Rroxscaffold_5G00383630

RNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0016319
Physical Location & Seq
Forward (+)
63231697 .. 63244456
12760 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00383630.1

Sequence Viewer

Length: 2574 bp
ATGTCAGCCCTCCGGGAACGGTCTCTCCACATCGCCGATTTGCAGGCGTGGATGGACAAGGCGTACTTCGTTAATGACTGCTTCCCAGAGTTTAAGGGAGAGATTGTGAGTGCAAAGTTTATTGTTGAGAAATCGGGTTACTGCTATGGTTTTCTGGAGTTTAGGTCTCACAAGGTAGCGAAGCTTGTTCTGGAGACATACAATGGCAAGCAGATGCCCAAGGCGTGTCAACATTTCCGTCTCAATTGGAGCAGGTCCACGAGGGCATTGCAAACTACAGATGCTTCTCAAGGAGGGAATTACAAGCTTGTAGTTGCTGGGGATCTGCCGAAGGATGTTACTGCTGAAGAACTGCAGCAGCACTTTAGAACCTATTACCCTTCAGTTAAGGATGCTGAAGTTCACACCAGTGAATCCCAGGGGTTGTATGGTGTTATTACATTTGCAAAAGAGCATGAAAGGCATCTGGCCTCAATTCATATGGACATGCAATGTTTTAGGAGGAAAGAAGACGGCAAACCGCATCATTTCTTCTATAAAGACACAGCTGCTGAGTACCAGATAGCTGCCTACCCAAGTACCCATCCAGAGGATGCACATCCAAATGGTTCAACAGTAAATTTACATTCAAAACTTGGAAAAGGATGTTACCGAAGGGTTCTTGCTATGGAAATTTTCCCCTATGGTGAGGTTTCTAAAGTCACCATAAGGGGATGTGCTCTTATTCAGTTTGTTGATAGATCGAGTGCCGATAAAGCATTGCTTCACCTGAATGATGGCCTCATTCTGCAGAATAGCTTACTTACACTGACCATGAGAAAATCAAATGATGAATCTGTTCCAGTAGCTTCATCTGTTGAAGACTTCAAGGAACTAACAGAGCTTAAGGAATTAACCCATGAAGATGAAAGATCAGTATCTGGGTTCAAAGTGTGTGAAGTCGATTCGTCCTCGTTGGAAATGGCAGACCGCCATTCCCCGTCTCTCCACATCGCTGATTTGCAGGCCTGGATGGACAAGCCCTACTTGCGGGACGAGTGCTTCCCAAAGTTTCCGGGAGAGGTTATGAGTGCTAGCATTTTTGTTGAGAAAAGTGGTTATCGCTATGGTTTTCTGGAGTTTAGGTCTCCTGAGGTAGCAGAGCTTGTACGCAAGACGTACAATGGCAAGAGGATGCCCAAGGCGTGTCAATATTTCCGTCTCAATAGGAACAGGTCCAAGAGACCACCGGGAACTATGGCTGCACCTGAAGAAGGGAATTACAAGCTTGTAGTTGATGGGGATTTGCCGAAGGATGTTACTACTGAAGAACTGCAGCAGCACTTTAGAACCTATTACCCTTCAGTTAAGGATGCTGAAGTTCACACCAGTGAATCCCAGGGGTTGTATGGTGTTATTACATTTGCAAAGGAGCATGAAAGGGATCTAGCATCAATTCATATGGCCAGTCAATGTTTTAGGAGGACAGAAGACGGCAAACCGCATCATTTCTTCTATAAAGATACAGCTGCTGAGTACCAGAGAGCTGCCTACCCAAGTACCCATCCAGAGGATGCACATCCAAATGGTTCAAAAATTTACATTCAAAACTTGGAAATGGATGTCACTAAAGGGTTCTTGCTACGGAAATTTTCTCCCTATGGTGAGGTTTCTAAAATCACCATAAGGGGATGTGCTCTGATTCAGTTTGTTGATAGATCGAGTGCTGATAAAGCATTGCTTCACATGAATGATGACCTCATTCTGCAGAATAGCTTACTTCCACTGACCGTGAGAAAATCAAATGATGAATCTGTTCCAGTAGCTTCATCTGTTGAAGACTTCAAGGAACTAACAGAGCTTAAGGAATTAACCCATGAAGATGAAAGATCAGTATCTGGGTTCAGAGCGTGTGAGGAGGAGTCCACAGATGAAAAAATAACAGAGGAGAGGAAGCAAGAAAATGATGAATCTGTTCCAGTAGCTTCAGCTGTAGAAGATCTTGAGGAACTAACACATGGAGAATCACCGAAAGACCTTAAGGAATTAACCCATGACGATGAAGGATCAGTATCTGGGTTTAGAACGTGTGAGGAGGAGTCCACAGATGAAATAACAGACGAGGGGAGGCAAGAAAATGATGAATCTGTTCCAGTAGCTTCATCTGTAGAAGACCTTGAAGAACAAAAACATGGAGAATCACCGAAAGACCGTAAGGAATTAACCCATGAAGATGAAGGATTAGTATCTGGGTTCAGAACGTGTGAGGAGGAGCCCACAGATGAAAAAATAACAGAGGAGGGGAAGCAAGAAGAGGAGGTGAAAAAAGTCAGAAGGGCAAAGACGGAGGTTAGTGAAGGACAGAGACGGAGGAGGAAGGCGAAGAAGGCAAGGCAGAAGGAGAAAAAGAAGCTTCTTAAGCAAACCGATGAACGGTTGGAGGCATCAGAAGGGCAGCAAACCAATGAAGGGTTTGAAGCACCAGAAGGGCAGCAAACCAATGAAGGCTCGCAAGCATCAGAAGGGCATCAATTGGTCATCTCTTGGCTGTGGGAGTTGTATGCGAGCCTGAAGCACTACTTGTTCGGCTGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RRM_1

