ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g31112 |
| rosa_laevigata | RLG00000001955 |
| rosa_multiflora | Rmu_co8033230.1_g000001 Rmu_sc0000546.1_g000064 Rmu_sc0002934.1_g000041 Rmu_sc0003382.1_g000025 Rmu_sc0004016.1_g000012 |
| rosa_roxburghii | Rroxscaffold_7G00211220 |
| rosa_samantha | Rh1DG293200 Rh6CG471400 Rh7DG334400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 274 |
| AfaI | GTAC | 3 cut(s) | 49, 157, 208 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 64 |
| AgsI | TTSAA | 1 cut(s) | 82 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 118, 150 |
| AluBI | AGCT | 1 cut(s) | 107 |
| AluI | AGCT | 1 cut(s) | 107 |
| BanII | GRGCYC | 1 cut(s) | 100 |
| BccI | CCATC | 1 cut(s) | 58 |
| BciVI | GTATCC | 1 cut(s) | 181 |
| BfaI | CTAG | 2 cut(s) | 195, 277 |
| BfuI | GTATCC | 1 cut(s) | 181 |
| BmsI | GCATC | 1 cut(s) | 129 |
| BsaJI | CCNNGG | 1 cut(s) | 59 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 64 |
| Bse1I | ACTGG | 1 cut(s) | 14 |
| BseDI | CCNNGG | 1 cut(s) | 59 |
| BseGI | GGATG | 2 cut(s) | 69, 120 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 64 |
| BseNI | ACTGG | 1 cut(s) | 14 |
| BsiSI | CCGG | 1 cut(s) | 40 |
| BslFI | GGGAC | 1 cut(s) | 41 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 64 |
| BsmFI | GGGAC | 1 cut(s) | 41 |
| Bsp1286I | GDGCHC | 1 cut(s) | 100 |
| Bsp1407I | TGTACA | 1 cut(s) | 206 |
| Bsp143I | GATC | 1 cut(s) | 253 |
| BspACI | CCGC | 1 cut(s) | 274 |
| BspHI | TCATGA | 1 cut(s) | 100 |
| BsrGI | TGTACA | 1 cut(s) | 206 |
| BsrI | ACTGG | 1 cut(s) | 14 |
| BssECI | CCNNGG | 1 cut(s) | 59 |
| BssMI | GATC | 1 cut(s) | 253 |
| BssT1I | CCWWGG | 1 cut(s) | 59 |
| Bst4CI | ACNGT | 1 cut(s) | 55 |
| BstAUI | TGTACA | 1 cut(s) | 206 |
| BstDEI | CTNAG | 1 cut(s) | 91 |
| BstF5I | GGATG | 2 cut(s) | 69, 120 |
| BstKTI | GATC | 1 cut(s) | 256 |
| BstMBI | GATC | 1 cut(s) | 253 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 104 |
| BsuI | GTATCC | 1 cut(s) | 181 |
| BtsCI | GGATG | 2 cut(s) | 69, 120 |
| BtsIMutI | CAGTG | 2 cut(s) | 7, 51 |
| CciI | TCATGA | 1 cut(s) | 100 |
| Csp6I | GTAC | 3 cut(s) | 48, 156, 207 |
| CviAII | CATG | 2 cut(s) | 101, 210 |
| CviJI | RGCY | 2 cut(s) | 98, 107 |
| CviKI_1 | RGCY | 2 cut(s) | 98, 107 |
| CviQI | GTAC | 3 cut(s) | 48, 156, 207 |
| DdeI | CTNAG | 1 cut(s) | 91 |
| DpnI | GATC | 1 cut(s) | 255 |
| DpnII | GATC | 1 cut(s) | 253 |
| Eco130I | CCWWGG | 1 cut(s) | 59 |
| Eco24I | GRGCYC | 1 cut(s) | 100 |
| EcoT14I | CCWWGG | 1 cut(s) | 59 |
| EcoT38I | GRGCYC | 1 cut(s) | 100 |
