Rroxscaffold_6G00401090
ERF Family

Pectate lyase superfamily protein

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
Physical Location & Seq
Reverse (-)
23321433 .. 23327305
5873 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00401090.1

Sequence Viewer

Length: 1413 bp
ATGGCCGCACTCTTCTTCTTCCCCTTTCTACTTGCTCTCCTCCACTCCACCTCCGCCACGTCATCATCCCCACCCACCATCGAGCTCTTCCGCAACCTCGCCGCCGCTCTCTCCGTCACCGACTTCGGCGCCACCGGAGACGGCGTCACCTACGACACCTCCGCCATCCAATCAGCCATCGACAGCTGCTGCACCACGCCCTGCCACGTCACCTTCCCGAGTGGAGGCACCTACCTGACCGCGACGATCCGCCTCAAATCCGGCGTCGTTTTGCACATCGAAGAGGGCGCGACTCTCCTCGGCGGCACGCGGCTGCGGGACTACCCGATCGAGCAGGAGCGGTGGTACGTGGTGTTGGCCGAGAACGCCACCGATGTGGGGATCACCGGCGGCGGAGTCGTCGACGGCCAGGGGCTTGAGTTCGTGAAGAGATTCGATGAGAAGAAGAATGTGATGGTCAGCTGGAACTCGACTGGGGCTTGCTTGGGAGACGAGTGCCGGCCAAGGCTCGTCGGCTTCCTTGACTGTAGAAATGTCAAGCTTTCCAATATTGAGTTGCGTCAGCCGGCTTACTGGTGCTTGCACATTGTACGTTGTGAGCACATTACTATTCAAGATGTTTCAATTTATGGAGATTTCAATACACCCAATAATGATGGGATAGATATTGAGGATTCAAATAATACTGTCATTACTAGATGCCATATCGATACTGGAGATGATGCTATCTGTCCAAAGACGTATTTTGGGCCCCTTTATAACTTAACTGTAACAAATTGCTGGATTCGGACCAAGTCTTCAGCAATCAAACTTGGCAGTGCTAGTTGGTTTGATTTTAAAGGTCTGGTGTTTGACAATATCACTATTGCAGATTCTCATAGAGGGCTGGGATTCCAGATACGTGATGGAGGAAATGTGAGTGATGTTATCTTTTCAAACATTAATATCAGCACAAGATACTATCATCAATCCTGGTGGGGAAGAGCAGAACCTATTTATGTGACTACTTGTCCACGCAACTCATATTCAAAGGAGGGTTCAATCTCTAACCTACTCTTTGTGAACATCAGTGCAAATTCAGAGAATGGTATATTTTTATCAGGCTCTAAAAAGGGGCTTCTTAGAGATTTGAGATTCATCAACTTGAATCTGACCTACAGCAGACGGACCAACAATGTGGGTGGGTTGGTAGACTACAGACCAGGATGCCAAGGGCTGGTAAAGCACAGCACAGCTGGTTTCATCATGGAGCACATTAATGGCTTAGTGTTTGACAATATTTACATGAGATGGTCCGATGAGCAATGGGGGCTATTATTCGGAAGCCTGAATCTTTCTTTTCACCCTACTACTAGGAGGAACTTGAATTTCCGGACAAAAGCTAGCCGAGACGAAAGCTCCTCGGTTTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

470

Amino Acids

52.14

Weight (kDa)

6.27

Isoelectric Point (pI)

48.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pect-lyase_RHGA_epim PF12708 38 - 91 3.8e-10 Rhamnogalacturonase A/epimerase, pectate lyase-like
Glyco_hydro_28 PF00295 69 - 391 3.2e-22 Glycosyl hydrolases family 28
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013425)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 759
