Rh6DG211300
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0016498
Physical Location & Seq
Forward (+)
37678952 .. 37682406
3455 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG211300.1

Sequence Viewer

Length: 3273 bp
ATGTCAACTAATGCAATCACTATTATTCTCTTGTTTCTCAACATCTCTCTATTTCCTGCCATCTCTGCTCTGAACCAAGAGGGTCTCTCCCTGCTTTCATGGCTTTCAACCTTCAACTCTTCTTCCTCAGCTGCCCTTTTTTCTTCCTGGAATCCAACTGCCTATGATCCATGCAAATGGGATTATATCAGATGTTCTGAAGCAGGATTTGTTTCAGAAATCACAATAACCTCAATCAATATACAAACCAGGTTCCCCATCCAGCTACTCACCTTTAATCATCTCACCACCCTTGTAATCTCAAACGCCAACCTCAGTGGAGAAATTCCACAGGCAATTGGAAACTTGTCATCACTCATCATCCTGAATCTCAGCTTCAATGCTCTAAGAGGTTACATCCCACAGGAGATAGGAAAATTATCACAACTGCAGTTGTTATCACTGAATTCAAATTCCTTGGATGGTGCAATTCCGAAAGAAATTGGAAACTGTTCAGAGCTTCAACAACTTGAACTATACGATAACCAGCTATCTGGAAAGATTCCTGCTGAAATAGGCCAGTTGTGGGCTCTGGAAATCTTCCGTGCAGGCGGGAATCCTGACATTCAAGGTGAAATTCCAATGCAGATATCAAACTGCAAGGGACTAACTTTCCTTGGCCTTGCAGCTACAGGAATCACGGGGAAAATTCCAAGCAGCATAGGAGAACTTAAGAATCTCCAAACTCTTTCAATTTATACTGCAAATCTCTCAGGTGAGATTCCACCAGAAATTGGTAACTGTTCAGCCTTAGAAAATTTGTTTCTGTATGATAACCAGCTTGCTGGTCAAATTCCTGGTGAACTTGGTCTGTTGAAAAAACTCAGAAGAGTGCTACTGTGGAAGAACAATCTCAATGGAAGCATCCCAGACACACTAGGGAACTGTTCAAAATTGAAAGTAGTCGACTTCTCGTTGAATCTTCTGAGTGGTGAGGTTCCTTTGTCTCTTGCAAATTTGGTGGCATTGGAGGAGCTTCTTCTATCTGAGAATCAGATATCAGGCAGCATACCGCCTTTACTTGGAAACTTTTCCAGTTTAAAGCAACTGGAATTGGATAACAACAGATTTTCGGGTACAATTCCACCAGTCCTTGGGAAACTAAAAGAACTTACTCTTTTCTTTGCCTGGCAGAATCAGCTCCAAGGAAGCATACCAACTGAGCTGGCCAACTGTCAGAAACTTCAAGCATTGGATCTCTCACATAATCTCCTCAGTGGATCAGTGCCGAGTTCTCTGTTTGACCTCAAGAACTTAACACAAGTGTTGCTGATTTCAAATGAATTTTCAGGACAACTTCCAACCAATATTGGTAACTGTACCAACTTGATCCGCTTACGCCTCGGATCAAACAACTTCACAGGTCAGATACCATCCGGCATTCGGCTCCTGCAGAGATTAAGCTTCCTAGAATTGTCAGAAAATCATTTTACTGGGAAAATTCCTTCTGAAATAGGAGACTGCTCCCACCTAGAAATGGTTGACTTGCATGGAAATGAGCTCCGAGGCAGGATTCCTTCGTCTTTCCAATTCCTTACTGGTCTTAATGTTTTAGACCTGTCCATGAACCAAATAGAAGGCACAGTTCCTGAACATTTGGGGAAGCTGAAATCCTTGAACAAACTGGTGGTCAATGGAAACTACATTACTGGTTCCATTCCCAAGTCATTGAGCCTCTGTAGGGATTTGCAGTTGTTGGAACTGAGCAGCAACAGACTTACAGGCTCTATCCCAGACGAGATTGGACACTTGCAAGGGCTCGATATTCTCTTGAATCTGAGCTGGAATTCTCTGACGGGCCCCATTCCAGAAAGCTTCTCAAATCTCTCAAAACTTGCCACTATGGATCTCTCCCACAATATGCTGACAGGAAGCCTGAAAGTGCTGGGGGTTCTGGACAACCTCGTCTCCCTGAATGTCTCATATAATGACTTTTCAGGTCTACTTCCCAGTACTAATTTTTTCAAGGATCTTCCACCAACTGCATTTGCTGGTAATCACAAGTTATGCATCAACGGAAACAAGTGCCAACCAAATAGAAACCTGCATGACAAGAAATCCATCAGATATCTAATTATTTGTATCCTTCTCAGTGTAACTGCAACTATATTTCTTATGCTTGCTGGAATAGCTTTGTTTGTCAGAGTCTGGGGAATCACATTTGGGATGACGAACGGTAAAGAAGAAAATGATCTGGTGTGGGAATTCACCCCATTTCAAAAGCTTGATTTTGCGGTTAATGACATTGTGACTAAGCTATCAGACTCGAACATTGTTGGGAAGGGAGGCTCAGGAATGGTTTATCGTGTAGAGACTCCAACGAGACAGGTCATTGCAGTGAAGAAGTTATGGCCGATAAACAATGGGGAGCTTCCAGAAAGAGACCTTTTCTCTACAGAAGTTCATACTCTTGGATCGATAAGGCATAAGAATATAGTGAGGCTTCTGGGCTGTTGTAAAAATGGGAAAACCAGATTGCTTTTGTTTGATTACATCAGTAATGGGAGCTTAGCTGGATTGCTCCATGAGAAGAGGCTGTTCTTGGACTGGGATACAAGGTACAAGATTGTACTGGGAGCAGCTCATGGCCTAGCTTATCTTCATCATGATTGTGTTCCTCCAATCATTCATCGAGATATTAAGGCGAACAACATCTTGGTAGGGCCACAGTATGAATCTCTTCTTGCAGATTTTGGCCTTGCAAAGCTGTTGAGTTCTCCAGAATGCTACAAAGTTTCCAACACAGTTGCAGGTTCTTATGGGTACATTGCTCCAGAATATGGATACAGTTTGAGGATCACAGAAAAGAGTGACGTGTATAGCTATGGAGTGGTGCTCCTAGAGGTCCTAACAGGGAAGGAACCAACAGATAACAAGATTCCAGAGGGTGATCATATTGTCACTTGGGTTAATAAGGAACTTAGAGAGAGAAAAAGAGAATTCACATCAATTGTTGATCATCAGCTAATACTGAGATCAGGGACACAAATTCAAGAAATGCTTCAAGTTCTTGGGGTAGCTCTTCTCTGTGTTAATCCCTGCCCGGAGGAAAGGCCGACAATGAAAGATGTAACAGCAATGCTCAATGAGATCAAGCATGAAAATGAAGAATGTGAAAAACCAAATTTTCTTGGCCAAGGAGCTGTGACAAACAGGAAAACTGCAGTTTACAGTTCTAGTTTCTCCAAGTCATCTGAACCTCTAATTGGTTCACCTTCTTGTTTTCCCAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase

Protein Analysis

1090

Amino Acids

119.71

Weight (kDa)

6.05

Isoelectric Point (pI)

28.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 24 - 66 4.1e-07 Leucine rich repeat N-terminal domain
LRR_14 PF23598 92 - 194 7.8e-10 Leucine-rich repeat region
LRR_8 PF13855 94 - 153 3.8e-07 Leucine rich repeat
LRR_14 PF23598 205 - 313 4.9e-09 Leucine-rich repeat region
LRR_8 PF13855 287 - 346 8.2e-06 Leucine rich repeat
LRR_14 PF23598 475 - 556 1.2e-07 Leucine-rich repeat region
LRR_8 PF13855 502 - 562 4.2e-08 Leucine rich repeat