| ErhI | CCWWGG | 1 cut(s) | 59 |
| FaeI | CATG | 2 cut(s) | 104, 213 |
| FaiI | YATR | 4 cut(s) | 102, 110, 211, 265 |
| FaqI | GGGAC | 1 cut(s) | 41 |
| FatI | CATG | 2 cut(s) | 100, 209 |
| FokI | GGATG | 2 cut(s) | 76, 107 |
| FriOI | GRGCYC | 1 cut(s) | 100 |
| FspBI | CTAG | 2 cut(s) | 195, 277 |
| HapII | CCGG | 1 cut(s) | 40 |
| Hin1II | CATG | 2 cut(s) | 104, 213 |
| HincII | GTYRAC | 2 cut(s) | 33, 230 |
| HindII | GTYRAC | 2 cut(s) | 33, 230 |
| HpaI | GTTAAC | 1 cut(s) | 33 |
| HpaII | CCGG | 1 cut(s) | 40 |
| Hpy166II | GTNNAC | 2 cut(s) | 33, 230 |
| Hpy188III | TCNNGA | 1 cut(s) | 101 |
| Hpy8I | GTNNAC | 2 cut(s) | 33, 230 |
| Hpy99I | CGWCG | 1 cut(s) | 249 |
| HpyCH4III | ACNGT | 1 cut(s) | 55 |
| HpyCH4IV | ACGT | 1 cut(s) | 14 |
| HpyCH4V | TGCA | 2 cut(s) | 86, 171 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 104 |
| HpyF3I | CTNAG | 1 cut(s) | 91 |
| HpySE526I | ACGT | 1 cut(s) | 14 |
| Hsp92II | CATG | 2 cut(s) | 104, 213 |
| KspAI | GTTAAC | 1 cut(s) | 33 |
| Kzo9I | GATC | 1 cut(s) | 253 |
| LmnI | GCTCC | 1 cut(s) | 241 |
| LpnPI | CCDG | 1 cut(s) | 53 |
| LweI | GCATC | 1 cut(s) | 129 |
| MaeI | CTAG | 2 cut(s) | 195, 277 |
| MaeII | ACGT | 1 cut(s) | 14 |
| MalI | GATC | 1 cut(s) | 255 |
| MboI | GATC | 1 cut(s) | 253 |
| MboII | GAAGA | 1 cut(s) | 126 |
| MhlI | GDGCHC | 1 cut(s) | 100 |
| MluCI | AATT | 1 cut(s) | 26 |
| MnlI | CCTC | 2 cut(s) | 107, 136 |
| MseI | TTAA | 1 cut(s) | 32 |
| MspI | CCGG | 1 cut(s) | 40 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 104 |
| NdeII | GATC | 1 cut(s) | 253 |
| NlaIII | CATG | 2 cut(s) | 104, 213 |
| PagI | TCATGA | 1 cut(s) | 100 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 253 |
| RsaI | GTAC | 3 cut(s) | 49, 157, 208 |
| RsaNI | GTAC | 3 cut(s) | 48, 156, 207 |
| SaqAI | TTAA | 1 cut(s) | 32 |
| Sau3AI | GATC | 1 cut(s) | 253 |
| SduI | GDGCHC | 1 cut(s) | 100 |
| SetI | ASST | 3 cut(s) | 17, 109, 223 |
| SfaNI | GCATC | 1 cut(s) | 129 |
| SgeI | CNNG | 9 cut(s) | 22, 52, 72, 113, 150, 196, 207, 222, 263 |
| Sse9I | AATT | 1 cut(s) | 26 |
| SsiI | CCGC | 1 cut(s) | 274 |
| SspMI | CTAG | 2 cut(s) | 195, 277 |
| StyI | CCWWGG | 1 cut(s) | 59 |
| TaaI | ACNGT | 1 cut(s) | 55 |
| TaiI | ACGT | 1 cut(s) | 17 |
| TasI | AATT | 1 cut(s) | 26 |
| TatI | WGTACW | 1 cut(s) | 206 |
| Tru1I | TTAA | 1 cut(s) | 32 |
| Tru9I | TTAA | 1 cut(s) | 32 |
| TscAI | CASTG | 2 cut(s) | 14, 58 |
| TspDTI | ATGAA | 1 cut(s) | 117 |
| TspRI | CASTG | 2 cut(s) | 14, 58 |
| XspI | CTAG | 2 cut(s) | 195, 277 |