Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD05G1130100.v1.1 MD05G1130200.v1.1 |
| rosa_multiflora | Rmu_sc0000258.1_g000017 |
| rosa_roxburghii | Rroxscaffold_7G00189760 Rroxscaffold_7G00190040 |
| rosa_samantha | Rh6BG231000 Rh7DG059100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 60 |
| AccIII | TCCGGA | 1 cut(s) | 517 |
| AciI | CCGC | 3 cut(s) | 11, 158, 321 |
| AcsI | RAATTY | 1 cut(s) | 381 |
| AcuI | CTGAAG | 1 cut(s) | 60 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 332 |
| AgsI | TTSAA | 3 cut(s) | 177, 400, 459 |
| AjnI | CCWGG | 2 cut(s) | 217, 256 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 221, 253 |
| AluBI | AGCT | 5 cut(s) | 38, 308, 313, 406, 446 |
| AluI | AGCT | 5 cut(s) | 38, 308, 313, 406, 446 |
| Alw26I | GTCTC | 1 cut(s) | 519 |
| Aor13HI | TCCGGA | 1 cut(s) | 517 |
| AoxI | GGCC | 2 cut(s) | 299, 323 |
| ApeKI | GCWGC | 3 cut(s) | 122, 149, 245 |
| ApoI | RAATTY | 1 cut(s) | 381 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 53, 85 |
| AspS9I | GGNCC | 2 cut(s) | 299, 323 |
| AsuC2I | CCSGG | 1 cut(s) | 327 |
| AsuHPI | GGTGA | 1 cut(s) | 233 |
| BanII | GRGCYC | 1 cut(s) | 212 |
| BbsI | GAAGAC | 1 cut(s) | 348 |
| BbvI | GCAGC | 3 cut(s) | 109, 161, 257 |
| BciT130I | CCWGG | 2 cut(s) | 219, 258 |
| BcnI | CCSGG | 1 cut(s) | 327 |
| BcoDI | GTCTC | 1 cut(s) | 519 |
| BfaI | CTAG | 1 cut(s) | 105 |
| BfmI | CTRYAG | 1 cut(s) | 303 |
| BisI | GCNGC | 3 cut(s) | 123, 150, 246 |
| BlpI | GCTNAGC | 1 cut(s) | 309 |
| BlsI | GCNGC | 3 cut(s) | 124, 151, 247 |
| Bme1390I | CCNGG | 3 cut(s) | 219, 258, 327 |
| BmgT120I | GGNCC | 2 cut(s) | 299, 323 |
| BmrFI | CCNGG | 3 cut(s) | 219, 258, 327 |
| BmsI | GCATC | 2 cut(s) | 146, 381 |
| BpiI | GAAGAC | 1 cut(s) | 348 |
| BpmI | CTGGAG | 1 cut(s) | 240 |
| Bpu10I | CCTNAGC | 1 cut(s) | 356 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 309 |
| BpuMI | CCSGG | 1 cut(s) | 327 |
| BsaJI | CCNNGG | 3 cut(s) | 153, 257, 326 |
| BsaWI | WCCGGW | 1 cut(s) | 517 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 499 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 332 |
| BseAI | TCCGGA | 1 cut(s) | 517 |
| BseBI | CCWGG | 2 cut(s) | 219, 258 |
| BseDI | CCNNGG | 3 cut(s) | 153, 257, 326 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 332 |
| BseMII | CTCAG | 3 cut(s) | 42, 368, 370 |
| BseRI | GAGGAG | 1 cut(s) | 89 |
| BseXI | GCAGC | 3 cut(s) | 109, 161, 257 |
| BshFI | GGCC | 2 cut(s) | 301, 325 |
| BsiSI | CCGG | 2 cut(s) | 326, 518 |
| BslFI | GGGAC | 1 cut(s) | 5 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 332 |
