Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0017777

Physical Location & Seq

Genomic Coordinates Reverse (-)

14584350 .. 14586623

Gene Structure 2274 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0089500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1824 bp

ATGCAGCGACTAATCCTCATATCAGCCTATTGCATATTAATGTCAATGGCTTTCTTCAAGGTGTGCCATAATGCATGCACAGAATCAGAGTGTGACCATGATGATCATCGCCTTGCTATTCATGTCCCGGTCAAGCGCGTCCGTTGTGGTTATTTTCAGCAGCAGAGCGACAAGACGGTTGTTGAGCAGAAGCAAATGGTAGTAAAATACTTTGTGAAACACATAGATTATAAGCACCAGAAAATTCAAGTACATATTCCAGATGATTGCTTACTCCTAAAGCAATTAGAAACCCCAAACATGAAGCCAATGTTCTTTCCTTTCAACTTCTCAGAATACGATGCGGATTGCATCAGCTTATTCAACTGTCCCACAGCTATTTATCCGCACAAACAAGTCCCCTGCCTCAGTGACCTGGTATACAAAAATATATATGCCGTTTCTTCGGACGTTCAAGCCCCACAGTACTGTAAAAAGATGTATGATTTAACAAATCCATATGTACTTCATTTGAAAGAAATATATCGATATGAACTTATGTATCGATCGAATCCAGAGTACCATATTTGGTGGTCTACACCAAATTGTACAGAATGTGAAGCGAAGCGTAAGAAGTGTCAATTGAAGATCCACGGCACCAAAAGTGAAATTGAATGTGTTCATTTTAGCAAACCAAGTGCAACAAAAACATTAGTGTCTACAGGTGCAACTGTGACTACAATCATTTTACTAATATCGGTGACTGTAGTCTATAGATCTCATAAAAAGGAAAAGGAGAATCAATTGAAAATTGAAACATTCCTAGAGGATTACAAAGCGCTCAAGCCAAGCAGATATTCCTACGCAGATATCAAAAGAATTACAAATCAATTTGAGGACAAGCTGGGCCAAGGAGCGTATGGAACTGTTTTCAAAGGGAAGCTTTCATCTGAAGTTTTTGTTGCTGTTAAAGTCCTCAACAATTCCGAAAACGGAGATGGGGAAGAATTCATCAATGAGGTGGGAACAATGGATCATATCCACCATGTCAACGTGGTCCGCATGGTTGGCTTCTGTGCAGAAGGATTTAGACGAGCTCTTGTTTATGAGTTTTTCCCCAATGGTTCACTACAGGATTTCATTTCATCAGCAGACAATAAGAATTCTTTCCTTGGTTGGGATAAGTTAAAAGATATTTCTCTAGGCATTGCCAAAGGAATTGAATATCTACACCAAGGATGCGATCAACGAATTCTTCATTTTGATATCAAACCTCAAAATGTTTTGCTAGATCAAAACTTCACTCCAAAAATTTCTGATTTTGGGATGTCCAAGTTGTGTGCCAAGGATCAAAGTATAGTGTCAATGACTATGGCTAGGGGGACTATAGGCTATATTGCACCTGAAGTGTTCTCCCGGAATTTTGGAAATGTGTCATATAAGTCAGATGTCTATAGTTTTGGAATGTTGCTGCTCGAGATTGTAGGAGGGAGGAAGAATATTGGTGAAACCATGGATAACACTGGGGAAGTATACTACCCAGAATGGATACATAATCTTTTAGATGAAGGGGAAGACCTTCGAGTCCATATTGGGGAAGAAGGATCGAGAATAGATTCTCGAATTCCAAAAGAATTAGCAATTGTAGGCCTTTGGTGTATCCAATGGCACCCAATGAATCGTCCATCCATGAAATCAGTGGTTCAGATGTTGGGAGGAAGAGAAAATTTAACCATGCCACCTAATCCTTTTGCGTCTACAGGTCCTACAAGAACAAATGCAACAAGTCGCCCGGCTGCAAGACGCTTCAACCTCGACTTAGAAGCAATTGTTGAATTAGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004721 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019538 GO:0023052 GO:0036211 GO:0042578 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NIF

