Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0017068

Physical Location & Seq

Genomic Coordinates Forward (+)

33775495 .. 33777303

Gene Structure 1809 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00411260.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1809 bp

ATGATATCAAACCAACAAGTCGCTCAACAAATCGCTAAAACCCTAGCGGAATCAGGCCTTCAACACCTGAAAACCTCCTCATCTCTGCTCTCCAATCTCAACCCCCACATAACCCACCTCGTCCTCTCAGACCCAATCCTCCCACCTCAATCTTGCTTGACCTTATTCAACTTCCTCAGAAGAAACCCGTCTCTCAAATCCCACAGACCCAATCTCCAAGCCCATGTAACCCTCTTTTGCAGGCTCCACCAAGCTAAAAGATTCGCCCAAATGAAGAATGTGGTGAATGCTATAGTGAACAACGATCGTCTCCGCTGCCCGGTTTCCGGAATCGTTTCTTTGATCGAGAATGGTTCTTATGCGCCTGACTCGGTGGAGAAACTTTGTGATATGCTATTCAGGGTTTATGCGGACAACCAAATGTTTGAAGAAGCTATTGGGGTTTTTGATTATGTGTACAAGAATGGGCTTGAGATAGAAGAAAGGTCCTGCTTTGTGCTTTTGCTCGCATTGAAGAAGTGTTATCAAGTGGATAAGTGTTTAAGTTTCTTTGATCTAATGCTCGAAAAGGGTGTTCGGATCACGGTTTATTCCATGACATTAGTGATCAATGAGCTTTGTAAGAGAGGAGAGGTGGAAAAGGCTAAGACATTGATGGGTGAAATGGGTGGGAGAGGGATTGAGGCTAATGTTTATACGTATAACACGATTACGAAAGCCTACATTGAAATGAAGGATTTCGGTGGGGTTAATGAGGTCTTGAGCTTGATGAAGATGAATAATGTGGAGTATAATGTGGCAACATACAACCTTTTGATTGATTGGTATGGGAGTTGTGAGAAGATTGGAGATGCAGAGAAGCTGTTTGATGAAATGCGTGAGAGAGGGATAGAGCCGGATGTGTATGTTTACACTTCGATGATTAACTGGAATTGTAGAGCGGGGAAAATGAAAAGGGCATTGTTTCTGTTCGATGAAATGACTGAAAGAAGGCTTGTTCCGAATGATCACACTTACGGCGCGTTGATTAATGGTGCTTGTAAGGCAGGGCAGATGGAGATGGCAGACATTTTGGTGAAAGAGATGCAAGGTAAAGGAATTGCCATAAACCGAGTTGTGTATAATACACTGATTGATGGGTACTGCAGAAAAGGGATGGTAGATGAAGCTCAGAGGTTCCAGGATGTAATGGAAAAGAAAGGGTTGAAGGCTGATGTGTATACTTACTGCACTATAGCTAGGGGATTGTTTAAATTGAATAGGAATGAGGAGGCAAAGAGGTCCTTGTTAACTATGGCAGAAAGAGGTGTGGCTCCAAACTCAGTGTGCTTCACTACTCTGATAGACATATATTGCAAGGAAGGAGACTTTGTTGAAGCAAGGCGGGTATTTCAGGAGATGGAAAGGAAAGGAGAGAGACCTAATAACGTAACATACAATGCTCTAATTGATGGGCATATCAAGAAAGGTAAACTGAAGGAAGCGCATAAGATAAAAGAGGAGATGGAAGACAAGGGTTTGATGGCAGATTCGTTTACATATTCATCGCTCATACATGGTGAATGTATTGCTGGCAACGTGGATGCAGCACTTACATTGTTTCATGAAATGTCCCAGAGGGGTCTAACTCAAAACGTTGTCACATACACAGTAATTATTTCGGGTTTGTCTAAGGTGGGGAGAAAAGAAGAAGCTTTCAAATTGTACGATGACATGAAAAAAGCAGGCATCATACCTGATGACAGGGTATATAATTCACTTGTACAAGGCCTTTATACAGACAAGTCTAGCTCTATGACAGATGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

602

Amino Acids

68.28

Weight (kDa)

7.12

Isoelectric Point (pI)