| BsmAI | GTCTC | 1 cut(s) | 519 |
| BsmFI | GGGAC | 1 cut(s) | 5 |
| BsmI | GAATGC | 2 cut(s) | 13, 248 |
| BsnI | GGCC | 2 cut(s) | 301, 325 |
| Bsp1286I | GDGCHC | 1 cut(s) | 212 |
| Bsp13I | TCCGGA | 1 cut(s) | 517 |
| Bsp143I | GATC | 2 cut(s) | 409, 504 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 309 |
| BspACI | CCGC | 3 cut(s) | 11, 158, 321 |
| BspANI | GGCC | 2 cut(s) | 301, 325 |
| BspCNI | CTCAG | 3 cut(s) | 41, 369, 369 |
| BspEI | TCCGGA | 1 cut(s) | 517 |
| BssECI | CCNNGG | 3 cut(s) | 153, 257, 326 |
| BssMI | GATC | 2 cut(s) | 409, 504 |
| BssT1I | CCWWGG | 1 cut(s) | 153 |
| Bst2UI | CCWGG | 2 cut(s) | 219, 258 |
| Bst4CI | ACNGT | 2 cut(s) | 7, 144 |
| BstC8I | GCNNGC | 2 cut(s) | 323, 444 |
| BstDEI | CTNAG | 4 cut(s) | 28, 309, 356, 377 |
| BstKTI | GATC | 2 cut(s) | 412, 507 |
| BstMAI | GTCTC | 1 cut(s) | 519 |
| BstMBI | GATC | 2 cut(s) | 409, 504 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 155 |
| BstNI | CCWGG | 2 cut(s) | 219, 258 |
| BstSCI | CCNGG | 3 cut(s) | 217, 256, 325 |
| BstSFI | CTRYAG | 1 cut(s) | 303 |
| BstV1I | GCAGC | 3 cut(s) | 109, 161, 257 |
| BstV2I | GAAGAC | 1 cut(s) | 348 |
| BsuRI | GGCC | 2 cut(s) | 301, 325 |
| BtsIMutI | CAGTG | 2 cut(s) | 36, 171 |
| Cac8I | GCNNGC | 2 cut(s) | 323, 444 |
| Cfr13I | GGNCC | 2 cut(s) | 299, 323 |
| CviAII | CATG | 1 cut(s) | 490 |
| DdeI | CTNAG | 4 cut(s) | 28, 309, 356, 377 |
| DpnI | GATC | 2 cut(s) | 411, 506 |
| DpnII | GATC | 2 cut(s) | 409, 504 |
| Eco130I | CCWWGG | 1 cut(s) | 153 |
| Eco24I | GRGCYC | 1 cut(s) | 212 |
| Eco57I | CTGAAG | 1 cut(s) | 60 |
| EcoO109I | RGGNCCY | 1 cut(s) | 299 |
| EcoRII | CCWGG | 2 cut(s) | 217, 256 |
| EcoT14I | CCWWGG | 1 cut(s) | 153 |
| EcoT38I | GRGCYC | 1 cut(s) | 212 |
| ErhI | CCWWGG | 1 cut(s) | 153 |
| FaeI | CATG | 1 cut(s) | 493 |
| FaiI | YATR | 3 cut(s) | 296, 305, 491 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 451, 483 |
| FaqI | GGGAC | 1 cut(s) | 5 |
| FatI | CATG | 1 cut(s) | 489 |
| FauI | CCCGC | 1 cut(s) | 314 |
| FblI | GTMKAC | 1 cut(s) | 60 |
| Fnu4HI | GCNGC | 3 cut(s) | 123, 150, 246 |
| FriOI | GRGCYC | 1 cut(s) | 212 |
| Fsp4HI | GCNGC | 3 cut(s) | 123, 150, 246 |
| FspBI | CTAG | 1 cut(s) | 105 |
| GluI | GCNGC | 3 cut(s) | 123, 150, 246 |
| GsuI | CTGGAG | 1 cut(s) | 240 |
| HaeIII | GGCC | 2 cut(s) | 301, 325 |
| HapII | CCGG | 2 cut(s) | 326, 518 |
| Hin1II | CATG | 1 cut(s) | 493 |
| HinfI | GANTC | 1 cut(s) | 512 |
| HpaII | CCGG | 2 cut(s) | 326, 518 |
| HphI | GGTGA | 1 cut(s) | 233 |
| Hpy166II | GTNNAC | 2 cut(s) | 61, 130 |
| Hpy188I | TCNGA | 3 cut(s) | 390, 414, 435 |