Protein Analysis

607

Amino Acids

69.51

Weight (kDa)

7.27

Isoelectric Point (pI)

43.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	290 - 564	2.8e-46	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	291 - 562	4.3e-47	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017777)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr1g0330581
rosa_multiflora	Rmu_sc0000167.1_g000006 Rmu_sc0000815.1_g000001
rosa_roxburghii	Rroxscaffold_4G00319740
rosa_rugosa	Rorug01G0089400 Rorug01G0089500 Rorug01G0089600
rosa_samantha	Rh1AG107700 Rh1CG103500 Rh1DG113100
rosa_wichuraiana	Rw0G004380 Rw1G008920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	231
AasI	GACNNNNNNGTC	1 cut(s)	1562
AccB1I	GGYRCC	2 cut(s)	635, 1647
AccI	GTMKAC	5 cut(s)	420, 575, 698, 1512, 1736
AccII	CGCG	1 cut(s)	138
AciI	CCGC	3 cut(s)	344, 386, 1039
AclWI	GGATC	4 cut(s)	622, 1020, 1335, 1591
AcsI	RAATTY	8 cut(s)	243, 986, 1141, 1230, 1290, 1399, 1602, 1705
AcuI	CTGAAG	2 cut(s)	951, 1404
AfaI	GTAC	5 cut(s)	252, 467, 504, 560, 589
AfeI	AGCGCT	1 cut(s)	819
AfiI	CCNNNNNNNGG	2 cut(s)	1156, 1573
AjnI	CCWGG	1 cut(s)	414
AjuI	GAANNNNNNNTTGG	2 cut(s)	820, 852
AluBI	AGCT	5 cut(s)	357, 377, 883, 922, 1076
AluI	AGCT	5 cut(s)	357, 377, 883, 922, 1076
Alw21I	GWGCWC	1 cut(s)	1078
AlwI	GGATC	4 cut(s)	622, 1020, 1335, 1591
Ama87I	CYCGRG	1 cut(s)	1454
Aor51HI	AGCGCT	1 cut(s)	819
AoxI	GGCC	2 cut(s)	886, 1627
ApeKI	GCWGC	4 cut(s)	4, 160, 1450, 1775
ApoI	RAATTY	8 cut(s)	243, 986, 1141, 1230, 1290, 1399, 1602, 1705
AseI	ATTAAT	1 cut(s)	38
Asp700I	GAANNNNTTC	4 cut(s)	657, 1145, 1557, 1594
AspLEI	GCGC	2 cut(s)	138, 820
AspS9I	GGNCC	3 cut(s)	886, 1036, 1742
AsuC2I	CCSGG	3 cut(s)	128, 1396, 1772
AsuHPI	GGTGA	2 cut(s)	751, 1496
AvaI	CYCGRG	1 cut(s)	1454
AvaII	GGWCC	2 cut(s)	1036, 1742
BaeI	ACNNNNGTAYC	2 cut(s)	524, 557
BanI	GGYRCC	2 cut(s)	635, 1647
BanII	GRGCYC	1 cut(s)	1078
BbsI	GAAGAC	1 cut(s)	1560
Bbv12I	GWGCWC	1 cut(s)	1078
BbvI	GCAGC	4 cut(s)	16, 172, 1437, 1762
BccI	CCATC	2 cut(s)	971, 1672
BceAI	ACGGC	2 cut(s)	422, 649
BciT130I	CCWGG	1 cut(s)	416
BciVI	GTATCC	2 cut(s)	1521, 1649
BclI	TGATCA	1 cut(s)	103
BcnI	CCSGG	3 cut(s)	128, 1396, 1772