31.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	196 - 241	2.4e-10	PPR repeat family
PPR_3	PF13812	218 - 277	1.1e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	261 - 293	2e-06	PPR repeat
PPR_2	PF13041	265 - 313	1e-15	PPR repeat family
PPR	PF01535	268 - 297	2.9e-07	PPR repeat
PPR_long	PF17177	279 - 404	1.2e-08	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	287 - 344	3.3e-11	Pentatricopeptide repeat domain
PPR_1	PF12854	295 - 328	3.3e-09	PPR repeat
PPR_2	PF13041	299 - 348	4e-15	PPR repeat family
PPR	PF01535	303 - 331	1.3e-06	PPR repeat
PPR	PF01535	338 - 367	2.3e-06	PPR repeat
PPR_2	PF13041	338 - 374	6.9e-06	PPR repeat family
PPR_3	PF13812	358 - 412	2.5e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	365 - 398	1.2e-11	PPR repeat
PPR_2	PF13041	370 - 418	1.1e-14	PPR repeat family
PPR	PF01535	372 - 402	6.3e-08	PPR repeat
PPR_long	PF17177	424 - 521	1.2e-06	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	432 - 484	1.1e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	435 - 468	2.7e-10	PPR repeat
PPR_2	PF13041	439 - 487	9e-17	PPR repeat family
PPR	PF01535	442 - 471	1.4e-08	PPR repeat
PPR_1	PF12854	471 - 503	5e-08	PPR repeat
PPR_2	PF13041	474 - 522	5.8e-16	PPR repeat family
TPR_24	PF23276	476 - 571	7.6e-06	Fungal tetratrico peptide repeats
PPR	PF01535	477 - 507	2.6e-07	PPR repeat
PPR_3	PF13812	497 - 554	1.1e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	505 - 538	3.3e-09	PPR repeat
PPR	PF01535	512 - 542	1.8e-06	PPR repeat
PPR_2	PF13041	516 - 558	1.4e-10	PPR repeat family
PPR_3	PF13812	533 - 588	3.7e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	540 - 573	2.4e-07	PPR repeat
PPR_2	PF13041	545 - 591	2.7e-15	PPR repeat family
PPR	PF01535	547 - 577	7.5e-08	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0017068)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32630
fragaria_vesca	FvH4_6g16190
malus_domestica	MD04G1094800.v1.1
prunus_persica	Prupe.6G234000_v2.0.a1
pyrus_communis	pycom04g08980
rosa_chinensis	RchiOBHm_Chr3g0470041
rosa_laevigata	RLG00000024301
rosa_multiflora	Rmu_co8368425.1_g000001 Rmu_sc0017440.1_g000003
rosa_roxburghii	Rroxscaffold_6G00411260
rosa_rugosa	Rorug03G0106300.1
rosa_samantha	Rh3CG170300
rosa_wichuraiana	Rw3G014650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	941
AccI	GTMKAC	1 cut(s)	1220
AccII	CGCG	1 cut(s)	1022
AccIII	TCCGGA	1 cut(s)	326
AciI	CCGC	5 cut(s)	47, 313, 410, 941, 1384
