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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G17972 |
| fragaria_vesca | FvH4_1g11940 |
| malus_domestica | MD02G1133200.v1.1 |
| prunus_persica | Prupe.7G167500_v2.0.a1 |
| pyrus_communis | pycom02g10470 |
| rosa_laevigata | RLG00000016890 |
| rosa_multiflora | Rmu_sc0002542.1_g000019 |
| rosa_roxburghii | Rroxscaffold_2G00142990 |
| rosa_rugosa | Rorug02G0080500 |
| rosa_samantha | Rh2AG130400 Rh2BG133500 Rh2CG134000 Rh2DG134300 |
| rosa_wichuraiana | Rw2G010060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 3 cut(s) | 733, 1826, 2722 |
| Acc36I | ACCTGC | 1 cut(s) | 2422 |
| AccB1I | GGYRCC | 6 cut(s) | 793, 817, 1499, 1677, 2183, 2395 |
| AccI | GTMKAC | 2 cut(s) | 67, 1279 |
| AccII | CGCG | 1 cut(s) | 686 |
| AccIII | TCCGGA | 1 cut(s) | 160 |
| AciI | CCGC | 5 cut(s) | 617, 1374, 1503, 1657, 1942 |
| AclWI | GGATC | 1 cut(s) | 1328 |
| AcsI | RAATTY | 7 cut(s) | 108, 630, 933, 1118, 1184, 1700, 1993 |
| AcuI | CTGAAG | 6 cut(s) | 337, 795, 843, 1500, 2595, 2607 |
| AfaI | GTAC | 4 cut(s) | 97, 156, 1411, 2824 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1941, 2172, 2193 |
| AflIII | ACRYGT | 1 cut(s) | 129 |
| AgeI | ACCGGT | 2 cut(s) | 286, 2263 |
| AjiI | CACGTC | 2 cut(s) | 130, 2653 |
| AjnI | CCWGG | 4 cut(s) | 1282, 1293, 1952, 2639 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 218, 250, 390, 422, 2111, 2143 |
| Alw21I | GWGCWC | 2 cut(s) | 168, 1158 |
| Alw26I | GTCTC | 4 cut(s) | 719, 1935, 2366, 2753 |
| AlwI | GGATC | 1 cut(s) | 1328 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2375 |
| Aor13HI | TCCGGA | 1 cut(s) | 160 |
| AoxI | GGCC | 1 cut(s) | 2163 |
| ApeKI | GCWGC | 6 cut(s) | 136, 272, 1907, 2429, 2590, 2693 |
| ApoI | RAATTY | 7 cut(s) | 108, 630, 933, 1118, 1184, 1700, 1993 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1772, 1804 |
| AseI | ATTAAT | 1 cut(s) | 414 |
| AsiGI | ACCGGT | 2 cut(s) | 286, 2263 |
| AspLEI | GCGC | 1 cut(s) | 686 |
| AspS9I | GGNCC | 3 cut(s) | 437, 596, 2164 |
| AsuHPI | GGTGA | 8 cut(s) | 53, 631, 638, 1700, 1865, 2304, 2339, 2546 |
| AsuII | TTCGAA | 2 cut(s) | 106, 396 |
| AsuNHI | GCTAGC | 1 cut(s) | 1910 |
| AvaII | GGWCC | 2 cut(s) | 437, 596 |
| AxyI | CCTNAGG | 1 cut(s) | 441 |
| BanI | GGYRCC | 6 cut(s) | 793, 817, 1499, 1677, 2183, 2395 |
| BanII | GRGCYC | 2 cut(s) | 12, 168 |