BfaI	CTAG	4 cut(s)	803, 1181, 1268, 1356
BfmI	CTRYAG	7 cut(s)	699, 744, 751, 1109, 1365, 1432, 1737
BfoI	RGCGCY	1 cut(s)	821
BfuI	GTATCC	2 cut(s)	1521, 1649
BglII	AGATCT	1 cut(s)	755
BisI	GCNGC	4 cut(s)	5, 161, 1451, 1776
BlsI	GCNGC	4 cut(s)	6, 162, 1452, 1777
BmcAI	AGTACT	1 cut(s)	467
Bme1390I	CCNGG	4 cut(s)	128, 416, 1396, 1772
Bme18I	GGWCC	2 cut(s)	1036, 1742
BmeT110I	CYCGRG	1 cut(s)	1454
BmgT120I	GGNCC	3 cut(s)	886, 1036, 1742
BmiI	GGNNCC	2 cut(s)	637, 1649
BmrFI	CCNGG	4 cut(s)	128, 416, 1396, 1772
BmrI	ACTGGG	1 cut(s)	1512
BmsI	GCATC	3 cut(s)	331, 360, 1208
BmuI	ACTGGG	1 cut(s)	1512
BoxI	GACNNNNGTC	1 cut(s)	746
BpiI	GAAGAC	1 cut(s)	1560
BpuEI	CTTGAG	1 cut(s)	806
BpuMI	CCSGG	3 cut(s)	128, 1396, 1772
Bsa29I	ATCGAT	2 cut(s)	526, 544
BsaBI	GATNNNNATC	1 cut(s)	105
BsaJI	CCNNGG	6 cut(s)	631, 889, 1150, 1213, 1323, 1491
Bsc4I	CCNNNNNNNGG	2 cut(s)	1156, 1573
Bse1I	ACTGG	1 cut(s)	1507
Bse3DI	GCAATG	1 cut(s)	1185
Bse8I	GATNNNNATC	1 cut(s)	105
BseBI	CCWGG	1 cut(s)	416
BseCI	ATCGAT	2 cut(s)	526, 544
BseDI	CCNNGG	6 cut(s)	631, 889, 1150, 1213, 1323, 1491
BseGI	GGATG	3 cut(s)	1223, 1311, 1664
BseJI	GATNNNNATC	1 cut(s)	105
BseLI	CCNNNNNNNGG	2 cut(s)	1156, 1573
BseMI	GCAATG	1 cut(s)	1185
BseMII	CTCAG	2 cut(s)	345, 421
BseNI	ACTGG	1 cut(s)	1507
BseXI	GCAGC	4 cut(s)	16, 172, 1437, 1762
BseYI	CCCAGC	1 cut(s)	883
BsgI	GTGCAG	1 cut(s)	1077
Bsh1236I	CGCG	1 cut(s)	138
Bsh1285I	CGRYCG	1 cut(s)	548
BshFI	GGCC	2 cut(s)	888, 1629
BshNI	GGYRCC	2 cut(s)	635, 1647
BshVI	ATCGAT	2 cut(s)	526, 544
BsiEI	CGRYCG	1 cut(s)	548
BsiHKAI	GWGCWC	1 cut(s)	1078
BsiHKCI	CYCGRG	1 cut(s)	1454
BsiSI	CCGG	3 cut(s)	128, 1396, 1772
BslFI	GGGAC	4 cut(s)	110, 354, 383, 1375
BslI	CCNNNNNNNGG	2 cut(s)	1156, 1573
BsmFI	GGGAC	4 cut(s)	110, 354, 383, 1375
BsnI	GGCC	2 cut(s)	888, 1629
BsoBI	CYCGRG	1 cut(s)	1454
Bsp1286I	GDGCHC	1 cut(s)	1078
Bsp1407I	TGTACA	1 cut(s)	587
Bsp143I	GATC	9 cut(s)	103, 545, 627, 755, 1012, 1222, 1270, 1327, 1583
Bsp19I	CCATGG	1 cut(s)	1491
BspACI	CCGC	3 cut(s)	344, 386, 1039
BspANI	GGCC	2 cut(s)	888, 1629
BspCNI	CTCAG	2 cut(s)	344, 420
BspDI	ATCGAT	2 cut(s)	526, 544
BspFNI	CGCG	1 cut(s)	138
BspLI	GGNNCC	2 cut(s)	637, 1649
BspPI	GGATC	4 cut(s)	622, 1020, 1335, 1591