AclI	AACGTT	1 cut(s)	1635
AclWI	GGATC	1 cut(s)	587
AcuI	CTGAAG	1 cut(s)	1496
AfaI	GTAC	4 cut(s)	458, 1142, 1706, 1764
AfiI	CCNNNNNNNGG	2 cut(s)	319, 326
AgsI	TTSAA	9 cut(s)	62, 169, 428, 514, 728, 1207, 1258, 1376, 1699
AjnI	CCWGG	1 cut(s)	1179
AjuI	GAANNNNNNNTTGG	2 cut(s)	420, 452
AluBI	AGCT	9 cut(s)	254, 434, 616, 765, 862, 1169, 1238, 1694, 1791
AluI	AGCT	9 cut(s)	254, 434, 616, 765, 862, 1169, 1238, 1694, 1791
Alw26I	GTCTC	4 cut(s)	195, 314, 1359, 1411
AlwI	GGATC	1 cut(s)	587
Aor13HI	TCCGGA	1 cut(s)	326
AoxI	GGCC	2 cut(s)	55, 1768
ApeKI	GCWGC	2 cut(s)	315, 1586
AseI	ATTAAT	1 cut(s)	1029
Asp700I	GAANNNNTTC	2 cut(s)	334, 737
AspLEI	GCGC	3 cut(s)	364, 1022, 1486
AspS9I	GGNCC	2 cut(s)	486, 1281
AsuC2I	CCSGG	1 cut(s)	320
AsuHPI	GGTGA	4 cut(s)	295, 671, 1087, 1571
AvaII	GGWCC	2 cut(s)	486, 1281
BbsI	GAAGAC	1 cut(s)	1515
BbvI	GCAGC	2 cut(s)	302, 1598
BccI	CCATC	9 cut(s)	649, 1048, 1054, 1130, 1150, 1393, 1445, 1498, 1516
BceAI	ACGGC	1 cut(s)	1033
BciT130I	CCWGG	1 cut(s)	1181
BclI	TGATCA	2 cut(s)	606, 1006
BcnI	CCSGG	1 cut(s)	320
BcoDI	GTCTC	4 cut(s)	195, 314, 1359, 1411
BfaI	CTAG	3 cut(s)	44, 1239, 1788
BfmI	CTRYAG	3 cut(s)	291, 1144, 1233
BisI	GCNGC	2 cut(s)	316, 1587
BlsI	GCNGC	2 cut(s)	317, 1588
Bme1390I	CCNGG	2 cut(s)	320, 1181
Bme18I	GGWCC	2 cut(s)	486, 1281
BmgT120I	GGNCC	2 cut(s)	486, 1281
BmiI	GGNNCC	3 cut(s)	245, 1178, 1314
BmrFI	CCNGG	2 cut(s)	320, 1181
BmsI	GCATC	4 cut(s)	841, 1074, 1573, 1737
BpiI	GAAGAC	1 cut(s)	1515
BpuEI	CTTGAG	2 cut(s)	491, 781
BpuMI	CCSGG	1 cut(s)	320
BsaAI	YACGTR	1 cut(s)	699
BsaI	GGTCTC	1 cut(s)	1411
BsaWI	WCCGGW	1 cut(s)	326
BsaXI	ACNNNNNCTCC	4 cut(s)	198, 228, 1356, 1386
Bsc4I	CCNNNNNNNGG	2 cut(s)	319, 326
Bse1I	ACTGG	1 cut(s)	932
BseAI	TCCGGA	1 cut(s)	326
BseBI	CCWGG	1 cut(s)	1181
BseGI	GGATG	4 cut(s)	904, 1161, 1189, 1588
BseLI	CCNNNNNNNGG	2 cut(s)	319, 326
BseMII	CTCAG	4 cut(s)	141, 190, 1184, 1335
BseNI	ACTGG	1 cut(s)	932
BseRI	GAGGAG	4 cut(s)	67, 642, 1283, 1514
BseXI	GCAGC	2 cut(s)	302, 1598
BsgI	GTGCAG	1 cut(s)	1213
Bsh1236I	CGCG	1 cut(s)	1022
Bsh1285I	CGRYCG	1 cut(s)	307
BshFI	GGCC	2 cut(s)	57, 1770
BsiEI	CGRYCG	1 cut(s)	307
BsiSI	CCGG	3 cut(s)	320, 327, 896
BslFI	GGGAC	1 cut(s)	1597
BslI	CCNNNNNNNGG	2 cut(s)	319, 326
BsmAI	GTCTC	4 cut(s)	195, 314, 1359, 1411
BsmBI	CGTCTC	2 cut(s)	195, 314
BsmFI	GGGAC	1 cut(s)	1597
BsmI	GAATGC	1 cut(s)	292
BsnI	GGCC	2 cut(s)	57, 1770
Bso31I	GGTCTC	1 cut(s)	1411