Protein Analysis

857

Amino Acids

97.66

Weight (kDa)

5.41

Isoelectric Point (pI)

51.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 526 - 584 6.6e-07 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 243
AciI CCGC 4 cut(s) 521, 970, 1030, 1481
AclWI GGATC 3 cut(s) 330, 1431, 2053
AcoI YGGCCR 1 cut(s) 1443
AcsI RAATTY 4 cut(s) 619, 672, 1575, 1628
AcuI CTGAAG 9 cut(s) 366, 366, 417, 1269, 1326, 1326, 1377, 1950, 2570
AfaI GTAC 7 cut(s) 65, 557, 580, 1149, 1160, 1517, 1540
AfiI CCNNNNNNNGG 6 cut(s) 589, 1029, 1253, 1549, 2412, 2448
AflII CTTAAG 4 cut(s) 884, 1841, 2018, 2396
AflIII ACRYGT 2 cut(s) 2066, 2240
AjnI CCWGG 3 cut(s) 417, 1007, 1377
AleI CACNNNNGTG 2 cut(s) 408, 1368
AloI GAACNNNNNNTCC 2 cut(s) 9, 41
Alw21I GWGCWC 2 cut(s) 721, 1678
Alw26I GTCTC 9 cut(s) 27, 171, 188, 245, 987, 1131, 1205, 1216, 2338
AlwI GGATC 3 cut(s) 330, 1431, 2053
AlwNI CAGNNNCTG 5 cut(s) 551, 920, 1511, 1877, 2054
AoxI GGCC 4 cut(s) 468, 778, 1005, 1443
ApoI RAATTY 4 cut(s) 619, 672, 1575, 1628
Asp700I GAANNNNTTC 4 cut(s) 837, 1794, 1953, 2127
AspS9I GGNCC 2 cut(s) 255, 1215
AsuC2I CCSGG 3 cut(s) 14, 1056, 1230
AsuHPI GGTGA 8 cut(s) 694, 698, 758, 1651, 1655, 1998, 2172, 2311
AsuNHI GCTAGC 1 cut(s) 1073
AvaII GGWCC 2 cut(s) 255, 1215
AxyI CCTNAGG 1 cut(s) 1131
BaeI ACNNNNGTAYC 4 cut(s) 562, 595, 1522, 1555
BalI TGGCCA 1 cut(s) 1445
BanII GRGCYC 1 cut(s) 2256
BauI CACGAG 1 cut(s) 259
BbsI GAAGAC 5 cut(s) 516, 867, 1476, 1824, 2157
Bbv12I GWGCWC 2 cut(s) 721, 1678
BccI CCATC 6 cut(s) 46, 591, 770, 1006, 1271, 1551
BceAI ACGGC 2 cut(s) 529, 1489
BcgI CGANNNNNNTGC 2 cut(s) 250, 284
BciT130I CCWGG 3 cut(s) 419, 1009, 1379
BcnI CCSGG 3 cut(s) 14, 1056, 1230
BcoDI GTCTC 9 cut(s) 27, 171, 188, 245, 987, 1131, 1205, 1216, 2338
BfaI CTAG 2 cut(s) 1074, 1427
BfmI CTRYAG 7 cut(s) 276, 353, 788, 1313, 1745, 1971, 2145
BfrI CTTAAG 4 cut(s) 884, 1841, 2018, 2396
BfuAI ACCTGC 1 cut(s) 243
BglII AGATCT 1 cut(s) 1978
Bme1390I CCNGG 6 cut(s) 14, 419, 1009, 1056, 1230, 1379
Bme18I GGWCC 2 cut(s) 255, 1215
BmgT120I GGNCC 2 cut(s) 255, 1215
BmiI GGNNCC 1 cut(s) 2253
BmrFI CCNGG 6 cut(s) 14, 419, 1009, 1056, 1230, 1379