BspT107I	GGYRCC	2 cut(s)	635, 1647
BsrDI	GCAATG	1 cut(s)	1185
BsrGI	TGTACA	1 cut(s)	587
BsrI	ACTGG	1 cut(s)	1507
BssECI	CCNNGG	6 cut(s)	631, 889, 1150, 1213, 1323, 1491
BssMI	GATC	9 cut(s)	103, 545, 627, 755, 1012, 1222, 1270, 1327, 1583
BssNAI	GTATAC	2 cut(s)	421, 1513
BssT1I	CCWWGG	5 cut(s)	889, 1150, 1213, 1323, 1491
Bst1107I	GTATAC	2 cut(s)	421, 1513
Bst2UI	CCWGG	1 cut(s)	416
Bst4CI	ACNGT	7 cut(s)	178, 368, 465, 470, 712, 745, 907
Bst6I	CTCTTC	1 cut(s)	1693
BstAUI	TGTACA	1 cut(s)	587
BstC8I	GCNNGC	1 cut(s)	76
BstDEI	CTNAG	3 cut(s)	331, 407, 1798
BstDSI	CCRYGG	2 cut(s)	631, 1491
BstF5I	GGATG	3 cut(s)	1223, 1311, 1664
BstFNI	CGCG	1 cut(s)	138
BstH2I	RGCGCY	1 cut(s)	821
BstHHI	GCGC	2 cut(s)	138, 820
BstKTI	GATC	9 cut(s)	106, 548, 630, 758, 1015, 1225, 1273, 1330, 1586
BstMBI	GATC	9 cut(s)	103, 545, 627, 755, 1012, 1222, 1270, 1327, 1583
BstMCI	CGRYCG	1 cut(s)	548
BstMWI	GCNNNNNNNGC	1 cut(s)	1047
BstNI	CCWGG	1 cut(s)	416
BstNSI	RCATGY	1 cut(s)	78
BstPAI	GACNNNNGTC	1 cut(s)	746
BstSCI	CCNGG	4 cut(s)	126, 414, 1394, 1770
BstSFI	CTRYAG	7 cut(s)	699, 744, 751, 1109, 1365, 1432, 1737
BstUI	CGCG	1 cut(s)	138
BstV1I	GCAGC	4 cut(s)	16, 172, 1437, 1762
BstV2I	GAAGAC	1 cut(s)	1560
BstX2I	RGATCY	2 cut(s)	627, 755
BstYI	RGATCY	2 cut(s)	627, 755
BstZ17I	GTATAC	2 cut(s)	421, 1513
Bsu15I	ATCGAT	2 cut(s)	526, 544
BsuI	GTATCC	2 cut(s)	1521, 1649
BsuRI	GGCC	2 cut(s)	888, 1629
BsuTUI	ATCGAT	2 cut(s)	526, 544
BtgI	CCRYGG	2 cut(s)	631, 1491
BtgZI	GCGATG	1 cut(s)	92
BtsCI	GGATG	3 cut(s)	1223, 1311, 1664
BtsIMutI	CAGTG	3 cut(s)	415, 1500, 1683
Cac8I	GCNNGC	1 cut(s)	76
CfoI	GCGC	2 cut(s)	138, 820
Cfr13I	GGNCC	3 cut(s)	886, 1036, 1742
ClaI	ATCGAT	2 cut(s)	526, 544
CseI	GACGC	3 cut(s)	127, 1722, 1791
CsiI	ACCWGGT	1 cut(s)	414
Csp6I	GTAC	5 cut(s)	251, 466, 503, 559, 588
CviAII	CATG	9 cut(s)	75, 98, 122, 301, 1025, 1042, 1492, 1669, 1714
CviQI	GTAC	5 cut(s)	251, 466, 503, 559, 588
DdeI	CTNAG	3 cut(s)	331, 407, 1798
DpnI	GATC	9 cut(s)	105, 547, 629, 757, 1014, 1224, 1272, 1329, 1585
DpnII	GATC	9 cut(s)	103, 545, 627, 755, 1012, 1222, 1270, 1327, 1583
DrdI	GACNNNNNNGTC	1 cut(s)	1562
DseDI	GACNNNNNNGTC	1 cut(s)	1562
Eam1104I	CTCTTC	1 cut(s)	1693
