Rroxscaffold_7G00192010
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0016498
Physical Location & Seq
Reverse (-)
32970879 .. 32974264
3386 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00192010.1

Sequence Viewer

Length: 2517 bp
ATGATCCATGCAAATGGGATTATATCAGATGTTCTGAAGGGATTTGTTTCAGAAATCACAATAACCTCAATCAATATACAAACCAGGTTCCCCATCCAGCTACTCACCTTTAATCATCTCACCACCCTTGTAATCTCAAACGCCAACCTCAGTGGAGAAATTCCACAGGCAATTGGAAACTTGTCATCACTCATCACCCTGGATCTCAGCTTCAATGCTCTAAGAGGTTACATCCCACAGGAGATGGGAAAATTATCACAACTGCAGTTGTTATCACTGAATTCAAATTCCTTGGATGGTGCAATTCCAAGAGAAATTGGAAACTGTTCAGAGCTTCAACAACTTGAACTGTATGATAACCAGCTATCTGGAAAGATTCCTGCTGAAATAGGCCAGTTGTGGGCTCTGGAAATCTTCCGTGCAGGCGGGAATCCTGACATTCAAGGTGAAATTCCAATGCAGATATCAAACTGCAAGGGACTAACTTTCCTTGGCCTTGCAGCTACAGGAATCACGGGGAAAATTCCAAGCAGCATAGGAGAACTTAAGAATCTCCAAACTCTTTCAATTTATACTGCAAATCTCTCAGGTGAGATTCCACCAGAAATTGGTAACTGTTCAGCCTTAGAAAATTTGTTTCTGTATGATAACCAGCTTGCTGGTCAAATTCCTGGTGAACTTGGTTTGTTGAAAAAACTCAGAAGAGTGCTACTGTGGAAGAACAATCTTAATGGAGGCATCCCAGACACACTAGGGAACTGTTCAAAATTGAAAGTAGTCGATTTCTCGTTGAATCTTCTGAGTGGTGAGGTTCCTTTGTCTCTTGCAAATTTGGTGGCATTGGAGGAGCTTCTTCTATCTGAGAATCAGATATCAGGCAGCATACCGCCTTTACTTGGAAAATTTTCCAGTTTAAAGCAACTGGAATTGGATAACAACAGATTTTCGGGTACAATTCCAGCTGTCATTGGGCAACTAAAAGAACTTACTCTTTTCTTTGCCTGGCAGAATCAGCTCCAAGGAAGCATACCAACTGAGCTGGCCAACTGTCAGAAACTTCAAGCATTGGATCTCTCACACAATCTCCTCAGTGGGTCAGTGCCAAGTTCTCTGTTTGACCTCAAGAACTTAACACAACTGTTGCTGATTTCAAATGAGTTTTCAGGACAACTTCCAACCAATATTGGTAACTGTACCAATTTGATCCGCTTACGCCTTGGATCAAACAACTTCACAGGTCAGATACCATCCGAAATTCGGCTCCTGCAGAGATTGAGCTTCCTAGAATTGTCAGAAAATCATTTTACTGGGAAAATTCCCCCTGAAATAGGACACTGCTCCCACCTAGAAATGGTTGATTTGCATGGAAATGAGCTCCGAGGCAGGATTCCTTCGTCTTTCCAATTCCTTACTGGTCTTAATGTTTTAGACCTGTCCATGAACCAAATAGAAGGCACAGTTCCTGAACATCTGGGGAAGCTGAAATCCTTGAACAAACTGGTGGTCAATGGAAACTACATTACTGGTTCCATTCCCAAGTCATTGAGCCTCTGTAGGGATTTGCAGTTGTTGGAACTGAGCAGCAACAGACTTACAGGCTCTATCCCAGATGAGATTGGACACTTGCAAGGGCTCGATATTCTCTTGAATCTGAGCTGGAATTCTCTGACGGGCCCCATTCCAGAAAGCTTCTCAAATCTCTCAAAACTTGCCACTATGGATCTCTCCCACAATATGCTGACAGGAAGCCTGAAAGTGCTGGGGGATCTGGACAACCTCGTCTCCCTGAATGTCTCATACAATGACTTTTCAGGTCTACTTCCCAGTACTAATTTTTTCAAAGATCTTCCACCAACTGCATTTGCTGGTAATCACGATGTAACTGCAACTATATTTCTTATGCTTGCTGGAATAGCTTTGTTTGTCAGAGTCTGGGGAATCACATTTGGGATTACGAACAGTAAAGAAGAAAATGATTCGGTGTGGGATTTCACCCCATTTCAAAAGCTTGATTTTGCAAATGCTGCAGAGTTTCCAACACAGTTGCAGGTTCTTATGGAATATGGATACAGTTTGAGGATCACAGAAAAGAGTGACGTGTATAGCTATGGAGTGGTGCTCCTAGAGGTCCTAACAGGGAAGGAACCAACAGATAACAAGATTCCAGAGGGTGATCATATTGTCACTTGGGTTAATAAGGAACTTAGAGAGAGAAAAAGAGAATTCACATCAATTGTTGATCATCAGCTAATACTGAGATCAGGGACACAAATTCAAGAAATGCTTCAAGTTCTTGGGGTAGCTCTTCTCTGTGTTAATCCCTGCCCAGAGGAAAGGCCGACAATGAAAGATGTAACAGCAATGCTCAATGAGATCAAGCATGAAAATGAAGATTGTGAAAAACCAAATTTTCTCGGCCAAGGAGCTGTGACAAACAGGAAAACTGCAGTTTACAGTTCTAGTTTCTCCAGGTCATCTGAACCTCTAATTGGTTCACCTTCTTGTTTTCCCAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase

Protein Analysis

838

Amino Acids

91.82

Weight (kDa)

5.16

Isoelectric Point (pI)

27.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 37 - 139 1.4e-10 Leucine-rich repeat region
LRR_8 PF13855 39 - 98 7.1e-08 Leucine rich repeat
LRR_14 PF23598 154 - 261 5.5e-09 Leucine-rich repeat region
LRR_8 PF13855 232 - 291 6.8e-06 Leucine rich repeat
LRR_14 PF23598 418 - 501 1e-07 Leucine-rich repeat region
LRR_8 PF13855 447 - 507 2.6e-08 Leucine rich repeat
LRR_8 PF13855 549 - 603 3.1e-06 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 692 - 788 8.5e-06 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016498)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g14410
malus_domestica MD05G1018000.v1.1
prunus_persica Prupe.8G022000_v2.0.a1
pyrus_communis pycom05g01070
rosa_chinensis RchiOBHm_Chr6g0276741
rosa_laevigata RLG00000013367
rosa_multiflora Rmu_sc0004481.1_g000026
rosa_roxburghii Rroxscaffold_7G00192010
rosa_rugosa Rorug06G0103400
rosa_samantha Rh6AG213800 Rh6BG218600 Rh6CG221600 Rh6DG211300
rosa_wichuraiana Rw6G018690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1778
Acc36I ACCTGC 1 cut(s) 2038
AccB7I CCANNNNNTGG 1 cut(s) 608
AccI GTMKAC 1 cut(s) 1816
AciI CCGC 3 cut(s) 426, 887, 1207
AclWI GGATC 7 cut(s) 210, 1077, 1198, 1228, 1728, 1773, 2087
AcoI YGGCCR 2 cut(s) 1041, 2416
AcuI CTGAAG 1 cut(s) 56
