zinc metallopeptidase EGY3, chloroplastic
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G17870 |
| fragaria_vesca | FvH4_2g03320 |
| malus_domestica | MD10G1110200.v1.1 |
| prunus_persica | Prupe.8G150400_v2.0.a1 |
| pyrus_communis | pycom10g09570 |
| rosa_chinensis | RchiOBHm_Chr6g0248441 |
| rosa_laevigata | RLG00000015153 |
| rosa_roxburghii | Rroxscaffold_7G00213280 |
| rosa_rugosa | Rorug05G0531100 Rorug05G0531200 |
| rosa_samantha | Rh6AG047000 Rh6BG043600 Rh6CG040300 Rh6DG036800 |
| rosa_wichuraiana | Rw6G004100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 446 |
| Acc36I | ACCTGC | 1 cut(s) | 1552 |
| AccB1I | GGYRCC | 1 cut(s) | 869 |
| AccI | GTMKAC | 1 cut(s) | 767 |
| AciI | CCGC | 4 cut(s) | 659, 1393, 1530, 1638 |
| AclWI | GGATC | 2 cut(s) | 399, 1307 |
| AcsI | RAATTY | 2 cut(s) | 146, 601 |
| AcuI | CTGAAG | 5 cut(s) | 162, 510, 675, 895, 1663 |
| AfaI | GTAC | 1 cut(s) | 1542 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 424, 425, 1495, 1637 |
| AgsI | TTSAA | 6 cut(s) | 129, 316, 344, 502, 526, 620 |
| AjnI | CCWGG | 1 cut(s) | 865 |
| Alw21I | GWGCWC | 1 cut(s) | 782 |
| Alw26I | GTCTC | 2 cut(s) | 51, 488 |
| AlwI | GGATC | 2 cut(s) | 399, 1307 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1139 |
| AoxI | GGCC | 3 cut(s) | 1193, 1471, 1603 |
| ApeKI | GCWGC | 5 cut(s) | 280, 347, 965, 1139, 1158 |
| ApoI | RAATTY | 2 cut(s) | 146, 601 |
| AspS9I | GGNCC | 4 cut(s) | 87, 1194, 1247, 1670 |
| AsuHPI | GGTGA | 5 cut(s) | 15, 257, 266, 1184, 1360 |
| AvaII | GGWCC | 3 cut(s) | 87, 1247, 1670 |
| AxyI | CCTNAGG | 1 cut(s) | 1567 |
| BanI | GGYRCC | 1 cut(s) | 869 |
| BanII | GRGCYC | 1 cut(s) | 432 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1411, 1443 |
| BbsI | GAAGAC | 2 cut(s) | 305, 1384 |
| Bbv12I | GWGCWC | 1 cut(s) | 782 |
| BbvI | GCAGC | 5 cut(s) | 292, 334, 977, 1126, 1170 |
| BccI | CCATC | 5 cut(s) | 23, 575, 1000, 1015, 1148 |
| BceAI | ACGGC | 1 cut(s) | 1440 |
| BciT130I | CCWGG | 1 cut(s) | 867 |
| BcoDI | GTCTC | 2 cut(s) | 51, 488 |
| BfaI | CTAG | 5 cut(s) | 462, 890, 954, 1104, 1337 |
| BfuAI | ACCTGC | 1 cut(s) | 1552 |
| BglII | AGATCT | 2 cut(s) | 751, 1687 |
| BisI | GCNGC | 6 cut(s) | 281, 348, 660, 966, 1140, 1159 |
| BlpI | GCTNAGC | 1 cut(s) | 776 |
| BlsI | GCNGC | 6 cut(s) | 282, 349, 661, 967, 1141, 1160 |
| Bme1390I | CCNGG | 1 cut(s) | 867 |
