Rorug02G0355500
ERF Family

Thioesterase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0015145
Physical Location & Seq
Reverse (-)
44750645 .. 44760787
10143 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0355500.1

Sequence Viewer

Length: 3231 bp
ATGGTTGGACGACTTAATACCTGCAAGTCATTCAACAAGGATTCCTTTTGTGGTGCTTTTCATTCAATGTGGAGACTGCATGGTACTGTTGATATGCAAGAGAGGGAGGCGCCCTTTTTATCTACCTTCACCAATGAGCGTGACCTTGCGCGGGCAAGCGAGGCGGGGCCATTGAGTTCCAGAGGGCGATGCGGCCCTACTGAGAATCTGCTCCTCCAACTACGCCCACGTGGCGCAATAAAGCGAGCCACGGCGGACCCCACACCGAATCCTTCAAAATCTGCAAACAGCGCCAAACCCAAACCCCTCCGTCTCCTCAGCAAAAAAGAGAGGAAACCAAAGTCTCCGTCGTCTCATCCATCACAATCACTCATCACAGCACACAGTGCTGACTGTACGATGGCAAATGATAAGTCGAAGCATGAAGACAATCTGCCTGGATCTCCTTCACTATTACAATGGTTTGAAGAAATTGAAAAGAATGAAGCTGCTAAGTTCGGGGGGCCTGTTAACAGTAGTACTTCTGTTGGAGCTGATGATATAACCATGCCAGATCCGCTAGTGCCATTATTTCTTTTTCCTGGGACAGATGGAACGTCTAACCCTTACGCTAAGCAAATGCCGCTGACTGATCTTAATTTGATGAATGATCTCACTCCATCCAGTAACTCTCAGAATCCTGTCCCTGACGATGGTTCGGTATATGGGAAGGGTCTTATACCAATCCTACCAATCACAGATTCAGATTTTCTCTGTTGCGAAGGGAACACTGACTTTGGTTATTCAATGATTCCTCATAGTGTGGTCAATGCTTCCTCCAAAGTCTGCGAGTTTCAAAAGCCTTATGTTGATAGGGAATTGGTATCTGGTGTAGGTTCAGCTGCAGCCTTAAATAGTATTCAGCAGGATGGAGAGTTAGATAGTAATATAAACAGGCCTCAGCTAATTGATAACTTCACTGGTGATGGAGGTAGCACCCCTATGTCATGGTCCACATTAGATGATGTAGAAATTGTGATAAATAACAATCTCTTGATTAGTGGAGGTCAAGAGGACCATCCAGAAAGGCTTGACGGGAGTTGCCTAACCCTTGGAATTGGATGCCAGTCAAATGATTTATCGGGAAGAAATGTTGGTTATGATTCTGAAAGGGCTGTCCTTCCTCAGTCGAACATAGTTCACAGTCAAAACGCCAACAGAAGTTTGCATCATTTCCCTAAAGTAGCTGCTGGTTTTTCTTGCGTTCAGAACAATATGGGGCAAGTTGAGAAGCAGCAACAATTTCTTGTGCCGGGAAACATGAATGTCTATCTTGGAGTTGAAGGGAACTGCGATGAAAGATCTTTATATTTTGATCCTAATAACGGTATTCAGGGCTACCCAGCTGTGCCTATTCTACCAGTTGGTAATAGCCTAGCGAGGTTGCCTGATTCTGGACTGAGCAAGGTGAATGAGTTGCCATTGTCATCTTGTCTGAATACGAGTACTTGTCTACCACTGTCTGACCAATCACAAAATCATCATATGGAATCAGGCACAAGAAATGCTTACTTGCACAATCAATCCGGGAAGCCTTTCACAGCTAATGAGGGTATTGCTGCACAAGTTGCTGAAAGAGGTCTTTTTCCAGAAGAATTCAGGTTCAGCCAGCTAGCTAGTAATCCTTATCAACCTGAAGTCGTTAGTGCTGTTCTTTCTTCTACAGACCATCCTGGATTTGTGATAACCGGTCAAGAACTTCCAACTACCAAAGTTAATAGAGCTATTCAACCTCCTAGAGCTTTTGTTGGAACATCTGTTAAGAGGGGTGCAGCTGAAATCTCAGCATGTAGTTACCAAGCTCAACCCACATTTGCAGGTGAAGAAATTCCAGCTACCAAGGTTAGTAAGACTTCTCAGTGTTCGAGGGCTTTTGTTGGAACATCTGTTAAGAGGGGTGCAGCAGAAACATTCACAGGTACTTCCCATGCTGATCCCAGCAAGGCAAGAAGAACTCAATATTCCACTGGTCTATCTGCCGAAGCTCCATTCCTGGAAGTTTCTTCACTCCAAATCTTATCCCAGGATGCTTCTTTCTCAAGTCGAGATCATACTTCTCCATCTCTCCTACACCAGGCCAAAAGCACACCACTGAACCAGCCCCAATCCCAGACCAGGTCTGATCTTCCGCCTGATGTCAAAGGTCTCCCATCCCTGACCCTGAATGCTCCCTCTCTCCAACTCCAAGCCAAGAGTGCTCCATCATTGCCTCCTTTTCCCCAGACCGCTTCATATCTCTCACCTGAAGTCAGATGTAATCCATCACTGTCATCGCTATCCCAGACTTCACCCTCTCTCCCACTCCAAGCTAAAAGTACTCCATTACTCCCATTCCTATTCCAGACTACTTCGTCTCTCGCACCTCAAGTCAAAGGCATTTCATCACTTCCATCCCTATCCCAGACTGCTCCTTCCATCCAAACCCAAGCCAAGAGTATACCCTCATTACCACCCACAACCTCTTCTATACCAACCAAAACAAGAAGGAATGTATTACTTCGACACCAATCCCAGACGGCTCACTCTCTCCTACCCCAAGCCAAAACTATTACATCACTCCCGCTTCCATATTTGACGGTTCCATCTCTTTTACCCATCACCAGTACTACATCACCCCCAACCTTATCCCAGAATGGTCCCTCTTGCCCACCTCAGCCCCAAAATGCTTCTCCACTTCCATCACAAAAGACAACTGGCCGACCACTGCCACCAAAATCCTTGAGAGGTTCATCTCTTCCACAAAAACCTCGGACTGCTTTGCCACTCAGGTCTCATATTCCTTCATCACTGTCATCAAAATTTAGTGCTCCACCACCAATCCCACCCCAACCTCAGACTGCTTCCCCAGTTCCACGGAAATATATAGCTTCACCTTTCTCACCCCAGACTACTCTACCAGTCACACAAAAAGTTAATGCTCCACCTCTGCCACCTCAACACCAGACTGATCCAGTACTCCATATAAAATGGAATGCTGCTGATGAAACTCAACTAATTGGGCACAAGTGCTTGATATGCAAGAGGGATCTTGCCTTCACACCAGACGGCCCTGTTTCTGTGCCACCTATTGCACCAATTGTTGCTGTTCTACCGTGTGGCCACACCTTCCATGACCATTGCTTGCAGCTCATCACCCCGGAAGATGAAAATAAAAGTCCTCCATGCATTCCTTGTGCCATTGGCGAGAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
4HBT

Protein Analysis

1076

Amino Acids

115.17

Weight (kDa)

7.76

Isoelectric Point (pI)

57.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015145)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G52191 AT3G16175
fragaria_vesca FvH4_6g31870 FvH4_6g31870
rosa_chinensis RchiOBHm_Chr2g0139201
rosa_laevigata RLG00000019794
rosa_multiflora Rmu_sc0001803.1_g000007 Rmu_sc0037230.1_g000003
rosa_roxburghii Rroxscaffold_2G00105560
rosa_rugosa Rorug02G0355500 Rorug02G0355500
rosa_samantha Rh2AG405700 Rh2BG416200 Rh2CG391700 Rh2DG425400
