, 1715, 2056
Bsh1285I	CGRYCG	5 cut(s)	8, 534, 1479, 2281, 2372
BshFI	GGCC	7 cut(s)	354, 1066, 1478, 1486, 1628, 2371, 2383
BshNI	GGYRCC	4 cut(s)	386, 1875, 2083, 2355
BsiEI	CGRYCG	5 cut(s)	8, 534, 1479, 2281, 2372
BsiHKAI	GWGCWC	1 cut(s)	849
BsiHKCI	CYCGRG	1 cut(s)	26
BsiWI	CGTACG	1 cut(s)	1500
BslFI	GGGAC	3 cut(s)	1747, 2080, 2431
BslI	CCNNNNNNNGG	7 cut(s)	349, 350, 559, 1481, 1647, 1690, 2390
BsmAI	GTCTC	6 cut(s)	187, 586, 730, 1277, 1434, 1934
BsmBI	CGTCTC	4 cut(s)	187, 586, 730, 1277
BsmFI	GGGAC	3 cut(s)	1747, 2080, 2431
BsnI	GGCC	7 cut(s)	354, 1066, 1478, 1486, 1628, 2371, 2383
BsoBI	CYCGRG	1 cut(s)	26
Bsp120I	GGGCCC	2 cut(s)	352, 1484
Bsp1286I	GDGCHC	5 cut(s)	356, 849, 1295, 1488, 1831
Bsp13I	TCCGGA	1 cut(s)	2172
Bsp1407I	TGTACA	1 cut(s)	2130
Bsp19I	CCATGG	2 cut(s)	194, 558
BspANI	GGCC	7 cut(s)	354, 1066, 1478, 1486, 1628, 2371, 2383
BspCNI	CTCAG	4 cut(s)	631, 1095, 1372, 2080
BspEI	TCCGGA	1 cut(s)	2172
BspFNI	CGCG	3 cut(s)	713, 1715, 2056
BspMAI	CTGCAG	1 cut(s)	1167
BspPI	GGATC	7 cut(s)	794, 1179, 1254, 1596, 1815, 2179, 2294
BspT107I	GGYRCC	4 cut(s)	386, 1875, 2083, 2355
BsrBI	CCGCTC	2 cut(s)	455, 747
BsrDI	GCAATG	1 cut(s)	2355
BsrFI	RCCGGY	6 cut(s)	248, 383, 1040, 1478, 1628, 2367
BsrGI	TGTACA	1 cut(s)	2130
BsrI	ACTGG	3 cut(s)	821, 944, 1196
BssAI	RCCGGY	6 cut(s)	248, 383, 1040, 1478, 1628, 2367
BssNI	GRCGYC	4 cut(s)	387, 663, 1638, 2084
BssSI	CACGAG	1 cut(s)	1919
BssT1I	CCWWGG	5 cut(s)	194, 558, 970, 2118, 2188
Bst2BI	CACGAG	1 cut(s)	1919
Bst2UI	CCWGG	5 cut(s)	438, 650, 933, 1345, 1766
Bst6I	CTCTTC	3 cut(s)	113, 125, 287
BstACI	GRCGYC	4 cut(s)	387, 663, 1638, 2084
BstAUI	TGTACA	1 cut(s)	2130
BstBAI	YACGTR	2 cut(s)	867, 1624
BstC8I	GCNNGC	7 cut(s)	250, 702, 929, 1068, 1480, 1484, 1630
BstDEI	CTNAG	6 cut(s)	618, 1103, 1380, 2088, 2403, 2462
BstDSI	CCRYGG	4 cut(s)	194, 558, 859, 2071
BstF5I	GGATG	4 cut(s)	980, 1570, 1680, 2064
BstFNI	CGCG	3 cut(s)	713, 1715, 2056
BstH2I	RGCGCY	2 cut(s)	390, 2087
BstHHI	GCGC	5 cut(s)	389, 713, 1715, 2086, 2314
BstMAI	GTCTC	6 cut(s)	187, 586, 730, 1277, 1434, 1934
BstMCI	CGRYCG	5 cut(s)	8, 534, 1479, 2281, 2372
BstMWI	GCNNNNNNNGC	7 cut(s)	393, 452, 710, 783, 792, 1835, 2155
BstNI	CCWGG	5 cut(s)	438, 650, 933, 1345, 1766
BstPAI	GACNNNNGTC	1 cut(s)	824
BstSFI	CTRYAG	1 cut(s)	1163
BstSLI	GKGCMC	3 cut(s)	356, 1295, 1488
BstUI	CGCG	3 cut(s)	713, 1715, 2056
