Rorug02G0180500

WEB family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0012986
Physical Location & Seq
Reverse (-)
16717133 .. 16718792
1660 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0180500.1

Sequence Viewer

Length: 1272 bp
ATGAAATTCAAACTTCCCAATCTACCCCTCAAAACCCTTCCCCTAAAACCCAAGTCCCAAATGGCCTCACTTCTCACCGCCGCCGAGCCCCAAACCCGAATTCCCCACCCACCGGAAGACCTCGATGACGTCCTCTGCTCCGCCCAGCAACAGCAGCAGCAGCAGCAGTTGGATTTGGCTGAAACGGCGCCGTTTCGGAGCTTGAGCGGCGAGTCGCGAATTGAACGAGCATGGGCTCACTGGACGAAGCTGGGCCGGCCCAAGTTGATCGTGGCTCCGATGGTGGACAACTCCGAGCTCCCGTTTCGGATGCTCTGCCGCAAGTACGGCGCCGACGCTGCCTACACCCCCATGCTTCACTCTCGGATTTTTACCGAGACTGAGAAGTATCGGAACCAAGAATTTACCACTTGCAAGGAGGATCGTCCGTTGTTTGTTCAATTCTGTGCTAATGATCCTGAGGTTTTACTGGAAGCCGCAAAGAGAGTGGAGCCTTACTGTGATTATGTTGACATTAATTTGGGGTGTCCTCAGAGAATTGCCAGGCGGGGGAACTATGGAGCTTTTCTGATGGATAAGCTTCCTCTTGTAAAATCTCTAGTAGAAAACTTGGTTGCCAATCTTTATGTCCCTGTTTCATGCAAAATCCGTATCTTCCCAAACTTGGATGATACAATTAAGTATGCTAGGATGCTAGAGGATGCTGGTTGCTCTCTTTTAGCCGTCCATGGCCGAACAAGAGACGAGAAAGACCAGAAGAAAGTGCGGGCCAACTGGGATGCCATCAAGGCTGTGAAGAATTCTGTCAAAATACCTGTGATTGCCAATGGGAACATAAGGCACCTGGATGATGCGCACGACTGTTTGAAATACACAGGTGCTGATGGGGTACTTTCTGCTGAGTCTCTTCTTGAAAATCCAGCACTCTTTGCTGGTTTTCGAACGGCTGAATGGGTTGAGGAGGGTGAAGAATGCAATAAAGATCGGAAACTGGACCAGGCAGATCTTTTGGTGGAGTATCTGAAGCTTTGTGAACAATACCCTGTACCTTGGCGTATGATTCGTGCTCATGTGCACAAGATGCTGGGAGACTGGTTCAGAATGCATCCACATGTAAGAGAAGATTTGAATGCACAGCACATTCTCACTTTTGAGTTTCTCTATAACATGGTGGATCGGCTTAGAGAGCTGGGTAAAGGAACTCCCCTTCATCTTAAGGATACTAATGCTGCCAGTATTCCAGCAAATGGGCTGGCTGTGTCAGCTGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

423

Amino Acids

48.16

Weight (kDa)

7.17

Isoelectric Point (pI)

32.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dus PF01207 91 - 376 2.6e-77 Dihydrouridine synthase (Dus)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012986)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G40020
fragaria_vesca FvH4_1g20290
malus_domestica MD03G1184100.v1.1 MD11G1200900.v1.1
prunus_persica Prupe.6G192500_v2.0.a1
pyrus_communis pycom03g13740
rosa_chinensis RchiOBHm_Chr2g0112431
rosa_laevigata RLG00000017980
rosa_multiflora Rmu_co8429047.1_g000001 Rmu_sc0004467.1_g000073 Rmu_sc0004467.1_g000074
rosa_roxburghii Rroxscaffold_2G00131450
rosa_rugosa Rorug02G0180500
rosa_samantha Rh2AG233900 Rh2BG247200 Rh2CG238400 Rh2DG241500
rosa_wichuraiana Rw2G018110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 132