| BbsI | GAAGAC | 2 cut(s) | 683, 729 |
| Bbv12I | GWGCWC | 2 cut(s) | 168, 1158 |
| BbvI | GCAGC | 6 cut(s) | 148, 284, 1894, 2441, 2577, 2705 |
| BccI | CCATC | 9 cut(s) | 302, 382, 448, 1001, 1040, 1045, 2224, 2312, 2352 |
| BciT130I | CCWGG | 4 cut(s) | 1284, 1295, 1954, 2641 |
| BciVI | GTATCC | 1 cut(s) | 1821 |
| BclI | TGATCA | 1 cut(s) | 1792 |
| BcoDI | GTCTC | 4 cut(s) | 719, 1935, 2366, 2753 |
| BfaI | CTAG | 8 cut(s) | 681, 879, 1236, 1343, 1598, 1911, 2139, 2472 |
| BfmI | CTRYAG | 3 cut(s) | 588, 1644, 2112 |
| BfuAI | ACCTGC | 1 cut(s) | 2422 |
| BfuI | GTATCC | 1 cut(s) | 1821 |
| BisI | GCNGC | 8 cut(s) | 137, 273, 1503, 1657, 1908, 2430, 2591, 2694 |
| BlsI | GCNGC | 8 cut(s) | 138, 274, 1504, 1658, 1909, 2431, 2592, 2695 |
| Bme1390I | CCNGG | 4 cut(s) | 1284, 1295, 1954, 2641 |
| Bme18I | GGWCC | 2 cut(s) | 437, 596 |
| BmgBI | CACGTC | 2 cut(s) | 130, 2653 |
| BmgT120I | GGNCC | 3 cut(s) | 437, 596, 2164 |
| BmrFI | CCNGG | 4 cut(s) | 1284, 1295, 1954, 2641 |
| BmsI | GCATC | 6 cut(s) | 1433, 1483, 1854, 2193, 2645, 2668 |
| BmtI | GCTAGC | 1 cut(s) | 1914 |
| BpiI | GAAGAC | 2 cut(s) | 683, 729 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1233, 1265 |
| BpmI | CTGGAG | 2 cut(s) | 485, 1305 |
| Bpu14I | TTCGAA | 2 cut(s) | 106, 396 |
| BpuEI | CTTGAG | 2 cut(s) | 62, 2554 |
| BsaI | GGTCTC | 1 cut(s) | 2753 |
| BsaJI | CCNNGG | 4 cut(s) | 33, 1294, 1887, 2423 |
| BsaWI | WCCGGW | 5 cut(s) | 160, 286, 598, 971, 2263 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1941, 2172, 2193 |
| Bse118I | RCCGGY | 2 cut(s) | 286, 2263 |
| Bse1I | ACTGG | 4 cut(s) | 468, 1759, 2185, 2325 |
| Bse21I | CCTNAGG | 1 cut(s) | 441 |
| Bse3DI | GCAATG | 3 cut(s) | 726, 871, 2003 |
| BseAI | TCCGGA | 1 cut(s) | 160 |
| BseBI | CCWGG | 4 cut(s) | 1284, 1295, 1954, 2641 |
| BseDI | CCNNGG | 4 cut(s) | 33, 1294, 1887, 2423 |
| BseGI | GGATG | 7 cut(s) | 463, 1056, 1060, 1498, 1525, 1783, 2636 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1941, 2172, 2193 |
| BseMI | GCAATG | 3 cut(s) | 726, 871, 2003 |
| BseMII | CTCAG | 4 cut(s) | 156, 432, 539, 1264 |
| BseNI | ACTGG | 4 cut(s) | 468, 1759, 2185, 2325 |
| BseRI | GAGGAG | 4 cut(s) | 20, 48, 386, 1254 |
| BseXI | GCAGC | 6 cut(s) | 148, 284, 1894, 2441, 2577, 2705 |
| BseYI | CCCAGC | 1 cut(s) | 2192 |
| BsgI | GTGCAG | 3 cut(s) | 768, 1944, 2400 |
