Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0015862

Physical Location & Seq

Genomic Coordinates Reverse (-)

47435740 .. 47440559

Gene Structure 4820 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0371900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1173 bp

ATGTTCATCACCCCCACCCTCAGCATCTCTTGTATAACTTGCATGCGGGGAGAGGAAGGTTCTAGCGTTAATGAGCTTTCAGGCCGCGGTGGTGGGAAGAACAACAGCTCAGTACGGACGTCGGAACTCTACGGAGGGTTAACTAGTGGAAGTCCTTGGGATGATGGAATCTATGATGGCGTCAGAGAAATCACTCTGGTTTATGGCCAGTGCATCGACTCCATTAGTGTGGCATATGATAAAGATGGTCAGTTTGTTAAACCCGGAAAGCATGGAGGTGTCGGGGGCGGTCACCTCCATAAGCCCCTAACTACTGTCGAGATGAAACTGGAGTATCCAGAAGAGTTCCTAGTTGGCGTCAGTGGATACTCTTGTTCGGTACCCGGGATGGCACCAGAAGTGTTGCGATCACTCAAACTTGAGAGCAATAGAAGGTCATTTGGACCGTTTGGAGTTTTAGTAGGCAATCCCTTTAGTTTCAGAGTACAAGATGGAGAACAAATTGTTGGCTTAAAGGGAAGAAATGGTTGGTACCTAGATGCAATTGGGTTTCATATATCCCCTGCTCCCAAGAGTAAACTCTTTCGGAGAGTTCAACAGAGCTCGATACCGTCGGAACTTTATGGAGGAGTGGCCGGCGGAGGTCCTTGGGATGACGGAGTCTACGATGGCGTAAGAGAAATAACACTTGTTTATGGCCAATGCATCGACTCCATATGTGTGGCATATGATATTAATGGTAAGCTTGTTAAAACCGGAAAGCATGGAGGTTATGGGGGCTATCACCTCCACAAAAACCTAAGTATCGTTGAGATAAAGTTGGAATACCCAAGTGAGTTTCTAGTTAGTGTCAGTGGATACTCTTCTTCTGTATCCGGGATGGCACCCGAGGTGTTACGCTCACTCAAATTTGAGACCAACAAAAGGTCATATGGACCATTTGGAGTTGAAATAGGCACACCATTTACATTCAGAGTAAAAGATGGAGAGAAAATTGTTGGTTTGAAGGGAAGAAATGGTTGGTACCTAGATGCAATCGGGTTTCATATATCCTATGCTCACAAGAGAAAACGCTTTCGGATAGTTCGGAAGCATCTTGCCAAAGCTTATGAGTCCTTGGTTCAAATCACTAAACCTCTTACAAATGTTGAGTGCACATTAATAAGCTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000154 GO:0000494 GO:0001510 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0005732 GO:0006139 GO:0006325 GO:0006364 GO:0006396 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008173 GO:0008213 GO:0008276 GO:0008649 GO:0008757 GO:0009451 GO:0009987 GO:0010467 GO:0015030 GO:0016043 GO:0016070 GO:0016072 GO:0016074 GO:0016569 GO:0016570 GO:0016571 GO:0016592 GO:0016604 GO:0016740 GO:0016741 GO:0016787 GO:0016788 GO:0018364 GO:0019538 GO:0022613 GO:0030515 GO:0030684 GO:0031123 GO:0031126 GO:0031167 GO:0031428 GO:0031974 GO:0031981 GO:0032040 GO:0032259 GO:0032991 GO:0033967 GO:0034470 GO:0034641 GO:0034660 GO:0034963 GO:0036009 GO:0036211 GO:0042054 GO:0042254 GO:0043144 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0043628 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044452 GO:0044464 GO:0046483 GO:0051276 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0097159 GO:0140096 GO:0140098 GO:0140102 GO:1901360 GO:1901363 GO:1901564 GO:1990258 GO:1990259 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

Fibrillarin

Protein Analysis

390

Amino Acids

42.52

Weight (kDa)

8.87

Isoelectric Point (pI)