BmtI GCTAGC 1 cut(s) 1077
BpiI GAAGAC 5 cut(s) 516, 867, 1476, 1824, 2157
BpmI CTGGAG 3 cut(s) 176, 212, 1136
BpuEI CTTGAG 2 cut(s) 273, 2003
BpuMI CCSGG 3 cut(s) 14, 1056, 1230
BsaBI GATNNNNATC 6 cut(s) 597, 916, 1557, 1873, 2050, 2224
BsaI GGTCTC 4 cut(s) 27, 171, 1131, 1216
BsaJI CCNNGG 6 cut(s) 219, 417, 418, 1179, 1377, 1378
BsaXI ACNNNNNCTCC 8 cut(s) 9, 39, 90, 120, 149, 179, 1109, 1139
Bsc4I CCNNNNNNNGG 6 cut(s) 589, 1029, 1253, 1549, 2412, 2448
Bse1I ACTGG 7 cut(s) 408, 842, 1368, 1446, 1799, 1958, 2132
Bse21I CCTNAGG 1 cut(s) 1131
Bse3DI GCAATG 4 cut(s) 266, 497, 758, 1715
Bse8I GATNNNNATC 6 cut(s) 597, 916, 1557, 1873, 2050, 2224
BseBI CCWGG 3 cut(s) 419, 1009, 1379
BseDI CCNNGG 6 cut(s) 219, 417, 418, 1179, 1377, 1378
BseJI GATNNNNATC 6 cut(s) 597, 916, 1557, 1873, 2050, 2224
BseLI CCNNNNNNNGG 6 cut(s) 589, 1029, 1253, 1549, 2412, 2448
BseMI GCAATG 4 cut(s) 266, 497, 758, 1715
BseMII CTCAG 3 cut(s) 543, 1122, 1503
BseNI ACTGG 7 cut(s) 408, 842, 1368, 1446, 1799, 1958, 2132
BseYI CCCAGC 1 cut(s) 317
BsgI GTGCAG 1 cut(s) 1227
BshFI GGCC 4 cut(s) 470, 780, 1007, 1445
BsiHKAI GWGCWC 2 cut(s) 721, 1678
BsiSI CCGG 3 cut(s) 13, 1055, 1229
BslFI GGGAC 1 cut(s) 1046
BslI CCNNNNNNNGG 6 cut(s) 589, 1029, 1253, 1549, 2412, 2448
BsmAI GTCTC 9 cut(s) 27, 171, 188, 245, 987, 1131, 1205, 1216, 2338
BsmBI CGTCTC 4 cut(s) 245, 987, 1205, 2338
BsmFI GGGAC 1 cut(s) 1046
BsnI GGCC 4 cut(s) 470, 780, 1007, 1445
Bso31I GGTCTC 4 cut(s) 27, 171, 1131, 1216
Bsp1286I GDGCHC 3 cut(s) 721, 1678, 2256
Bsp143I GATC 8 cut(s) 322, 740, 911, 1423, 1697, 1868, 1978, 2045
BspACI CCGC 4 cut(s) 521, 970, 1030, 1481
BspANI GGCC 4 cut(s) 470, 780, 1007, 1445
BspCNI CTCAG 3 cut(s) 544, 1123, 1504
BspLI GGNNCC 1 cut(s) 2253
BspMAI CTGCAG 4 cut(s) 357, 792, 1317, 1749
BspMI ACCTGC 1 cut(s) 243
BspOI GCTAGC 1 cut(s) 1077
BspPI GGATC 3 cut(s) 330, 1431, 2053
BspTI CTTAAG 4 cut(s) 884, 1841, 2018, 2396
BspTNI GGTCTC 4 cut(s) 27, 171, 1131, 1216
BsrDI GCAATG 4 cut(s) 266, 497, 758, 1715
BsrI ACTGG 7 cut(s) 408, 842, 1368, 1446, 1799, 1958, 2132
BssECI CCNNGG 6 cut(s) 219, 417, 418, 1179, 1377, 1378