Pkinase PF00069 769 - 1038 2.6e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 770 - 1040 5.4e-39 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016498)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g14410
malus_domestica MD05G1018000.v1.1
prunus_persica Prupe.8G022000_v2.0.a1
pyrus_communis pycom05g01070
rosa_chinensis RchiOBHm_Chr6g0276741
rosa_laevigata RLG00000013367
rosa_multiflora Rmu_sc0004481.1_g000026
rosa_roxburghii Rroxscaffold_7G00192010
rosa_rugosa Rorug06G0103400
rosa_samantha Rh6AG213800 Rh6BG218600 Rh6CG221600 Rh6DG211300
rosa_wichuraiana Rw6G018690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1943
Acc36I ACCTGC 2 cut(s) 2091, 2780
AccB7I CCANNNNNTGG 3 cut(s) 773, 1133, 2819
AccI GTMKAC 2 cut(s) 945, 1981
AciI CCGC 4 cut(s) 591, 1052, 1372, 2273
AclWI GGATC 9 cut(s) 161, 1242, 1267, 1363, 1393, 1893, 2016, 2461, 2843
AcoI YGGCCR 3 cut(s) 1206, 2390, 3172
AcuI CTGAAG 1 cut(s) 219
AfaI GTAC 6 cut(s) 1117, 1360, 1993, 2600, 2610, 2804
AfiI CCNNNNNNNGG 9 cut(s) 565, 773, 1061, 1133, 1422, 1516, 1720, 2819, 3245
AflII CTTAAG 1 cut(s) 710
AflIII ACRYGT 1 cut(s) 2853
AjiI CACGTC 1 cut(s) 2854
AjnI CCWGG 4 cut(s) 146, 248, 835, 1166
AjuI GAANNNNNNNTTGG 4 cut(s) 2678, 2710, 3228, 3260
Alw21I GWGCWC 2 cut(s) 1542, 2877
Alw26I GTCTC 8 cut(s) 89, 990, 1491, 1951, 1963, 2345, 2356, 2415
AlwI GGATC 9 cut(s) 161, 1242, 1267, 1363, 1393, 1893, 2016, 2461, 2843
AlwNI CAGNNNCTG 2 cut(s) 1628, 2187
ApaI GGGCCC 1 cut(s) 1841
ApeKI GCWGC 6 cut(s) 131, 665, 696, 1044, 1746, 2618
ArsI GACNNNNNNTTYG 2 cut(s) 1653, 1685
Asp700I GAANNNNTTC 4 cut(s) 490, 1069, 2718, 3039
AspS9I GGNCC 4 cut(s) 1837, 1838, 2702, 2884
AsuC2I CCSGG 1 cut(s) 3083
AsuHPI GGTGA 9 cut(s) 262, 277, 623, 767, 851, 983, 2239, 2939, 3243
AvaII GGWCC 1 cut(s) 2884
BaeGI GKGCMC 1 cut(s) 1841
BalI TGGCCA 2 cut(s) 1208, 3174
BanII GRGCYC 4 cut(s) 571, 1542, 1800, 1841
Bbv12I GWGCWC 2 cut(s) 1542, 2877
BbvCI CCTCAGC 1 cut(s) 127
BbvI GCAGC 6 cut(s) 118, 677, 708, 1056, 1758, 2630
BccI CCATC 5 cut(s) 68, 266, 455, 1420, 2108
BciT130I CCWGG 4 cut(s) 148, 250, 837, 1168
BciVI GTATCC 3 cut(s) 2132, 2584, 2816
BclI TGATCA 2 cut(s) 2929, 2995