AccB1I GGYRCC 2 cut(s) 128, 227
AccB7I CCANNNNNTGG 1 cut(s) 1216
AccBSI CCGCTC 2 cut(s) 107, 340
AccI GTMKAC 2 cut(s) 402, 1191
AccII CGCG 3 cut(s) 242, 290, 310
AccIII TCCGGA 1 cut(s) 1371
AclWI GGATC 2 cut(s) 241, 389
AcoI YGGCCR 4 cut(s) 3, 357, 406, 500
AcsI RAATTY 2 cut(s) 1075, 1366
AcuI CTGAAG 1 cut(s) 783
AcyI GRCGYC 3 cut(s) 129, 144, 264
AfaI GTAC 2 cut(s) 347, 591
AfiI CCNNNNNNNGG 3 cut(s) 224, 378, 1216
AgsI TTSAA 9 cut(s) 614, 624, 640, 678, 936, 1029, 1041, 1147, 1366
AhdI GACNNNNNGTC 1 cut(s) 1008
AjiI CACGTC 2 cut(s) 60, 208
AjnI CCWGG 3 cut(s) 408, 971, 1201
AleI CACNNNNGTG 1 cut(s) 374
AluBI AGCT 7 cut(s) 85, 186, 462, 541, 1235, 1382, 1398
AluI AGCT 7 cut(s) 85, 186, 462, 541, 1235, 1382, 1398
Alw21I GWGCWC 3 cut(s) 87, 603, 1254
Alw26I GTCTC 3 cut(s) 132, 483, 1383
AlwI GGATC 2 cut(s) 241, 389
AlwNI CAGNNNCTG 1 cut(s) 189
Ama87I CYCGRG 1 cut(s) 217
Aor13HI TCCGGA 1 cut(s) 1371
AoxI GGCC 5 cut(s) 3, 357, 406, 500, 749
ApaI GGGCCC 1 cut(s) 753
ApeKI GCWGC 3 cut(s) 186, 189, 313
ApoI RAATTY 2 cut(s) 1075, 1366
ArsI GACNNNNNNTTYG 2 cut(s) 249, 281
AseI ATTAAT 2 cut(s) 942, 1257
Asp700I GAANNNNTTC 1 cut(s) 431
AspLEI GCGC 2 cut(s) 131, 290
AspS9I GGNCC 5 cut(s) 749, 750, 789, 1167, 1293
AsuHPI GGTGA 5 cut(s) 109, 139, 202, 376, 1334
AsuNHI GCTAGC 1 cut(s) 1382
AvaI CYCGRG 1 cut(s) 217
AvaII GGWCC 3 cut(s) 789, 1167, 1293
BaeGI GKGCMC 1 cut(s) 753
BanI GGYRCC 2 cut(s) 128, 227
BanII GRGCYC 2 cut(s) 87, 753
BbsI GAAGAC 1 cut(s) 789
Bbv12I GWGCWC 3 cut(s) 87, 603, 1254
BbvI GCAGC 3 cut(s) 173, 176, 300
BccI CCATC 7 cut(s) 86, 173, 185, 448, 650, 899, 1284
BceAI ACGGC 2 cut(s) 157, 421
BciT130I CCWGG 3 cut(s) 410, 973, 1203
BcoDI GTCTC 3 cut(s) 132, 483, 1383
BfaI CTAG 4 cut(s) 696, 822, 1353, 1383
BfmI CTRYAG 3 cut(s) 526, 1156, 1195
BfoI RGCGCY 1 cut(s) 132
BisI GCNGC 9 cut(s) 6, 102, 105, 187, 190, 304, 311, 314, 391
BlsI GCNGC 9 cut(s) 7, 103, 106, 188, 191, 305, 312, 315, 392
Bme1390I CCNGG 3 cut(s) 410, 973, 1203
Bme18I GGWCC 3 cut(s) 789, 1167, 1293
BmeRI GACNNNNNGTC 1 cut(s) 1008
BmeT110I CYCGRG 1 cut(s) 217