rosa_wichuraiana Rw2G033130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1847
AasI GACNNNNNNGTC 1 cut(s) 2389
Acc36I ACCTGC 2 cut(s) 29, 1847
AccB1I GGYRCC 1 cut(s) 109
AccI GTMKAC 2 cut(s) 1492, 2476
AccII CGCG 1 cut(s) 151
AciI CCGC 9 cut(s) 151, 164, 192, 254, 557, 623, 2168, 2265, 2600
AclWI GGATC 6 cut(s) 448, 548, 1349, 1967, 2981, 3072
AcoI YGGCCR 2 cut(s) 2734, 3136
AcsI RAATTY 3 cut(s) 1634, 1866, 2837
AcuI CTGAAG 2 cut(s) 1695, 2304
AcvI CACGTG 1 cut(s) 230
AcyI GRCGYC 1 cut(s) 110
AdeI CACNNNGTG 1 cut(s) 386
AfaI GTAC 8 cut(s) 85, 397, 520, 1486, 1960, 2356, 2644, 2994
AfiI CCNNNNNNNGG 6 cut(s) 151, 692, 1364, 1433, 2113, 2154
AgeI ACCGGT 1 cut(s) 1727
AgsI TTSAA 9 cut(s) 34, 66, 276, 467, 476, 786, 836, 1322, 1769
AjnI CCWGG 7 cut(s) 436, 580, 1711, 2031, 2061, 2112, 2153
AjuI GAANNNNNNNTTGG 2 cut(s) 724, 756
Alw21I GWGCWC 2 cut(s) 2239, 2848
Alw26I GTCTC 7 cut(s) 67, 317, 348, 357, 2189, 2397, 2814
AlwI GGATC 6 cut(s) 448, 548, 1349, 1967, 2981, 3072
AoxI GGCC 8 cut(s) 167, 193, 503, 935, 2115, 2734, 3085, 3136
ApoI RAATTY 3 cut(s) 1634, 1866, 2837
ArsI GACNNNNNNTTYG 4 cut(s) 332, 364, 398, 430
AsiGI ACCGGT 1 cut(s) 1727
Asp700I GAANNNNTTC 2 cut(s) 1574, 1866
AspLEI GCGC 4 cut(s) 112, 151, 236, 293
AspS9I GGNCC 8 cut(s) 167, 194, 256, 503, 990, 1054, 2675, 3086
AsuC2I CCSGG 3 cut(s) 1293, 1567, 3176
AsuNHI GCTAGC 1 cut(s) 1651
AvaII GGWCC 4 cut(s) 256, 990, 1054, 2675
BaeGI GKGCMC 1 cut(s) 3042
BalI TGGCCA 1 cut(s) 3138
BanI GGYRCC 1 cut(s) 109
BbrPI CACGTG 1 cut(s) 230
BbsI GAAGAC 1 cut(s) 432
Bbv12I GWGCWC 2 cut(s) 2239, 2848
BbvCI CCTCAGC 3 cut(s) 317, 939, 2691
BceAI ACGGC 3 cut(s) 267, 2571, 3100
BciT130I CCWGG 7 cut(s) 438, 582, 1713, 2033, 2063, 2114, 2155
BcnI CCSGG 3 cut(s) 1293, 1567, 3176
BcoDI GTCTC 7 cut(s) 67, 317, 348, 357, 2189, 2397, 2814
BfaI CTAG 5 cut(s) 560, 1415, 1652, 1656, 1776
BfmI CTRYAG 2 cut(s) 882, 1701
BfoI RGCGCY 2 cut(s) 113, 294
BfuAI ACCTGC 2 cut(s) 29, 1847
BglI GCCNNNNNGGC 1 cut(s) 231
BglII AGATCT 1 cut(s) 1340