| Bsh1236I | CGCG | 1 cut(s) | 686 |
| BshFI | GGCC | 1 cut(s) | 2165 |
| BshNI | GGYRCC | 6 cut(s) | 793, 817, 1499, 1677, 2183, 2395 |
| BshTI | ACCGGT | 2 cut(s) | 286, 2263 |
| BsiHKAI | GWGCWC | 2 cut(s) | 168, 1158 |
| BsiSI | CCGG | 5 cut(s) | 161, 287, 599, 972, 2264 |
| BslFI | GGGAC | 4 cut(s) | 396, 975, 1965, 2035 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1941, 2172, 2193 |
| BsmAI | GTCTC | 4 cut(s) | 719, 1935, 2366, 2753 |
| BsmFI | GGGAC | 4 cut(s) | 396, 975, 1965, 2035 |
| BsmI | GAATGC | 2 cut(s) | 662, 1621 |
| BsnI | GGCC | 1 cut(s) | 2165 |
| Bso31I | GGTCTC | 1 cut(s) | 2753 |
| Bsp119I | TTCGAA | 2 cut(s) | 106, 396 |
| Bsp1286I | GDGCHC | 3 cut(s) | 12, 168, 1158 |
| Bsp13I | TCCGGA | 1 cut(s) | 160 |
| Bsp143I | GATC | 5 cut(s) | 610, 1061, 1333, 1792, 1855 |
| BspACI | CCGC | 5 cut(s) | 617, 1374, 1503, 1657, 1942 |
| BspANI | GGCC | 1 cut(s) | 2165 |
| BspCNI | CTCAG | 4 cut(s) | 155, 433, 540, 1263 |
| BspEI | TCCGGA | 1 cut(s) | 160 |
| BspFNI | CGCG | 1 cut(s) | 686 |
| BspMI | ACCTGC | 1 cut(s) | 2422 |
| BspOI | GCTAGC | 1 cut(s) | 1914 |
| BspPI | GGATC | 1 cut(s) | 1328 |
| BspT104I | TTCGAA | 2 cut(s) | 106, 396 |
| BspT107I | GGYRCC | 6 cut(s) | 793, 817, 1499, 1677, 2183, 2395 |
| BspTNI | GGTCTC | 1 cut(s) | 2753 |
| BsrDI | GCAATG | 3 cut(s) | 726, 871, 2003 |
| BsrFI | RCCGGY | 2 cut(s) | 286, 2263 |
| BsrI | ACTGG | 4 cut(s) | 468, 1759, 2185, 2325 |
| BssAI | RCCGGY | 2 cut(s) | 286, 2263 |
| BssECI | CCNNGG | 4 cut(s) | 33, 1294, 1887, 2423 |
| BssMI | GATC | 5 cut(s) | 610, 1061, 1333, 1792, 1855 |
| BssT1I | CCWWGG | 2 cut(s) | 1887, 2423 |
| Bst2UI | CCWGG | 4 cut(s) | 1284, 1295, 1954, 2641 |
| Bst6I | CTCTTC | 1 cut(s) | 1014 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1907 |
| BstBI | TTCGAA | 2 cut(s) | 106, 396 |
| BstC8I | GCNNGC | 2 cut(s) | 1578, 1912 |
| BstDEI | CTNAG | 6 cut(s) | 142, 441, 548, 1250, 1266, 1806 |
| BstF5I | GGATG | 7 cut(s) | 463, 1056, 1060, 1498, 1525, 1783, 2636 |
| BstFNI | CGCG | 1 cut(s) | 686 |
| BstHHI | GCGC | 1 cut(s) | 686 |
| BstKTI | GATC | 5 cut(s) | 613, 1064, 1336, 1795, 1858 |
| BstMAI | GTCTC | 4 cut(s) | 719, 1935, 2366, 2753 |
| BstMBI | GATC | 5 cut(s) | 610, 1061, 1333, 1792, 1855 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 81, 614, 1502, 1618, 1764, 1907, 2462, 2693 |