BmgBI CACGTC 2 cut(s) 60, 208
BmgT120I GGNCC 5 cut(s) 749, 750, 789, 1167, 1293
BmiI GGNNCC 4 cut(s) 130, 229, 751, 752
BmrFI CCNGG 3 cut(s) 410, 973, 1203
BmrI ACTGGG 1 cut(s) 483
BmsI GCATC 3 cut(s) 689, 712, 1196
BmtI GCTAGC 1 cut(s) 1386
BmuI ACTGGG 1 cut(s) 483
BpiI GAAGAC 1 cut(s) 789
BpmI CTGGAG 1 cut(s) 735
BpuEI CTTGAG 1 cut(s) 437
Bsa29I ATCGAT 1 cut(s) 708
BsaAI YACGTR 2 cut(s) 349, 902
BsaHI GRCGYC 3 cut(s) 129, 144, 264
BsaJI CCNNGG 5 cut(s) 298, 409, 503, 1210, 1401
BsaWI WCCGGW 2 cut(s) 134, 1371
Bsc4I CCNNNNNNNGG 3 cut(s) 224, 378, 1216
Bse118I RCCGGY 3 cut(s) 386, 498, 565
Bse1I ACTGG 3 cut(s) 478, 578, 718
Bse3DI GCAATG 1 cut(s) 1310
BseAI TCCGGA 1 cut(s) 1371
BseBI CCWGG 3 cut(s) 410, 973, 1203
BseCI ATCGAT 1 cut(s) 708
BseDI CCNNGG 5 cut(s) 298, 409, 503, 1210, 1401
BseGI GGATG 3 cut(s) 65, 165, 1211
BseLI CCNNNNNNNGG 3 cut(s) 224, 378, 1216
BseMI GCAATG 1 cut(s) 1310
BseNI ACTGG 3 cut(s) 478, 578, 718
BseRI GAGGAG 3 cut(s) 29, 287, 1390
BseSI GKGCMC 1 cut(s) 753
BseXI GCAGC 3 cut(s) 173, 176, 300
BseYI CCCAGC 1 cut(s) 886
BsgI GTGCAG 1 cut(s) 175
Bsh1236I CGCG 3 cut(s) 242, 290, 310
Bsh1285I CGRYCG 1 cut(s) 330
BshFI GGCC 5 cut(s) 5, 359, 408, 502, 751
BshNI GGYRCC 2 cut(s) 128, 227
BshVI ATCGAT 1 cut(s) 708
BsiEI CGRYCG 1 cut(s) 330
BsiHKAI GWGCWC 3 cut(s) 87, 603, 1254
BsiHKCI CYCGRG 1 cut(s) 217
BsiSI CCGG 6 cut(s) 135, 261, 387, 499, 566, 1372
BslFI GGGAC 1 cut(s) 332
BslI CCNNNNNNNGG 3 cut(s) 224, 378, 1216
BsmAI GTCTC 3 cut(s) 132, 483, 1383
BsmBI CGTCTC 3 cut(s) 132, 483, 1383
BsmFI GGGAC 1 cut(s) 332
BsnI GGCC 5 cut(s) 5, 359, 408, 502, 751
BsoBI CYCGRG 1 cut(s) 217
Bsp120I GGGCCC 1 cut(s) 749
Bsp1286I GDGCHC 4 cut(s) 87, 603, 753, 1254
Bsp13I TCCGGA 1 cut(s) 1371
Bsp143I GATC 3 cut(s) 246, 327, 381
BspANI GGCC 5 cut(s) 5, 359, 408, 502, 751
BspDI ATCGAT 1 cut(s) 708
BspEI TCCGGA 1 cut(s) 1371
BspFNI CGCG 3 cut(s) 242, 290, 310
BspLI GGNNCC 4 cut(s) 130, 229, 751, 752
BspOI GCTAGC 1 cut(s) 1386
BspPI GGATC 2 cut(s) 241, 389
BspQI GCTCTTC 2 cut(s) 92, 976
BspT107I GGYRCC 2 cut(s) 128, 227
BsrBI CCGCTC 2 cut(s) 107, 340
BsrDI GCAATG 1 cut(s) 1310