BlpI GCTNAGC 1 cut(s) 612
BmcAI AGTACT 5 cut(s) 520, 1486, 2356, 2644, 2994
Bme18I GGWCC 4 cut(s) 256, 990, 1054, 2675
BmgT120I GGNCC 8 cut(s) 167, 194, 256, 503, 990, 1054, 2675, 3086
BmiI GGNNCC 6 cut(s) 111, 168, 258, 504, 2619, 2677
BmrI ACTGGG 1 cut(s) 2879
BmsI GCATC 4 cut(s) 179, 1091, 1216, 2056
BmtI GCTAGC 1 cut(s) 1655
BmuI ACTGGG 1 cut(s) 2879
BpiI GAAGAC 1 cut(s) 432
Bpu10I CCTNAGC 3 cut(s) 317, 939, 2691
Bpu1102I GCTNAGC 1 cut(s) 612
BpuEI CTTGAG 3 cut(s) 2062, 2388, 2779
BpuMI CCSGG 3 cut(s) 1293, 1567, 3176
BsaAI YACGTR 1 cut(s) 230
BsaHI GRCGYC 1 cut(s) 110
BsaI GGTCTC 2 cut(s) 2189, 2814
BsaJI CCNNGG 8 cut(s) 249, 581, 1090, 1878, 2061, 2786, 2891, 3174
BsaWI WCCGGW 1 cut(s) 1727
BsaXI ACNNNNNCTCC 2 cut(s) 2319, 2349
Bsc4I CCNNNNNNNGG 6 cut(s) 151, 692, 1364, 1433, 2113, 2154
Bse118I RCCGGY 1 cut(s) 1727
Bse3DI GCAATG 2 cut(s) 2243, 3154
BseBI CCWGG 7 cut(s) 438, 582, 1713, 2033, 2063, 2114, 2155
BseDI CCNNGG 8 cut(s) 249, 581, 1090, 1878, 2061, 2786, 2891, 3174
BseLI CCNNNNNNNGG 6 cut(s) 151, 692, 1364, 1433, 2113, 2154
BseMI GCAATG 2 cut(s) 2243, 3154
BseRI GAGGAG 2 cut(s) 203, 305
BseSI GKGCMC 1 cut(s) 3042
BseYI CCCAGC 2 cut(s) 1381, 1976
BsgI GTGCAG 3 cut(s) 1584, 1830, 1959
Bsh1236I CGCG 1 cut(s) 151
BshFI GGCC 8 cut(s) 169, 195, 505, 937, 2117, 2736, 3087, 3138
BshNI GGYRCC 1 cut(s) 109
BshTI ACCGGT 1 cut(s) 1727
BsiHKAI GWGCWC 2 cut(s) 2239, 2848
BsiSI CCGG 4 cut(s) 1292, 1566, 1728, 3176
BslFI GGGAC 3 cut(s) 598, 668, 2661
BslI CCNNNNNNNGG 6 cut(s) 151, 692, 1364, 1433, 2113, 2154
BsmAI GTCTC 7 cut(s) 67, 317, 348, 357, 2189, 2397, 2814
BsmBI CGTCTC 3 cut(s) 317, 357, 2397
BsmFI GGGAC 3 cut(s) 598, 668, 2661
BsmI GAATGC 3 cut(s) 2209, 3016, 3204
BsnI GGCC 8 cut(s) 169, 195, 505, 937, 2117, 2736, 3087, 3138
Bso31I GGTCTC 2 cut(s) 2189, 2814
Bsp1286I GDGCHC 3 cut(s) 2239, 2848, 3042
Bsp1720I GCTNAGC 1 cut(s) 612
BspACI CCGC 9 cut(s) 151, 164, 192, 254, 557, 623, 2168, 2265, 2600
BspANI GGCC 8 cut(s) 169, 195, 505, 937, 2117, 2736, 3087, 3138
BspFNI CGCG 1 cut(s) 151