| BstNI | CCWGG | 4 cut(s) | 1284, 1295, 1954, 2641 |
| BstSCI | CCNGG | 4 cut(s) | 1282, 1293, 1952, 2639 |
| BstSFI | CTRYAG | 3 cut(s) | 588, 1644, 2112 |
| BstUI | CGCG | 1 cut(s) | 686 |
| BstV1I | GCAGC | 6 cut(s) | 148, 284, 1894, 2441, 2577, 2705 |
| BstV2I | GAAGAC | 2 cut(s) | 683, 729 |
| Bsu36I | CCTNAGG | 1 cut(s) | 441 |
| BsuI | GTATCC | 1 cut(s) | 1821 |
| BsuRI | GGCC | 1 cut(s) | 2165 |
| BtgZI | GCGATG | 2 cut(s) | 276, 1410 |
| BtrI | CACGTC | 2 cut(s) | 130, 2653 |
| BtsCI | GGATG | 7 cut(s) | 463, 1056, 1060, 1498, 1525, 1783, 2636 |
| BtsI | GCAGTG | 1 cut(s) | 118 |
| BtsIMutI | CAGTG | 4 cut(s) | 118, 361, 1722, 2332 |
| BveI | ACCTGC | 1 cut(s) | 2422 |
| Cac8I | GCNNGC | 2 cut(s) | 1578, 1912 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2375 |
| CfoI | GCGC | 1 cut(s) | 686 |
| Cfr10I | RCCGGY | 2 cut(s) | 286, 2263 |
| Cfr13I | GGNCC | 3 cut(s) | 437, 596, 2164 |
| CpoI | CGGWCCG | 1 cut(s) | 596 |
| CseI | GACGC | 1 cut(s) | 2298 |
| Csp6I | GTAC | 4 cut(s) | 96, 155, 1410, 2823 |
| CspAI | ACCGGT | 2 cut(s) | 286, 2263 |
| CspI | CGGWCCG | 1 cut(s) | 596 |
| CviAII | CATG | 8 cut(s) | 929, 1082, 1430, 1682, 1709, 1764, 1768, 2000 |
| CviQI | GTAC | 4 cut(s) | 96, 155, 1410, 2823 |
| DdeI | CTNAG | 6 cut(s) | 142, 441, 548, 1250, 1266, 1806 |
| DpnI | GATC | 5 cut(s) | 612, 1063, 1335, 1794, 1857 |
| DpnII | GATC | 5 cut(s) | 610, 1061, 1333, 1792, 1855 |
| DraI | TTTAAA | 1 cut(s) | 2647 |
| DrdI | GACNNNNNNGTC | 3 cut(s) | 733, 1826, 2722 |
| DseDI | GACNNNNNNGTC | 3 cut(s) | 733, 1826, 2722 |
| Eam1104I | CTCTTC | 1 cut(s) | 1014 |
| EarI | CTCTTC | 1 cut(s) | 1014 |
| Ecl136II | GAGCTC | 1 cut(s) | 166 |
| Eco130I | CCWWGG | 2 cut(s) | 1887, 2423 |
| Eco24I | GRGCYC | 2 cut(s) | 12, 168 |
| Eco31I | GGTCTC | 1 cut(s) | 2753 |
| Eco47I | GGWCC | 2 cut(s) | 437, 596 |
| Eco53kI | GAGCTC | 1 cut(s) | 166 |
| Eco57I | CTGAAG | 6 cut(s) | 337, 795, 843, 1500, 2595, 2607 |
| Eco81I | CCTNAGG | 1 cut(s) | 441 |
| EcoICRI | GAGCTC | 1 cut(s) | 166 |
| EcoRI | GAATTC | 2 cut(s) | 108, 1993 |
| EcoRII | CCWGG | 4 cut(s) | 1282, 1293, 1952, 2639 |
| EcoT14I | CCWWGG | 2 cut(s) | 1887, 2423 |
| EcoT22I | ATGCAT | 2 cut(s) | 1769, 2005 |
| EcoT38I | GRGCYC | 2 cut(s) | 12, 168 |
| ErhI | CCWWGG | 2 cut(s) | 1887, 2423 |
| FaeI | CATG | 8 cut(s) | 932, 1085, 1433, 1685, 1712, 1767, 1771, 2003 |
| FaqI | GGGAC | 4 cut(s) | 396, 975, 1965, 2035 |
