Rorug01G0406900

Protein of unknown function (DUF819)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0009936
Physical Location & Seq
Reverse (-)
51344642 .. 51347575
2934 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0406900.1

Sequence Viewer

Length: 2934 bp
ATGGCCGAAGCTCTAGTTAACGTTCTCCTTGAGCGTTTGGCTACGATCACCTTAGACAAGGTCCAAGAAGAGCTGAATCTGGTTATTGGGGTTGAGAAAGAAGTCAAAAGTCTCACCCGCAATCTCAGAGCTATTCAAGCTGTGCTCCAGGATGCAGAACAGAGACAAGTGACAGAGTCCAGTGTGAGACTCTGGCTGAATGAACTGAATGAAGTTTCCTACGAGATGGATGAAGTGTTGGATGAGTGGATCACTGAAGTTCGAAAGCAACAAATGGAGAAACAAGAAAACCAAGGTGAAAATCCTCTTGTTGCTACGAAGAAGAAGGTACGCTTCCCCTTTCCTTCCTCTTGCTTTCGTTTTGGCCAAGTCAGGCAGTTAAGTCATCGTCGCGATATTGCTATGAGGATAAGAGAACTAAATGAAAGATTAGCTTTGATTGAAAAAGAAAAACAAAGCTTTAATTTTCAAAACACCACAAAAAGCCTTGAACTGCCTGCAAGGCAAAAAACAACTTCTTTCCCAGGTGACAAAACGTTTGGTCGAGATAATGAGAAGAAAATAATACTAAGCAAGTTGCTGAGCCAGAGTAGTCAAGAGGAAGAAGTCCCTATTATCATCCCTATTATAGGGATGGGGGGGATGGGGAAAACAACACTTTCTCAACTTGTCTACAATGATGAAAAAGTGAAGGCTCATTTTGAACATAGAATATGGGTTTGTGTCTCAGACCCTTTTGATGAGATCAAGATTGCTAAAGCTATAATTGAAGGTCTTGGTAAAGATAATACCTCAAGGAATTCAAATGAGTTGCAAACTTTATTGCAATGGATATATGAATTGATTGAGGGCAAAAAACTCCTCCTTATCCTAGATGATGTGTGGAACCCAAACCGTGATCAATGGGAGGAATTTATCAAACCTTTCCGTAGTTGTGCTGTGGGTAGTAGAGTACTGGTCACTACGCGGAAGGACGAGGTTGCTACTGTGATGAAAGCAACTACTCACAAGCTCTATTTGAAAGAGTTGAATGAAGAACTTTGTTTGTCGTTGTTTTATTACAGTGCAGGCATTGATGAAAGTGAGTGTAAAATGTTTGAAGCCATTGGTAAACAGATTGTAAAAAAGTGTAAAGGGTTGCCTCTTGCTGCAAAGACATTAGGTAGCCACATGCGCGACAAGATAACAATTAAGGAATGGCGTGATGTTTTAAATAGTGAGATATGGGAATTGGAAGAGATCGAACAATATGTTTTTCGGCCATTACTACTAAGTTACCATGATTTGCCCCCAATACTCAAGCGTTGTCTTTTGTTTTGTGTTATATTCCCAAAAGATTACTTGCTTGATAGAGATAATTTAATTGAGTTATGGATGGCGCAAGATTATTTGAATGAGGAAGGGAGGAAAGAGAAAAGAATAAAAGGTCAAAAGTGTTTTCATGACTTACTGATGCGATCTTTCTTCCAGGAATTTATGGTGGATGAATATGGAGAAACAAGCTGCAAAATGCATGATATTGTACATGATTTTTTACAATATTTGACCAAGAAAGAGTGTCTTATTGTGGATTTTAAGGCAGGGGATAGTGAGGGAATGGTAGTGCCGGATGTTGATAAGGTTCGTCATTTGACTTTGATGCAGTTGTCACAAAGTGAACTTTTGGCTTCTTTTCGCAATTGTAAACATTTGCGTACCTTGATAGCTTTTGATTCATCAATTGATTCAACTTGCCTAGAATTAGTTTTACAGTTGAAATGCCTTAGGACATTGAACTTGTCTAAGAGTAACATTGAAGAAATTCCAAGAGAAATGGGTGGGTTGATCCATTTGAGGTATCTTGATTTATCTCATAATGATTTAAAGGAACTACCCAACGCCCTGAGTAGTTTGTACAATCTTCAAACCTTGCGACTTGTGAAATGCTCTCATCTCAAGAAAGTAGATTTGGCAAGGCTGATTAATATCAGGCATCTTTATGTTGAGGGCTGTGAGCATCTAAAGTTAATGGGGCTTTCTAGGTTGATAAATCTGGAAACCCTTGACACATTATATGTCCACGGTGATGGCGAGTTAGGAGATTTGAAAAACTTGAACCAGCTTCAAGGATGTCTTGCTATTAAAAATGCGGGAAGATTAACGAGCGAGTCCGAGCAACCAAATTTGGTGAATAAGGTGAATCTCCTTCATTTGACTTTGGACCTTGAATGCCGTGCTGAAGCTGAAGCTGAACGGGTCTCTTCTTCTTCCGGTTCCCTTAATGATGATCAACAGCGACAAATTGAAGAAATGATCTCTCGGTACGAAGAAATACTGCGCCCACCTCCGGGTTTGGAATCATTGTCAATCACAAGCTATATTGGCCGCAGCTTGTGCAGCGATTGGTTTTTGTCTTTCCACAGCTTGAGATGGCTTACCCTGGGTTTTTGCTTCAATTGCAAGTTTTTGCCTCCTTTAGGAAAGTTGCCGTCCCTTGAAAGTTTGAATCTGGTGCATCTTTCTGCTCTGGAAAAGCTAGGAGTTGAGTTTCTGGGAATAGAACCAGGAACACCGACGTCCTTTATCTCATTTCCAAAATTGAAACAACTTGCCTTCAACTGGATACCGGCCTTGAAAGAGTGGGAAGGAGTGGGCGACTGCAGCTGGGAGATAATGCCACGCCTTTCTTCTTTGGGAGTTTATGAGTGCCCAAGTCTAAAAGCGTTGCCGGACTTCCTGTGGAGGACACCACTACGGAAATTACACATTAGAGACATTGCAAGTGATGCTATTCTTCCAAATGTCTACCAAAGAGAAGGAGGTGAGGAGTGGCCCAAGATATCTCACATCCCAGAAATCAGAATAGGCAACCATTGGATCTATAATGAAGAACAGGATCCCAAGGGTGACGATATTGAAGTTATTCCACGCGTAACCAGCTGTGTAATTTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF819

Protein Analysis

977

Amino Acids

112.55

Weight (kDa)

5.78

Isoelectric Point (pI)

48.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 6 - 95 1.4e-23 Rx N-terminal domain
NB-ARC PF00931 190 - 355 2e-35 NB-ARC domain
WHD_DRP PF23559 442 - 511 1.3e-22 Disease resistance protein Winged helix domain
LRR_14 PF23598 563 - 868 2e-16 Leucine-rich repeat region
LRR_8 PF13855 588 - 641 4.8e-08 Leucine rich repeat
LRR_R13L1-DRL21 PF25019 692 - 832 7.6e-21 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2558
AccI GTMKAC 2 cut(s) 672, 2784
AccII CGCG 4 cut(s) 393, 967, 1176, 2910
AciI CCGC 4 cut(s) 118, 967, 2129, 2365
AclI AACGTT 2 cut(s) 21, 536
AclWI GGATC 5 cut(s) 257, 1819, 2864, 2870, 2883
AcoI YGGCCR 4 cut(s) 3, 364, 1259, 2362