BspLI GGNNCC 6 cut(s) 111, 168, 258, 504, 2619, 2677
BspMAI CTGCAG 1 cut(s) 886
BspMI ACCTGC 2 cut(s) 29, 1847
BspOI GCTAGC 1 cut(s) 1655
BspPI GGATC 6 cut(s) 448, 548, 1349, 1967, 2981, 3072
BspT107I GGYRCC 1 cut(s) 109
BspTNI GGTCTC 2 cut(s) 2189, 2814
BsrDI GCAATG 2 cut(s) 2243, 3154
BsrFI RCCGGY 1 cut(s) 1727
BssAI RCCGGY 1 cut(s) 1727
BssECI CCNNGG 8 cut(s) 249, 581, 1090, 1878, 2061, 2786, 2891, 3174
BssNAI GTATAC 1 cut(s) 2477
BssNI GRCGYC 1 cut(s) 110
BssT1I CCWWGG 2 cut(s) 1090, 1878
Bst1107I GTATAC 1 cut(s) 2477
Bst2UI CCWGG 7 cut(s) 438, 582, 1713, 2033, 2063, 2114, 2155
Bst6I CTCTTC 2 cut(s) 2506, 2778
BstACI GRCGYC 1 cut(s) 110
BstAPI GCANNNNNTGC 2 cut(s) 386, 1607
BstBAI YACGTR 1 cut(s) 230
BstC8I GCNNGC 6 cut(s) 153, 157, 246, 1649, 1653, 3161
BstDSI CCRYGG 2 cut(s) 249, 2891
BstENI CCTNNNNNAGG 1 cut(s) 2111
BstFNI CGCG 1 cut(s) 151
BstH2I RGCGCY 2 cut(s) 113, 294
BstHHI GCGC 4 cut(s) 112, 151, 236, 293
BstMAI GTCTC 7 cut(s) 67, 317, 348, 357, 2189, 2397, 2814
BstMWI GCNNNNNNNGC 9 cut(s) 161, 231, 290, 386, 556, 622, 1607, 2234, 3054
BstNI CCWGG 7 cut(s) 438, 582, 1713, 2033, 2063, 2114, 2155
BstNSI RCATGY 1 cut(s) 1830
BstSFI CTRYAG 2 cut(s) 882, 1701
BstSLI GKGCMC 1 cut(s) 3042
BstUI CGCG 1 cut(s) 151
BstV2I GAAGAC 1 cut(s) 432
BstX2I RGATCY 4 cut(s) 440, 553, 1340, 3064
BstYI RGATCY 4 cut(s) 440, 553, 1340, 3064
BstZ17I GTATAC 1 cut(s) 2477
BsuRI GGCC 8 cut(s) 169, 195, 505, 937, 2117, 2736, 3087, 3138
BtgI CCRYGG 2 cut(s) 249, 2891
BtgZI GCGATG 3 cut(s) 202, 1347, 2295
BtsI GCAGTG 1 cut(s) 2741
BveI ACCTGC 2 cut(s) 29, 1847
Cac8I GCNNGC 6 cut(s) 153, 157, 246, 1649, 1653, 3161
CfoI GCGC 4 cut(s) 112, 151, 236, 293
Cfr10I RCCGGY 1 cut(s) 1727
Cfr13I GGNCC 8 cut(s) 167, 194, 256, 503, 990, 1054, 2675, 3086
CsiI ACCWGGT 1 cut(s) 2153
Csp6I GTAC 8 cut(s) 84, 396, 519, 1485, 1959, 2355, 2643, 2993
CspAI ACCGGT 1 cut(s) 1727
CviAII CATG 9 cut(s) 80, 422, 547, 987, 1300, 1827, 1967, 3149, 3201
CviQI GTAC 8 cut(s) 84, 396, 519, 1485, 1959, 2355, 2643, 2993
DinI GGCGCC 1 cut(s) 111
DraIII CACNNNGTG 1 cut(s) 386