Bsp13I	TCCGGA	1 cut(s)	326
Bsp1407I	TGTACA	2 cut(s)	456, 1762
Bsp143I	GATC	6 cut(s)	304, 342, 553, 579, 606, 1006
BspACI	CCGC	5 cut(s)	47, 313, 410, 941, 1384
BspANI	GGCC	2 cut(s)	57, 1770
BspCNI	CTCAG	4 cut(s)	140, 189, 1183, 1334
BspEI	TCCGGA	1 cut(s)	326
BspFNI	CGCG	1 cut(s)	1022
BspHI	TCATGA	1 cut(s)	1603
BspLI	GGNNCC	3 cut(s)	245, 1178, 1314
BspMAI	CTGCAG	1 cut(s)	1148
BspPI	GGATC	1 cut(s)	587
BspTNI	GGTCTC	1 cut(s)	1411
BsrBI	CCGCTC	1 cut(s)	941
BsrGI	TGTACA	2 cut(s)	456, 1762
BsrI	ACTGG	1 cut(s)	932
BssMI	GATC	6 cut(s)	304, 342, 553, 579, 606, 1006
BssNAI	GTATAC	1 cut(s)	1221
Bst1107I	GTATAC	1 cut(s)	1221
Bst2UI	CCWGG	1 cut(s)	1181
Bst4CI	ACNGT	2 cut(s)	586, 1651
BstAUI	TGTACA	2 cut(s)	456, 1762
BstBAI	YACGTR	1 cut(s)	699
BstC8I	GCNNGC	4 cut(s)	242, 507, 1573, 1726
BstDEI	CTNAG	6 cut(s)	127, 176, 645, 1170, 1321, 1671
BstF5I	GGATG	4 cut(s)	904, 1161, 1189, 1588
BstFNI	CGCG	1 cut(s)	1022
BstHHI	GCGC	3 cut(s)	364, 1022, 1486
BstKTI	GATC	6 cut(s)	307, 345, 556, 582, 609, 1009
BstMAI	GTCTC	4 cut(s)	195, 314, 1359, 1411
BstMBI	GATC	6 cut(s)	304, 342, 553, 579, 606, 1006
BstMCI	CGRYCG	1 cut(s)	307
BstMWI	GCNNNNNNNGC	1 cut(s)	1043
BstNI	CCWGG	1 cut(s)	1181
BstSCI	CCNGG	2 cut(s)	318, 1179
BstSFI	CTRYAG	3 cut(s)	291, 1144, 1233
BstSNI	TACGTA	1 cut(s)	699
BstUI	CGCG	1 cut(s)	1022
BstV1I	GCAGC	2 cut(s)	302, 1598
BstV2I	GAAGAC	1 cut(s)	1515
BstZ17I	GTATAC	1 cut(s)	1221
BsuRI	GGCC	2 cut(s)	57, 1770
BtgZI	GCGATG	1 cut(s)	1530
BtsCI	GGATG	4 cut(s)	904, 1161, 1189, 1588
BtsIMutI	CAGTG	2 cut(s)	1127, 1329
Cac8I	GCNNGC	4 cut(s)	242, 507, 1573, 1726
CciI	TCATGA	1 cut(s)	1603
CfoI	GCGC	3 cut(s)	364, 1022, 1486
Cfr13I	GGNCC	2 cut(s)	486, 1281
Csp6I	GTAC	4 cut(s)	457, 1141, 1705, 1763
CviAII	CATG	5 cut(s)	224, 595, 1556, 1604, 1714
CviQI	GTAC	4 cut(s)	457, 1141, 1705, 1763
DdeI	CTNAG	6 cut(s)	127, 176, 645, 1170, 1321, 1671
DpnI	GATC	6 cut(s)	306, 344, 555, 581, 608, 1008
DpnII	GATC	6 cut(s)	304, 342, 553, 579, 606, 1006
DraI	TTTAAA	1 cut(s)	1252
Eco105I	TACGTA	1 cut(s)	699
Eco147I	AGGCCT	2 cut(s)	57, 1770
Eco31I	GGTCTC	1 cut(s)	1411
Eco32I	GATATC	1 cut(s)	6
Eco47I	GGWCC	2 cut(s)	486, 1281
Eco57I	CTGAAG	1 cut(s)	1496
EcoO109I	RGGNCCY	2 cut(s)	486, 1281
EcoRII	CCWGG	1 cut(s)	1179
EcoRV	GATATC	1 cut(s)	6
Esp3I	CGTCTC	2 cut(s)	195, 314
FaeI	CATG	5 cut(s)	227, 598, 1559, 1607, 1717
FalI	AAGNNNNNCTT	2 cut(s)	1268, 1300
FaqI	GGGAC	1 cut(s)	1597
FatI	CATG	5 cut(s)	223, 594, 1555, 1603, 1713