Acc16I TGCGCA 1 cut(s) 855
AccB1I GGYRCC 3 cut(s) 187, 329, 840
AccB7I CCANNNNNTGG 1 cut(s) 1247
AccBSI CCGCTC 1 cut(s) 207
AccII CGCG 1 cut(s) 217
AciI CCGC 8 cut(s) 78, 81, 141, 207, 319, 477, 547, 766
AclWI GGATC 3 cut(s) 429, 449, 1182
AcoI YGGCCR 1 cut(s) 730
AcsI RAATTY 4 cut(s) 5, 99, 401, 799
AcuI CTGAAG 1 cut(s) 1043
AcyI GRCGYC 3 cut(s) 129, 188, 330
AfaI GTAC 3 cut(s) 326, 891, 1047
AfiI CCNNNNNNNGG 4 cut(s) 112, 549, 664, 1247
AflII CTTAAG 1 cut(s) 1214
AflIII ACRYGT 1 cut(s) 1111
AgsI TTSAA 6 cut(s) 10, 224, 440, 868, 914, 1129
AjnI CCWGG 3 cut(s) 542, 843, 996
AjuI GAANNNNNNNTTGG 2 cut(s) 84, 116
AluBI AGCT 8 cut(s) 201, 250, 298, 563, 580, 1027, 1189, 1265
AluI AGCT 8 cut(s) 201, 250, 298, 563, 580, 1027, 1189, 1265
Alw21I GWGCWC 3 cut(s) 300, 1069, 1077
Alw26I GTCTC 4 cut(s) 371, 735, 909, 1083
Alw44I GTGCAC 1 cut(s) 1073
AlwI GGATC 3 cut(s) 429, 449, 1182
AlwNI CAGNNNCTG 1 cut(s) 881
AoxI GGCC 5 cut(s) 63, 253, 257, 730, 768
ApaLI GTGCAC 1 cut(s) 1073
ApeKI GCWGC 6 cut(s) 154, 157, 160, 163, 338, 1229
ApoI RAATTY 4 cut(s) 5, 99, 401, 799
AseI ATTAAT 1 cut(s) 516
AspLEI GCGC 3 cut(s) 190, 332, 856
AspS9I GGNCC 4 cut(s) 253, 258, 768, 994
AsuHPI GGTGA 2 cut(s) 67, 977
AsuII TTCGAA 1 cut(s) 940
AvaII GGWCC 1 cut(s) 994
AxyI CCTNAGG 1 cut(s) 459
BaeGI GKGCMC 1 cut(s) 1077
BanI GGYRCC 3 cut(s) 187, 329, 840
BanII GRGCYC 3 cut(s) 90, 238, 300
BbsI GAAGAC 1 cut(s) 123
Bbv12I GWGCWC 3 cut(s) 300, 1069, 1077
BbvI GCAGC 6 cut(s) 166, 169, 172, 175, 325, 1216
BccI CCATC 4 cut(s) 274, 565, 791, 878
BceAI ACGGC 5 cut(s) 175, 201, 343, 707, 960
BciT130I CCWGG 3 cut(s) 544, 845, 998
BciVI GTATCC 1 cut(s) 1213
BcoDI GTCTC 4 cut(s) 371, 735, 909, 1083
BfaI CTAG 3 cut(s) 599, 687, 695
BfoI RGCGCY 2 cut(s) 191, 333
BfrI CTTAAG 1 cut(s) 1214
BfuI GTATCC 1 cut(s) 1213
BglI GCCNNNNNGGC 1 cut(s) 788
BglII AGATCT 1 cut(s) 1003
Bme1390I CCNGG 3 cut(s) 544, 845, 998
Bme18I GGWCC 1 cut(s) 994
BmgT120I GGNCC 4 cut(s) 253, 258, 768, 994
BmiI GGNNCC 6 cut(s) 189, 276, 331, 395, 492, 842
BmrFI CCNGG 3 cut(s) 544, 845, 998
BmrI ACTGGG 1 cut(s) 784
BmsI GCATC 7 cut(s) 300, 681, 691, 769, 841, 1071, 1114
BmuI ACTGGG 1 cut(s) 784
BpiI GAAGAC 1 cut(s) 123
Bpu14I TTCGAA 1 cut(s) 940
BpuEI CTTGAG 1 cut(s) 223
BsaHI GRCGYC 3 cut(s) 129, 188, 330
BsaJI CCNNGG 2 cut(s) 727, 1049
BsaWI WCCGGW 1 cut(s) 112