BcnI CCSGG 1 cut(s) 3083
BcoDI GTCTC 8 cut(s) 89, 990, 1491, 1951, 1963, 2345, 2356, 2415
BfaI CTAG 6 cut(s) 917, 1448, 1511, 2630, 2879, 3216
BfmI CTRYAG 6 cut(s) 428, 669, 1430, 1717, 2433, 3201
BfrI CTTAAG 1 cut(s) 710
BfuAI ACCTGC 2 cut(s) 2091, 2780
BfuI GTATCC 3 cut(s) 2132, 2584, 2816
BisI GCNGC 6 cut(s) 132, 666, 697, 1045, 1747, 2619
BlpI GCTNAGC 1 cut(s) 2548
BlsI GCNGC 6 cut(s) 133, 667, 698, 1046, 1748, 2620
BmcAI AGTACT 1 cut(s) 1993
Bme1390I CCNGG 5 cut(s) 148, 250, 837, 1168, 3083
Bme18I GGWCC 1 cut(s) 2884
BmgBI CACGTC 1 cut(s) 2854
BmgT120I GGNCC 4 cut(s) 1837, 1838, 2702, 2884
BmiI GGNNCC 7 cut(s) 254, 978, 1427, 1693, 1839, 1840, 2901
BmrFI CCNGG 5 cut(s) 148, 250, 837, 1168, 3083
BmrI ACTGGG 4 cut(s) 1482, 1983, 2596, 2621
BmsI GCATC 2 cut(s) 912, 2058
BmuI ACTGGG 4 cut(s) 1482, 1983, 2596, 2621
BplI GAGNNNNNCTC 4 cut(s) 71, 103, 2859, 2891
BpmI CTGGAG 2 cut(s) 2742, 2796
Bpu10I CCTNAGC 2 cut(s) 127, 2329
Bpu1102I GCTNAGC 1 cut(s) 2548
BpuEI CTTGAG 1 cut(s) 1271
BpuMI CCSGG 1 cut(s) 3083
Bsa29I ATCGAT 1 cut(s) 2456
BsaI GGTCTC 2 cut(s) 89, 2415
BsaJI CCNNGG 7 cut(s) 456, 655, 1132, 1183, 1381, 1543, 3175
BsaXI ACNNNNNCTCC 4 cut(s) 1233, 1263, 1931, 1961
Bsc4I CCNNNNNNNGG 9 cut(s) 565, 773, 1061, 1133, 1422, 1516, 1720, 2819, 3245
Bse3DI GCAATG 3 cut(s) 2370, 2805, 3123
BseBI CCWGG 4 cut(s) 148, 250, 837, 1168
BseCI ATCGAT 1 cut(s) 2456
BseDI CCNNGG 7 cut(s) 456, 655, 1132, 1183, 1381, 1543, 3175
BseGI GGATG 7 cut(s) 258, 360, 396, 466, 903, 1412, 2211
BseLI CCNNNNNNNGG 9 cut(s) 565, 773, 1061, 1133, 1422, 1516, 1720, 2819, 3245
BseMI GCAATG 3 cut(s) 2370, 2805, 3123
BseRI GAGGAG 2 cut(s) 1025, 1241
BseSI GKGCMC 1 cut(s) 1841
BseXI GCAGC 6 cut(s) 118, 677, 708, 1056, 1758, 2630
BseYI CCCAGC 1 cut(s) 1924
BsgI GTGCAG 1 cut(s) 606
BshVI ATCGAT 1 cut(s) 2456
BsiHKAI GWGCWC 2 cut(s) 1542, 2877
BsiSI CCGG 2 cut(s) 1416, 3083
BslFI GGGAC 2 cut(s) 657, 3034
BslI CCNNNNNNNGG 9 cut(s) 565, 773, 1061, 1133, 1422, 1516, 1720, 2819, 3245
BsmAI GTCTC 8 cut(s) 89, 990, 1491, 1951, 1963, 2345, 2356, 2415
BsmBI CGTCTC 1 cut(s) 1951