45.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Jacalin	PF01419	43 - 185	6.1e-34	Jacalin-like lectin domain
Jacalin	PF01419	206 - 349	5.5e-39	Jacalin-like lectin domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015862)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52470
fragaria_vesca	FvH4_7g30020
rosa_chinensis	RchiOBHm_Chr1g0377981
rosa_laevigata	RLG00000026480
rosa_multiflora	Rmu_sc0002068.1_g000004
rosa_roxburghii	Rroxscaffold_156G00440430 Rroxscaffold_4G00280860
rosa_rugosa	Rorug01G0406000 Rorug01G0406000 Rorug02G0371900
rosa_samantha	Rh1AG425300 Rh1BG384000 Rh1CG397800 Rh1DG415300
rosa_wichuraiana	Rw1G037300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	122
Acc65I	GGTACC	3 cut(s)	379, 531, 1023
AccB1I	GGYRCC	5 cut(s)	379, 391, 531, 883, 1023
AccI	GTMKAC	1 cut(s)	663
AccII	CGCG	1 cut(s)	87
AciI	CCGC	5 cut(s)	46, 85, 87, 288, 639
AcoI	YGGCCR	3 cut(s)	205, 633, 697
AcsI	RAATTY	1 cut(s)	908
AcyI	GRCGYC	3 cut(s)	119, 180, 357
AfaI	GTAC	5 cut(s)	114, 381, 486, 533, 1025
AfiI	CCNNNNNNNGG	1 cut(s)	924
AgsI	TTSAA	4 cut(s)	596, 950, 1006, 1124
AhlI	ACTAGT	1 cut(s)	143
AjuI	GAANNNNNNNTTGG	6 cut(s)	489, 511, 521, 543, 1003, 1035
AluBI	AGCT	6 cut(s)	76, 108, 603, 745, 1106, 1167
AluI	AGCT	6 cut(s)	76, 108, 603, 745, 1106, 1167
Alw21I	GWGCWC	2 cut(s)	605, 1157
Alw26I	GTCTC	1 cut(s)	908
Alw44I	GTGCAC	1 cut(s)	1153
Ama87I	CYCGRG	2 cut(s)	383, 887
AoxI	GGCC	4 cut(s)	82, 205, 633, 697
ApaLI	GTGCAC	1 cut(s)	1153
ApoI	RAATTY	1 cut(s)	908
AseI	ATTAAT	2 cut(s)	735, 1160
Asp718I	GGTACC	3 cut(s)	379, 531, 1023
AspS9I	GGNCC	3 cut(s)	443, 644, 935
AsuC2I	CCSGG	4 cut(s)	264, 384, 385, 877
AsuHPI	GGTGA	2 cut(s)	284, 776
AvaI	CYCGRG	2 cut(s)	383, 887
AvaII	GGWCC	3 cut(s)	443, 644, 935
BaeGI	GKGCMC	1 cut(s)	1157
BaeI	ACNNNNGTAYC	6 cut(s)	317, 350, 358, 391, 787, 820
BalI	TGGCCA	2 cut(s)	207, 699
BanI	GGYRCC	5 cut(s)	379, 391, 531, 883, 1023
BanII	GRGCYC	1 cut(s)	605
Bbv12I	GWGCWC	2 cut(s)	605, 1157
BbvCI	CCTCAGC	1 cut(s)	20
BccI	CCATC	8 cut(s)	158, 170, 239, 382, 485, 662, 874, 977
BciVI	GTATCC	4 cut(s)	345, 359, 851, 883
BcnI	CCSGG	4 cut(s)	264, 384, 385, 877
BcoDI	GTCTC	1 cut(s)	908
BcuI	ACTAGT	1 cut(s)	143
BfaI	CTAG	6 cut(s)	63, 144, 350, 536, 842, 1028