AcsI RAATTY 5 cut(s) 799, 911, 1472, 1800, 2161
AcuI CTGAAG 3 cut(s) 276, 2238, 2244
AcyI GRCGYC 1 cut(s) 2555
AdeI CACNNNGTG 1 cut(s) 1655
AfaI GTAC 6 cut(s) 330, 954, 1524, 1696, 1895, 2303
AfiI CCNNNNNNNGG 5 cut(s) 629, 2326, 2327, 2456, 2598
AflIII ACRYGT 1 cut(s) 2908
AjnI CCWGG 5 cut(s) 147, 523, 1467, 2418, 2542
AjuI GAANNNNNNNTTGG 2 cut(s) 1931, 1963
Alw21I GWGCWC 1 cut(s) 147
Alw26I GTCTC 6 cut(s) 116, 157, 181, 730, 2242, 2745
AlwI GGATC 5 cut(s) 257, 1819, 2864, 2870, 2883
AoxI GGCC 6 cut(s) 3, 364, 1259, 2362, 2607, 2810
ApeKI GCWGC 5 cut(s) 1148, 1503, 2367, 2376, 2640
ApoI RAATTY 5 cut(s) 799, 911, 1472, 1800, 2161
ArsI GACNNNNNNTTYG 2 cut(s) 521, 553
AseI ATTAAT 1 cut(s) 1962
Asp700I GAANNNNTTC 2 cut(s) 1800, 2901
AspLEI GCGC 3 cut(s) 1176, 1381, 2319
AspS9I GGNCC 3 cut(s) 61, 2200, 2811
AsuC2I CCSGG 1 cut(s) 2328
AsuHPI GGTGA 9 cut(s) 40, 106, 308, 539, 2075, 2179, 2188, 2813, 2897
AsuII TTCGAA 1 cut(s) 262
AvaII GGWCC 2 cut(s) 61, 2200
AxyI CCTNAGG 1 cut(s) 1763
BaeGI GKGCMC 1 cut(s) 2690
BalI TGGCCA 1 cut(s) 366
BamHI GGATCC 1 cut(s) 2875
Bbv12I GWGCWC 1 cut(s) 147
BbvI GCAGC 5 cut(s) 1135, 1490, 2379, 2388, 2652
BccI CCATC 6 cut(s) 220, 628, 637, 1369, 2060, 2403
BceAI ACGGC 2 cut(s) 2196, 2452
BciT130I CCWGG 5 cut(s) 149, 525, 1469, 2420, 2544
BciVI GTATCC 1 cut(s) 2595
BclI TGATCA 2 cut(s) 898, 2266
BcnI CCSGG 1 cut(s) 2328
BcoDI GTCTC 6 cut(s) 116, 157, 181, 730, 2242, 2745
BfaI CTAG 5 cut(s) 14, 872, 1736, 2019, 2516
BfmI CTRYAG 1 cut(s) 2638
BfuI GTATCC 1 cut(s) 2595
BglI GCCNNNNNGGC 1 cut(s) 502
BisI GCNGC 6 cut(s) 1149, 1504, 2365, 2368, 2377, 2641
BlpI GCTNAGC 1 cut(s) 581
BlsI GCNGC 6 cut(s) 1150, 1505, 2366, 2369, 2378, 2642
BmcAI AGTACT 1 cut(s) 954
Bme1390I CCNGG 6 cut(s) 149, 525, 1469, 2328, 2420, 2544
Bme18I GGWCC 2 cut(s) 61, 2200
BmgT120I GGNCC 3 cut(s) 61, 2200, 2811
BmiI GGNNCC 3 cut(s) 887, 2254, 2877
BmrFI CCNGG 6 cut(s) 149, 525, 1469, 2328, 2420, 2544
BmsI GCATC 7 cut(s) 142, 1443, 1629, 1981, 2005, 2503, 2755
BpmI CTGGAG 1 cut(s) 131
Bpu1102I GCTNAGC 1 cut(s) 581