AfaI GTAC 3 cut(s) 952, 1195, 1828
AfiI CCNNNNNNNGG 8 cut(s) 400, 608, 896, 1257, 1328, 1351, 1555, 2489
AflII CTTAAG 1 cut(s) 545
AflIII ACRYGT 1 cut(s) 2097
AjiI CACGTC 1 cut(s) 2098
AjnI CCWGG 5 cut(s) 83, 198, 670, 1001, 2468
AjuI GAANNNNNNNTTGG 2 cut(s) 2472, 2504
Alw21I GWGCWC 2 cut(s) 1377, 2121
Alw26I GTCTC 3 cut(s) 825, 1786, 1798
AlwI GGATC 7 cut(s) 210, 1077, 1198, 1228, 1728, 1773, 2087
AlwNI CAGNNNCTG 2 cut(s) 1463, 1932
AoxI GGCC 6 cut(s) 391, 493, 1041, 1672, 2336, 2416
ApaI GGGCCC 1 cut(s) 1676
ApeKI GCWGC 5 cut(s) 500, 531, 879, 1581, 2024
ArsI GACNNNNNNTTYG 2 cut(s) 1488, 1520
Asp700I GAANNNNTTC 3 cut(s) 325, 904, 2283
AspS9I GGNCC 3 cut(s) 1672, 1673, 2128
AvaII GGWCC 1 cut(s) 2128
BaeGI GKGCMC 1 cut(s) 1676
BalI TGGCCA 1 cut(s) 1043
BanII GRGCYC 4 cut(s) 406, 1377, 1635, 1676
Bbv12I GWGCWC 2 cut(s) 1377, 2121
BbvI GCAGC 5 cut(s) 512, 543, 891, 1593, 2011
BccI CCATC 4 cut(s) 101, 238, 290, 1255
BcgI CGANNNNNNTGC 2 cut(s) 1865, 1899
BciT130I CCWGG 5 cut(s) 85, 200, 672, 1003, 2470
BciVI GTATCC 1 cut(s) 2060
BclI TGATCA 2 cut(s) 2173, 2239
BcoDI GTCTC 3 cut(s) 825, 1786, 1798
BfaI CTAG 5 cut(s) 752, 1283, 1346, 2123, 2460
BfmI CTRYAG 6 cut(s) 263, 504, 1265, 1552, 2025, 2445
BfrI CTTAAG 1 cut(s) 545
BfuAI ACCTGC 1 cut(s) 2038
BfuI GTATCC 1 cut(s) 2060
BglII AGATCT 1 cut(s) 1843
BisI GCNGC 5 cut(s) 501, 532, 880, 1582, 2025
BlsI GCNGC 5 cut(s) 502, 533, 881, 1583, 2026
BmcAI AGTACT 1 cut(s) 1828
Bme1390I CCNGG 5 cut(s) 85, 200, 672, 1003, 2470
Bme18I GGWCC 1 cut(s) 2128
BmgBI CACGTC 1 cut(s) 2098
BmgT120I GGNCC 3 cut(s) 1672, 1673, 2128
BmiI GGNNCC 7 cut(s) 89, 813, 1262, 1528, 1674, 1675, 2145
BmrFI CCNGG 5 cut(s) 85, 200, 672, 1003, 2470
BmrI ACTGGG 2 cut(s) 1317, 1818
BmsI GCATC 1 cut(s) 747
BmuI ACTGGG 2 cut(s) 1317, 1818
BplI GAGNNNNNCTC 2 cut(s) 2103, 2135
BpmI CTGGAG 1 cut(s) 2452
BpuEI CTTGAG 1 cut(s) 1106
BsaJI CCNNGG 7 cut(s) 198, 291, 490, 1018, 1216, 1378, 2419
BsaXI ACNNNNNCTCC 4 cut(s) 1068, 1098, 1766, 1796
Bsc4I CCNNNNNNNGG 8 cut(s) 400, 608, 896, 1257, 1328, 1351, 1555, 2489