| Bme18I | GGWCC | 3 cut(s) | 87, 1247, 1670 |
| BmgT120I | GGNCC | 4 cut(s) | 87, 1194, 1247, 1670 |
| BmiI | GGNNCC | 5 cut(s) | 89, 332, 431, 871, 1196 |
| BmrFI | CCNGG | 1 cut(s) | 867 |
| BmrI | ACTGGG | 1 cut(s) | 1192 |
| BmuI | ACTGGG | 1 cut(s) | 1192 |
| BpiI | GAAGAC | 2 cut(s) | 305, 1384 |
| BpmI | CTGGAG | 1 cut(s) | 1636 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 776 |
| BpuEI | CTTGAG | 1 cut(s) | 371 |
| BsaI | GGTCTC | 2 cut(s) | 51, 488 |
| BsaJI | CCNNGG | 2 cut(s) | 785, 1525 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 97, 127, 1293, 1323, 1524, 1554 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 424, 425, 1495, 1637 |
| Bse1I | ACTGG | 2 cut(s) | 1088, 1198 |
| Bse21I | CCTNAGG | 1 cut(s) | 1567 |
| BseBI | CCWGG | 1 cut(s) | 867 |
| BseDI | CCNNGG | 2 cut(s) | 785, 1525 |
| BseGI | GGATG | 2 cut(s) | 268, 1007 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 424, 425, 1495, 1637 |
| BseMII | CTCAG | 4 cut(s) | 767, 933, 1000, 1466 |
| BseNI | ACTGG | 2 cut(s) | 1088, 1198 |
| BseRI | GAGGAG | 2 cut(s) | 281, 323 |
| BseXI | GCAGC | 5 cut(s) | 292, 334, 977, 1126, 1170 |
| BsgI | GTGCAG | 2 cut(s) | 252, 822 |
| BshFI | GGCC | 3 cut(s) | 1195, 1473, 1605 |
| BshNI | GGYRCC | 1 cut(s) | 869 |
| BsiHKAI | GWGCWC | 1 cut(s) | 782 |
| BslFI | GGGAC | 1 cut(s) | 844 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 424, 425, 1495, 1637 |
| BsmAI | GTCTC | 2 cut(s) | 51, 488 |
| BsmFI | GGGAC | 1 cut(s) | 844 |
| BsnI | GGCC | 3 cut(s) | 1195, 1473, 1605 |
| Bso31I | GGTCTC | 2 cut(s) | 51, 488 |
| Bsp1286I | GDGCHC | 2 cut(s) | 432, 782 |
| Bsp143I | GATC | 6 cut(s) | 391, 751, 1261, 1312, 1557, 1687 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 776 |
| BspACI | CCGC | 4 cut(s) | 659, 1393, 1530, 1638 |
| BspANI | GGCC | 3 cut(s) | 1195, 1473, 1605 |
| BspCNI | CTCAG | 4 cut(s) | 768, 934, 999, 1467 |
| BspLI | GGNNCC | 5 cut(s) | 89, 332, 431, 871, 1196 |
| BspMI | ACCTGC | 1 cut(s) | 1552 |
| BspPI | GGATC | 2 cut(s) | 399, 1307 |
| BspT107I | GGYRCC | 1 cut(s) | 869 |
| BspTNI | GGTCTC | 2 cut(s) | 51, 488 |
| BsrI | ACTGG | 2 cut(s) | 1088, 1198 |
| BssECI | CCNNGG | 2 cut(s) | 785, 1525 |
| BssMI | GATC | 6 cut(s) | 391, 751, 1261, 1312, 1557, 1687 |
| BssT1I | CCWWGG | 1 cut(s) | 785 |
| Bst2UI | CCWGG | 1 cut(s) | 867 |
| Bst4CI | ACNGT | 1 cut(s) | 215 |