EarI	CTCTTC	1 cut(s)	1693
Ecl136II	GAGCTC	1 cut(s)	1076
Eco130I	CCWWGG	5 cut(s)	889, 1150, 1213, 1323, 1491
Eco147I	AGGCCT	1 cut(s)	1629
Eco24I	GRGCYC	1 cut(s)	1078
Eco32I	GATATC	2 cut(s)	850, 1246
Eco47I	GGWCC	2 cut(s)	1036, 1742
Eco47III	AGCGCT	1 cut(s)	819
Eco53kI	GAGCTC	1 cut(s)	1076
Eco57I	CTGAAG	2 cut(s)	951, 1404
Eco88I	CYCGRG	1 cut(s)	1454
EcoICRI	GAGCTC	1 cut(s)	1076
EcoO109I	RGGNCCY	1 cut(s)	1742
EcoRI	GAATTC	4 cut(s)	986, 1141, 1230, 1602
EcoRII	CCWGG	1 cut(s)	414
EcoRV	GATATC	2 cut(s)	850, 1246
EcoT14I	CCWWGG	5 cut(s)	889, 1150, 1213, 1323, 1491
EcoT22I	ATGCAT	1 cut(s)	76
EcoT38I	GRGCYC	1 cut(s)	1078
ErhI	CCWWGG	5 cut(s)	889, 1150, 1213, 1323, 1491
FaeI	CATG	9 cut(s)	78, 101, 125, 304, 1028, 1045, 1495, 1672, 1717
FalI	AAGNNNNNCTT	2 cut(s)	906, 938
FaqI	GGGAC	4 cut(s)	110, 354, 383, 1375
FatI	CATG	9 cut(s)	74, 97, 121, 300, 1024, 1041, 1491, 1668, 1713
FauNDI	CATATG	1 cut(s)	499
FbaI	TGATCA	1 cut(s)	103
FblI	GTMKAC	5 cut(s)	420, 575, 698, 1512, 1736
Fnu4HI	GCNGC	4 cut(s)	5, 161, 1451, 1776
FokI	GGATG	3 cut(s)	1230, 1318, 1651
FriOI	GRGCYC	1 cut(s)	1078
Fsp4HI	GCNGC	4 cut(s)	5, 161, 1451, 1776
FspBI	CTAG	4 cut(s)	803, 1181, 1268, 1356
GlaI	GCGC	2 cut(s)	137, 819
GluI	GCNGC	4 cut(s)	5, 161, 1451, 1776
GsaI	CCCAGC	1 cut(s)	887
HaeII	RGCGCY	1 cut(s)	821
HaeIII	GGCC	2 cut(s)	888, 1629
HapII	CCGG	3 cut(s)	128, 1396, 1772
HgaI	GACGC	3 cut(s)	127, 1722, 1791
HhaI	GCGC	2 cut(s)	138, 820
Hin1II	CATG	9 cut(s)	78, 101, 125, 304, 1028, 1045, 1495, 1672, 1717
Hin6I	GCGC	2 cut(s)	136, 818
HinP1I	GCGC	2 cut(s)	136, 818
HincII	GTYRAC	1 cut(s)	1030
HindII	GTYRAC	1 cut(s)	1030
HindIII	AAGCTT	1 cut(s)	920
HinfI	GANTC	6 cut(s)	83, 550, 778, 1563, 1595, 1657
HpaII	CCGG	3 cut(s)	128, 1396, 1772
HphI	GGTGA	2 cut(s)	751, 1496
Hpy166II	GTNNAC	7 cut(s)	421, 576, 699, 1030, 1106, 1513, 1737
Hpy188I	TCNGA	8 cut(s)	88, 334, 448, 931, 967, 1297, 1426, 1686
Hpy188III	TCNNGA	5 cut(s)	260, 554, 1456, 1587, 1599
Hpy8I	GTNNAC	7 cut(s)	421, 576, 699, 1030, 1106, 1513, 1737
HpyAV	CCTTC	4 cut(s)	1055, 1541, 1568, 1574
HpyCH4III	ACNGT	7 cut(s)	178, 368, 465, 470, 712, 745, 907
HpyCH4IV	ACGT	2 cut(s)	450, 1032
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1047