BssMI GATC 8 cut(s) 322, 740, 911, 1423, 1697, 1868, 1978, 2045
BssSI CACGAG 1 cut(s) 259
BssT1I CCWWGG 2 cut(s) 219, 1179
Bst2BI CACGAG 1 cut(s) 259
Bst2UI CCWGG 3 cut(s) 419, 1009, 1379
Bst4CI ACNGT 5 cut(s) 21, 616, 1771, 2192, 2415
Bst6I CTCTTC 1 cut(s) 2286
BstAFI CTTAAG 4 cut(s) 884, 1841, 2018, 2396
BstC8I GCNNGC 7 cut(s) 45, 209, 1005, 1075, 2489, 2493, 2545
BstDEI CTNAG 3 cut(s) 552, 1131, 1512
BstENI CCTNNNNNAGG 1 cut(s) 1251
BstKTI GATC 8 cut(s) 325, 743, 914, 1426, 1700, 1871, 1981, 2048
BstMAI GTCTC 9 cut(s) 27, 171, 188, 245, 987, 1131, 1205, 1216, 2338
BstMBI GATC 8 cut(s) 322, 740, 911, 1423, 1697, 1868, 1978, 2045
BstMWI GCNNNNNNNGC 6 cut(s) 460, 755, 1027, 1712, 2366, 2398
BstNI CCWGG 3 cut(s) 419, 1009, 1379
BstNSI RCATGY 1 cut(s) 490
BstSCI CCNGG 6 cut(s) 12, 417, 1007, 1054, 1228, 1377
BstSFI CTRYAG 7 cut(s) 276, 353, 788, 1313, 1745, 1971, 2145
BstV2I GAAGAC 5 cut(s) 516, 867, 1476, 1824, 2157
BstX2I RGATCY 3 cut(s) 322, 1423, 1978
BstYI RGATCY 3 cut(s) 322, 1423, 1978
Bsu36I CCTNAGG 1 cut(s) 1131
BsuRI GGCC 4 cut(s) 470, 780, 1007, 1445
BtgZI GCGATG 2 cut(s) 16, 976
BtsIMutI CAGTG 4 cut(s) 415, 806, 1375, 1763
BveI ACCTGC 1 cut(s) 243
Cac8I GCNNGC 7 cut(s) 45, 209, 1005, 1075, 2489, 2493, 2545
CaiI CAGNNNCTG 5 cut(s) 551, 920, 1511, 1877, 2054
Cfr13I GGNCC 2 cut(s) 255, 1215
Csp6I GTAC 7 cut(s) 64, 556, 579, 1148, 1159, 1516, 1539
CviQI GTAC 7 cut(s) 64, 556, 579, 1148, 1159, 1516, 1539
DdeI CTNAG 3 cut(s) 552, 1131, 1512
DpnI GATC 8 cut(s) 324, 742, 913, 1425, 1699, 1870, 1980, 2047
DpnII GATC 8 cut(s) 322, 740, 911, 1423, 1697, 1868, 1978, 2045
EaeI YGGCCR 1 cut(s) 1443
Eam1104I CTCTTC 1 cut(s) 2286
EarI CTCTTC 1 cut(s) 2286
Eco130I CCWWGG 2 cut(s) 219, 1179
Eco147I AGGCCT 1 cut(s) 1007
Eco24I GRGCYC 1 cut(s) 2256
Eco31I GGTCTC 4 cut(s) 27, 171, 1131, 1216
Eco47I GGWCC 2 cut(s) 255, 1215
Eco57I CTGAAG 9 cut(s) 366, 366, 417, 1269, 1326, 1326, 1377, 1950, 2570
Eco81I CCTNAGG 1 cut(s) 1131
EcoNI CCTNNNNNAGG 1 cut(s) 1251
EcoRII CCWGG 3 cut(s) 417, 1007, 1377
EcoT14I CCWWGG 2 cut(s) 219, 1179
EcoT38I GRGCYC 1 cut(s) 2256
ErhI CCWWGG 2 cut(s) 219, 1179
Esp3I CGTCTC 4 cut(s) 245, 987, 1205, 2338