Bsc4I CCNNNNNNNGG 4 cut(s) 112, 549, 664, 1247
Bse118I RCCGGY 1 cut(s) 255
Bse1I ACTGG 6 cut(s) 245, 474, 779, 996, 1097, 1233
Bse21I CCTNAGG 1 cut(s) 459
BseBI CCWGG 3 cut(s) 544, 845, 998
BseDI CCNNGG 2 cut(s) 727, 1049
BseGI GGATG 7 cut(s) 315, 673, 696, 706, 784, 853, 1105
BseLI CCNNNNNNNGG 4 cut(s) 112, 549, 664, 1247
BseMII CTCAG 4 cut(s) 372, 450, 545, 891
BseNI ACTGG 6 cut(s) 245, 474, 779, 996, 1097, 1233
BseRI GAGGAG 1 cut(s) 974
BseSI GKGCMC 1 cut(s) 1077
BseXI GCAGC 6 cut(s) 166, 169, 172, 175, 325, 1216
BseYI CCCAGC 4 cut(s) 144, 250, 1084, 1189
Bsh1236I CGCG 1 cut(s) 217
BshFI GGCC 5 cut(s) 65, 255, 259, 732, 770
BshNI GGYRCC 3 cut(s) 187, 329, 840
BsiHKAI GWGCWC 3 cut(s) 300, 1069, 1077
BsiSI CCGG 2 cut(s) 113, 256
BslFI GGGAC 2 cut(s) 40, 614
BslI CCNNNNNNNGG 4 cut(s) 112, 549, 664, 1247
BsmAI GTCTC 4 cut(s) 371, 735, 909, 1083
BsmBI CGTCTC 1 cut(s) 735
BsmFI GGGAC 2 cut(s) 40, 614
BsmI GAATGC 3 cut(s) 977, 1107, 1135
BsnI GGCC 5 cut(s) 65, 255, 259, 732, 770
Bsp119I TTCGAA 1 cut(s) 940
Bsp1286I GDGCHC 5 cut(s) 90, 238, 300, 1069, 1077
Bsp143I GATC 6 cut(s) 267, 421, 454, 982, 1003, 1174
Bsp19I CCATGG 1 cut(s) 727
Bsp68I TCGCGA 1 cut(s) 217
BspACI CCGC 8 cut(s) 78, 81, 141, 207, 319, 477, 547, 766
BspANI GGCC 5 cut(s) 65, 255, 259, 732, 770
BspCNI CTCAG 4 cut(s) 373, 451, 544, 892
BspFNI CGCG 1 cut(s) 217
BspLI GGNNCC 6 cut(s) 189, 276, 331, 395, 492, 842
BspPI GGATC 3 cut(s) 429, 449, 1182
BspT104I TTCGAA 1 cut(s) 940
BspT107I GGYRCC 3 cut(s) 187, 329, 840
BspTI CTTAAG 1 cut(s) 1214
BsrBI CCGCTC 1 cut(s) 207
BsrFI RCCGGY 1 cut(s) 255
BsrI ACTGG 6 cut(s) 245, 474, 779, 996, 1097, 1233
BssAI RCCGGY 1 cut(s) 255
BssECI CCNNGG 2 cut(s) 727, 1049
BssMI GATC 6 cut(s) 267, 421, 454, 982, 1003, 1174
BssNI GRCGYC 3 cut(s) 129, 188, 330
BssT1I CCWWGG 2 cut(s) 727, 1049
Bst2UI CCWGG 3 cut(s) 544, 845, 998
Bst4CI ACNGT 2 cut(s) 500, 863
Bst6I CTCTTC 1 cut(s) 912
BstACI GRCGYC 3 cut(s) 129, 188, 330
BstAFI CTTAAG 1 cut(s) 1214
BstAPI GCANNNNNTGC 2 cut(s) 929, 1081
BstBI TTCGAA 1 cut(s) 940
BstC8I GCNNGC 3 cut(s) 257, 768, 1254
BstDEI CTNAG 5 cut(s) 381, 459, 531, 900, 1181
BstDSI CCRYGG 1 cut(s) 727
BstF5I GGATG 7 cut(s) 315, 673, 696, 706, 784, 853, 1105
BstFNI CGCG 1 cut(s) 217
BstH2I RGCGCY 2 cut(s) 191, 333
BstHHI GCGC 3 cut(s) 190, 332, 856
BstKTI GATC 6 cut(s) 270, 424, 457, 985, 1006, 1177
BstMAI GTCTC 4 cut(s) 371, 735, 909, 1083