BsmFI GGGAC 2 cut(s) 657, 3034
BsmI GAATGC 2 cut(s) 1419, 2768
Bso31I GGTCTC 2 cut(s) 89, 2415
Bsp120I GGGCCC 1 cut(s) 1837
Bsp1286I GDGCHC 5 cut(s) 571, 1542, 1800, 1841, 2877
Bsp1720I GCTNAGC 1 cut(s) 2548
BspACI CCGC 4 cut(s) 591, 1052, 1372, 2273
BspDI ATCGAT 1 cut(s) 2456
BspHI TCATGA 1 cut(s) 2644
BspLI GGNNCC 7 cut(s) 254, 978, 1427, 1693, 1839, 1840, 2901
BspMAI CTGCAG 3 cut(s) 432, 1434, 3205
BspMI ACCTGC 2 cut(s) 2091, 2780
BspPI GGATC 9 cut(s) 161, 1242, 1267, 1363, 1393, 1893, 2016, 2461, 2843
BspQI GCTCTTC 1 cut(s) 3066
BspTI CTTAAG 1 cut(s) 710
BspTNI GGTCTC 2 cut(s) 89, 2415
BsrDI GCAATG 3 cut(s) 2370, 2805, 3123
BssECI CCNNGG 7 cut(s) 456, 655, 1132, 1183, 1381, 1543, 3175
BssT1I CCWWGG 5 cut(s) 456, 655, 1132, 1183, 3175
Bst2UI CCWGG 4 cut(s) 148, 250, 837, 1168
Bst6I CTCTTC 5 cut(s) 124, 862, 2564, 2724, 3066
BstAFI CTTAAG 1 cut(s) 710
BstC8I GCNNGC 4 cut(s) 589, 822, 1206, 2160
BstF5I GGATG 7 cut(s) 258, 360, 396, 466, 903, 1412, 2211
BstMAI GTCTC 8 cut(s) 89, 990, 1491, 1951, 1963, 2345, 2356, 2415
BstMWI GCNNNNNNNGC 4 cut(s) 65, 100, 1177, 2168
BstNI CCWGG 4 cut(s) 148, 250, 837, 1168
BstSCI CCNGG 5 cut(s) 146, 248, 835, 1166, 3081
BstSFI CTRYAG 6 cut(s) 428, 669, 1430, 1717, 2433, 3201
BstSLI GKGCMC 1 cut(s) 1841
BstV1I GCAGC 6 cut(s) 118, 677, 708, 1056, 1758, 2630
BstX2I RGATCY 3 cut(s) 1234, 1885, 2008
BstXI CCANNNNNNTGG 3 cut(s) 177, 533, 824
BstYI RGATCY 3 cut(s) 1234, 1885, 2008
Bsu15I ATCGAT 1 cut(s) 2456
BsuI GTATCC 3 cut(s) 2132, 2584, 2816
BsuTUI ATCGAT 1 cut(s) 2456
BtrI CACGTC 1 cut(s) 2854
BtsCI GGATG 7 cut(s) 258, 360, 396, 466, 903, 1412, 2211
BtsI GCAGTG 1 cut(s) 2382
BtsIMutI CAGTG 6 cut(s) 322, 440, 1261, 1269, 2137, 2382
BveI ACCTGC 2 cut(s) 2091, 2780
Cac8I GCNNGC 4 cut(s) 589, 822, 1206, 2160
CaiI CAGNNNCTG 2 cut(s) 1628, 2187
CciI TCATGA 1 cut(s) 2644
Cfr13I GGNCC 4 cut(s) 1837, 1838, 2702, 2884
ClaI ATCGAT 1 cut(s) 2456
CsiI ACCWGGT 1 cut(s) 248
Csp6I GTAC 6 cut(s) 1116, 1359, 1992, 2599, 2609, 2803
CspCI CAANNNNNGTGG 4 cut(s) 298, 333, 981, 1016
CviAII CATG 9 cut(s) 99, 171, 1529, 1603, 2087, 2564, 2624, 2645, 3137