BfuI	GTATCC	4 cut(s)	345, 359, 851, 883
BisI	GCNGC	1 cut(s)	85
BlsI	GCNGC	1 cut(s)	86
Bme1390I	CCNGG	4 cut(s)	264, 384, 385, 877
Bme18I	GGWCC	3 cut(s)	443, 644, 935
BmeT110I	CYCGRG	2 cut(s)	383, 887
BmgT120I	GGNCC	3 cut(s)	443, 644, 935
BmiI	GGNNCC	5 cut(s)	381, 393, 533, 885, 1025
BmrFI	CCNGG	4 cut(s)	264, 384, 385, 877
BmsI	GCATC	6 cut(s)	33, 222, 529, 714, 1021, 1102
BpmI	CTGGAG	1 cut(s)	350
Bpu10I	CCTNAGC	1 cut(s)	20
BpuEI	CTTGAG	1 cut(s)	440
BpuMI	CCSGG	4 cut(s)	264, 384, 385, 877
BsaHI	GRCGYC	3 cut(s)	119, 180, 357
BsaI	GGTCTC	1 cut(s)	908
BsaJI	CCNNGG	6 cut(s)	85, 155, 383, 647, 888, 1116
BsaWI	WCCGGW	1 cut(s)	755
BsaXI	ACNNNNNCTCC	2 cut(s)	444, 474
Bsc4I	CCNNNNNNNGG	1 cut(s)	924
Bse118I	RCCGGY	1 cut(s)	635
Bse1I	ACTGG	2 cut(s)	208, 333
BseDI	CCNNGG	6 cut(s)	85, 155, 383, 647, 888, 1116
BseGI	GGATG	4 cut(s)	166, 393, 658, 885
BseLI	CCNNNNNNNGG	1 cut(s)	924
BseMII	CTCAG	2 cut(s)	34, 123
BseNI	ACTGG	2 cut(s)	208, 333
BseRI	GAGGAG	1 cut(s)	642
BseSI	GKGCMC	1 cut(s)	1157
Bsh1236I	CGCG	1 cut(s)	87
BshFI	GGCC	4 cut(s)	84, 207, 635, 699
BshNI	GGYRCC	5 cut(s)	379, 391, 531, 883, 1023
BsiHKAI	GWGCWC	2 cut(s)	605, 1157
BsiHKCI	CYCGRG	2 cut(s)	383, 887
BsiSI	CCGG	5 cut(s)	264, 384, 636, 756, 876
BslI	CCNNNNNNNGG	1 cut(s)	924
BsmAI	GTCTC	1 cut(s)	908
BsnI	GGCC	4 cut(s)	84, 207, 635, 699
Bso31I	GGTCTC	1 cut(s)	908
BsoBI	CYCGRG	2 cut(s)	383, 887
Bsp1286I	GDGCHC	2 cut(s)	605, 1157
Bsp143I	GATC	1 cut(s)	407
BspACI	CCGC	5 cut(s)	46, 85, 87, 288, 639
BspANI	GGCC	4 cut(s)	84, 207, 635, 699
BspCNI	CTCAG	2 cut(s)	33, 122
BspFNI	CGCG	1 cut(s)	87
BspLI	GGNNCC	5 cut(s)	381, 393, 533, 885, 1025
BspT107I	GGYRCC	5 cut(s)	379, 391, 531, 883, 1023
BspTNI	GGTCTC	1 cut(s)	908
BsrFI	RCCGGY	1 cut(s)	635
BsrI	ACTGG	2 cut(s)	208, 333
BssAI	RCCGGY	1 cut(s)	635
BssECI	CCNNGG	6 cut(s)	85, 155, 383, 647, 888, 1116
BssMI	GATC	1 cut(s)	407
BssNI	GRCGYC	3 cut(s)	119, 180, 357
BssT1I	CCWWGG	3 cut(s)	155, 647, 1116
Bst4CI	ACNGT	3 cut(s)	316, 447, 612
Bst6I	CTCTTC	2 cut(s)	336, 868
BstACI	GRCGYC	3 cut(s)	119, 180, 357
BstC8I	GCNNGC	2 cut(s)	44, 637
BstDEI	CTNAG	3 cut(s)	20, 109, 800
BstDSI	CCRYGG	1 cut(s)	85
BstEII	GGTNACC	1 cut(s)	290
BstF5I	GGATG	4 cut(s)	166, 393, 658, 885
BstFNI	CGCG	1 cut(s)	87