HpyF3I	CTNAG	3 cut(s)	331, 407, 1798
HpySE526I	ACGT	2 cut(s)	450, 1032
Hsp92II	CATG	9 cut(s)	78, 101, 125, 304, 1028, 1045, 1495, 1672, 1717
HspAI	GCGC	2 cut(s)	136, 818
Ksp22I	TGATCA	1 cut(s)	103
Kzo9I	GATC	9 cut(s)	103, 545, 627, 755, 1012, 1222, 1270, 1327, 1583
LmnI	GCTCC	1 cut(s)	893
Lsp1109I	GCAGC	4 cut(s)	16, 172, 1437, 1762
LweI	GCATC	3 cut(s)	331, 360, 1208
MabI	ACCWGGT	1 cut(s)	414
MaeI	CTAG	4 cut(s)	803, 1181, 1268, 1356
MaeII	ACGT	2 cut(s)	450, 1032
MaeIII	GTNAC	4 cut(s)	92, 410, 712, 739
MalI	GATC	9 cut(s)	105, 547, 629, 757, 1014, 1224, 1272, 1329, 1585
MboI	GATC	9 cut(s)	103, 545, 627, 755, 1012, 1222, 1270, 1327, 1583
MboII	GAAGA	9 cut(s)	46, 435, 637, 995, 1226, 1486, 1565, 1589, 1710
MfeI	CAATTG	4 cut(s)	620, 782, 1620, 1806
MflI	RGATCY	2 cut(s)	627, 755
MhlI	GDGCHC	1 cut(s)	1078
MlyI	GAGTC	1 cut(s)	1572
Mph1103I	ATGCAT	1 cut(s)	76
MroXI	GAANNNNTTC	4 cut(s)	657, 1145, 1557, 1594
MseI	TTAA	5 cut(s)	38, 488, 948, 1166, 1709
MslI	CAYNNNNRTG	1 cut(s)	38
MspI	CCGG	3 cut(s)	128, 1396, 1772
MspR9I	CCNGG	4 cut(s)	128, 416, 1396, 1772
MunI	CAATTG	4 cut(s)	620, 782, 1620, 1806
MvaI	CCWGG	1 cut(s)	416
MvnI	CGCG	1 cut(s)	138
MwoI	GCNNNNNNNGC	1 cut(s)	1047
NciI	CCSGG	3 cut(s)	128, 1396, 1772
NcoI	CCATGG	1 cut(s)	1491
NdeI	CATATG	1 cut(s)	499
NdeII	GATC	9 cut(s)	103, 545, 627, 755, 1012, 1222, 1270, 1327, 1583
NlaIII	CATG	9 cut(s)	78, 101, 125, 304, 1028, 1045, 1495, 1672, 1717
NlaIV	GGNNCC	2 cut(s)	637, 1649
NmuCI	GTSAC	4 cut(s)	92, 410, 712, 739
NsiI	ATGCAT	1 cut(s)	76
NspI	RCATGY	1 cut(s)	78
PaeI	GCATGC	1 cut(s)	78
PaeR7I	CTCGAG	1 cut(s)	1454
PceI	AGGCCT	1 cut(s)	1629
PdmI	GAANNNNTTC	4 cut(s)	657, 1145, 1557, 1594
PfeI	GAWTC	5 cut(s)	83, 550, 778, 1595, 1657
PfoI	TCCNGGA	1 cut(s)	1394
PkrI	GCNGC	4 cut(s)	6, 162, 1452, 1777
Ple19I	CGATCG	1 cut(s)	548
PleI	GAGTC	1 cut(s)	1571
PpsI	GAGTC	1 cut(s)	1571
PpuMI	RGGWCCY	1 cut(s)	1742
PshAI	GACNNNNGTC	1 cut(s)	746
PshBI	ATTAAT	1 cut(s)	38
PsiI	TTATAA	1 cut(s)	231
Psp124BI	GAGCTC	1 cut(s)	1078
Psp5II	RGGWCCY	1 cut(s)	1742
Psp6I	CCWGG	1 cut(s)	414
PspFI	CCCAGC	1 cut(s)	883
PspGI	CCWGG	1 cut(s)	414
PspN4I	GGNNCC	2 cut(s)	637, 1649