DrdI GACNNNNNNGTC 1 cut(s) 2389
DseDI GACNNNNNNGTC 1 cut(s) 2389
EaeI YGGCCR 2 cut(s) 2734, 3136
Eam1104I CTCTTC 2 cut(s) 2506, 2778
EarI CTCTTC 2 cut(s) 2506, 2778
EciI GGCGGA 2 cut(s) 269, 2157
Eco130I CCWWGG 2 cut(s) 1090, 1878
Eco147I AGGCCT 1 cut(s) 937
Eco31I GGTCTC 2 cut(s) 2189, 2814
Eco47I GGWCC 4 cut(s) 256, 990, 1054, 2675
Eco57I CTGAAG 2 cut(s) 1695, 2304
Eco72I CACGTG 1 cut(s) 230
EcoNI CCTNNNNNAGG 1 cut(s) 2111
EcoO109I RGGNCCY 1 cut(s) 503
EcoRI GAATTC 1 cut(s) 1634
EcoRII CCWGG 7 cut(s) 436, 580, 1711, 2031, 2061, 2112, 2153
EcoT14I CCWWGG 2 cut(s) 1090, 1878
EcoT22I ATGCAT 1 cut(s) 3206
EgeI GGCGCC 1 cut(s) 111
EheI GGCGCC 1 cut(s) 111
ErhI CCWWGG 2 cut(s) 1090, 1878
Esp3I CGTCTC 3 cut(s) 317, 357, 2397
FaeI CATG 9 cut(s) 83, 425, 550, 990, 1303, 1830, 1970, 3152, 3204
FalI AAGNNNNNCTT 4 cut(s) 29, 61, 1531, 1563
FaqI GGGAC 3 cut(s) 598, 668, 2661
FatI CATG 9 cut(s) 79, 421, 546, 986, 1299, 1826, 1966, 3148, 3200
FauI CCCGC 3 cut(s) 144, 157, 2607
FauNDI CATATG 1 cut(s) 1524
FblI GTMKAC 2 cut(s) 1492, 2476
FspBI CTAG 5 cut(s) 560, 1415, 1652, 1656, 1776
GlaI GCGC 4 cut(s) 111, 150, 235, 292
GsaI CCCAGC 2 cut(s) 1385, 1980
HaeII RGCGCY 2 cut(s) 113, 294
HaeIII GGCC 8 cut(s) 169, 195, 505, 937, 2117, 2736, 3087, 3138
HapII CCGG 4 cut(s) 1292, 1566, 1728, 3176
HhaI GCGC 4 cut(s) 112, 151, 236, 293
Hin1I GRCGYC 1 cut(s) 110
Hin1II CATG 9 cut(s) 83, 425, 550, 990, 1303, 1830, 1970, 3152, 3204
Hin6I GCGC 4 cut(s) 110, 149, 234, 291
HinP1I GCGC 4 cut(s) 110, 149, 234, 291
HincII GTYRAC 1 cut(s) 511
HindII GTYRAC 1 cut(s) 511
HinfI GANTC 9 cut(s) 41, 205, 268, 676, 740, 790, 1142, 1430, 1529
HpaI GTTAAC 1 cut(s) 511
HpaII CCGG 4 cut(s) 1292, 1566, 1728, 3176
Hpy166II GTNNAC 5 cut(s) 511, 993, 1180, 1493, 2477
Hpy8I GTNNAC 5 cut(s) 511, 993, 1180, 1493, 2477
Hpy99I CGWCG 1 cut(s) 352
HpyCH4IV ACGT 2 cut(s) 229, 596
HpyF10VI GCNNNNNNNGC 9 cut(s) 161, 231, 290, 386, 556, 622, 1607, 2234, 3054
HpySE526I ACGT 2 cut(s) 229, 596
Hsp92I GRCGYC 1 cut(s) 110