FauI	CCCGC	2 cut(s)	934, 1377
FbaI	TGATCA	2 cut(s)	606, 1006
FblI	GTMKAC	1 cut(s)	1220
Fnu4HI	GCNGC	2 cut(s)	316, 1587
FokI	GGATG	4 cut(s)	911, 1168, 1196, 1595
Fsp4HI	GCNGC	2 cut(s)	316, 1587
FspBI	CTAG	3 cut(s)	44, 1239, 1788
GlaI	GCGC	3 cut(s)	363, 1021, 1485
GluI	GCNGC	2 cut(s)	316, 1587
HaeIII	GGCC	2 cut(s)	57, 1770
HapII	CCGG	3 cut(s)	320, 327, 896
HhaI	GCGC	3 cut(s)	364, 1022, 1486
Hin1II	CATG	5 cut(s)	227, 598, 1559, 1607, 1717
Hin6I	GCGC	3 cut(s)	362, 1020, 1484
HinP1I	GCGC	3 cut(s)	362, 1020, 1484
HincII	GTYRAC	1 cut(s)	1290
HindII	GTYRAC	1 cut(s)	1290
HindIII	AAGCTT	1 cut(s)	1692
HinfI	GANTC	5 cut(s)	50, 261, 330, 368, 1529
HpaI	GTTAAC	1 cut(s)	1290
HpaII	CCGG	3 cut(s)	320, 327, 896
HphI	GGTGA	4 cut(s)	295, 671, 1087, 1571
Hpy166II	GTNNAC	7 cut(s)	298, 457, 910, 1221, 1290, 1472, 1536
Hpy188I	TCNGA	6 cut(s)	130, 179, 579, 1002, 1173, 1341
Hpy188III	TCNNGA	6 cut(s)	327, 346, 760, 1394, 1462, 1604
Hpy8I	GTNNAC	7 cut(s)	298, 457, 910, 1221, 1290, 1472, 1536
HpyAV	CCTTC	6 cut(s)	68, 727, 984, 1201, 1355, 1471
HpyCH4III	ACNGT	2 cut(s)	586, 1651
HpyCH4IV	ACGT	4 cut(s)	698, 1428, 1578, 1635
HpyCH4V	TGCA	7 cut(s)	240, 854, 1087, 1146, 1230, 1356, 1586
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1043
HpyF3I	CTNAG	6 cut(s)	127, 176, 645, 1170, 1321, 1671
HpySE526I	ACGT	4 cut(s)	698, 1428, 1578, 1635
Hsp92II	CATG	5 cut(s)	227, 598, 1559, 1607, 1717
HspAI	GCGC	3 cut(s)	362, 1020, 1484
Kpn2I	TCCGGA	1 cut(s)	326
Ksp22I	TGATCA	2 cut(s)	606, 1006
KspAI	GTTAAC	1 cut(s)	1290
Kzo9I	GATC	6 cut(s)	304, 342, 553, 579, 606, 1006
LmnI	GCTCC	2 cut(s)	249, 1318
Lsp1109I	GCAGC	2 cut(s)	302, 1598
LweI	GCATC	4 cut(s)	841, 1074, 1573, 1737
MaeI	CTAG	3 cut(s)	44, 1239, 1788
MaeII	ACGT	4 cut(s)	698, 1428, 1578, 1635
MaeIII	GTNAC	3 cut(s)	226, 1429, 1639
MalI	GATC	6 cut(s)	306, 344, 555, 581, 608, 1008
MbiI	CCGCTC	1 cut(s)	941
MboI	GATC	6 cut(s)	304, 342, 553, 579, 606, 1006
MboII	GAAGA	9 cut(s)	192, 286, 440, 491, 526, 784, 853, 1520, 1700
MluCI	AATT	7 cut(s)	931, 1098, 1253, 1446, 1653, 1700, 1753
MlyI	GAGTC	1 cut(s)	362
MroI	TCCGGA	1 cut(s)	326
MroXI	GAANNNNTTC	2 cut(s)	334, 737
MseI	TTAA	6 cut(s)	542, 750, 924, 1029, 1251, 1289
MslI	CAYNNNNRTG	3 cut(s)	728, 917, 1073
MspA1I	CMGCKG	1 cut(s)	315
MspI	CCGG	3 cut(s)	320, 327, 896
MspR9I	CCNGG	2 cut(s)	320, 1181
Mva1269I	GAATGC	1 cut(s)	292
MvaI	CCWGG	1 cut(s)	1181
MvnI	CGCG	1 cut(s)	1022