BstV1I	GCAGC	5 cut(s)	1149, 1177, 1263, 1363, 1529
BstV2I	GAAGAC	3 cut(s)	619, 972, 2348
BstX2I	RGATCY	1 cut(s)	2184
BstYI	RGATCY	1 cut(s)	2184
BstZI	CGGCCG	2 cut(s)	1476, 2369
BsuRI	GGCC	7 cut(s)	354, 1066, 1478, 1486, 1628, 2371, 2383
BtgI	CCRYGG	4 cut(s)	194, 558, 859, 2071
BtrI	CACGTC	2 cut(s)	1290, 2128
BtsCI	GGATG	4 cut(s)	980, 1570, 1680, 2064
Cac8I	GCNNGC	7 cut(s)	250, 702, 929, 1068, 1480, 1484, 1630
CaiI	CAGNNNCTG	1 cut(s)	655
CfoI	GCGC	5 cut(s)	389, 713, 1715, 2086, 2314
Cfr10I	RCCGGY	6 cut(s)	248, 383, 1040, 1478, 1628, 2367
CseI	GACGC	7 cut(s)	671, 702, 706, 877, 910, 1462, 1646
CviAII	CATG	9 cut(s)	91, 195, 559, 1129, 1267, 1444, 2041, 2080, 2290
DdeI	CTNAG	6 cut(s)	618, 1103, 1380, 2088, 2403, 2462
DinI	GGCGCC	2 cut(s)	388, 2085
EaeI	YGGCCR	3 cut(s)	1476, 1626, 2369
EagI	CGGCCG	2 cut(s)	1476, 2369
Eam1104I	CTCTTC	3 cut(s)	113, 125, 287
EarI	CTCTTC	3 cut(s)	113, 125, 287
EciI	GGCGGA	5 cut(s)	145, 304, 383, 439, 1667
Ecl136II	GAGCTC	1 cut(s)	847
EclXI	CGGCCG	2 cut(s)	1476, 2369
Eco130I	CCWWGG	5 cut(s)	194, 558, 970, 2118, 2188
Eco24I	GRGCYC	4 cut(s)	356, 849, 1488, 1831
Eco32I	GATATC	1 cut(s)	2428
Eco52I	CGGCCG	2 cut(s)	1476, 2369
Eco53kI	GAGCTC	1 cut(s)	847
Eco57I	CTGAAG	4 cut(s)	1037, 1063, 2045, 2345
Eco72I	CACGTG	2 cut(s)	867, 1624
Eco88I	CYCGRG	1 cut(s)	26
EcoICRI	GAGCTC	1 cut(s)	847
EcoO109I	RGGNCCY	4 cut(s)	353, 652, 1761, 2067
EcoRII	CCWGG	5 cut(s)	436, 648, 931, 1343, 1764
EcoRV	GATATC	1 cut(s)	2428
EcoT14I	CCWWGG	5 cut(s)	194, 558, 970, 2118, 2188
EcoT22I	ATGCAT	1 cut(s)	2295
EcoT38I	GRGCYC	4 cut(s)	356, 849, 1488, 1831
EgeI	GGCGCC	2 cut(s)	388, 2085
EheI	GGCGCC	2 cut(s)	388, 2085
ErhI	CCWWGG	5 cut(s)	194, 558, 970, 2118, 2188
Esp3I	CGTCTC	4 cut(s)	187, 586, 730, 1277
FaeI	CATG	9 cut(s)	94, 198, 562, 1132, 1270, 1447, 2044, 2083, 2293
FaqI	GGGAC	3 cut(s)	1747, 2080, 2431
FatI	CATG	9 cut(s)	90, 194, 558, 1128, 1266, 1443, 2040, 2079, 2289
FauI	CCCGC	6 cut(s)	150, 354, 936, 1037, 1075, 1475
FauNDI	CATATG	1 cut(s)	1085
FblI	GTMKAC	2 cut(s)	95, 1802
FokI	GGATG	4 cut(s)	987, 1577, 1687, 2071
FriOI	GRGCYC	4 cut(s)	356, 849, 1488, 1831
FspBI	CTAG	4 cut(s)	903, 909, 1736, 2473
GlaI	GCGC	5 cut(s)	388, 712, 1714, 2085, 2313
GsaI	CCCAGC	2 cut(s)	353, 1892
GsuI	CTGGAG	2 cut(s)	49, 1301
HaeII	RGCGCY	2 cut(s)	390, 2087
HaeIII	GGCC	7 cut(s)	354, 1066, 1478, 1486, 1628, 2371, 2383