PspPI	GGNCC	3 cut(s)	886, 1036, 1742
PspPPI	RGGWCCY	1 cut(s)	1742
PsuI	RGATCY	2 cut(s)	627, 755
PvuI	CGATCG	1 cut(s)	548
RsaI	GTAC	5 cut(s)	252, 467, 504, 560, 589
RsaNI	GTAC	5 cut(s)	251, 466, 503, 559, 588
RseI	CAYNNNNRTG	1 cut(s)	38
SacI	GAGCTC	1 cut(s)	1078
SaqAI	TTAA	5 cut(s)	38, 488, 948, 1166, 1709
SatI	GCNGC	4 cut(s)	5, 161, 1451, 1776
Sau3AI	GATC	9 cut(s)	103, 545, 627, 755, 1012, 1222, 1270, 1327, 1583
Sau96I	GGNCC	3 cut(s)	886, 1036, 1742
ScaI	AGTACT	1 cut(s)	467
SchI	GAGTC	1 cut(s)	1572
ScrFI	CCNGG	4 cut(s)	128, 416, 1396, 1772
SduI	GDGCHC	1 cut(s)	1078
SexAI	ACCWGGT	1 cut(s)	414
SfaNI	GCATC	3 cut(s)	331, 360, 1208
SfcI	CTRYAG	7 cut(s)	699, 744, 751, 1109, 1365, 1432, 1737
Sfr274I	CTCGAG	1 cut(s)	1454
SinI	GGWCC	2 cut(s)	1036, 1742
SlaI	CTCGAG	1 cut(s)	1454
SmiMI	CAYNNNNRTG	1 cut(s)	38
SmlI	CTYRAG	2 cut(s)	821, 1454
SmoI	CTYRAG	2 cut(s)	821, 1454
SphI	GCATGC	1 cut(s)	78
SseBI	AGGCCT	1 cut(s)	1629
SsiI	CCGC	3 cut(s)	344, 386, 1039
SspI	AATATT	1 cut(s)	1480
SspMI	CTAG	4 cut(s)	803, 1181, 1268, 1356
SstI	GAGCTC	1 cut(s)	1078
StuI	AGGCCT	1 cut(s)	1629
StyD4I	CCNGG	4 cut(s)	126, 414, 1394, 1770
StyI	CCWWGG	5 cut(s)	889, 1150, 1213, 1323, 1491
TaaI	ACNGT	7 cut(s)	178, 368, 465, 470, 712, 745, 907
TaiI	ACGT	2 cut(s)	453, 1035
TaqI	TCGA	8 cut(s)	526, 544, 548, 1455, 1561, 1586, 1600, 1794
TatI	WGTACW	4 cut(s)	250, 465, 502, 587
TfiI	GAWTC	5 cut(s)	83, 550, 778, 1595, 1657
Tru1I	TTAA	5 cut(s)	38, 488, 948, 1166, 1709
Tru9I	TTAA	5 cut(s)	38, 488, 948, 1166, 1709
TscAI	CASTG	3 cut(s)	415, 1507, 1683
TseFI	GTSAC	4 cut(s)	92, 410, 712, 739
TseI	GCWGC	4 cut(s)	4, 160, 1450, 1775
Tsp45I	GTSAC	4 cut(s)	92, 410, 712, 739
TspGWI	ACGGA	2 cut(s)	131, 987
TspRI	CASTG	3 cut(s)	415, 1507, 1683
VpaK11BI	GGWCC	2 cut(s)	1036, 1742
VspI	ATTAAT	1 cut(s)	38
XapI	RAATTY	8 cut(s)	243, 986, 1141, 1230, 1290, 1399, 1602, 1705
XceI	RCATGY	1 cut(s)	78
XcmI	CCANNNNNNNNNTGG	2 cut(s)	896, 1675
XhoI	CTCGAG	1 cut(s)	1454
XmiI	GTMKAC	5 cut(s)	420, 575, 698, 1512, 1736
XmnI	GAANNNNTTC	4 cut(s)	657, 1145, 1557, 1594
XspI	CTAG	4 cut(s)	803, 1181, 1268, 1356
ZrmI	AGTACT	1 cut(s)	467
Zsp2I	ATGCAT	1 cut(s)	76

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.