No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g24530 |
| prunus_persica | Prupe.4G272900_v2.0.a1 |
| pyrus_communis | pycom14g02640 |
| rosa_chinensis | RchiOBHm_Chr2g0121941 |
| rosa_laevigata | RLG00000018635 |
| rosa_multiflora | Rmu_sc0003880.1_g000022 |
| rosa_roxburghii | Rroxscaffold_2G00122200 |
| rosa_rugosa | Rorug02G0234900 |
| rosa_samantha | Rh2AG292000 Rh2BG302200 Rh2CG281000 |
| rosa_wichuraiana | Rw2G023410 Rw2G023430 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 50 |
| AdeI | CACNNNGTG | 1 cut(s) | 367 |
| AfaI | GTAC | 4 cut(s) | 35, 308, 384, 414 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 396 |
| AgsI | TTSAA | 1 cut(s) | 334 |
| AjnI | CCWGG | 1 cut(s) | 395 |
| AluBI | AGCT | 3 cut(s) | 133, 140, 239 |
| AluI | AGCT | 3 cut(s) | 133, 140, 239 |
| AoxI | GGCC | 2 cut(s) | 204, 398 |
| AseI | ATTAAT | 2 cut(s) | 354, 375 |
| AspS9I | GGNCC | 1 cut(s) | 117 |
| AsuHPI | GGTGA | 2 cut(s) | 55, 67 |
| AvaII | GGWCC | 1 cut(s) | 117 |
| BbsI | GAAGAC | 1 cut(s) | 322 |
| BccI | CCATC | 1 cut(s) | 9 |
| BciT130I | CCWGG | 1 cut(s) | 397 |
| BfaI | CTAG | 1 cut(s) | 45 |
| Bme1390I | CCNGG | 1 cut(s) | 397 |
| Bme18I | GGWCC | 1 cut(s) | 117 |
| BmgT120I | GGNCC | 1 cut(s) | 117 |
| BmiI | GGNNCC | 2 cut(s) | 118, 435 |
| BmrFI | CCNGG | 1 cut(s) | 397 |
| BmsI | GCATC | 2 cut(s) | 59, 415 |
| BpiI | GAAGAC | 1 cut(s) | 322 |
| BsaBI | GATNNNNATC | 1 cut(s) | 89 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 396 |
| Bse8I | GATNNNNATC | 1 cut(s) | 89 |
| BseBI | CCWGG | 1 cut(s) | 397 |
| BseGI | GGATG | 1 cut(s) | 20 |
| BseJI | GATNNNNATC | 1 cut(s) | 89 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 396 |
| BseRI | GAGGAG | 1 cut(s) | 248 |
| BshFI | GGCC | 2 cut(s) | 206, 400 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 396 |
| BsmI | GAATGC | 2 cut(s) | 319, 445 |
| BsnI | GGCC | 2 cut(s) | 206, 400 |
| Bsp1407I | TGTACA | 2 cut(s) | 382, 412 |
| BspANI | GGCC | 2 cut(s) | 206, 400 |
| BspLI | GGNNCC | 2 cut(s) | 118, 435 |
| BsrGI | TGTACA | 2 cut(s) | 382, 412 |
| Bst2UI | CCWGG | 1 cut(s) | 397 |
| Bst4CI | ACNGT | 1 cut(s) | 127 |
| BstAUI | TGTACA | 2 cut(s) | 382, 412 |
| BstDEI | CTNAG | 1 cut(s) | 297 |
| BstF5I | GGATG | 1 cut(s) | 20 |
| BstNI | CCWGG | 1 cut(s) | 397 |
| BstSCI | CCNGG | 1 cut(s) | 395 |
| BstV2I | GAAGAC | 1 cut(s) | 322 |
| BsuRI | GGCC | 2 cut(s) | 206, 400 |
| BtsCI | GGATG | 1 cut(s) | 20 |
| Cfr13I | GGNCC | 1 cut(s) | 117 |
| Csp6I | GTAC | 4 cut(s) | 34, 307, 383, 413 |
| CviAII | CATG | 3 cut(s) | 79, 143, 160 |
| CviJI | RGCY | 6 cut(s) | 19, 133, 140, 206, 239, 400 |
| CviKI_1 | RGCY | 6 cut(s) | 19, 133, 140, 206, 239, 400 |
| CviQI | GTAC | 4 cut(s) | 34, 307, 383, 413 |
| DdeI | CTNAG | 1 cut(s) | 297 |
| DraIII | CACNNNGTG | 1 cut(s) | 367 |
