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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD02G1206400.v1.1 MD06G1111500.v1.1 MD16G1057300.v1.1 |
| rosa_multiflora | Rmu_sc0002995.1_g000006 |
| rosa_roxburghii | Rroxscaffold_6G00393520 |
| rosa_samantha | Rh3AG283800 Rh3CG318400 Rh3DG317200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 53 |
| AcoI | YGGCCR | 1 cut(s) | 54 |
| AcsI | RAATTY | 1 cut(s) | 112 |
| AfaI | GTAC | 1 cut(s) | 284 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 70 |
| AgsI | TTSAA | 4 cut(s) | 184, 215, 233, 301 |
| AloI | GAACNNNNNNTCC | 1 cut(s) | 281 |
| AluBI | AGCT | 1 cut(s) | 131 |
| AluI | AGCT | 1 cut(s) | 131 |
| Alw21I | GWGCWC | 1 cut(s) | 227 |
| AoxI | GGCC | 1 cut(s) | 54 |
| ApoI | RAATTY | 1 cut(s) | 112 |
| AspLEI | GCGC | 1 cut(s) | 63 |
| Bbv12I | GWGCWC | 1 cut(s) | 227 |
| BccI | CCATC | 1 cut(s) | 271 |
| BciVI | GTATCC | 2 cut(s) | 26, 56 |
| BfoI | RGCGCY | 1 cut(s) | 64 |
| BfuI | GTATCC | 2 cut(s) | 26, 56 |
| BisI | GCNGC | 1 cut(s) | 54 |
| BlsI | GCNGC | 1 cut(s) | 55 |
| BmrI | ACTGGG | 1 cut(s) | 211 |
| BmsI | GCATC | 1 cut(s) | 107 |
| BmuI | ACTGGG | 1 cut(s) | 211 |
| BpuEI | CTTGAG | 1 cut(s) | 34 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 266, 296 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 70 |
| Bse118I | RCCGGY | 1 cut(s) | 41 |
| Bse1I | ACTGG | 1 cut(s) | 206 |
| BseGI | GGATG | 1 cut(s) | 295 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 70 |
| BseNI | ACTGG | 1 cut(s) | 206 |
| BseRI | GAGGAG | 1 cut(s) | 31 |
| BshFI | GGCC | 1 cut(s) | 56 |
| BsiHKAI | GWGCWC | 1 cut(s) | 227 |
| BsiSI | CCGG | 2 cut(s) | 30, 42 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 70 |
| BsnI | GGCC | 1 cut(s) | 56 |
| Bsp1286I | GDGCHC | 1 cut(s) | 227 |
| BspACI | CCGC | 1 cut(s) | 53 |
| BspANI | GGCC | 1 cut(s) | 56 |
| BsrFI | RCCGGY | 1 cut(s) | 41 |
| BsrI | ACTGG | 1 cut(s) | 206 |
| BssAI | RCCGGY | 1 cut(s) | 41 |
| Bst6I | CTCTTC | 1 cut(s) | 236 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 166 |
| BstC8I | GCNNGC | 1 cut(s) | 65 |
| BstF5I | GGATG | 1 cut(s) | 295 |
| BstH2I | RGCGCY | 1 cut(s) | 64 |
| BstHHI | GCGC | 1 cut(s) | 63 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 166 |
| BsuI | GTATCC | 2 cut(s) | 26, 56 |
| BsuRI | GGCC | 1 cut(s) | 56 |
| BtsCI | GGATG | 1 cut(s) | 295 |
| Cac8I | GCNNGC | 1 cut(s) | 65 |
| CfoI | GCGC | 1 cut(s) | 63 |