Bse1I ACTGG 8 cut(s) 394, 909, 927, 1312, 1417, 1503, 1528, 1824
Bse3DI GCAATG 1 cut(s) 2367
BseBI CCWGG 5 cut(s) 85, 200, 672, 1003, 2470
BseDI CCNNGG 7 cut(s) 198, 291, 490, 1018, 1216, 1378, 2419
BseGI GGATG 5 cut(s) 93, 231, 301, 738, 1247
BseLI CCNNNNNNNGG 8 cut(s) 400, 608, 896, 1257, 1328, 1351, 1555, 2489
BseMI GCAATG 1 cut(s) 2367
BseNI ACTGG 8 cut(s) 394, 909, 927, 1312, 1417, 1503, 1528, 1824
BseRI GAGGAG 2 cut(s) 860, 1076
BseSI GKGCMC 1 cut(s) 1676
BseXI GCAGC 5 cut(s) 512, 543, 891, 1593, 2011
BseYI CCCAGC 1 cut(s) 1759
BsgI GTGCAG 1 cut(s) 441
BshFI GGCC 6 cut(s) 393, 495, 1043, 1674, 2338, 2418
BsiHKAI GWGCWC 2 cut(s) 1377, 2121
BslFI GGGAC 2 cut(s) 492, 2278
BslI CCNNNNNNNGG 8 cut(s) 400, 608, 896, 1257, 1328, 1351, 1555, 2489
BsmAI GTCTC 3 cut(s) 825, 1786, 1798
BsmBI CGTCTC 1 cut(s) 1786
BsmFI GGGAC 2 cut(s) 492, 2278
BsnI GGCC 6 cut(s) 393, 495, 1043, 1674, 2338, 2418
Bsp120I GGGCCC 1 cut(s) 1672
Bsp1286I GDGCHC 5 cut(s) 406, 1377, 1635, 1676, 2121
BspACI CCGC 3 cut(s) 426, 887, 1207
BspANI GGCC 6 cut(s) 393, 495, 1043, 1674, 2338, 2418
BspLI GGNNCC 7 cut(s) 89, 813, 1262, 1528, 1674, 1675, 2145
BspMAI CTGCAG 4 cut(s) 267, 1269, 2029, 2449
BspMI ACCTGC 1 cut(s) 2038
BspPI GGATC 7 cut(s) 210, 1077, 1198, 1228, 1728, 1773, 2087
BspQI GCTCTTC 1 cut(s) 2310
BspTI CTTAAG 1 cut(s) 545
BsrDI GCAATG 1 cut(s) 2367
BsrI ACTGG 8 cut(s) 394, 909, 927, 1312, 1417, 1503, 1528, 1824
BssECI CCNNGG 7 cut(s) 198, 291, 490, 1018, 1216, 1378, 2419
BssT1I CCWWGG 5 cut(s) 291, 490, 1018, 1216, 2419
Bst2UI CCWGG 5 cut(s) 85, 200, 672, 1003, 2470
Bst6I CTCTTC 2 cut(s) 697, 2310
BstAFI CTTAAG 1 cut(s) 545
BstAPI GCANNNNNTGC 1 cut(s) 2024
BstC8I GCNNGC 4 cut(s) 424, 657, 1041, 1905
BstENI CCTNNNNNAGG 1 cut(s) 1326
BstF5I GGATG 5 cut(s) 93, 231, 301, 738, 1247
BstMAI GTCTC 3 cut(s) 825, 1786, 1798
BstMWI GCNNNNNNNGC 3 cut(s) 1012, 1913, 2024
BstNI CCWGG 5 cut(s) 85, 200, 672, 1003, 2470
BstSCI CCNGG 5 cut(s) 83, 198, 670, 1001, 2468
BstSFI CTRYAG 6 cut(s) 263, 504, 1265, 1552, 2025, 2445
BstSLI GKGCMC 1 cut(s) 1676
BstV1I GCAGC 5 cut(s) 512, 543, 891, 1593, 2011