Bpu14I TTCGAA 1 cut(s) 262
BpuEI CTTGAG 5 cut(s) 50, 778, 1283, 1919, 2425
BpuMI CCSGG 1 cut(s) 2328
BsaBI GATNNNNATC 1 cut(s) 1964
BsaHI GRCGYC 1 cut(s) 2555
BsaI GGTCTC 1 cut(s) 2242
BsaJI CCNNGG 6 cut(s) 292, 523, 2059, 2418, 2419, 2880
BsaWI WCCGGW 1 cut(s) 2249
Bsc4I CCNNNNNNNGG 5 cut(s) 629, 2326, 2327, 2456, 2598
Bse118I RCCGGY 1 cut(s) 2605
Bse1I ACTGG 3 cut(s) 180, 960, 2603
Bse21I CCTNAGG 1 cut(s) 1763
Bse3DI GCAATG 2 cut(s) 833, 2754
Bse8I GATNNNNATC 1 cut(s) 1964
BseBI CCWGG 5 cut(s) 149, 525, 1469, 2420, 2544
BseDI CCNNGG 6 cut(s) 292, 523, 2059, 2418, 2419, 2880
BseJI GATNNNNATC 1 cut(s) 1964
BseLI CCNNNNNNNGG 5 cut(s) 629, 2326, 2327, 2456, 2598
BseMI GCAATG 2 cut(s) 833, 2754
BseMII CTCAG 4 cut(s) 139, 572, 741, 1874
BseNI ACTGG 3 cut(s) 180, 960, 2603
BseRI GAGGAG 2 cut(s) 851, 2819
BseSI GKGCMC 1 cut(s) 2690
BseXI GCAGC 5 cut(s) 1135, 1490, 2379, 2388, 2652
BseYI CCCAGC 1 cut(s) 2643
BsgI GTGCAG 2 cut(s) 1086, 2395
Bsh1236I CGCG 4 cut(s) 393, 967, 1176, 2910
BshFI GGCC 6 cut(s) 5, 366, 1261, 2364, 2609, 2812
BsiHKAI GWGCWC 1 cut(s) 147
BsiSI CCGG 5 cut(s) 1607, 2250, 2327, 2606, 2708
BslFI GGGAC 2 cut(s) 593, 2455
BslI CCNNNNNNNGG 5 cut(s) 629, 2326, 2327, 2456, 2598
BsmAI GTCTC 6 cut(s) 116, 157, 181, 730, 2242, 2745
BsmFI GGGAC 2 cut(s) 593, 2455
BsmI GAATGC 1 cut(s) 2213
BsnI GGCC 6 cut(s) 5, 366, 1261, 2364, 2609, 2812
Bso31I GGTCTC 1 cut(s) 2242
Bsp119I TTCGAA 1 cut(s) 262
Bsp1286I GDGCHC 2 cut(s) 147, 2690
Bsp1407I TGTACA 2 cut(s) 1522, 1893
Bsp1720I GCTNAGC 1 cut(s) 581
Bsp68I TCGCGA 1 cut(s) 393
BspACI CCGC 4 cut(s) 118, 967, 2129, 2365
BspANI GGCC 6 cut(s) 5, 366, 1261, 2364, 2609, 2812
BspCNI CTCAG 4 cut(s) 138, 573, 740, 1875
BspFNI CGCG 4 cut(s) 393, 967, 1176, 2910
BspHI TCATGA 1 cut(s) 1441
BspLI GGNNCC 3 cut(s) 887, 2254, 2877
BspMAI CTGCAG 1 cut(s) 2642
BspPI GGATC 5 cut(s) 257, 1819, 2864, 2870, 2883
BspQI GCTCTTC 1 cut(s) 63
BspT104I TTCGAA 1 cut(s) 262
BspTNI GGTCTC 1 cut(s) 2242
BsrDI GCAATG 2 cut(s) 833, 2754
BsrFI RCCGGY 1 cut(s) 2605