| FatI | CATG | 8 cut(s) | 928, 1081, 1429, 1681, 1708, 1763, 1767, 1999 |
| FauI | CCCGC | 1 cut(s) | 1935 |
| FauNDI | CATATG | 1 cut(s) | 999 |
| FbaI | TGATCA | 1 cut(s) | 1792 |
| FblI | GTMKAC | 2 cut(s) | 67, 1279 |
| Fnu4HI | GCNGC | 8 cut(s) | 137, 273, 1503, 1657, 1908, 2430, 2591, 2694 |
| FokI | GGATG | 7 cut(s) | 470, 1063, 1067, 1505, 1512, 1790, 2623 |
| FriOI | GRGCYC | 2 cut(s) | 12, 168 |
| Fsp4HI | GCNGC | 8 cut(s) | 137, 273, 1503, 1657, 1908, 2430, 2591, 2694 |
| FspBI | CTAG | 8 cut(s) | 681, 879, 1236, 1343, 1598, 1911, 2139, 2472 |
| GlaI | GCGC | 1 cut(s) | 685 |
| GluI | GCNGC | 8 cut(s) | 137, 273, 1503, 1657, 1908, 2430, 2591, 2694 |
| GsaI | CCCAGC | 1 cut(s) | 2196 |
| GsuI | CTGGAG | 2 cut(s) | 485, 1305 |
| HaeIII | GGCC | 1 cut(s) | 2165 |
| HapII | CCGG | 5 cut(s) | 161, 287, 599, 972, 2264 |
| HgaI | GACGC | 1 cut(s) | 2298 |
| HhaI | GCGC | 1 cut(s) | 686 |
| Hin1II | CATG | 8 cut(s) | 932, 1085, 1433, 1685, 1712, 1767, 1771, 2003 |
| Hin6I | GCGC | 1 cut(s) | 684 |
| HinP1I | GCGC | 1 cut(s) | 684 |
| HincII | GTYRAC | 1 cut(s) | 68 |
| HindII | GTYRAC | 1 cut(s) | 68 |
| HindIII | AAGCTT | 2 cut(s) | 1404, 2784 |
| HpaII | CCGG | 5 cut(s) | 161, 287, 599, 972, 2264 |
| HphI | GGTGA | 8 cut(s) | 53, 631, 638, 1700, 1865, 2304, 2339, 2546 |
| Hpy166II | GTNNAC | 4 cut(s) | 68, 320, 1280, 2811 |
| Hpy188III | TCNNGA | 5 cut(s) | 79, 161, 173, 440, 1400 |
| Hpy8I | GTNNAC | 4 cut(s) | 68, 320, 1280, 2811 |
| Hpy99I | CGWCG | 3 cut(s) | 69, 72, 131 |
| HpyAV | CCTTC | 9 cut(s) | 209, 356, 635, 914, 1539, 1549, 1668, 1889, 2607 |
| HpyCH4IV | ACGT | 4 cut(s) | 129, 404, 565, 2652 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 81, 614, 1502, 1618, 1764, 1907, 2462, 2693 |
| HpyF3I | CTNAG | 6 cut(s) | 142, 441, 548, 1250, 1266, 1806 |
| HpySE526I | ACGT | 4 cut(s) | 129, 404, 565, 2652 |
| Hsp92II | CATG | 8 cut(s) | 932, 1085, 1433, 1685, 1712, 1767, 1771, 2003 |
| HspAI | GCGC | 1 cut(s) | 684 |
| Kpn2I | TCCGGA | 1 cut(s) | 160 |
| Ksp22I | TGATCA | 1 cut(s) | 1792 |
| Kzo9I | GATC | 5 cut(s) | 610, 1061, 1333, 1792, 1855 |
| LmnI | GCTCC | 6 cut(s) | 7, 163, 466, 502, 1844, 2461 |
| Lsp1109I | GCAGC | 6 cut(s) | 148, 284, 1894, 2441, 2577, 2705 |
| LweI | GCATC | 6 cut(s) | 1433, 1483, 1854, 2193, 2645, 2668 |
| MaeI | CTAG | 8 cut(s) | 681, 879, 1236, 1343, 1598, 1911, 2139, 2472 |