BsrFI RCCGGY 3 cut(s) 386, 498, 565
BsrI ACTGG 3 cut(s) 478, 578, 718
BssAI RCCGGY 3 cut(s) 386, 498, 565
BssECI CCNNGG 5 cut(s) 298, 409, 503, 1210, 1401
BssMI GATC 3 cut(s) 246, 327, 381
BssNI GRCGYC 3 cut(s) 129, 144, 264
BssT1I CCWWGG 2 cut(s) 503, 1210
Bst2UI CCWGG 3 cut(s) 410, 973, 1203
Bst4CI ACNGT 3 cut(s) 527, 688, 769
Bst6I CTCTTC 5 cut(s) 17, 92, 276, 422, 976
BstACI GRCGYC 3 cut(s) 129, 144, 264
BstBAI YACGTR 2 cut(s) 349, 902
BstC8I GCNNGC 6 cut(s) 308, 481, 500, 567, 581, 1384
BstDEI CTNAG 2 cut(s) 1121, 1264
BstF5I GGATG 3 cut(s) 65, 165, 1211
BstFNI CGCG 3 cut(s) 242, 290, 310
BstH2I RGCGCY 1 cut(s) 132
BstHHI GCGC 2 cut(s) 131, 290
BstKTI GATC 3 cut(s) 249, 330, 384
BstMAI GTCTC 3 cut(s) 132, 483, 1383
BstMBI GATC 3 cut(s) 246, 327, 381
BstMCI CGRYCG 1 cut(s) 330
BstMWI GCNNNNNNNGC 3 cut(s) 365, 1222, 1309
BstNI CCWGG 3 cut(s) 410, 973, 1203
BstSCI CCNGG 3 cut(s) 408, 971, 1201
BstSFI CTRYAG 3 cut(s) 526, 1156, 1195
BstSLI GKGCMC 1 cut(s) 753
BstUI CGCG 3 cut(s) 242, 290, 310
BstV1I GCAGC 3 cut(s) 173, 176, 300
BstV2I GAAGAC 1 cut(s) 789
BstXI CCANNNNNNTGG 2 cut(s) 376, 1177
Bsu15I ATCGAT 1 cut(s) 708
BsuRI GGCC 5 cut(s) 5, 359, 408, 502, 751
BsuTUI ATCGAT 1 cut(s) 708
BtrI CACGTC 2 cut(s) 60, 208
BtsCI GGATG 3 cut(s) 65, 165, 1211
BtsI GCAGTG 1 cut(s) 823
BtsIMutI CAGTG 2 cut(s) 823, 1075
Cac8I GCNNGC 6 cut(s) 308, 481, 500, 567, 581, 1384
CaiI CAGNNNCTG 1 cut(s) 189
CfoI GCGC 2 cut(s) 131, 290
Cfr10I RCCGGY 3 cut(s) 386, 498, 565
Cfr13I GGNCC 5 cut(s) 749, 750, 789, 1167, 1293
ClaI ATCGAT 1 cut(s) 708
CseI GACGC 3 cut(s) 133, 253, 548
Csp6I GTAC 2 cut(s) 346, 590
CspCI CAANNNNNGTGG 4 cut(s) 956, 991, 1162, 1197
CviAII CATG 2 cut(s) 1246, 1285
CviQI GTAC 2 cut(s) 346, 590
DdeI CTNAG 2 cut(s) 1121, 1264
DinI GGCGCC 1 cut(s) 130
DpnI GATC 3 cut(s) 248, 329, 383
DpnII GATC 3 cut(s) 246, 327, 381
DraI TTTAAA 1 cut(s) 838
DriI GACNNNNNGTC 1 cut(s) 1008
EaeI YGGCCR 4 cut(s) 3, 357, 406, 500
Eam1104I CTCTTC 5 cut(s) 17, 92, 276, 422, 976
Eam1105I GACNNNNNGTC 1 cut(s) 1008
EarI CTCTTC 5 cut(s) 17, 92, 276, 422, 976
EciI GGCGGA 4 cut(s) 43, 151, 239, 408
Ecl136II GAGCTC 1 cut(s) 85