BstMBI GATC 6 cut(s) 267, 421, 454, 982, 1003, 1174
BstNI CCWGG 3 cut(s) 544, 845, 998
BstNSI RCATGY 1 cut(s) 1115
BstSCI CCNGG 3 cut(s) 542, 843, 996
BstSLI GKGCMC 1 cut(s) 1077
BstUI CGCG 1 cut(s) 217
BstV1I GCAGC 6 cut(s) 166, 169, 172, 175, 325, 1216
BstV2I GAAGAC 1 cut(s) 123
BstX2I RGATCY 1 cut(s) 1003
BstYI RGATCY 1 cut(s) 1003
Bsu36I CCTNAGG 1 cut(s) 459
BsuI GTATCC 1 cut(s) 1213
BsuRI GGCC 5 cut(s) 65, 255, 259, 732, 770
BtgI CCRYGG 1 cut(s) 727
BtsCI GGATG 7 cut(s) 315, 673, 696, 706, 784, 853, 1105
BtsIMutI CAGTG 1 cut(s) 238
BtuMI TCGCGA 1 cut(s) 217
Cac8I GCNNGC 3 cut(s) 257, 768, 1254
CaiI CAGNNNCTG 1 cut(s) 881
CfoI GCGC 3 cut(s) 190, 332, 856
Cfr10I RCCGGY 1 cut(s) 255
Cfr13I GGNCC 4 cut(s) 253, 258, 768, 994
CseI GACGC 1 cut(s) 344
Csp6I GTAC 3 cut(s) 325, 890, 1046
CspCI CAANNNNNGTGG 2 cut(s) 468, 503
CviAII CATG 7 cut(s) 231, 352, 639, 728, 1070, 1112, 1168
CviQI GTAC 3 cut(s) 325, 890, 1046
DdeI CTNAG 5 cut(s) 381, 459, 531, 900, 1181
DinI GGCGCC 2 cut(s) 189, 331
DpnI GATC 6 cut(s) 269, 423, 456, 984, 1005, 1176
DpnII GATC 6 cut(s) 267, 421, 454, 982, 1003, 1174
EaeI YGGCCR 1 cut(s) 730
Eam1104I CTCTTC 1 cut(s) 912
EarI CTCTTC 1 cut(s) 912
EciI GGCGGA 1 cut(s) 130
Ecl136II GAGCTC 1 cut(s) 298
Eco130I CCWWGG 2 cut(s) 727, 1049
Eco24I GRGCYC 3 cut(s) 90, 238, 300
Eco47I GGWCC 1 cut(s) 994
Eco53kI GAGCTC 1 cut(s) 298
Eco57I CTGAAG 1 cut(s) 1043
Eco81I CCTNAGG 1 cut(s) 459
EcoICRI GAGCTC 1 cut(s) 298
EcoRI GAATTC 2 cut(s) 99, 799
EcoRII CCWGG 3 cut(s) 542, 843, 996
EcoT14I CCWWGG 2 cut(s) 727, 1049
EcoT22I ATGCAT 1 cut(s) 1107
EcoT38I GRGCYC 3 cut(s) 90, 238, 300
EgeI GGCGCC 2 cut(s) 189, 331
EheI GGCGCC 2 cut(s) 189, 331
ErhI CCWWGG 2 cut(s) 727, 1049
Esp3I CGTCTC 1 cut(s) 735
FaeI CATG 7 cut(s) 234, 355, 642, 731, 1073, 1115, 1171
FaqI GGGAC 2 cut(s) 40, 614
FatI CATG 7 cut(s) 230, 351, 638, 727, 1069, 1111, 1167
FauI CCCGC 2 cut(s) 540, 759
FokI GGATG 7 cut(s) 322, 680, 703, 713, 791, 860, 1092
FriOI GRGCYC 3 cut(s) 90, 238, 300
FseI GGCCGGCC 1 cut(s) 259
FspAI RTGCGCAY 1 cut(s) 855
FspBI CTAG 3 cut(s) 599, 687, 695
FspI TGCGCA 1 cut(s) 855
GlaI GCGC 3 cut(s) 189, 331, 855
GsaI CCCAGC 4 cut(s) 148, 254, 1088, 1193
HaeII RGCGCY 2 cut(s) 191, 333
HaeIII GGCC 5 cut(s) 65, 255, 259, 732, 770
HapII CCGG 2 cut(s) 113, 256
HgaI GACGC 1 cut(s) 344
HhaI GCGC 3 cut(s) 190, 332, 856