| Hpy188III | TCNNGA | 1 cut(s) | 518 |
| Hpy8I | GTNNAC | 2 cut(s) | 61, 130 |
| HpyAV | CCTTC | 1 cut(s) | 223 |
| HpyCH4III | ACNGT | 2 cut(s) | 7, 144 |
| HpyCH4V | TGCA | 3 cut(s) | 245, 394, 501 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 155 |
| HpyF3I | CTNAG | 4 cut(s) | 28, 309, 356, 377 |
| Hsp92II | CATG | 1 cut(s) | 493 |
| Kpn2I | TCCGGA | 1 cut(s) | 517 |
| Kzo9I | GATC | 2 cut(s) | 409, 504 |
| Lsp1109I | GCAGC | 3 cut(s) | 109, 161, 257 |
| LweI | GCATC | 2 cut(s) | 146, 381 |
| MaeI | CTAG | 1 cut(s) | 105 |
| MaeIII | GTNAC | 2 cut(s) | 46, 78 |
| MalI | GATC | 2 cut(s) | 411, 506 |
| MboI | GATC | 2 cut(s) | 409, 504 |
| MboII | GAAGA | 3 cut(s) | 53, 353, 411 |
| MhlI | GDGCHC | 1 cut(s) | 212 |
| MluCI | AATT | 3 cut(s) | 201, 348, 381 |
| MlyI | GAGTC | 1 cut(s) | 521 |
| MnlI | CCTC | 4 cut(s) | 67, 325, 362, 514 |
| MroI | TCCGGA | 1 cut(s) | 517 |
| MseI | TTAA | 1 cut(s) | 200 |
| MspI | CCGG | 2 cut(s) | 326, 518 |
| MspR9I | CCNGG | 3 cut(s) | 219, 258, 327 |
| Mva1269I | GAATGC | 2 cut(s) | 13, 248 |
| MvaI | CCWGG | 2 cut(s) | 219, 258 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 155 |
| NciI | CCSGG | 1 cut(s) | 327 |
| NdeII | GATC | 2 cut(s) | 409, 504 |
| NlaIII | CATG | 1 cut(s) | 493 |
| PctI | GAATGC | 2 cut(s) | 13, 248 |
| PkrI | GCNGC | 3 cut(s) | 124, 151, 247 |
| PleI | GAGTC | 1 cut(s) | 520 |
| PpsI | GAGTC | 1 cut(s) | 520 |
| Psp6I | CCWGG | 2 cut(s) | 217, 256 |
| PspGI | CCWGG | 2 cut(s) | 217, 256 |
| PspPI | GGNCC | 2 cut(s) | 299, 323 |
| SaqAI | TTAA | 1 cut(s) | 200 |
| SatI | GCNGC | 3 cut(s) | 123, 150, 246 |
| Sau3AI | GATC | 2 cut(s) | 409, 504 |
| Sau96I | GGNCC | 2 cut(s) | 299, 323 |
| SchI | GAGTC | 1 cut(s) | 521 |
| ScrFI | CCNGG | 3 cut(s) | 219, 258, 327 |
| SduI | GDGCHC | 1 cut(s) | 212 |
| SetI | ASST | 6 cut(s) | 40, 234, 310, 315, 408, 448 |
| SfaNI | GCATC | 2 cut(s) | 146, 381 |
| SfcI | CTRYAG | 1 cut(s) | 303 |
| Sse9I | AATT | 3 cut(s) | 201, 348, 381 |
| SsiI | CCGC | 3 cut(s) | 11, 158, 321 |
| SspI | AATATT | 1 cut(s) | 181 |
| SspMI | CTAG | 1 cut(s) | 105 |
| StyD4I | CCNGG | 3 cut(s) | 217, 256, 325 |
| StyI | CCWWGG | 1 cut(s) | 153 |
| TaaI | ACNGT | 2 cut(s) | 7, 144 |
| TaqI | TCGA | 1 cut(s) | 408 |
| TasI | AATT | 3 cut(s) | 201, 348, 381 |
| Tru1I | TTAA | 1 cut(s) | 200 |
| Tru9I | TTAA | 1 cut(s) | 200 |
| TscAI | CASTG | 2 cut(s) | 36, 171 |
| TseI | GCWGC | 3 cut(s) | 122, 149, 245 |
| TspDTI | ATGAA | 1 cut(s) | 111 |
| TspRI | CASTG | 2 cut(s) | 36, 171 |
| XapI | RAATTY | 1 cut(s) | 381 |
| XmiI | GTMKAC | 1 cut(s) | 60 |
| XspI | CTAG | 1 cut(s) | 105 |