Eco130I CCWWGG 2 cut(s) 503, 1210
Eco24I GRGCYC 2 cut(s) 87, 753
Eco47I GGWCC 3 cut(s) 789, 1167, 1293
Eco53kI GAGCTC 1 cut(s) 85
Eco57I CTGAAG 1 cut(s) 783
Eco88I CYCGRG 1 cut(s) 217
EcoICRI GAGCTC 1 cut(s) 85
EcoO109I RGGNCCY 1 cut(s) 750
EcoRII CCWGG 3 cut(s) 408, 971, 1201
EcoT14I CCWWGG 2 cut(s) 503, 1210
EcoT38I GRGCYC 2 cut(s) 87, 753
EgeI GGCGCC 1 cut(s) 130
EheI GGCGCC 1 cut(s) 130
ErhI CCWWGG 2 cut(s) 503, 1210
Esp3I CGTCTC 3 cut(s) 132, 483, 1383
FaeI CATG 2 cut(s) 1249, 1288
FaiI YATR 9 cut(s) 630, 705, 759, 879, 999, 1024, 1091, 1247, 1286
FaqI GGGAC 1 cut(s) 332
FatI CATG 2 cut(s) 1245, 1284
FauI CCCGC 1 cut(s) 309
FblI GTMKAC 2 cut(s) 402, 1191
Fnu4HI GCNGC 9 cut(s) 6, 102, 105, 187, 190, 304, 311, 314, 391
FokI GGATG 3 cut(s) 52, 152, 1218
FriOI GRGCYC 2 cut(s) 87, 753
Fsp4HI GCNGC 9 cut(s) 6, 102, 105, 187, 190, 304, 311, 314, 391
FspBI CTAG 4 cut(s) 696, 822, 1353, 1383
GlaI GCGC 2 cut(s) 130, 289
GluI GCNGC 9 cut(s) 6, 102, 105, 187, 190, 304, 311, 314, 391
GsaI CCCAGC 1 cut(s) 890
GsuI CTGGAG 1 cut(s) 735
HaeII RGCGCY 1 cut(s) 132
HaeIII GGCC 5 cut(s) 5, 359, 408, 502, 751
HapII CCGG 6 cut(s) 135, 261, 387, 499, 566, 1372
HgaI GACGC 3 cut(s) 133, 253, 548
HhaI GCGC 2 cut(s) 131, 290
Hin1I GRCGYC 3 cut(s) 129, 144, 264
Hin1II CATG 2 cut(s) 1249, 1288
Hin6I GCGC 2 cut(s) 129, 288
HinP1I GCGC 2 cut(s) 129, 288
HincII GTYRAC 1 cut(s) 403
HindII GTYRAC 1 cut(s) 403
HindIII AAGCTT 1 cut(s) 539
HpaII CCGG 6 cut(s) 135, 261, 387, 499, 566, 1372
HphI GGTGA 5 cut(s) 109, 139, 202, 376, 1334
Hpy166II GTNNAC 4 cut(s) 403, 1013, 1063, 1192
Hpy188I TCNGA 5 cut(s) 789, 1081, 1152, 1297, 1322
Hpy188III TCNNGA 5 cut(s) 217, 424, 614, 895, 1372
Hpy8I GTNNAC 4 cut(s) 403, 1013, 1063, 1192
Hpy99I CGWCG 5 cut(s) 247, 269, 404, 407, 515
HpyAV CCTTC 1 cut(s) 223
HpyCH4III ACNGT 3 cut(s) 527, 688, 769
HpyCH4IV ACGT 6 cut(s) 59, 207, 348, 592, 740, 901
HpyCH4V TGCA 5 cut(s) 192, 274, 583, 869, 1073
HpyF10VI GCNNNNNNNGC 3 cut(s) 365, 1222, 1309
HpyF3I CTNAG 2 cut(s) 1121, 1264
HpySE526I ACGT 6 cut(s) 59, 207, 348, 592, 740, 901
Hsp92I GRCGYC 3 cut(s) 129, 144, 264