Hin1I GRCGYC 3 cut(s) 129, 188, 330
Hin1II CATG 7 cut(s) 234, 355, 642, 731, 1073, 1115, 1171
Hin6I GCGC 3 cut(s) 188, 330, 854
HinP1I GCGC 3 cut(s) 188, 330, 854
HincII GTYRAC 1 cut(s) 511
HindII GTYRAC 1 cut(s) 511
HindIII AAGCTT 2 cut(s) 578, 1025
HinfI GANTC 3 cut(s) 212, 902, 1060
HpaII CCGG 2 cut(s) 113, 256
HphI GGTGA 2 cut(s) 67, 977
Hpy166II GTNNAC 4 cut(s) 286, 511, 1034, 1075
Hpy188III TCNNGA 3 cut(s) 216, 458, 911
Hpy8I GTNNAC 4 cut(s) 286, 511, 1034, 1075
Hpy99I CGWCG 1 cut(s) 338
HpyAV CCTTC 2 cut(s) 47, 1217
HpyCH4III ACNGT 2 cut(s) 500, 863
HpyCH4IV ACGT 1 cut(s) 129
HpyCH4V TGCA 6 cut(s) 414, 642, 975, 1075, 1105, 1133
HpyF3I CTNAG 5 cut(s) 381, 459, 531, 900, 1181
HpySE526I ACGT 1 cut(s) 129
Hsp92I GRCGYC 3 cut(s) 129, 188, 330
Hsp92II CATG 7 cut(s) 234, 355, 642, 731, 1073, 1115, 1171
HspAI GCGC 3 cut(s) 188, 330, 854
KasI GGCGCC 2 cut(s) 187, 329
KroI GCCGGC 1 cut(s) 255
KroNI GCCGGC 1 cut(s) 257
Kzo9I GATC 6 cut(s) 267, 421, 454, 982, 1003, 1174
LmnI GCTCC 6 cut(s) 143, 198, 280, 303, 490, 560
Lsp1109I GCAGC 6 cut(s) 166, 169, 172, 175, 325, 1216
LweI GCATC 7 cut(s) 300, 681, 691, 769, 841, 1071, 1114
MaeI CTAG 3 cut(s) 599, 687, 695
MaeII ACGT 1 cut(s) 129
MalI GATC 6 cut(s) 269, 423, 456, 984, 1005, 1176
MbiI CCGCTC 1 cut(s) 207
MboI GATC 6 cut(s) 267, 421, 454, 982, 1003, 1174
MboII GAAGA 7 cut(s) 128, 646, 769, 808, 899, 980, 1133
MflI RGATCY 1 cut(s) 1003
MhlI GDGCHC 5 cut(s) 90, 238, 300, 1069, 1077
MluCI AATT 9 cut(s) 5, 99, 219, 401, 440, 517, 537, 675, 799
Mly113I GGCGCC 2 cut(s) 188, 330
MlyI GAGTC 2 cut(s) 221, 911
MmeI TCCRAC 1 cut(s) 150
Mph1103I ATGCAT 1 cut(s) 1107
MroNI GCCGGC 1 cut(s) 255
MseI TTAA 3 cut(s) 516, 678, 1215
MslI CAYNNNNRTG 3 cut(s) 350, 846, 1110
MspA1I CMGCKG 1 cut(s) 1265
MspCI CTTAAG 1 cut(s) 1214
MspI CCGG 2 cut(s) 113, 256
MspR9I CCNGG 3 cut(s) 544, 845, 998
Mva1269I GAATGC 3 cut(s) 977, 1107, 1135
MvaI CCWGG 3 cut(s) 544, 845, 998
MvnI CGCG 1 cut(s) 217
NaeI GCCGGC 1 cut(s) 257
NarI GGCGCC 2 cut(s) 188, 330
NcoI CCATGG 1 cut(s) 727
NdeII GATC 6 cut(s) 267, 421, 454, 982, 1003, 1174
NgoMIV GCCGGC 1 cut(s) 255
NlaIII CATG 7 cut(s) 234, 355, 642, 731, 1073, 1115, 1171
NlaIV GGNNCC 6 cut(s) 189, 276, 331, 395, 492, 842
NmeAIII GCCGAG 1 cut(s) 109
NruI TCGCGA 1 cut(s) 217
NsbI TGCGCA 1 cut(s) 855
NsiI ATGCAT 1 cut(s) 1107
NspI RCATGY 1 cut(s) 1115
NspV TTCGAA 1 cut(s) 940