BstX2I RGATCY 5 cut(s) 202, 1069, 1720, 1765, 1843
BstXI CCANNNNNNTGG 3 cut(s) 14, 368, 659
BstYI RGATCY 5 cut(s) 202, 1069, 1720, 1765, 1843
BsuI GTATCC 1 cut(s) 2060
BsuRI GGCC 6 cut(s) 393, 495, 1043, 1674, 2338, 2418
BtrI CACGTC 1 cut(s) 2098
BtsCI GGATG 5 cut(s) 93, 231, 301, 738, 1247
BtsI GCAGTG 1 cut(s) 1333
BtsIMutI CAGTG 5 cut(s) 157, 275, 1096, 1104, 1333
BveI ACCTGC 1 cut(s) 2038
Cac8I GCNNGC 4 cut(s) 424, 657, 1041, 1905
CaiI CAGNNNCTG 2 cut(s) 1463, 1932
Cfr13I GGNCC 3 cut(s) 1672, 1673, 2128
CsiI ACCWGGT 1 cut(s) 83
Csp6I GTAC 3 cut(s) 951, 1194, 1827
CspCI CAANNNNNGTGG 4 cut(s) 133, 168, 816, 851
CviAII CATG 4 cut(s) 8, 1364, 1438, 2381
CviQI GTAC 3 cut(s) 951, 1194, 1827
DraI TTTAAA 1 cut(s) 915
DrdI GACNNNNNNGTC 1 cut(s) 1778
DseDI GACNNNNNNGTC 1 cut(s) 1778
EaeI YGGCCR 2 cut(s) 1041, 2416
Eam1104I CTCTTC 2 cut(s) 697, 2310
EarI CTCTTC 2 cut(s) 697, 2310
Ecl136II GAGCTC 1 cut(s) 1375
Eco130I CCWWGG 5 cut(s) 291, 490, 1018, 1216, 2419
Eco24I GRGCYC 4 cut(s) 406, 1377, 1635, 1676
Eco32I GATATC 2 cut(s) 465, 873
Eco47I GGWCC 1 cut(s) 2128
Eco53kI GAGCTC 1 cut(s) 1375
Eco57I CTGAAG 1 cut(s) 56
EcoICRI GAGCTC 1 cut(s) 1375
EcoNI CCTNNNNNAGG 1 cut(s) 1326
EcoO109I RGGNCCY 2 cut(s) 1673, 2128
EcoRI GAATTC 3 cut(s) 280, 1660, 2222
EcoRII CCWGG 5 cut(s) 83, 198, 670, 1001, 2468
EcoRV GATATC 2 cut(s) 465, 873
EcoT14I CCWWGG 5 cut(s) 291, 490, 1018, 1216, 2419
EcoT38I GRGCYC 4 cut(s) 406, 1377, 1635, 1676
ErhI CCWWGG 5 cut(s) 291, 490, 1018, 1216, 2419
Esp3I CGTCTC 1 cut(s) 1786
FaeI CATG 4 cut(s) 11, 1367, 1441, 2384
FalI AAGNNNNNCTT 2 cut(s) 2268, 2300
FaqI GGGAC 2 cut(s) 492, 2278
FatI CATG 4 cut(s) 7, 1363, 1437, 2380
FauI CCCGC 1 cut(s) 419
FbaI TGATCA 2 cut(s) 2173, 2239
FblI GTMKAC 1 cut(s) 1816
Fnu4HI GCNGC 5 cut(s) 501, 532, 880, 1582, 2025
FokI GGATG 5 cut(s) 80, 218, 308, 725, 1234
FriOI GRGCYC 4 cut(s) 406, 1377, 1635, 1676
Fsp4HI GCNGC 5 cut(s) 501, 532, 880, 1582, 2025
FspBI CTAG 5 cut(s) 752, 1283, 1346, 2123, 2460
GluI GCNGC 5 cut(s) 501, 532, 880, 1582, 2025
GsaI CCCAGC 1 cut(s) 1763
GsuI CTGGAG 1 cut(s) 2452