Hsp92II CATG 2 cut(s) 1249, 1288
HspAI GCGC 2 cut(s) 129, 288
KasI GGCGCC 1 cut(s) 128
Kpn2I TCCGGA 1 cut(s) 1371
KroI GCCGGC 2 cut(s) 498, 565
KroNI GCCGGC 2 cut(s) 500, 567
Kzo9I GATC 3 cut(s) 246, 327, 381
LguI GCTCTTC 2 cut(s) 92, 976
LmnI GCTCC 3 cut(s) 337, 1249, 1403
Lsp1109I GCAGC 3 cut(s) 173, 176, 300
LweI GCATC 3 cut(s) 689, 712, 1196
MaeI CTAG 4 cut(s) 696, 822, 1353, 1383
MaeII ACGT 6 cut(s) 59, 207, 348, 592, 740, 901
MaeIII GTNAC 5 cut(s) 115, 145, 208, 769, 1000
MalI GATC 3 cut(s) 248, 329, 383
MbiI CCGCTC 2 cut(s) 107, 340
MboI GATC 3 cut(s) 246, 327, 381
MhlI GDGCHC 4 cut(s) 87, 603, 753, 1254
MluCI AATT 4 cut(s) 624, 775, 1075, 1366
Mly113I GGCGCC 1 cut(s) 129
MlyI GAGTC 2 cut(s) 286, 405
MroI TCCGGA 1 cut(s) 1371
MroNI GCCGGC 2 cut(s) 498, 565
MroXI GAANNNNTTC 1 cut(s) 431
MseI TTAA 4 cut(s) 764, 837, 942, 1257
MslI CAYNNNNRTG 2 cut(s) 374, 1257
MspA1I CMGCKG 3 cut(s) 186, 462, 1235
MspI CCGG 6 cut(s) 135, 261, 387, 499, 566, 1372
MspR9I CCNGG 3 cut(s) 410, 973, 1203
MvaI CCWGG 3 cut(s) 410, 973, 1203
MvnI CGCG 3 cut(s) 242, 290, 310
MwoI GCNNNNNNNGC 3 cut(s) 365, 1222, 1309
NaeI GCCGGC 2 cut(s) 500, 567
NarI GGCGCC 1 cut(s) 129
NdeII GATC 3 cut(s) 246, 327, 381
NgoMIV GCCGGC 2 cut(s) 498, 565
NheI GCTAGC 1 cut(s) 1382
NlaIII CATG 2 cut(s) 1249, 1288
NlaIV GGNNCC 4 cut(s) 130, 229, 751, 752
NmeAIII GCCGAG 3 cut(s) 279, 385, 1412
NmuCI GTSAC 4 cut(s) 115, 145, 208, 1000
OliI CACNNNNGTG 1 cut(s) 374
PciSI GCTCTTC 2 cut(s) 92, 976
PdiI GCCGGC 2 cut(s) 500, 567
PdmI GAANNNNTTC 1 cut(s) 431
PfeI GAWTC 8 cut(s) 432, 674, 784, 872, 891, 1134, 1147, 1330
PflFI GACNNNGTC 2 cut(s) 143, 793
PflMI CCANNNNNTGG 1 cut(s) 1216
PkrI GCNGC 9 cut(s) 7, 103, 106, 188, 191, 305, 312, 315, 392
Ple19I CGATCG 1 cut(s) 330
PleI GAGTC 2 cut(s) 286, 404
PluTI GGCGCC 1 cut(s) 132
PpsI GAGTC 2 cut(s) 286, 404
Ppu21I YACGTR 2 cut(s) 349, 902
PshBI ATTAAT 2 cut(s) 942, 1257
PsiI TTATAA 1 cut(s) 759
Psp124BI GAGCTC 1 cut(s) 87
Psp6I CCWGG 3 cut(s) 408, 971, 1201
PspFI CCCAGC 1 cut(s) 886
PspGI CCWGG 3 cut(s) 408, 971, 1201
PspN4I GGNNCC 4 cut(s) 130, 229, 751, 752
PspOMI GGGCCC 1 cut(s) 749