PciI ACATGT 1 cut(s) 1111
PctI GAATGC 3 cut(s) 977, 1107, 1135
PdiI GCCGGC 1 cut(s) 257
PfeI GAWTC 1 cut(s) 1060
PflMI CCANNNNNTGG 1 cut(s) 1247
PleI GAGTC 2 cut(s) 220, 910
PluTI GGCGCC 2 cut(s) 191, 333
PpsI GAGTC 2 cut(s) 220, 910
PscI ACATGT 1 cut(s) 1111
PshBI ATTAAT 1 cut(s) 516
Psp124BI GAGCTC 1 cut(s) 300
Psp6I CCWGG 3 cut(s) 542, 843, 996
PspFI CCCAGC 4 cut(s) 144, 250, 1084, 1189
PspGI CCWGG 3 cut(s) 542, 843, 996
PspN4I GGNNCC 6 cut(s) 189, 276, 331, 395, 492, 842
PspPI GGNCC 4 cut(s) 253, 258, 768, 994
PstNI CAGNNNCTG 1 cut(s) 881
PsuI RGATCY 1 cut(s) 1003
PvuII CAGCTG 1 cut(s) 1265
RigI GGCCGGCC 1 cut(s) 259
RruI TCGCGA 1 cut(s) 217
RsaI GTAC 3 cut(s) 326, 891, 1047
RsaNI GTAC 3 cut(s) 325, 890, 1046
RseI CAYNNNNRTG 3 cut(s) 350, 846, 1110
SacI GAGCTC 1 cut(s) 300
SaqAI TTAA 3 cut(s) 516, 678, 1215
Sau3AI GATC 6 cut(s) 267, 421, 454, 982, 1003, 1174
Sau96I GGNCC 4 cut(s) 253, 258, 768, 994
SchI GAGTC 2 cut(s) 221, 911
ScrFI CCNGG 3 cut(s) 544, 845, 998
SduI GDGCHC 5 cut(s) 90, 238, 300, 1069, 1077
SfaNI GCATC 7 cut(s) 300, 681, 691, 769, 841, 1071, 1114
SfoI GGCGCC 2 cut(s) 189, 331
SfuI TTCGAA 1 cut(s) 940
SinI GGWCC 1 cut(s) 994
SmiMI CAYNNNNRTG 3 cut(s) 350, 846, 1110
SmlI CTYRAG 2 cut(s) 202, 1214
SmoI CTYRAG 2 cut(s) 202, 1214
Sse9I AATT 9 cut(s) 5, 99, 219, 401, 440, 517, 537, 675, 799
SsiI CCGC 8 cut(s) 78, 81, 141, 207, 319, 477, 547, 766
SspDI GGCGCC 2 cut(s) 187, 329
SspMI CTAG 3 cut(s) 599, 687, 695
SstI GAGCTC 1 cut(s) 300
StyD4I CCNGG 3 cut(s) 542, 843, 996
StyI CCWWGG 2 cut(s) 727, 1049
TaaI ACNGT 2 cut(s) 500, 863
TaiI ACGT 1 cut(s) 132
TaqI TCGA 2 cut(s) 123, 940
TasI AATT 9 cut(s) 5, 99, 219, 401, 440, 517, 537, 675, 799
TauI GCSGC 4 cut(s) 83, 210, 321, 479
TfiI GAWTC 1 cut(s) 1060
Tru1I TTAA 3 cut(s) 516, 678, 1215
Tru9I TTAA 3 cut(s) 516, 678, 1215
TscAI CASTG 1 cut(s) 245
TseI GCWGC 6 cut(s) 154, 157, 160, 163, 338, 1229
TspDTI ATGAA 3 cut(s) 17, 627, 1199
TspGWI ACGGA 2 cut(s) 417, 638
TspRI CASTG 1 cut(s) 245
Van91I CCANNNNNTGG 1 cut(s) 1247
Vha464I CTTAAG 1 cut(s) 1214
VneI GTGCAC 1 cut(s) 1073
VpaK11BI GGWCC 1 cut(s) 994
VspI ATTAAT 1 cut(s) 516
XapI RAATTY 4 cut(s) 5, 99, 401, 799
XceI RCATGY 1 cut(s) 1115
XcmI CCANNNNNNNNNTGG 2 cut(s) 58, 268
XspI CTAG 3 cut(s) 599, 687, 695
ZraI GACGTC 1 cut(s) 130
Zsp2I ATGCAT 1 cut(s) 1107
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.