HaeIII GGCC 6 cut(s) 393, 495, 1043, 1674, 2338, 2418
Hin1II CATG 4 cut(s) 11, 1367, 1441, 2384
HindIII AAGCTT 2 cut(s) 1687, 2006
Hpy166II GTNNAC 4 cut(s) 677, 1817, 2452, 2495
Hpy8I GTNNAC 4 cut(s) 677, 1817, 2452, 2495
HpyAV CCTTC 5 cut(s) 31, 1401, 1445, 2134, 2508
HpyCH4IV ACGT 1 cut(s) 2097
HpyF10VI GCNNNNNNNGC 3 cut(s) 1012, 1913, 2024
HpySE526I ACGT 1 cut(s) 2097
Hsp92II CATG 4 cut(s) 11, 1367, 1441, 2384
Ksp22I TGATCA 2 cut(s) 2173, 2239
LguI GCTCTTC 1 cut(s) 2310
LmnI GCTCC 7 cut(s) 847, 1020, 1266, 1343, 1380, 2124, 2423
Lsp1109I GCAGC 5 cut(s) 512, 543, 891, 1593, 2011
LweI GCATC 1 cut(s) 747
MabI ACCWGGT 1 cut(s) 83
MaeI CTAG 5 cut(s) 752, 1283, 1346, 2123, 2460
MaeII ACGT 1 cut(s) 2097
MaeIII GTNAC 8 cut(s) 227, 611, 1187, 1879, 2093, 2182, 2353, 2428
MboII GAAGA 9 cut(s) 406, 714, 730, 788, 845, 1838, 1979, 2297, 2402
MfeI CAATTG 2 cut(s) 171, 2232
MflI RGATCY 5 cut(s) 202, 1069, 1720, 1765, 1843
MhlI GDGCHC 5 cut(s) 406, 1377, 1635, 1676, 2121
MlsI TGGCCA 1 cut(s) 1043
MluNI TGGCCA 1 cut(s) 1043
MlyI GAGTC 1 cut(s) 1938
MmeI TCCRAC 3 cut(s) 1199, 1551, 2060
Mox20I TGGCCA 1 cut(s) 1043
MroXI GAANNNNTTC 3 cut(s) 325, 904, 2283
MscI TGGCCA 1 cut(s) 1043
MseI TTAA 8 cut(s) 111, 546, 729, 914, 1130, 1419, 2193, 2316
MslI CAYNNNNRTG 3 cut(s) 12, 1368, 2385
Msp20I TGGCCA 1 cut(s) 1043
MspA1I CMGCKG 1 cut(s) 962
MspCI CTTAAG 1 cut(s) 545
MspR9I CCNGG 5 cut(s) 85, 200, 672, 1003, 2470
MunI CAATTG 2 cut(s) 171, 2232
MvaI CCWGG 5 cut(s) 85, 200, 672, 1003, 2470
MwoI GCNNNNNNNGC 3 cut(s) 1012, 1913, 2024
NlaIII CATG 4 cut(s) 11, 1367, 1441, 2384
NlaIV GGNNCC 7 cut(s) 89, 813, 1262, 1528, 1674, 1675, 2145
NmeAIII GCCGAG 1 cut(s) 2394
NmuCI GTSAC 3 cut(s) 2093, 2182, 2428
PciSI GCTCTTC 1 cut(s) 2310
PdmI GAANNNNTTC 3 cut(s) 325, 904, 2283
PflMI CCANNNNNTGG 1 cut(s) 608
PkrI GCNGC 5 cut(s) 502, 533, 881, 1583, 2026
PleI GAGTC 1 cut(s) 1937
PpsI GAGTC 1 cut(s) 1937
PpuMI RGGWCCY 1 cut(s) 2128
Psp124BI GAGCTC 1 cut(s) 1377
Psp5II RGGWCCY 1 cut(s) 2128
Psp6I CCWGG 5 cut(s) 83, 198, 670, 1001, 2468
PspFI CCCAGC 1 cut(s) 1759
PspGI CCWGG 5 cut(s) 83, 198, 670, 1001, 2468