| MaeII | ACGT | 4 cut(s) | 129, 404, 565, 2652 |
| MaeIII | GTNAC | 8 cut(s) | 551, 897, 1688, 1817, 2269, 2310, 2516, 2667 |
| MalI | GATC | 5 cut(s) | 612, 1063, 1335, 1794, 1857 |
| MboI | GATC | 5 cut(s) | 610, 1061, 1333, 1792, 1855 |
| MfeI | CAATTG | 3 cut(s) | 1173, 2682, 2727 |
| MhlI | GDGCHC | 3 cut(s) | 12, 168, 1158 |
| MlyI | GAGTC | 4 cut(s) | 566, 2017, 2056, 2166 |
| MmeI | TCCRAC | 3 cut(s) | 574, 669, 733 |
| Mph1103I | ATGCAT | 2 cut(s) | 1769, 2005 |
| MroI | TCCGGA | 1 cut(s) | 160 |
| MseI | TTAA | 9 cut(s) | 414, 477, 1113, 1605, 1724, 2388, 2495, 2646, 2790 |
| MslI | CAYNNNNRTG | 4 cut(s) | 854, 1002, 1686, 2532 |
| MspI | CCGG | 5 cut(s) | 161, 287, 599, 972, 2264 |
| MspR9I | CCNGG | 4 cut(s) | 1284, 1295, 1954, 2641 |
| MunI | CAATTG | 3 cut(s) | 1173, 2682, 2727 |
| Mva1269I | GAATGC | 2 cut(s) | 662, 1621 |
| MvaI | CCWGG | 4 cut(s) | 1284, 1295, 1954, 2641 |
| MvnI | CGCG | 1 cut(s) | 686 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 81, 614, 1502, 1618, 1764, 1907, 2462, 2693 |
| NdeI | CATATG | 1 cut(s) | 999 |
| NdeII | GATC | 5 cut(s) | 610, 1061, 1333, 1792, 1855 |
| NheI | GCTAGC | 1 cut(s) | 1910 |
| NlaIII | CATG | 8 cut(s) | 932, 1085, 1433, 1685, 1712, 1767, 1771, 2003 |
| NmuCI | GTSAC | 6 cut(s) | 897, 1688, 1817, 2269, 2310, 2667 |
| NsiI | ATGCAT | 2 cut(s) | 1769, 2005 |
| NspV | TTCGAA | 2 cut(s) | 106, 396 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1573 |
| PctI | GAATGC | 2 cut(s) | 662, 1621 |
| PfeI | GAWTC | 6 cut(s) | 266, 755, 1356, 1879, 2705, 2719 |
| PflFI | GACNNNGTC | 1 cut(s) | 1223 |
| PinAI | ACCGGT | 2 cut(s) | 286, 2263 |
| PkrI | GCNGC | 8 cut(s) | 138, 274, 1504, 1658, 1909, 2431, 2592, 2695 |
| PleI | GAGTC | 4 cut(s) | 566, 2017, 2056, 2165 |
| PpsI | GAGTC | 4 cut(s) | 566, 2017, 2056, 2165 |
| PshBI | ATTAAT | 1 cut(s) | 414 |
| Psp124BI | GAGCTC | 1 cut(s) | 168 |
| Psp6I | CCWGG | 4 cut(s) | 1282, 1293, 1952, 2639 |
| PspFI | CCCAGC | 1 cut(s) | 2192 |
| PspGI | CCWGG | 4 cut(s) | 1282, 1293, 1952, 2639 |
| PspPI | GGNCC | 3 cut(s) | 437, 596, 2164 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2375 |
| PsyI | GACNNNGTC | 1 cut(s) | 1223 |
| RsaI | GTAC | 4 cut(s) | 97, 156, 1411, 2824 |
| RsaNI | GTAC | 4 cut(s) | 96, 155, 1410, 2823 |
| RseI | CAYNNNNRTG | 4 cut(s) | 854, 1002, 1686, 2532 |