| Eco47I | GGWCC | 1 cut(s) | 117 |
| Eco57I | CTGAAG | 1 cut(s) | 50 |
| EcoO109I | RGGNCCY | 1 cut(s) | 117 |
| EcoRII | CCWGG | 1 cut(s) | 395 |
| FaeI | CATG | 3 cut(s) | 82, 146, 163 |
| FaiI | YATR | 4 cut(s) | 80, 144, 161, 405 |
| FatI | CATG | 3 cut(s) | 78, 142, 159 |
| FokI | GGATG | 1 cut(s) | 27 |
| FspBI | CTAG | 1 cut(s) | 45 |
| HaeIII | GGCC | 2 cut(s) | 206, 400 |
| Hin1II | CATG | 3 cut(s) | 82, 146, 163 |
| HphI | GGTGA | 2 cut(s) | 55, 67 |
| Hpy166II | GTNNAC | 3 cut(s) | 36, 109, 267 |
| Hpy188I | TCNGA | 3 cut(s) | 14, 157, 197 |
| Hpy8I | GTNNAC | 3 cut(s) | 36, 109, 267 |
| HpyCH4III | ACNGT | 1 cut(s) | 127 |
| HpyCH4V | TGCA | 4 cut(s) | 50, 293, 317, 428 |
| HpyF3I | CTNAG | 1 cut(s) | 297 |
| Hsp92II | CATG | 3 cut(s) | 82, 146, 163 |
| LmnI | GCTCC | 1 cut(s) | 151 |
| LpnPI | CCDG | 5 cut(s) | 188, 295, 382, 409, 414 |
| LweI | GCATC | 2 cut(s) | 59, 415 |
| MaeI | CTAG | 1 cut(s) | 45 |
| MaeIII | GTNAC | 2 cut(s) | 61, 359 |
| MboII | GAAGA | 1 cut(s) | 322 |
| MluCI | AATT | 1 cut(s) | 151 |
| MmeI | TCCRAC | 1 cut(s) | 49 |
| MnlI | CCTC | 4 cut(s) | 217, 266, 269, 276 |
| MseI | TTAA | 3 cut(s) | 183, 354, 375 |
| MslI | CAYNNNNRTG | 1 cut(s) | 83 |
| MspR9I | CCNGG | 1 cut(s) | 397 |
| Mva1269I | GAATGC | 2 cut(s) | 319, 445 |
| MvaI | CCWGG | 1 cut(s) | 397 |
| NlaIII | CATG | 3 cut(s) | 82, 146, 163 |
| NlaIV | GGNNCC | 2 cut(s) | 118, 435 |
| NmuCI | GTSAC | 2 cut(s) | 61, 359 |
| PctI | GAATGC | 2 cut(s) | 319, 445 |
| PpuMI | RGGWCCY | 1 cut(s) | 117 |
| PshBI | ATTAAT | 2 cut(s) | 354, 375 |
| Psp5II | RGGWCCY | 1 cut(s) | 117 |
| Psp6I | CCWGG | 1 cut(s) | 395 |
| PspGI | CCWGG | 1 cut(s) | 395 |
| PspN4I | GGNNCC | 2 cut(s) | 118, 435 |
| PspPI | GGNCC | 1 cut(s) | 117 |
| PspPPI | RGGWCCY | 1 cut(s) | 117 |
| RsaI | GTAC | 4 cut(s) | 35, 308, 384, 414 |
| RsaNI | GTAC | 4 cut(s) | 34, 307, 383, 413 |
| RseI | CAYNNNNRTG | 1 cut(s) | 83 |
| SaqAI | TTAA | 3 cut(s) | 183, 354, 375 |
| Sau96I | GGNCC | 1 cut(s) | 117 |
| ScrFI | CCNGG | 1 cut(s) | 397 |
| SetI | ASST | 3 cut(s) | 135, 142, 241 |
| SfaNI | GCATC | 2 cut(s) | 59, 415 |
| SinI | GGWCC | 1 cut(s) | 117 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 83 |
| Sse9I | AATT | 1 cut(s) | 151 |
| SspMI | CTAG | 1 cut(s) | 45 |
| StyD4I | CCNGG | 1 cut(s) | 395 |
| TaaI | ACNGT | 1 cut(s) | 127 |
| TaqI | TCGA | 1 cut(s) | 235 |
| TasI | AATT | 1 cut(s) | 151 |
| TatI | WGTACW | 3 cut(s) | 33, 382, 412 |
| Tru1I | TTAA | 3 cut(s) | 183, 354, 375 |
| Tru9I | TTAA | 3 cut(s) | 183, 354, 375 |
| TseFI | GTSAC | 2 cut(s) | 61, 359 |
| Tsp45I | GTSAC | 2 cut(s) | 61, 359 |
| TspDTI | ATGAA | 1 cut(s) | 160 |
| VpaK11BI | GGWCC | 1 cut(s) | 117 |
| VspI | ATTAAT | 2 cut(s) | 354, 375 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 157 |
| XspI | CTAG | 1 cut(s) | 45 |