CviQI GTAC 6 cut(s) 1116, 1359, 1992, 2599, 2609, 2803
DraI TTTAAA 1 cut(s) 1080
DrdI GACNNNNNNGTC 1 cut(s) 1943
DseDI GACNNNNNNGTC 1 cut(s) 1943
EaeI YGGCCR 3 cut(s) 1206, 2390, 3172
Eam1104I CTCTTC 5 cut(s) 124, 862, 2564, 2724, 3066
EarI CTCTTC 5 cut(s) 124, 862, 2564, 2724, 3066
Ecl136II GAGCTC 1 cut(s) 1540
Eco130I CCWWGG 5 cut(s) 456, 655, 1132, 1183, 3175
Eco24I GRGCYC 4 cut(s) 571, 1542, 1800, 1841
Eco31I GGTCTC 2 cut(s) 89, 2415
Eco32I GATATC 3 cut(s) 630, 1038, 2108
Eco47I GGWCC 1 cut(s) 2884
Eco53kI GAGCTC 1 cut(s) 1540
Eco57I CTGAAG 1 cut(s) 219
EcoICRI GAGCTC 1 cut(s) 1540
EcoO109I RGGNCCY 2 cut(s) 1838, 2884
EcoRI GAATTC 4 cut(s) 445, 1825, 2243, 2978
EcoRII CCWGG 4 cut(s) 146, 248, 835, 1166
EcoRV GATATC 3 cut(s) 630, 1038, 2108
EcoT14I CCWWGG 5 cut(s) 456, 655, 1132, 1183, 3175
EcoT22I ATGCAT 1 cut(s) 2051
EcoT38I GRGCYC 4 cut(s) 571, 1542, 1800, 1841
ErhI CCWWGG 5 cut(s) 456, 655, 1132, 1183, 3175
Esp3I CGTCTC 1 cut(s) 1951
FaeI CATG 9 cut(s) 102, 174, 1532, 1606, 2090, 2567, 2627, 2648, 3140
FalI AAGNNNNNCTT 2 cut(s) 3024, 3056
FaqI GGGAC 2 cut(s) 657, 3034
FatI CATG 9 cut(s) 98, 170, 1528, 1602, 2086, 2563, 2623, 2644, 3136
FauI CCCGC 1 cut(s) 584
FbaI TGATCA 2 cut(s) 2929, 2995
FblI GTMKAC 2 cut(s) 945, 1981
Fnu4HI GCNGC 6 cut(s) 132, 666, 697, 1045, 1747, 2619
FokI GGATG 7 cut(s) 245, 347, 383, 473, 890, 1399, 2218
FriOI GRGCYC 4 cut(s) 571, 1542, 1800, 1841
Fsp4HI GCNGC 6 cut(s) 132, 666, 697, 1045, 1747, 2619
FspBI CTAG 6 cut(s) 917, 1448, 1511, 2630, 2879, 3216
GluI GCNGC 6 cut(s) 132, 666, 697, 1045, 1747, 2619
GsaI CCCAGC 1 cut(s) 1928
GsuI CTGGAG 2 cut(s) 2742, 2796
HapII CCGG 2 cut(s) 1416, 3083
Hin1II CATG 9 cut(s) 102, 174, 1532, 1606, 2090, 2567, 2627, 2648, 3140
HincII GTYRAC 3 cut(s) 6, 946, 1522
HindII GTYRAC 3 cut(s) 6, 946, 1522
HindIII AAGCTT 3 cut(s) 1441, 1852, 2261
HpaII CCGG 2 cut(s) 1416, 3083
HphI GGTGA 9 cut(s) 262, 277, 623, 767, 851, 983, 2239, 2939, 3243
Hpy166II GTNNAC 7 cut(s) 6, 842, 946, 1522, 1982, 3208, 3251
Hpy8I GTNNAC 7 cut(s) 6, 842, 946, 1522, 1982, 3208, 3251