| Cfr10I | RCCGGY | 1 cut(s) | 41 |
| Csp6I | GTAC | 1 cut(s) | 283 |
| CviJI | RGCY | 3 cut(s) | 29, 56, 131 |
| CviKI_1 | RGCY | 3 cut(s) | 29, 56, 131 |
| CviQI | GTAC | 1 cut(s) | 283 |
| EaeI | YGGCCR | 1 cut(s) | 54 |
| Eam1104I | CTCTTC | 1 cut(s) | 236 |
| EarI | CTCTTC | 1 cut(s) | 236 |
| FaiI | YATR | 3 cut(s) | 134, 239, 263 |
| Fnu4HI | GCNGC | 1 cut(s) | 54 |
| FokI | GGATG | 1 cut(s) | 302 |
| Fsp4HI | GCNGC | 1 cut(s) | 54 |
| GlaI | GCGC | 1 cut(s) | 62 |
| GluI | GCNGC | 1 cut(s) | 54 |
| HaeII | RGCGCY | 1 cut(s) | 64 |
| HaeIII | GGCC | 1 cut(s) | 56 |
| HapII | CCGG | 2 cut(s) | 30, 42 |
| HhaI | GCGC | 1 cut(s) | 63 |
| Hin6I | GCGC | 1 cut(s) | 61 |
| HinP1I | GCGC | 1 cut(s) | 61 |
| HinfI | GANTC | 2 cut(s) | 9, 83 |
| HpaII | CCGG | 2 cut(s) | 30, 42 |
| Hpy188I | TCNGA | 2 cut(s) | 8, 222 |
| Hpy188III | TCNNGA | 1 cut(s) | 13 |
| HpyAV | CCTTC | 3 cut(s) | 118, 178, 265 |
| HpyCH4V | TGCA | 1 cut(s) | 98 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 166 |
| HspAI | GCGC | 1 cut(s) | 61 |
| LpnPI | CCDG | 6 cut(s) | 43, 53, 55, 77, 187, 271 |
| LweI | GCATC | 1 cut(s) | 107 |
| MaeIII | GTNAC | 1 cut(s) | 148 |
| MboII | GAAGA | 1 cut(s) | 253 |
| MfeI | CAATTG | 1 cut(s) | 228 |
| MhlI | GDGCHC | 1 cut(s) | 227 |
| MluCI | AATT | 3 cut(s) | 112, 215, 228 |
| MnlI | CCTC | 3 cut(s) | 9, 67, 150 |
| MseI | TTAA | 2 cut(s) | 116, 138 |
| MspI | CCGG | 2 cut(s) | 30, 42 |
| MunI | CAATTG | 1 cut(s) | 228 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 166 |
| NmuCI | GTSAC | 1 cut(s) | 148 |
| PfeI | GAWTC | 2 cut(s) | 9, 83 |
| PkrI | GCNGC | 1 cut(s) | 55 |
| RsaI | GTAC | 1 cut(s) | 284 |
| RsaNI | GTAC | 1 cut(s) | 283 |
| SaqAI | TTAA | 2 cut(s) | 116, 138 |
| SatI | GCNGC | 1 cut(s) | 54 |
| SduI | GDGCHC | 1 cut(s) | 227 |
| SetI | ASST | 3 cut(s) | 39, 96, 133 |
| SfaNI | GCATC | 1 cut(s) | 107 |
| SmlI | CTYRAG | 1 cut(s) | 13 |
| SmoI | CTYRAG | 1 cut(s) | 13 |
| Sse9I | AATT | 3 cut(s) | 112, 215, 228 |
| SsiI | CCGC | 1 cut(s) | 53 |
| TaqI | TCGA | 2 cut(s) | 25, 171 |
| TasI | AATT | 3 cut(s) | 112, 215, 228 |
| TatI | WGTACW | 1 cut(s) | 282 |
| TauI | GCSGC | 1 cut(s) | 56 |
| TfiI | GAWTC | 2 cut(s) | 9, 83 |
| Tru1I | TTAA | 2 cut(s) | 116, 138 |
| Tru9I | TTAA | 2 cut(s) | 116, 138 |
| TseFI | GTSAC | 1 cut(s) | 148 |
| Tsp45I | GTSAC | 1 cut(s) | 148 |
| TspDTI | ATGAA | 1 cut(s) | 254 |
| TspGWI | ACGGA | 2 cut(s) | 38, 167 |
| XapI | RAATTY | 1 cut(s) | 112 |