MwoI	GCNNNNNNNGC	1 cut(s)	1043
NciI	CCSGG	1 cut(s)	320
NdeII	GATC	6 cut(s)	304, 342, 553, 579, 606, 1006
NlaIII	CATG	5 cut(s)	227, 598, 1559, 1607, 1717
NlaIV	GGNNCC	3 cut(s)	245, 1178, 1314
NmuCI	GTSAC	1 cut(s)	1639
PagI	TCATGA	1 cut(s)	1603
PceI	AGGCCT	2 cut(s)	57, 1770
PcsI	WCGNNNNNNNCGW	1 cut(s)	704
PctI	GAATGC	1 cut(s)	292
PdmI	GAANNNNTTC	2 cut(s)	334, 737
PfeI	GAWTC	4 cut(s)	50, 261, 330, 1529
PfoI	TCCNGGA	1 cut(s)	1179
PkrI	GCNGC	2 cut(s)	317, 1588
Ple19I	CGATCG	1 cut(s)	307
PleI	GAGTC	1 cut(s)	362
PpsI	GAGTC	1 cut(s)	362
Ppu21I	YACGTR	1 cut(s)	699
PpuMI	RGGWCCY	2 cut(s)	486, 1281
PshBI	ATTAAT	1 cut(s)	1029
Psp1406I	AACGTT	1 cut(s)	1635
Psp5II	RGGWCCY	2 cut(s)	486, 1281
Psp6I	CCWGG	1 cut(s)	1179
PspGI	CCWGG	1 cut(s)	1179
PspN4I	GGNNCC	3 cut(s)	245, 1178, 1314
PspPI	GGNCC	2 cut(s)	486, 1281
PspPPI	RGGWCCY	2 cut(s)	486, 1281
PstI	CTGCAG	1 cut(s)	1148
PvuI	CGATCG	1 cut(s)	307
RsaI	GTAC	4 cut(s)	458, 1142, 1706, 1764
RsaNI	GTAC	4 cut(s)	457, 1141, 1705, 1763
RseI	CAYNNNNRTG	3 cut(s)	728, 917, 1073
SaqAI	TTAA	6 cut(s)	542, 750, 924, 1029, 1251, 1289
SatI	GCNGC	2 cut(s)	316, 1587
Sau3AI	GATC	6 cut(s)	304, 342, 553, 579, 606, 1006
Sau96I	GGNCC	2 cut(s)	486, 1281
SchI	GAGTC	1 cut(s)	362
ScrFI	CCNGG	2 cut(s)	320, 1181
SfaNI	GCATC	4 cut(s)	841, 1074, 1573, 1737
SfcI	CTRYAG	3 cut(s)	291, 1144, 1233
SinI	GGWCC	2 cut(s)	486, 1281
SmiMI	CAYNNNNRTG	3 cut(s)	728, 917, 1073
SmlI	CTYRAG	2 cut(s)	470, 760
SmoI	CTYRAG	2 cut(s)	470, 760
SnaBI	TACGTA	1 cut(s)	699
Sse9I	AATT	7 cut(s)	931, 1098, 1253, 1446, 1653, 1700, 1753
SseBI	AGGCCT	2 cut(s)	57, 1770
SsiI	CCGC	5 cut(s)	47, 313, 410, 941, 1384
SspMI	CTAG	3 cut(s)	44, 1239, 1788
StuI	AGGCCT	2 cut(s)	57, 1770
StyD4I	CCNGG	2 cut(s)	318, 1179
TaaI	ACNGT	2 cut(s)	586, 1651
TaiI	ACGT	4 cut(s)	701, 1431, 1581, 1638
TaqI	TCGA	4 cut(s)	345, 564, 917, 972
TasI	AATT	7 cut(s)	931, 1098, 1253, 1446, 1653, 1700, 1753
TatI	WGTACW	2 cut(s)	456, 1762
TfiI	GAWTC	4 cut(s)	50, 261, 330, 1529
Tru1I	TTAA	6 cut(s)	542, 750, 924, 1029, 1251, 1289
Tru9I	TTAA	6 cut(s)	542, 750, 924, 1029, 1251, 1289
TscAI	CASTG	2 cut(s)	1134, 1329
TseFI	GTSAC	1 cut(s)	1639
TseI	GCWGC	2 cut(s)	315, 1586
Tsp45I	GTSAC	1 cut(s)	1639
TspRI	CASTG	2 cut(s)	1134, 1329
VpaK11BI	GGWCC	2 cut(s)	486, 1281
VspI	ATTAAT	1 cut(s)	1029
XmiI	GTMKAC	1 cut(s)	1220
XmnI	GAANNNNTTC	2 cut(s)	334, 737
XspI	CTAG	3 cut(s)	44, 1239, 1788

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.