| Bst6I | CTCTTC | 6 cut(s) | 252, 362, 486, 521, 615, 914 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1139 |
| BstC8I | GCNNGC | 2 cut(s) | 1096, 1131 |
| BstDEI | CTNAG | 5 cut(s) | 776, 942, 986, 1475, 1567 |
| BstF5I | GGATG | 2 cut(s) | 268, 1007 |
| BstKTI | GATC | 6 cut(s) | 394, 754, 1264, 1315, 1560, 1690 |
| BstMAI | GTCTC | 2 cut(s) | 51, 488 |
| BstMBI | GATC | 6 cut(s) | 391, 751, 1261, 1312, 1557, 1687 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1100, 1139 |
| BstNI | CCWGG | 1 cut(s) | 867 |
| BstSCI | CCNGG | 1 cut(s) | 865 |
| BstV1I | GCAGC | 5 cut(s) | 292, 334, 977, 1126, 1170 |
| BstV2I | GAAGAC | 2 cut(s) | 305, 1384 |
| BstX2I | RGATCY | 3 cut(s) | 391, 751, 1687 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1014, 1288 |
| BstYI | RGATCY | 3 cut(s) | 391, 751, 1687 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1567 |
| BsuRI | GGCC | 3 cut(s) | 1195, 1473, 1605 |
| BtsCI | GGATG | 2 cut(s) | 268, 1007 |
| BtsI | GCAGTG | 4 cut(s) | 810, 1052, 1217, 1293 |
| BtsIMutI | CAGTG | 8 cut(s) | 220, 810, 919, 1052, 1095, 1217, 1293, 1672 |
| BveI | ACCTGC | 1 cut(s) | 1552 |
| Cac8I | GCNNGC | 2 cut(s) | 1096, 1131 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1139 |
| Cfr13I | GGNCC | 4 cut(s) | 87, 1194, 1247, 1670 |
| CsiI | ACCWGGT | 1 cut(s) | 865 |
| Csp6I | GTAC | 1 cut(s) | 1541 |
| CviAII | CATG | 5 cut(s) | 42, 154, 325, 628, 688 |
| CviQI | GTAC | 1 cut(s) | 1541 |
| DdeI | CTNAG | 5 cut(s) | 776, 942, 986, 1475, 1567 |
| DpnI | GATC | 6 cut(s) | 393, 753, 1263, 1314, 1559, 1689 |
| DpnII | GATC | 6 cut(s) | 391, 751, 1261, 1312, 1557, 1687 |
| Eam1104I | CTCTTC | 6 cut(s) | 252, 362, 486, 521, 615, 914 |
| EarI | CTCTTC | 6 cut(s) | 252, 362, 486, 521, 615, 914 |
| EciI | GGCGGA | 3 cut(s) | 1408, 1545, 1653 |
| Eco130I | CCWWGG | 1 cut(s) | 785 |
| Eco24I | GRGCYC | 1 cut(s) | 432 |
| Eco31I | GGTCTC | 2 cut(s) | 51, 488 |
| Eco47I | GGWCC | 3 cut(s) | 87, 1247, 1670 |
| Eco57I | CTGAAG | 5 cut(s) | 162, 510, 675, 895, 1663 |
| Eco81I | CCTNAGG | 1 cut(s) | 1567 |
| EcoO109I | RGGNCCY | 2 cut(s) | 87, 1194 |
| EcoRII | CCWGG | 1 cut(s) | 865 |
| EcoT14I | CCWWGG | 1 cut(s) | 785 |
| EcoT22I | ATGCAT | 1 cut(s) | 1183 |
| EcoT38I | GRGCYC | 1 cut(s) | 432 |
| ErhI | CCWWGG | 1 cut(s) | 785 |
| FaeI | CATG | 5 cut(s) | 45, 157, 328, 631, 691 |
| FaqI | GGGAC | 1 cut(s) | 844 |
