No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g38261 |
| rosa_multiflora | Rmu_sc0002048.1_g000001 Rmu_sc0002048.1_g000003 Rmu_sc0004976.1_g000001 Rmu_sc0025549.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00421920 |
| rosa_samantha | Rh2AG511100 Rh2BG521800 Rh2CG496200 Rh2DG531700 |
| rosa_wichuraiana | Rw2G042010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 35 |
| AciI | CCGC | 2 cut(s) | 35, 79 |
| AclI | AACGTT | 1 cut(s) | 21 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 34 |
| AgsI | TTSAA | 1 cut(s) | 85 |
| AluBI | AGCT | 1 cut(s) | 114 |
| AluI | AGCT | 1 cut(s) | 114 |
| Ama87I | CYCGRG | 1 cut(s) | 122 |
| AseI | ATTAAT | 1 cut(s) | 195 |
| AvaI | CYCGRG | 1 cut(s) | 122 |
| BccI | CCATC | 1 cut(s) | 176 |
| BmeT110I | CYCGRG | 1 cut(s) | 122 |
| BmsI | GCATC | 1 cut(s) | 66 |
| BsaBI | GATNNNNATC | 1 cut(s) | 195 |
| BsaJI | CCNNGG | 1 cut(s) | 6 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 46, 76 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 34 |
| Bse8I | GATNNNNATC | 1 cut(s) | 195 |
| BseDI | CCNNGG | 1 cut(s) | 6 |
| BseJI | GATNNNNATC | 1 cut(s) | 195 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 34 |
| Bsh1236I | CGCG | 1 cut(s) | 35 |
| BsiHKCI | CYCGRG | 1 cut(s) | 122 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 34 |
| BsoBI | CYCGRG | 1 cut(s) | 122 |
| Bsp143I | GATC | 1 cut(s) | 118 |
| BspACI | CCGC | 2 cut(s) | 35, 79 |
| BspFNI | CGCG | 1 cut(s) | 35 |
| BssECI | CCNNGG | 1 cut(s) | 6 |
| BssMI | GATC | 1 cut(s) | 118 |
| BstFNI | CGCG | 1 cut(s) | 35 |
| BstKTI | GATC | 1 cut(s) | 121 |
| BstMBI | GATC | 1 cut(s) | 118 |
| BstUI | CGCG | 1 cut(s) | 35 |
| CseI | GACGC | 1 cut(s) | 41 |
| CviAII | CATG | 1 cut(s) | 204 |
| CviJI | RGCY | 1 cut(s) | 114 |
| CviKI_1 | RGCY | 1 cut(s) | 114 |
| DpnI | GATC | 1 cut(s) | 120 |
| DpnII | GATC | 1 cut(s) | 118 |
| Eco88I | CYCGRG | 1 cut(s) | 122 |
| FaeI | CATG | 1 cut(s) | 207 |
| FaiI | YATR | 3 cut(s) | 117, 189, 205 |
| FatI | CATG | 1 cut(s) | 203 |
| HgaI | GACGC | 1 cut(s) | 41 |
| Hin1II | CATG | 1 cut(s) | 207 |
| HincII | GTYRAC | 2 cut(s) | 25, 148 |
| HindII | GTYRAC | 2 cut(s) | 25, 148 |
| Hpy166II | GTNNAC | 3 cut(s) | 13, 25, 148 |
| Hpy188III | TCNNGA | 2 cut(s) | 161, 179 |
| Hpy8I | GTNNAC | 3 cut(s) | 13, 25, 148 |
| Hpy99I | CGWCG | 1 cut(s) | 35 |
| HpyCH4IV | ACGT | 1 cut(s) | 21 |
| HpySE526I | ACGT | 1 cut(s) | 21 |
| Hsp92II | CATG | 1 cut(s) | 207 |
| Kzo9I | GATC | 1 cut(s) | 118 |
| LpnPI | CCDG | 1 cut(s) | 174 |
| LweI | GCATC | 1 cut(s) | 66 |
| MaeII | ACGT | 1 cut(s) | 21 |
| MalI | GATC | 1 cut(s) | 120 |
| MboI | GATC | 1 cut(s) | 118 |
| MboII | GAAGA | 1 cut(s) | 191 |
| MnlI | CCTC | 1 cut(s) | 72 |
| MseI | TTAA | 2 cut(s) | 129, 195 |
| MvnI | CGCG | 1 cut(s) | 35 |
| NdeII | GATC | 1 cut(s) | 118 |
| NlaIII | CATG | 1 cut(s) | 207 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 27 |
| PshBI | ATTAAT | 1 cut(s) | 195 |
| Psp1406I | AACGTT | 1 cut(s) | 21 |
| SaqAI | TTAA | 2 cut(s) | 129, 195 |
| Sau3AI | GATC | 1 cut(s) | 118 |
| SetI | ASST | 3 cut(s) | 12, 24, 116 |
| SfaNI | GCATC | 1 cut(s) | 66 |
| SgeI | CNNG | 8 cut(s) | 19, 41, 46, 97, 134, 136, 173, 191 |
| SsiI | CCGC | 2 cut(s) | 35, 79 |
| TaiI | ACGT | 1 cut(s) | 24 |
| TaqII | GACCGA | 1 cut(s) | 20 |
| Tru1I | TTAA | 2 cut(s) | 129, 195 |
| Tru9I | TTAA | 2 cut(s) | 129, 195 |
| VspI | ATTAAT | 1 cut(s) | 195 |