BsrGI TGTACA 2 cut(s) 1522, 1893
BsrI ACTGG 3 cut(s) 180, 960, 2603
BssAI RCCGGY 1 cut(s) 2605
BssECI CCNNGG 6 cut(s) 292, 523, 2059, 2418, 2419, 2880
BssNI GRCGYC 1 cut(s) 2555
BssT1I CCWWGG 2 cut(s) 292, 2880
Bst2UI CCWGG 5 cut(s) 149, 525, 1469, 2420, 2544
Bst4CI ACNGT 5 cut(s) 896, 988, 1064, 1752, 2063
Bst6I CTCTTC 3 cut(s) 63, 1230, 2245
BstACI GRCGYC 1 cut(s) 2555
BstAPI GCANNNNNTGC 2 cut(s) 2373, 2765
BstAUI TGTACA 2 cut(s) 1522, 1893
BstBI TTCGAA 1 cut(s) 262
BstC8I GCNNGC 2 cut(s) 498, 1069
BstDEI CTNAG 9 cut(s) 52, 125, 569, 581, 727, 1271, 1763, 1782, 1883
BstDSI CCRYGG 1 cut(s) 2059
BstENI CCTNNNNNAGG 2 cut(s) 627, 2454
BstFNI CGCG 4 cut(s) 393, 967, 1176, 2910
BstHHI GCGC 3 cut(s) 1176, 1381, 2319
BstMAI GTCTC 6 cut(s) 116, 157, 181, 730, 2242, 2745
BstNI CCWGG 5 cut(s) 149, 525, 1469, 2420, 2544
BstNSI RCATGY 1 cut(s) 1174
BstSCI CCNGG 6 cut(s) 147, 523, 1467, 2326, 2418, 2542
BstSFI CTRYAG 1 cut(s) 2638
BstSLI GKGCMC 1 cut(s) 2690
BstUI CGCG 4 cut(s) 393, 967, 1176, 2910
BstV1I GCAGC 5 cut(s) 1135, 1490, 2379, 2388, 2652
BstX2I RGATCY 2 cut(s) 2856, 2875
BstXI CCANNNNNNTGG 1 cut(s) 2066
BstYI RGATCY 2 cut(s) 2856, 2875
Bsu36I CCTNAGG 1 cut(s) 1763
BsuI GTATCC 1 cut(s) 2595
BsuRI GGCC 6 cut(s) 5, 366, 1261, 2364, 2609, 2812
BtgI CCRYGG 1 cut(s) 2059
BtsIMutI CAGTG 3 cut(s) 187, 252, 1069
BtuMI TCGCGA 1 cut(s) 393
Cac8I GCNNGC 2 cut(s) 498, 1069
CciI TCATGA 1 cut(s) 1441
CfoI GCGC 3 cut(s) 1176, 1381, 2319
Cfr10I RCCGGY 1 cut(s) 2605
Cfr13I GGNCC 3 cut(s) 61, 2200, 2811
Csp6I GTAC 6 cut(s) 329, 953, 1523, 1695, 1894, 2302
CviAII CATG 5 cut(s) 1171, 1280, 1442, 1514, 1526
CviQI GTAC 6 cut(s) 329, 953, 1523, 1695, 1894, 2302
DdeI CTNAG 9 cut(s) 52, 125, 569, 581, 727, 1271, 1763, 1782, 1883
DraI TTTAAA 2 cut(s) 1212, 1863
DraIII CACNNNGTG 1 cut(s) 1655
EaeI YGGCCR 4 cut(s) 3, 364, 1259, 2362
Eam1104I CTCTTC 3 cut(s) 63, 1230, 2245
EarI CTCTTC 3 cut(s) 63, 1230, 2245
Eco130I CCWWGG 2 cut(s) 292, 2880
Eco31I GGTCTC 1 cut(s) 2242
Eco32I GATATC 1 cut(s) 2820