| FatI | CATG | 5 cut(s) | 41, 153, 324, 627, 687 |
| FblI | GTMKAC | 1 cut(s) | 767 |
| Fnu4HI | GCNGC | 6 cut(s) | 281, 348, 660, 966, 1140, 1159 |
| FokI | GGATG | 2 cut(s) | 275, 994 |
| FriOI | GRGCYC | 1 cut(s) | 432 |
| Fsp4HI | GCNGC | 6 cut(s) | 281, 348, 660, 966, 1140, 1159 |
| FspBI | CTAG | 5 cut(s) | 462, 890, 954, 1104, 1337 |
| GluI | GCNGC | 6 cut(s) | 281, 348, 660, 966, 1140, 1159 |
| GsuI | CTGGAG | 1 cut(s) | 1636 |
| HaeIII | GGCC | 3 cut(s) | 1195, 1473, 1605 |
| Hin1II | CATG | 5 cut(s) | 45, 157, 328, 631, 691 |
| HinfI | GANTC | 4 cut(s) | 545, 764, 1049, 1380 |
| HphI | GGTGA | 5 cut(s) | 15, 257, 266, 1184, 1360 |
| Hpy166II | GTNNAC | 2 cut(s) | 768, 1670 |
| Hpy188I | TCNGA | 7 cut(s) | 196, 570, 655, 843, 943, 1359, 1526 |
| Hpy188III | TCNNGA | 3 cut(s) | 129, 316, 395 |
| Hpy8I | GTNNAC | 2 cut(s) | 768, 1670 |
| HpyCH4III | ACNGT | 1 cut(s) | 215 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1100, 1139 |
| HpyF3I | CTNAG | 5 cut(s) | 776, 942, 986, 1475, 1567 |
| Hsp92II | CATG | 5 cut(s) | 45, 157, 328, 631, 691 |
| Kzo9I | GATC | 6 cut(s) | 391, 751, 1261, 1312, 1557, 1687 |
| LmnI | GCTCC | 1 cut(s) | 435 |
| Lsp1109I | GCAGC | 5 cut(s) | 292, 334, 977, 1126, 1170 |
| MabI | ACCWGGT | 1 cut(s) | 865 |
| MaeI | CTAG | 5 cut(s) | 462, 890, 954, 1104, 1337 |
| MaeIII | GTNAC | 3 cut(s) | 958, 1172, 1348 |
| MalI | GATC | 6 cut(s) | 393, 753, 1263, 1314, 1559, 1689 |
| MboI | GATC | 6 cut(s) | 391, 751, 1261, 1312, 1557, 1687 |
| MfeI | CAATTG | 3 cut(s) | 420, 615, 1012 |
| MflI | RGATCY | 3 cut(s) | 391, 751, 1687 |
| MhlI | GDGCHC | 2 cut(s) | 432, 782 |
| MluCI | AATT | 8 cut(s) | 146, 420, 601, 615, 635, 758, 1012, 1235 |
| MlyI | GAGTC | 2 cut(s) | 773, 1374 |
| MmeI | TCCRAC | 3 cut(s) | 339, 581, 1279 |
| Mph1103I | ATGCAT | 1 cut(s) | 1183 |
| MseI | TTAA | 5 cut(s) | 144, 435, 516, 861, 1164 |
| MspA1I | CMGCKG | 1 cut(s) | 182 |
| MspR9I | CCNGG | 1 cut(s) | 867 |
| MunI | CAATTG | 3 cut(s) | 420, 615, 1012 |
| MvaI | CCWGG | 1 cut(s) | 867 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1100, 1139 |
| NdeII | GATC | 6 cut(s) | 391, 751, 1261, 1312, 1557, 1687 |
| NlaIII | CATG | 5 cut(s) | 45, 157, 328, 631, 691 |
| NlaIV | GGNNCC | 5 cut(s) | 89, 332, 431, 871, 1196 |
| NmuCI | GTSAC | 2 cut(s) | 1172, 1348 |
| NsiI | ATGCAT | 1 cut(s) | 1183 |
| PfeI | GAWTC | 2 cut(s) | 545, 1049 |