HpyAV CCTTC 8 cut(s) 121, 1494, 1566, 1610, 2135, 2314, 2890, 3264
HpyCH4IV ACGT 1 cut(s) 2853
HpyF10VI GCNNNNNNNGC 4 cut(s) 65, 100, 1177, 2168
HpySE526I ACGT 1 cut(s) 2853
Hsp92II CATG 9 cut(s) 102, 174, 1532, 1606, 2090, 2567, 2627, 2648, 3140
Ksp22I TGATCA 2 cut(s) 2929, 2995
LguI GCTCTTC 1 cut(s) 3066
Lsp1109I GCAGC 6 cut(s) 118, 677, 708, 1056, 1758, 2630
LweI GCATC 2 cut(s) 912, 2058
MabI ACCWGGT 1 cut(s) 248
MaeI CTAG 6 cut(s) 917, 1448, 1511, 2630, 2879, 3216
MaeII ACGT 1 cut(s) 2853
MaeIII GTNAC 9 cut(s) 392, 776, 1352, 2134, 2287, 2849, 2938, 3109, 3184
MfeI CAATTG 2 cut(s) 336, 2988
MflI RGATCY 3 cut(s) 1234, 1885, 2008
MhlI GDGCHC 5 cut(s) 571, 1542, 1800, 1841, 2877
MlsI TGGCCA 2 cut(s) 1208, 3174
MluNI TGGCCA 2 cut(s) 1208, 3174
MlyI GAGTC 3 cut(s) 2193, 2297, 2347
MmeI TCCRAC 5 cut(s) 179, 1364, 1716, 2381, 2802
Mox20I TGGCCA 2 cut(s) 1208, 3174
Mph1103I ATGCAT 1 cut(s) 2051
MroXI GAANNNNTTC 4 cut(s) 490, 1069, 2718, 3039
MscI TGGCCA 2 cut(s) 1208, 3174
MslI CAYNNNNRTG 5 cut(s) 175, 1533, 2375, 2649, 3141
Msp20I TGGCCA 2 cut(s) 1208, 3174
MspA1I CMGCKG 1 cut(s) 131
MspCI CTTAAG 1 cut(s) 710
MspI CCGG 2 cut(s) 1416, 3083
MspR9I CCNGG 5 cut(s) 148, 250, 837, 1168, 3083
MunI CAATTG 2 cut(s) 336, 2988
Mva1269I GAATGC 2 cut(s) 1419, 2768
MvaI CCWGG 4 cut(s) 148, 250, 837, 1168
MwoI GCNNNNNNNGC 4 cut(s) 65, 100, 1177, 2168
NciI CCSGG 1 cut(s) 3083
NlaIII CATG 9 cut(s) 102, 174, 1532, 1606, 2090, 2567, 2627, 2648, 3140
NlaIV GGNNCC 7 cut(s) 254, 978, 1427, 1693, 1839, 1840, 2901
NmeAIII GCCGAG 1 cut(s) 1293
NmuCI GTSAC 4 cut(s) 2287, 2849, 2938, 3184
NsiI ATGCAT 1 cut(s) 2051
PagI TCATGA 1 cut(s) 2644
PciSI GCTCTTC 1 cut(s) 3066
PctI GAATGC 2 cut(s) 1419, 2768
PdmI GAANNNNTTC 4 cut(s) 490, 1069, 2718, 3039
PflMI CCANNNNNTGG 3 cut(s) 773, 1133, 2819
PfoI TCCNGGA 1 cut(s) 146
PkrI GCNGC 6 cut(s) 133, 667, 698, 1046, 1748, 2620
PleI GAGTC 3 cut(s) 2192, 2297, 2347
PpsI GAGTC 3 cut(s) 2192, 2297, 2347
PpuMI RGGWCCY 1 cut(s) 2884
Psp124BI GAGCTC 1 cut(s) 1542
Psp5II RGGWCCY 1 cut(s) 2884
Psp6I CCWGG 4 cut(s) 146, 248, 835, 1166
PspFI CCCAGC 1 cut(s) 1924