Hsp92II CATG 9 cut(s) 83, 425, 550, 990, 1303, 1830, 1970, 3152, 3204
HspAI GCGC 4 cut(s) 110, 149, 234, 291
KasI GGCGCC 1 cut(s) 109
KspAI GTTAAC 1 cut(s) 511
LmnI GCTCC 8 cut(s) 216, 530, 2029, 2212, 2242, 2452, 2851, 2962
LweI GCATC 4 cut(s) 179, 1091, 1216, 2056
MabI ACCWGGT 1 cut(s) 2153
MaeI CTAG 5 cut(s) 560, 1415, 1652, 1656, 1776
MaeII ACGT 2 cut(s) 229, 596
MaeIII GTNAC 4 cut(s) 140, 665, 1832, 2938
MfeI CAATTG 1 cut(s) 3114
MflI RGATCY 4 cut(s) 440, 553, 1340, 3064
MhlI GDGCHC 3 cut(s) 2239, 2848, 3042
MlsI TGGCCA 1 cut(s) 3138
MluNI TGGCCA 1 cut(s) 3138
Mly113I GGCGCC 1 cut(s) 110
MmeI TCCRAC 6 cut(s) 241, 508, 1766, 1768, 1897, 2242
Mox20I TGGCCA 1 cut(s) 3138
Mph1103I ATGCAT 1 cut(s) 3206
MroXI GAANNNNTTC 2 cut(s) 1574, 1866
MscI TGGCCA 1 cut(s) 3138
MseI TTAA 8 cut(s) 15, 510, 636, 890, 1755, 1800, 1929, 2952
MslI CAYNNNNRTG 1 cut(s) 980
Msp20I TGGCCA 1 cut(s) 3138
MspA1I CMGCKG 4 cut(s) 625, 881, 1385, 1814
MspI CCGG 4 cut(s) 1292, 1566, 1728, 3176
MunI CAATTG 1 cut(s) 3114
Mva1269I GAATGC 3 cut(s) 2209, 3016, 3204
MvaI CCWGG 7 cut(s) 438, 582, 1713, 2033, 2063, 2114, 2155
MvnI CGCG 1 cut(s) 151
MwoI GCNNNNNNNGC 9 cut(s) 161, 231, 290, 386, 556, 622, 1607, 2234, 3054
NarI GGCGCC 1 cut(s) 110
NciI CCSGG 3 cut(s) 1293, 1567, 3176
NdeI CATATG 1 cut(s) 1524
NheI GCTAGC 1 cut(s) 1651
NlaIII CATG 9 cut(s) 83, 425, 550, 990, 1303, 1830, 1970, 3152, 3204
NlaIV GGNNCC 6 cut(s) 111, 168, 258, 504, 2619, 2677
NmuCI GTSAC 2 cut(s) 140, 2938
NsiI ATGCAT 1 cut(s) 3206
NspI RCATGY 1 cut(s) 1830
PaqCI CACCTGC 1 cut(s) 1847
PceI AGGCCT 1 cut(s) 937
PctI GAATGC 3 cut(s) 2209, 3016, 3204
PdmI GAANNNNTTC 2 cut(s) 1574, 1866
PfeI GAWTC 9 cut(s) 41, 205, 268, 676, 740, 790, 1142, 1430, 1529
PflFI GACNNNGTC 1 cut(s) 2155
PfoI TCCNGGA 3 cut(s) 1565, 1711, 2031
PinAI ACCGGT 1 cut(s) 1727
PluTI GGCGCC 1 cut(s) 113
PmaCI CACGTG 1 cut(s) 230
PmlI CACGTG 1 cut(s) 230
Ppu21I YACGTR 1 cut(s) 230
Psp6I CCWGG 7 cut(s) 436, 580, 1711, 2031, 2061, 2112, 2153
PspCI CACGTG 1 cut(s) 230
PspFI CCCAGC 2 cut(s) 1381, 1976