Eco47I GGWCC 2 cut(s) 61, 2200
Eco57I CTGAAG 3 cut(s) 276, 2238, 2244
Eco81I CCTNAGG 1 cut(s) 1763
EcoNI CCTNNNNNAGG 2 cut(s) 627, 2454
EcoRI GAATTC 1 cut(s) 799
EcoRII CCWGG 5 cut(s) 147, 523, 1467, 2418, 2542
EcoRV GATATC 1 cut(s) 2820
EcoT14I CCWWGG 2 cut(s) 292, 2880
EcoT22I ATGCAT 1 cut(s) 1515
ErhI CCWWGG 2 cut(s) 292, 2880
FaeI CATG 5 cut(s) 1174, 1283, 1445, 1517, 1529
FalI AAGNNNNNCTT 8 cut(s) 317, 349, 418, 450, 1545, 1577, 2097, 2129
FaqI GGGAC 2 cut(s) 593, 2455
FatI CATG 5 cut(s) 1170, 1279, 1441, 1513, 1525
FauI CCCGC 2 cut(s) 125, 2122
FbaI TGATCA 2 cut(s) 898, 2266
FblI GTMKAC 2 cut(s) 672, 2784
Fnu4HI GCNGC 6 cut(s) 1149, 1504, 2365, 2368, 2377, 2641
Fsp4HI GCNGC 6 cut(s) 1149, 1504, 2365, 2368, 2377, 2641
FspBI CTAG 5 cut(s) 14, 872, 1736, 2019, 2516
GlaI GCGC 3 cut(s) 1175, 1380, 2318
GluI GCNGC 6 cut(s) 1149, 1504, 2365, 2368, 2377, 2641
GsaI CCCAGC 1 cut(s) 2647
GsuI CTGGAG 1 cut(s) 131
HaeIII GGCC 6 cut(s) 5, 366, 1261, 2364, 2609, 2812
HapII CCGG 5 cut(s) 1607, 2250, 2327, 2606, 2708
HhaI GCGC 3 cut(s) 1176, 1381, 2319
Hin1I GRCGYC 1 cut(s) 2555
Hin1II CATG 5 cut(s) 1174, 1283, 1445, 1517, 1529
Hin6I GCGC 3 cut(s) 1174, 1379, 2317
HinP1I GCGC 3 cut(s) 1174, 1379, 2317
HincII GTYRAC 1 cut(s) 19
HindII GTYRAC 1 cut(s) 19
HindIII AAGCTT 1 cut(s) 457
HinfI GANTC 9 cut(s) 76, 176, 189, 1712, 1724, 2147, 2179, 2336, 2485
HpaI GTTAAC 1 cut(s) 19
HpaII CCGG 5 cut(s) 1607, 2250, 2327, 2606, 2708
HphI GGTGA 9 cut(s) 40, 106, 308, 539, 2075, 2179, 2188, 2813, 2897
Hpy166II GTNNAC 7 cut(s) 19, 673, 1112, 1658, 1685, 2059, 2785
Hpy188I TCNGA 4 cut(s) 128, 730, 2152, 2840
Hpy188III TCNNGA 9 cut(s) 392, 545, 596, 748, 1442, 1841, 1936, 2033, 2507
Hpy8I GTNNAC 7 cut(s) 19, 673, 1112, 1658, 1685, 2059, 2785
Hpy99I CGWCG 2 cut(s) 393, 2557
HpyCH4III ACNGT 5 cut(s) 896, 988, 1064, 1752, 2063
HpyCH4IV ACGT 3 cut(s) 21, 536, 2555
HpyF3I CTNAG 9 cut(s) 52, 125, 569, 581, 727, 1271, 1763, 1782, 1883
HpySE526I ACGT 3 cut(s) 21, 536, 2555
Hsp92I GRCGYC 1 cut(s) 2555