FalI AAGNNNNNCTT 9 cut(s) 50, 82, 747, 779, 1010, 1042, 1704, 1736, 2543
FaqI GGGAC 1 cut(s) 1046
FauI CCCGC 1 cut(s) 1023
FauNDI CATATG 2 cut(s) 480, 1440
FriOI GRGCYC 1 cut(s) 2256
FspBI CTAG 2 cut(s) 1074, 1427
GsaI CCCAGC 1 cut(s) 321
GsuI CTGGAG 3 cut(s) 176, 212, 1136
HaeIII GGCC 4 cut(s) 470, 780, 1007, 1445
HapII CCGG 3 cut(s) 13, 1055, 1229
HincII GTYRAC 1 cut(s) 230
HindII GTYRAC 1 cut(s) 230
HindIII AAGCTT 4 cut(s) 182, 305, 1265, 2390
HpaII CCGG 3 cut(s) 13, 1055, 1229
HphI GGTGA 8 cut(s) 694, 698, 758, 1651, 1655, 1998, 2172, 2311
Hpy166II GTNNAC 6 cut(s) 230, 258, 403, 1363, 1905, 2082
Hpy188I TCNGA 6 cut(s) 1680, 1886, 2237, 2312, 2428, 2500
Hpy188III TCNNGA 7 cut(s) 155, 191, 587, 1115, 1130, 1547, 1982
Hpy8I GTNNAC 6 cut(s) 230, 258, 403, 1363, 1905, 2082
HpyCH4III ACNGT 5 cut(s) 21, 616, 1771, 2192, 2415
HpyCH4IV ACGT 3 cut(s) 1157, 2066, 2240
HpyF10VI GCNNNNNNNGC 6 cut(s) 460, 755, 1027, 1712, 2366, 2398
HpyF3I CTNAG 3 cut(s) 552, 1131, 1512
HpySE526I ACGT 3 cut(s) 1157, 2066, 2240
Kzo9I GATC 8 cut(s) 322, 740, 911, 1423, 1697, 1868, 1978, 2045
LmnI GCTCC 3 cut(s) 249, 1411, 2251
MaeI CTAG 2 cut(s) 1074, 1427
MaeII ACGT 3 cut(s) 1157, 2066, 2240
MaeIII GTNAC 6 cut(s) 137, 337, 647, 700, 1297, 1603
MalI GATC 8 cut(s) 324, 742, 913, 1425, 1699, 1870, 1980, 2047
MboI GATC 8 cut(s) 322, 740, 911, 1423, 1697, 1868, 1978, 2045
MfeI CAATTG 2 cut(s) 244, 2510
MflI RGATCY 3 cut(s) 322, 1423, 1978
MhlI GDGCHC 3 cut(s) 721, 1678, 2256
MlsI TGGCCA 1 cut(s) 1445
MluNI TGGCCA 1 cut(s) 1445
MlyI GAGTC 2 cut(s) 1910, 2087
MmeI TCCRAC 2 cut(s) 936, 2397
Mox20I TGGCCA 1 cut(s) 1445
MroXI GAANNNNTTC 4 cut(s) 837, 1794, 1953, 2127
MscI TGGCCA 1 cut(s) 1445
Msp20I TGGCCA 1 cut(s) 1445
MspA1I CMGCKG 3 cut(s) 548, 1508, 1970
MspCI CTTAAG 4 cut(s) 884, 1841, 2018, 2396
MspI CCGG 3 cut(s) 13, 1055, 1229
MspR9I CCNGG 6 cut(s) 14, 419, 1009, 1056, 1230, 1379
MunI CAATTG 2 cut(s) 244, 2510
MvaI CCWGG 3 cut(s) 419, 1009, 1379
MwoI GCNNNNNNNGC 6 cut(s) 460, 755, 1027, 1712, 2366, 2398
NciI CCSGG 3 cut(s) 14, 1056, 1230
NdeI CATATG 2 cut(s) 480, 1440
NdeII GATC 8 cut(s) 322, 740, 911, 1423, 1697, 1868, 1978, 2045