PspGI CCWGG 7 cut(s) 436, 580, 1711, 2031, 2061, 2112, 2153
PspN4I GGNNCC 6 cut(s) 111, 168, 258, 504, 2619, 2677
PspPI GGNCC 8 cut(s) 167, 194, 256, 503, 990, 1054, 2675, 3086
PstI CTGCAG 1 cut(s) 886
PsuI RGATCY 4 cut(s) 440, 553, 1340, 3064
PsyI GACNNNGTC 1 cut(s) 2155
PvuII CAGCTG 3 cut(s) 881, 1385, 1814
RsaI GTAC 8 cut(s) 85, 397, 520, 1486, 1960, 2356, 2644, 2994
RsaNI GTAC 8 cut(s) 84, 396, 519, 1485, 1959, 2355, 2643, 2993
RseI CAYNNNNRTG 1 cut(s) 980
SaqAI TTAA 8 cut(s) 15, 510, 636, 890, 1755, 1800, 1929, 2952
Sau96I GGNCC 8 cut(s) 167, 194, 256, 503, 990, 1054, 2675, 3086
ScaI AGTACT 5 cut(s) 520, 1486, 2356, 2644, 2994
SduI GDGCHC 3 cut(s) 2239, 2848, 3042
SexAI ACCWGGT 1 cut(s) 2153
SfaNI GCATC 4 cut(s) 179, 1091, 1216, 2056
SfcI CTRYAG 2 cut(s) 882, 1701
SfoI GGCGCC 1 cut(s) 111
SinI GGWCC 4 cut(s) 256, 990, 1054, 2675
SmiMI CAYNNNNRTG 1 cut(s) 980
SmlI CTYRAG 3 cut(s) 2077, 2403, 2758
SmoI CTYRAG 3 cut(s) 2077, 2403, 2758
SseBI AGGCCT 1 cut(s) 937
SsiI CCGC 9 cut(s) 151, 164, 192, 254, 557, 623, 2168, 2265, 2600
SspDI GGCGCC 1 cut(s) 109
SspI AATATT 1 cut(s) 2000
SspMI CTAG 5 cut(s) 560, 1415, 1652, 1656, 1776
StuI AGGCCT 1 cut(s) 937
StyI CCWWGG 2 cut(s) 1090, 1878
TaiI ACGT 2 cut(s) 232, 599
TaqI TCGA 5 cut(s) 416, 1169, 1904, 2083, 2539
TatI WGTACW 5 cut(s) 518, 1484, 2354, 2642, 2992
TauI GCSGC 2 cut(s) 195, 625
TfiI GAWTC 9 cut(s) 41, 205, 268, 676, 740, 790, 1142, 1430, 1529
Tru1I TTAA 8 cut(s) 15, 510, 636, 890, 1755, 1800, 1929, 2952
Tru9I TTAA 8 cut(s) 15, 510, 636, 890, 1755, 1800, 1929, 2952
TseFI GTSAC 2 cut(s) 140, 2938
Tsp45I GTSAC 2 cut(s) 140, 2938
TspGWI ACGGA 3 cut(s) 299, 336, 2908
Tth111I GACNNNGTC 1 cut(s) 2155
VpaK11BI GGWCC 4 cut(s) 256, 990, 1054, 2675
XagI CCTNNNNNAGG 1 cut(s) 2111
XapI RAATTY 3 cut(s) 1634, 1866, 2837
XceI RCATGY 1 cut(s) 1830
XmiI GTMKAC 2 cut(s) 1492, 2476
XmnI GAANNNNTTC 2 cut(s) 1574, 1866
XspI CTAG 5 cut(s) 560, 1415, 1652, 1656, 1776
ZrmI AGTACT 5 cut(s) 520, 1486, 2356, 2644, 2994
Zsp2I ATGCAT 1 cut(s) 3206
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.