| PkrI | GCNGC | 6 cut(s) | 282, 349, 661, 967, 1141, 1160 |
| PleI | GAGTC | 2 cut(s) | 772, 1374 |
| PpsI | GAGTC | 2 cut(s) | 772, 1374 |
| PpuMI | RGGWCCY | 1 cut(s) | 87 |
| PsiI | TTATAA | 1 cut(s) | 446 |
| Psp5II | RGGWCCY | 1 cut(s) | 87 |
| Psp6I | CCWGG | 1 cut(s) | 865 |
| PspGI | CCWGG | 1 cut(s) | 865 |
| PspN4I | GGNNCC | 5 cut(s) | 89, 332, 431, 871, 1196 |
| PspPI | GGNCC | 4 cut(s) | 87, 1194, 1247, 1670 |
| PspPPI | RGGWCCY | 1 cut(s) | 87 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1139 |
| PsuI | RGATCY | 3 cut(s) | 391, 751, 1687 |
| PvuII | CAGCTG | 1 cut(s) | 182 |
| RsaI | GTAC | 1 cut(s) | 1542 |
| RsaNI | GTAC | 1 cut(s) | 1541 |
| SaqAI | TTAA | 5 cut(s) | 144, 435, 516, 861, 1164 |
| SatI | GCNGC | 6 cut(s) | 281, 348, 660, 966, 1140, 1159 |
| Sau3AI | GATC | 6 cut(s) | 391, 751, 1261, 1312, 1557, 1687 |
| Sau96I | GGNCC | 4 cut(s) | 87, 1194, 1247, 1670 |
| SchI | GAGTC | 2 cut(s) | 773, 1374 |
| ScrFI | CCNGG | 1 cut(s) | 867 |
| SduI | GDGCHC | 2 cut(s) | 432, 782 |
| SexAI | ACCWGGT | 1 cut(s) | 865 |
| SinI | GGWCC | 3 cut(s) | 87, 1247, 1670 |
| SmlI | CTYRAG | 1 cut(s) | 386 |
| SmoI | CTYRAG | 1 cut(s) | 386 |
| Sse9I | AATT | 8 cut(s) | 146, 420, 601, 615, 635, 758, 1012, 1235 |
| SsiI | CCGC | 4 cut(s) | 659, 1393, 1530, 1638 |
| SspMI | CTAG | 5 cut(s) | 462, 890, 954, 1104, 1337 |
| StyD4I | CCNGG | 1 cut(s) | 865 |
| StyI | CCWWGG | 1 cut(s) | 785 |
| TaaI | ACNGT | 1 cut(s) | 215 |
| TaqI | TCGA | 3 cut(s) | 762, 1152, 1383 |
| TasI | AATT | 8 cut(s) | 146, 420, 601, 615, 635, 758, 1012, 1235 |
| TauI | GCSGC | 1 cut(s) | 662 |
| TfiI | GAWTC | 2 cut(s) | 545, 1049 |
| Tru1I | TTAA | 5 cut(s) | 144, 435, 516, 861, 1164 |
| Tru9I | TTAA | 5 cut(s) | 144, 435, 516, 861, 1164 |
| TscAI | CASTG | 8 cut(s) | 220, 810, 919, 1059, 1095, 1224, 1293, 1672 |
| TseFI | GTSAC | 2 cut(s) | 1172, 1348 |
| TseI | GCWGC | 5 cut(s) | 280, 347, 965, 1139, 1158 |
| Tsp45I | GTSAC | 2 cut(s) | 1172, 1348 |
| TspDTI | ATGAA | 9 cut(s) | 30, 99, 170, 255, 313, 676, 910, 1052, 1062 |
| TspRI | CASTG | 8 cut(s) | 220, 810, 919, 1059, 1095, 1224, 1293, 1672 |
| VpaK11BI | GGWCC | 3 cut(s) | 87, 1247, 1670 |
| XapI | RAATTY | 2 cut(s) | 146, 601 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1241 |
| XmiI | GTMKAC | 1 cut(s) | 767 |
| XspI | CTAG | 5 cut(s) | 462, 890, 954, 1104, 1337 |
| Zsp2I | ATGCAT | 1 cut(s) | 1183 |