NheI GCTAGC 1 cut(s) 1073
NlaIV GGNNCC 1 cut(s) 2253
NmuCI GTSAC 2 cut(s) 700, 1603
NspI RCATGY 1 cut(s) 490
OliI CACNNNNGTG 2 cut(s) 408, 1368
PasI CCCWGGG 2 cut(s) 418, 1378
PceI AGGCCT 1 cut(s) 1007
PdmI GAANNNNTTC 4 cut(s) 837, 1794, 1953, 2127
PfoI TCCNGGA 2 cut(s) 12, 1054
PleI GAGTC 2 cut(s) 1909, 2086
PpsI GAGTC 2 cut(s) 1909, 2086
Psp6I CCWGG 3 cut(s) 417, 1007, 1377
PspFI CCCAGC 1 cut(s) 317
PspGI CCWGG 3 cut(s) 417, 1007, 1377
PspN4I GGNNCC 1 cut(s) 2253
PspPI GGNCC 2 cut(s) 255, 1215
PstI CTGCAG 4 cut(s) 357, 792, 1317, 1749
PstNI CAGNNNCTG 5 cut(s) 551, 920, 1511, 1877, 2054
PsuI RGATCY 3 cut(s) 322, 1423, 1978
PvuII CAGCTG 3 cut(s) 548, 1508, 1970
RsaI GTAC 7 cut(s) 65, 557, 580, 1149, 1160, 1517, 1540
RsaNI GTAC 7 cut(s) 64, 556, 579, 1148, 1159, 1516, 1539
Sau3AI GATC 8 cut(s) 322, 740, 911, 1423, 1697, 1868, 1978, 2045
Sau96I GGNCC 2 cut(s) 255, 1215
SchI GAGTC 2 cut(s) 1910, 2087
ScrFI CCNGG 6 cut(s) 14, 419, 1009, 1056, 1230, 1379
SduI GDGCHC 3 cut(s) 721, 1678, 2256
SfcI CTRYAG 7 cut(s) 276, 353, 788, 1313, 1745, 1971, 2145
SinI GGWCC 2 cut(s) 255, 1215
SmlI CTYRAG 6 cut(s) 288, 884, 1841, 1982, 2018, 2396
SmoI CTYRAG 6 cut(s) 288, 884, 1841, 1982, 2018, 2396
SseBI AGGCCT 1 cut(s) 1007
SsiI CCGC 4 cut(s) 521, 970, 1030, 1481
SspI AATATT 1 cut(s) 1193
SspMI CTAG 2 cut(s) 1074, 1427
StuI AGGCCT 1 cut(s) 1007
StyD4I CCNGG 6 cut(s) 12, 417, 1007, 1054, 1228, 1377
StyI CCWWGG 2 cut(s) 219, 1179
TaaI ACNGT 5 cut(s) 21, 616, 1771, 2192, 2415
TaiI ACGT 3 cut(s) 1160, 2069, 2243
TaqI TCGA 3 cut(s) 743, 942, 1700
TscAI CASTG 4 cut(s) 415, 813, 1375, 1770
TseFI GTSAC 2 cut(s) 700, 1603
Tsp45I GTSAC 2 cut(s) 700, 1603
TspGWI ACGGA 5 cut(s) 227, 1187, 1639, 2339, 2362
TspRI CASTG 4 cut(s) 415, 813, 1375, 1770
Vha464I CTTAAG 4 cut(s) 884, 1841, 2018, 2396
VpaK11BI GGWCC 2 cut(s) 255, 1215
XagI CCTNNNNNAGG 1 cut(s) 1251
XapI RAATTY 4 cut(s) 619, 672, 1575, 1628
XceI RCATGY 1 cut(s) 490
XcmI CCANNNNNNNNNTGG 2 cut(s) 425, 1385
XmnI GAANNNNTTC 4 cut(s) 837, 1794, 1953, 2127
XspI CTAG 2 cut(s) 1074, 1427
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.