PspPI GGNCC 5 cut(s) 749, 750, 789, 1167, 1293
PstNI CAGNNNCTG 1 cut(s) 189
PsyI GACNNNGTC 2 cut(s) 143, 793
PvuI CGATCG 1 cut(s) 330
PvuII CAGCTG 3 cut(s) 186, 462, 1235
RsaI GTAC 2 cut(s) 347, 591
RsaNI GTAC 2 cut(s) 346, 590
RseI CAYNNNNRTG 2 cut(s) 374, 1257
SacI GAGCTC 1 cut(s) 87
SalI GTCGAC 1 cut(s) 401
SapI GCTCTTC 2 cut(s) 92, 976
SaqAI TTAA 4 cut(s) 764, 837, 942, 1257
SatI GCNGC 9 cut(s) 6, 102, 105, 187, 190, 304, 311, 314, 391
Sau3AI GATC 3 cut(s) 246, 327, 381
Sau96I GGNCC 5 cut(s) 749, 750, 789, 1167, 1293
SchI GAGTC 2 cut(s) 286, 405
ScrFI CCNGG 3 cut(s) 410, 973, 1203
SduI GDGCHC 4 cut(s) 87, 603, 753, 1254
SfaNI GCATC 3 cut(s) 689, 712, 1196
SfcI CTRYAG 3 cut(s) 526, 1156, 1195
SfoI GGCGCC 1 cut(s) 130
SgrAI CRCCGGYG 1 cut(s) 386
SgrDI CGTCGACG 1 cut(s) 401
SinI GGWCC 3 cut(s) 789, 1167, 1293
SmiMI CAYNNNNRTG 2 cut(s) 374, 1257
SmlI CTYRAG 1 cut(s) 416
SmoI CTYRAG 1 cut(s) 416
Sse9I AATT 4 cut(s) 624, 775, 1075, 1366
SspDI GGCGCC 1 cut(s) 128
SspI AATATT 2 cut(s) 550, 1279
SspMI CTAG 4 cut(s) 696, 822, 1353, 1383
SstI GAGCTC 1 cut(s) 87
StyD4I CCNGG 3 cut(s) 408, 971, 1201
StyI CCWWGG 2 cut(s) 503, 1210
TaaI ACNGT 3 cut(s) 527, 688, 769
TaiI ACGT 6 cut(s) 62, 210, 351, 595, 743, 904
TaqI TCGA 8 cut(s) 81, 180, 279, 330, 402, 435, 470, 708
TasI AATT 4 cut(s) 624, 775, 1075, 1366
TauI GCSGC 6 cut(s) 8, 104, 107, 306, 313, 393
TfiI GAWTC 8 cut(s) 432, 674, 784, 872, 891, 1134, 1147, 1330
Tru1I TTAA 4 cut(s) 764, 837, 942, 1257
Tru9I TTAA 4 cut(s) 764, 837, 942, 1257
TscAI CASTG 2 cut(s) 823, 1075
TseFI GTSAC 4 cut(s) 115, 145, 208, 1000
TseI GCWGC 3 cut(s) 186, 189, 313
Tsp45I GTSAC 4 cut(s) 115, 145, 208, 1000
TspDTI ATGAA 2 cut(s) 1126, 1231
TspGWI ACGGA 2 cut(s) 103, 1180
TspRI CASTG 2 cut(s) 823, 1075
Tth111I GACNNNGTC 2 cut(s) 143, 793
Van91I CCANNNNNTGG 1 cut(s) 1216
VpaK11BI GGWCC 3 cut(s) 789, 1167, 1293
VspI ATTAAT 2 cut(s) 942, 1257
XapI RAATTY 2 cut(s) 1075, 1366
XcmI CCANNNNNNNNNTGG 2 cut(s) 710, 902
XmiI GTMKAC 2 cut(s) 402, 1191
XmnI GAANNNNTTC 1 cut(s) 431
XspI CTAG 4 cut(s) 696, 822, 1353, 1383
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.