PspGI CCWGG 4 cut(s) 146, 248, 835, 1166
PspN4I GGNNCC 7 cut(s) 254, 978, 1427, 1693, 1839, 1840, 2901
PspOMI GGGCCC 1 cut(s) 1837
PspPI GGNCC 4 cut(s) 1837, 1838, 2702, 2884
PspPPI RGGWCCY 1 cut(s) 2884
PstI CTGCAG 3 cut(s) 432, 1434, 3205
PstNI CAGNNNCTG 2 cut(s) 1628, 2187
PsuI RGATCY 3 cut(s) 1234, 1885, 2008
PvuII CAGCTG 1 cut(s) 131
RsaI GTAC 6 cut(s) 1117, 1360, 1993, 2600, 2610, 2804
RsaNI GTAC 6 cut(s) 1116, 1359, 1992, 2599, 2609, 2803
RseI CAYNNNNRTG 5 cut(s) 175, 1533, 2375, 2649, 3141
SacI GAGCTC 1 cut(s) 1542
SalI GTCGAC 1 cut(s) 944
SapI GCTCTTC 1 cut(s) 3066
SatI GCNGC 6 cut(s) 132, 666, 697, 1045, 1747, 2619
Sau96I GGNCC 4 cut(s) 1837, 1838, 2702, 2884
ScaI AGTACT 1 cut(s) 1993
SchI GAGTC 3 cut(s) 2193, 2297, 2347
ScrFI CCNGG 5 cut(s) 148, 250, 837, 1168, 3083
SduI GDGCHC 5 cut(s) 571, 1542, 1800, 1841, 2877
SexAI ACCWGGT 1 cut(s) 248
SfaNI GCATC 2 cut(s) 912, 2058
SfcI CTRYAG 6 cut(s) 428, 669, 1430, 1717, 2433, 3201
SinI GGWCC 1 cut(s) 2884
SmiMI CAYNNNNRTG 5 cut(s) 175, 1533, 2375, 2649, 3141
SmlI CTYRAG 2 cut(s) 710, 1286
SmoI CTYRAG 2 cut(s) 710, 1286
SsiI CCGC 4 cut(s) 591, 1052, 1372, 2273
SspI AATATT 1 cut(s) 1348
SspMI CTAG 6 cut(s) 917, 1448, 1511, 2630, 2879, 3216
SstI GAGCTC 1 cut(s) 1542
StyD4I CCNGG 5 cut(s) 146, 248, 835, 1166, 3081
StyI CCWWGG 5 cut(s) 456, 655, 1132, 1183, 3175
TaiI ACGT 1 cut(s) 2856
TaqI TCGA 5 cut(s) 945, 1800, 2306, 2456, 2671
TatI WGTACW 2 cut(s) 1991, 2608
TscAI CASTG 6 cut(s) 322, 447, 1261, 1269, 2137, 2382
TseFI GTSAC 4 cut(s) 2287, 2849, 2938, 3184
TseI GCWGC 6 cut(s) 131, 665, 696, 1044, 1746, 2618
Tsp45I GTSAC 4 cut(s) 2287, 2849, 2938, 3184
TspGWI ACGGA 2 cut(s) 572, 2070
TspRI CASTG 6 cut(s) 322, 447, 1261, 1269, 2137, 2382
Van91I CCANNNNNTGG 3 cut(s) 773, 1133, 2819
Vha464I CTTAAG 1 cut(s) 710
VpaK11BI GGWCC 1 cut(s) 2884
XcmI CCANNNNNNNNNTGG 1 cut(s) 1574
XmiI GTMKAC 2 cut(s) 945, 1981
XmnI GAANNNNTTC 4 cut(s) 490, 1069, 2718, 3039
XspI CTAG 6 cut(s) 917, 1448, 1511, 2630, 2879, 3216
ZrmI AGTACT 1 cut(s) 1993
Zsp2I ATGCAT 1 cut(s) 2051
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.