Hsp92II CATG 5 cut(s) 1174, 1283, 1445, 1517, 1529
HspAI GCGC 3 cut(s) 1174, 1379, 2317
Ksp22I TGATCA 2 cut(s) 898, 2266
KspAI GTTAAC 1 cut(s) 19
LguI GCTCTTC 1 cut(s) 63
LmnI GCTCC 1 cut(s) 150
Lsp1109I GCAGC 5 cut(s) 1135, 1490, 2379, 2388, 2652
LweI GCATC 7 cut(s) 142, 1443, 1629, 1981, 2005, 2503, 2755
MaeI CTAG 5 cut(s) 14, 872, 1736, 2019, 2516
MaeII ACGT 3 cut(s) 21, 536, 2555
MaeIII GTNAC 8 cut(s) 169, 527, 958, 1274, 1647, 1787, 2885, 2911
MfeI CAATTG 3 cut(s) 1678, 1719, 2434
MflI RGATCY 2 cut(s) 2856, 2875
MhlI GDGCHC 2 cut(s) 147, 2690
MlsI TGGCCA 1 cut(s) 366
MluI ACGCGT 1 cut(s) 2908
MluNI TGGCCA 1 cut(s) 366
MlyI GAGTC 3 cut(s) 183, 185, 2156
MmeI TCCRAC 1 cut(s) 219
Mox20I TGGCCA 1 cut(s) 366
Mph1103I ATGCAT 1 cut(s) 1515
MroXI GAANNNNTTC 2 cut(s) 1800, 2901
MscI TGGCCA 1 cut(s) 366
MslI CAYNNNNRTG 2 cut(s) 1977, 2064
Msp20I TGGCCA 1 cut(s) 366
MspA1I CMGCKG 2 cut(s) 2643, 2919
MspI CCGG 5 cut(s) 1607, 2250, 2327, 2606, 2708
MspR9I CCNGG 6 cut(s) 149, 525, 1469, 2328, 2420, 2544
MunI CAATTG 3 cut(s) 1678, 1719, 2434
Mva1269I GAATGC 1 cut(s) 2213
MvaI CCWGG 5 cut(s) 149, 525, 1469, 2420, 2544
MvnI CGCG 4 cut(s) 393, 967, 1176, 2910
NciI CCSGG 1 cut(s) 2328
NlaIII CATG 5 cut(s) 1174, 1283, 1445, 1517, 1529
NlaIV GGNNCC 3 cut(s) 887, 2254, 2877
NmuCI GTSAC 5 cut(s) 169, 527, 958, 1647, 2885
NruI TCGCGA 1 cut(s) 393
NsiI ATGCAT 1 cut(s) 1515
NspI RCATGY 1 cut(s) 1174
NspV TTCGAA 1 cut(s) 262
PagI TCATGA 1 cut(s) 1441
PasI CCCWGGG 1 cut(s) 2419
PciSI GCTCTTC 1 cut(s) 63
PcsI WCGNNNNNNNCGW 1 cut(s) 2067
PctI GAATGC 1 cut(s) 2213
PdmI GAANNNNTTC 2 cut(s) 1800, 2901
PfeI GAWTC 6 cut(s) 76, 1712, 1724, 2179, 2336, 2485
PflFI GACNNNGTC 2 cut(s) 59, 175
PfoI TCCNGGA 2 cut(s) 147, 1467
PkrI GCNGC 6 cut(s) 1150, 1505, 2366, 2369, 2378, 2642
PleI GAGTC 3 cut(s) 183, 184, 2155
PpsI GAGTC 3 cut(s) 183, 184, 2155
PshBI ATTAAT 1 cut(s) 1962
Psp1406I AACGTT 2 cut(s) 21, 536
Psp6I CCWGG 5 cut(s) 147, 523, 1467, 2418, 2542
PspFI CCCAGC 1 cut(s) 2643
PspGI CCWGG 5 cut(s) 147, 523, 1467, 2418, 2542