PspN4I GGNNCC 7 cut(s) 89, 813, 1262, 1528, 1674, 1675, 2145
PspOMI GGGCCC 1 cut(s) 1672
PspPI GGNCC 3 cut(s) 1672, 1673, 2128
PspPPI RGGWCCY 1 cut(s) 2128
PstI CTGCAG 4 cut(s) 267, 1269, 2029, 2449
PstNI CAGNNNCTG 2 cut(s) 1463, 1932
PsuI RGATCY 5 cut(s) 202, 1069, 1720, 1765, 1843
PvuII CAGCTG 1 cut(s) 962
RsaI GTAC 3 cut(s) 952, 1195, 1828
RsaNI GTAC 3 cut(s) 951, 1194, 1827
RseI CAYNNNNRTG 3 cut(s) 12, 1368, 2385
SacI GAGCTC 1 cut(s) 1377
SapI GCTCTTC 1 cut(s) 2310
SaqAI TTAA 8 cut(s) 111, 546, 729, 914, 1130, 1419, 2193, 2316
SatI GCNGC 5 cut(s) 501, 532, 880, 1582, 2025
Sau96I GGNCC 3 cut(s) 1672, 1673, 2128
ScaI AGTACT 1 cut(s) 1828
SchI GAGTC 1 cut(s) 1938
ScrFI CCNGG 5 cut(s) 85, 200, 672, 1003, 2470
SduI GDGCHC 5 cut(s) 406, 1377, 1635, 1676, 2121
SexAI ACCWGGT 1 cut(s) 83
SfaNI GCATC 1 cut(s) 747
SfcI CTRYAG 6 cut(s) 263, 504, 1265, 1552, 2025, 2445
SinI GGWCC 1 cut(s) 2128
SmiMI CAYNNNNRTG 3 cut(s) 12, 1368, 2385
SmlI CTYRAG 2 cut(s) 545, 1121
SmoI CTYRAG 2 cut(s) 545, 1121
SsiI CCGC 3 cut(s) 426, 887, 1207
SspI AATATT 1 cut(s) 1183
SspMI CTAG 5 cut(s) 752, 1283, 1346, 2123, 2460
SstI GAGCTC 1 cut(s) 1377
StyD4I CCNGG 5 cut(s) 83, 198, 670, 1001, 2468
StyI CCWWGG 5 cut(s) 291, 490, 1018, 1216, 2419
TaiI ACGT 1 cut(s) 2100
TaqI TCGA 2 cut(s) 780, 1635
TatI WGTACW 1 cut(s) 1826
Tru1I TTAA 8 cut(s) 111, 546, 729, 914, 1130, 1419, 2193, 2316
Tru9I TTAA 8 cut(s) 111, 546, 729, 914, 1130, 1419, 2193, 2316
TscAI CASTG 5 cut(s) 157, 282, 1096, 1104, 1340
TseFI GTSAC 3 cut(s) 2093, 2182, 2428
TseI GCWGC 5 cut(s) 500, 531, 879, 1581, 2024
Tsp45I GTSAC 3 cut(s) 2093, 2182, 2428
TspDTI ATGAA 4 cut(s) 1454, 2360, 2397, 2403
TspGWI ACGGA 1 cut(s) 407
TspRI CASTG 5 cut(s) 157, 282, 1096, 1104, 1340
Van91I CCANNNNNTGG 1 cut(s) 608
Vha464I CTTAAG 1 cut(s) 545
VpaK11BI GGWCC 1 cut(s) 2128
XagI CCTNNNNNAGG 1 cut(s) 1326
XcmI CCANNNNNNNNNTGG 1 cut(s) 1409
XmiI GTMKAC 1 cut(s) 1816
XmnI GAANNNNTTC 3 cut(s) 325, 904, 2283
XspI CTAG 5 cut(s) 752, 1283, 1346, 2123, 2460
ZrmI AGTACT 1 cut(s) 1828
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.