| Rsr2I | CGGWCCG | 1 cut(s) | 596 |
| RsrII | CGGWCCG | 1 cut(s) | 596 |
| SacI | GAGCTC | 1 cut(s) | 168 |
| SalI | GTCGAC | 1 cut(s) | 66 |
| SaqAI | TTAA | 9 cut(s) | 414, 477, 1113, 1605, 1724, 2388, 2495, 2646, 2790 |
| SatI | GCNGC | 8 cut(s) | 137, 273, 1503, 1657, 1908, 2430, 2591, 2694 |
| Sau3AI | GATC | 5 cut(s) | 610, 1061, 1333, 1792, 1855 |
| Sau96I | GGNCC | 3 cut(s) | 437, 596, 2164 |
| SchI | GAGTC | 4 cut(s) | 566, 2017, 2056, 2166 |
| ScrFI | CCNGG | 4 cut(s) | 1284, 1295, 1954, 2641 |
| SduI | GDGCHC | 3 cut(s) | 12, 168, 1158 |
| SfaNI | GCATC | 6 cut(s) | 1433, 1483, 1854, 2193, 2645, 2668 |
| SfcI | CTRYAG | 3 cut(s) | 588, 1644, 2112 |
| SfuI | TTCGAA | 2 cut(s) | 106, 396 |
| SgrDI | CGTCGACG | 1 cut(s) | 66 |
| SinI | GGWCC | 2 cut(s) | 437, 596 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 854, 1002, 1686, 2532 |
| SmlI | CTYRAG | 2 cut(s) | 77, 2569 |
| SmoI | CTYRAG | 2 cut(s) | 77, 2569 |
| SsiI | CCGC | 5 cut(s) | 617, 1374, 1503, 1657, 1942 |
| SspI | AATATT | 1 cut(s) | 2794 |
| SspMI | CTAG | 8 cut(s) | 681, 879, 1236, 1343, 1598, 1911, 2139, 2472 |
| SstI | GAGCTC | 1 cut(s) | 168 |
| StyD4I | CCNGG | 4 cut(s) | 1282, 1293, 1952, 2639 |
| StyI | CCWWGG | 2 cut(s) | 1887, 2423 |
| TaiI | ACGT | 4 cut(s) | 132, 407, 568, 2655 |
| TaqI | TCGA | 5 cut(s) | 67, 106, 396, 1351, 2678 |
| TatI | WGTACW | 2 cut(s) | 1409, 2822 |
| TauI | GCSGC | 2 cut(s) | 1505, 1659 |
| TfiI | GAWTC | 6 cut(s) | 266, 755, 1356, 1879, 2705, 2719 |
| Tru1I | TTAA | 9 cut(s) | 414, 477, 1113, 1605, 1724, 2388, 2495, 2646, 2790 |
| Tru9I | TTAA | 9 cut(s) | 414, 477, 1113, 1605, 1724, 2388, 2495, 2646, 2790 |
| TscAI | CASTG | 4 cut(s) | 125, 361, 1722, 2332 |
| TseFI | GTSAC | 6 cut(s) | 897, 1688, 1817, 2269, 2310, 2667 |
| TseI | GCWGC | 6 cut(s) | 136, 272, 1907, 2429, 2590, 2693 |
| Tsp45I | GTSAC | 6 cut(s) | 897, 1688, 1817, 2269, 2310, 2667 |
| TspRI | CASTG | 4 cut(s) | 125, 361, 1722, 2332 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1223 |
| VpaK11BI | GGWCC | 2 cut(s) | 437, 596 |
| VspI | ATTAAT | 1 cut(s) | 414 |
| XapI | RAATTY | 7 cut(s) | 108, 630, 933, 1118, 1184, 1700, 1993 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 958, 1004, 1667 |
| XmiI | GTMKAC | 2 cut(s) | 67, 1279 |
| XspI | CTAG | 8 cut(s) | 681, 879, 1236, 1343, 1598, 1911, 2139, 2472 |
| Zsp2I | ATGCAT | 2 cut(s) | 1769, 2005 |