HgaI	GACGC	7 cut(s)	671, 702, 706, 877, 910, 1462, 1646
HhaI	GCGC	5 cut(s)	389, 713, 1715, 2086, 2314
Hin1I	GRCGYC	4 cut(s)	387, 663, 1638, 2084
Hin1II	CATG	9 cut(s)	94, 198, 562, 1132, 1270, 1447, 2044, 2083, 2293
Hin6I	GCGC	5 cut(s)	387, 711, 1713, 2084, 2312
HinP1I	GCGC	5 cut(s)	387, 711, 1713, 2084, 2312
HincII	GTYRAC	1 cut(s)	1033
HindII	GTYRAC	1 cut(s)	1033
HindIII	AAGCTT	1 cut(s)	1019
HpyCH4IV	ACGT	6 cut(s)	324, 866, 1289, 1623, 2127, 2262
HpyCH4V	TGCA	9 cut(s)	1165, 1300, 1670, 1678, 1844, 1918, 1945, 2062, 2293
HpyF10VI	GCNNNNNNNGC	7 cut(s)	393, 452, 710, 783, 792, 1835, 2155
HpyF3I	CTNAG	6 cut(s)	618, 1103, 1380, 2088, 2403, 2462
HpySE526I	ACGT	6 cut(s)	324, 866, 1289, 1623, 2127, 2262
Hsp92I	GRCGYC	4 cut(s)	387, 663, 1638, 2084
Hsp92II	CATG	9 cut(s)	94, 198, 562, 1132, 1270, 1447, 2044, 2083, 2293
HspAI	GCGC	5 cut(s)	387, 711, 1713, 2084, 2312
KasI	GGCGCC	2 cut(s)	386, 2083
KflI	GGGWCCC	2 cut(s)	1761, 2067
Kpn2I	TCCGGA	1 cut(s)	2172
KpnI	GGTACC	1 cut(s)	1879
KroI	GCCGGC	3 cut(s)	248, 1478, 1628
KroNI	GCCGGC	3 cut(s)	250, 1480, 1630
LmnI	GCTCC	6 cut(s)	483, 956, 1235, 1273, 1826, 2155
Lsp1109I	GCAGC	5 cut(s)	1149, 1177, 1263, 1363, 1529
LweI	GCATC	3 cut(s)	1665, 1831, 2049
MaeI	CTAG	4 cut(s)	903, 909, 1736, 2473
MaeII	ACGT	6 cut(s)	324, 866, 1289, 1623, 2127, 2262
MaeIII	GTNAC	2 cut(s)	1657, 2297
MbiI	CCGCTC	2 cut(s)	455, 747
MfeI	CAATTG	1 cut(s)	1905
MflI	RGATCY	1 cut(s)	2184
MhlI	GDGCHC	5 cut(s)	356, 849, 1295, 1488, 1831
Mly113I	GGCGCC	2 cut(s)	387, 2084
MlyI	GAGTC	7 cut(s)	182, 610, 732, 750, 1100, 1337, 1808
MmeI	TCCRAC	6 cut(s)	210, 426, 1807, 2133, 2264, 2391
Mph1103I	ATGCAT	1 cut(s)	2295
MroI	TCCGGA	1 cut(s)	2172
MroNI	GCCGGC	3 cut(s)	248, 1478, 1628
MseI	TTAA	3 cut(s)	497, 1956, 2250
MslI	CAYNNNNRTG	1 cut(s)	1265
MspA1I	CMGCKG	2 cut(s)	349, 1168
MunI	CAATTG	1 cut(s)	1905
MvaI	CCWGG	5 cut(s)	438, 650, 933, 1345, 1766
MvnI	CGCG	3 cut(s)	713, 1715, 2056
MwoI	GCNNNNNNNGC	7 cut(s)	393, 452, 710, 783, 792, 1835, 2155
NaeI	GCCGGC	3 cut(s)	250, 1480, 1630
NarI	GGCGCC	2 cut(s)	387, 2084
NciI	CCSGG	5 cut(s)	1200, 1226, 1295, 1788, 1832
NcoI	CCATGG	2 cut(s)	194, 558
NdeI	CATATG	1 cut(s)	1085
NgoMIV	GCCGGC	3 cut(s)	248, 1478, 1628
NlaIII	CATG	9 cut(s)	94, 198, 562, 1132, 1270, 1447, 2044, 2083, 2293
NmeAIII	GCCGAG	3 cut(s)	1531, 1666, 1956
NmuCI	GTSAC	1 cut(s)	1657
NsiI	ATGCAT	1 cut(s)	2295