PspN4I GGNNCC 3 cut(s) 887, 2254, 2877
PspPI GGNCC 3 cut(s) 61, 2200, 2811
PstI CTGCAG 1 cut(s) 2642
PsuI RGATCY 2 cut(s) 2856, 2875
PsyI GACNNNGTC 2 cut(s) 59, 175
PvuII CAGCTG 2 cut(s) 2643, 2919
RruI TCGCGA 1 cut(s) 393
RsaI GTAC 6 cut(s) 330, 954, 1524, 1696, 1895, 2303
RsaNI GTAC 6 cut(s) 329, 953, 1523, 1695, 1894, 2302
RseI CAYNNNNRTG 2 cut(s) 1977, 2064
SapI GCTCTTC 1 cut(s) 63
SatI GCNGC 6 cut(s) 1149, 1504, 2365, 2368, 2377, 2641
Sau96I GGNCC 3 cut(s) 61, 2200, 2811
ScaI AGTACT 1 cut(s) 954
SchI GAGTC 3 cut(s) 183, 185, 2156
ScrFI CCNGG 6 cut(s) 149, 525, 1469, 2328, 2420, 2544
SduI GDGCHC 2 cut(s) 147, 2690
SfaNI GCATC 7 cut(s) 142, 1443, 1629, 1981, 2005, 2503, 2755
SfcI CTRYAG 1 cut(s) 2638
SfuI TTCGAA 1 cut(s) 262
SinI GGWCC 2 cut(s) 61, 2200
SmiMI CAYNNNNRTG 2 cut(s) 1977, 2064
SmlI CTYRAG 5 cut(s) 29, 793, 1298, 1934, 2404
SmoI CTYRAG 5 cut(s) 29, 793, 1298, 1934, 2404
SsiI CCGC 4 cut(s) 118, 967, 2129, 2365
SspI AATATT 1 cut(s) 1541
SspMI CTAG 5 cut(s) 14, 872, 1736, 2019, 2516
StyD4I CCNGG 6 cut(s) 147, 523, 1467, 2326, 2418, 2542
StyI CCWWGG 2 cut(s) 292, 2880
TaaI ACNGT 5 cut(s) 896, 988, 1064, 1752, 2063
TaiI ACGT 3 cut(s) 24, 539, 2558
TaqI TCGA 3 cut(s) 262, 544, 1242
TatI WGTACW 3 cut(s) 952, 1522, 1893
TauI GCSGC 1 cut(s) 2367
TfiI GAWTC 6 cut(s) 76, 1712, 1724, 2179, 2336, 2485
TscAI CASTG 3 cut(s) 187, 259, 1069
TseFI GTSAC 5 cut(s) 169, 527, 958, 1647, 2885
TseI GCWGC 5 cut(s) 1148, 1503, 2367, 2376, 2640
Tsp45I GTSAC 5 cut(s) 169, 527, 958, 1647, 2885
TspGWI ACGGA 2 cut(s) 917, 2749
TspRI CASTG 3 cut(s) 187, 259, 1069
Tth111I GACNNNGTC 2 cut(s) 59, 175
VpaK11BI GGWCC 2 cut(s) 61, 2200
VspI ATTAAT 1 cut(s) 1962
XagI CCTNNNNNAGG 2 cut(s) 627, 2454
XapI RAATTY 5 cut(s) 799, 911, 1472, 1800, 2161
XceI RCATGY 1 cut(s) 1174
XmiI GTMKAC 2 cut(s) 672, 2784
XmnI GAANNNNTTC 2 cut(s) 1800, 2901
XspI CTAG 5 cut(s) 14, 872, 1736, 2019, 2516
ZraI GACGTC 1 cut(s) 2556
ZrmI AGTACT 1 cut(s) 954
Zsp2I ATGCAT 1 cut(s) 1515
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.