PcsI	WCGNNNNNNNCGW	2 cut(s)	675, 885
PdiI	GCCGGC	3 cut(s)	250, 1480, 1630
PfeI	GAWTC	4 cut(s)	69, 1125, 1537, 1855
Pfl23II	CGTACG	1 cut(s)	1500
PflMI	CCANNNNNTGG	1 cut(s)	559
Ple19I	CGATCG	1 cut(s)	8
PleI	GAGTC	7 cut(s)	182, 610, 732, 750, 1099, 1336, 1808
PluTI	GGCGCC	2 cut(s)	390, 2087
PmaCI	CACGTG	2 cut(s)	867, 1624
PmlI	CACGTG	2 cut(s)	867, 1624
PpsI	GAGTC	7 cut(s)	182, 610, 732, 750, 1099, 1336, 1808
Ppu21I	YACGTR	2 cut(s)	867, 1624
PpuMI	RGGWCCY	3 cut(s)	652, 1761, 2067
PshAI	GACNNNNGTC	1 cut(s)	824
PsiI	TTATAA	1 cut(s)	915
Psp124BI	GAGCTC	1 cut(s)	849
Psp5II	RGGWCCY	3 cut(s)	652, 1761, 2067
Psp6I	CCWGG	5 cut(s)	436, 648, 931, 1343, 1764
PspCI	CACGTG	2 cut(s)	867, 1624
PspFI	CCCAGC	2 cut(s)	349, 1888
PspGI	CCWGG	5 cut(s)	436, 648, 931, 1343, 1764
PspLI	CGTACG	1 cut(s)	1500
PspOMI	GGGCCC	2 cut(s)	352, 1484
PspPPI	RGGWCCY	3 cut(s)	652, 1761, 2067
PstI	CTGCAG	1 cut(s)	1167
PstNI	CAGNNNCTG	1 cut(s)	655
PsuI	RGATCY	1 cut(s)	2184
PvuI	CGATCG	1 cut(s)	8
PvuII	CAGCTG	1 cut(s)	1168
RseI	CAYNNNNRTG	1 cut(s)	1265
SacI	GAGCTC	1 cut(s)	849
SaqAI	TTAA	3 cut(s)	497, 1956, 2250
SchI	GAGTC	7 cut(s)	182, 610, 732, 750, 1100, 1337, 1808
SduI	GDGCHC	5 cut(s)	356, 849, 1295, 1488, 1831
SfaNI	GCATC	3 cut(s)	1665, 1831, 2049
SfcI	CTRYAG	1 cut(s)	1163
SfoI	GGCGCC	2 cut(s)	388, 2085
SgrAI	CRCCGGYG	2 cut(s)	383, 1040
SmiMI	CAYNNNNRTG	1 cut(s)	1265
SmlI	CTYRAG	2 cut(s)	473, 1463
SmoI	CTYRAG	2 cut(s)	473, 1463
SpeI	ACTAGT	1 cut(s)	1735
SspDI	GGCGCC	2 cut(s)	386, 2083
SspMI	CTAG	4 cut(s)	903, 909, 1736, 2473
SstI	GAGCTC	1 cut(s)	849
StyI	CCWWGG	5 cut(s)	194, 558, 970, 2118, 2188
TaiI	ACGT	6 cut(s)	327, 869, 1292, 1626, 2130, 2265
TaqII	GACCGA	1 cut(s)	548
TatI	WGTACW	4 cut(s)	1364, 1425, 1434, 2130
TauI	GCSGC	5 cut(s)	248, 455, 1321, 1324, 1635
TfiI	GAWTC	4 cut(s)	69, 1125, 1537, 1855
Tru1I	TTAA	3 cut(s)	497, 1956, 2250
Tru9I	TTAA	3 cut(s)	497, 1956, 2250
TseFI	GTSAC	1 cut(s)	1657
TseI	GCWGC	5 cut(s)	1162, 1165, 1276, 1376, 1517
Tsp45I	GTSAC	1 cut(s)	1657
TspDTI	ATGAA	4 cut(s)	112, 709, 1117, 2273
TspGWI	ACGGA	6 cut(s)	169, 1248, 1286, 1601, 1820, 2447
Van91I	CCANNNNNTGG	1 cut(s)	559
XapI	RAATTY	3 cut(s)	987, 1010, 1881
XcmI	CCANNNNNNNNNTGG	2 cut(s)	327, 346
XmiI	GTMKAC	2 cut(s)	95, 1802
XspI	CTAG	4 cut(s)	903, 909, 1736, 2473
Zsp2I	ATGCAT	1 cut(s)	2295

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.