BstKTI	GATC	1 cut(s)	410
BstMAI	GTCTC	1 cut(s)	908
BstMBI	GATC	1 cut(s)	407
BstNSI	RCATGY	1 cut(s)	46
BstPI	GGTNACC	1 cut(s)	290
BstSCI	CCNGG	4 cut(s)	262, 382, 383, 875
BstSLI	GKGCMC	1 cut(s)	1157
BstUI	CGCG	1 cut(s)	87
BstXI	CCANNNNNNTGG	2 cut(s)	229, 721
BsuI	GTATCC	4 cut(s)	345, 359, 851, 883
BsuRI	GGCC	4 cut(s)	84, 207, 635, 699
BtgI	CCRYGG	1 cut(s)	85
BtsCI	GGATG	4 cut(s)	166, 393, 658, 885
BtsIMutI	CAGTG	3 cut(s)	215, 367, 859
Cac8I	GCNNGC	2 cut(s)	44, 637
Cfr10I	RCCGGY	1 cut(s)	635
Cfr13I	GGNCC	3 cut(s)	443, 644, 935
Cfr42I	CCGCGG	1 cut(s)	88
Cfr9I	CCCGGG	1 cut(s)	383
CseI	GACGC	2 cut(s)	169, 346
Csp6I	GTAC	5 cut(s)	113, 380, 485, 532, 1024
CviAII	CATG	3 cut(s)	43, 272, 764
CviQI	GTAC	5 cut(s)	113, 380, 485, 532, 1024
DdeI	CTNAG	3 cut(s)	20, 109, 800
DpnI	GATC	1 cut(s)	409
DpnII	GATC	1 cut(s)	407
EaeI	YGGCCR	3 cut(s)	205, 633, 697
Eam1104I	CTCTTC	2 cut(s)	336, 868
EarI	CTCTTC	2 cut(s)	336, 868
EciI	GGCGGA	1 cut(s)	654
Ecl136II	GAGCTC	1 cut(s)	603
Eco130I	CCWWGG	3 cut(s)	155, 647, 1116
Eco24I	GRGCYC	1 cut(s)	605
Eco31I	GGTCTC	1 cut(s)	908
Eco47I	GGWCC	3 cut(s)	443, 644, 935
Eco53kI	GAGCTC	1 cut(s)	603
Eco88I	CYCGRG	2 cut(s)	383, 887
Eco91I	GGTNACC	1 cut(s)	290
EcoICRI	GAGCTC	1 cut(s)	603
EcoO109I	RGGNCCY	1 cut(s)	644
EcoO65I	GGTNACC	1 cut(s)	290
EcoT14I	CCWWGG	3 cut(s)	155, 647, 1116
EcoT22I	ATGCAT	1 cut(s)	707
EcoT38I	GRGCYC	1 cut(s)	605
ErhI	CCWWGG	3 cut(s)	155, 647, 1116
FaeI	CATG	3 cut(s)	46, 275, 767
FatI	CATG	3 cut(s)	42, 271, 763
FauI	CCCGC	1 cut(s)	39
FauNDI	CATATG	4 cut(s)	235, 716, 727, 931
FblI	GTMKAC	1 cut(s)	663
Fnu4HI	GCNGC	1 cut(s)	85
FokI	GGATG	4 cut(s)	173, 400, 665, 892
FriOI	GRGCYC	1 cut(s)	605
Fsp4HI	GCNGC	1 cut(s)	85
FspBI	CTAG	6 cut(s)	63, 144, 350, 536, 842, 1028
GluI	GCNGC	1 cut(s)	85
GsuI	CTGGAG	1 cut(s)	350
HaeIII	GGCC	4 cut(s)	84, 207, 635, 699
HapII	CCGG	5 cut(s)	264, 384, 636, 756, 876
HgaI	GACGC	2 cut(s)	169, 346
Hin1I	GRCGYC	3 cut(s)	119, 180, 357
Hin1II	CATG	3 cut(s)	46, 275, 767
HincII	GTYRAC	1 cut(s)	141
HindII	GTYRAC	1 cut(s)	141
HindIII	AAGCTT	3 cut(s)	743, 1104, 1165
HinfI	GANTC	5 cut(s)	168, 218, 660, 710, 1112
HpaI	GTTAAC	1 cut(s)	141
HpaII	CCGG	5 cut(s)	264, 384, 636, 756, 876
HphI	GGTGA	2 cut(s)	284, 776
Hpy166II	GTNNAC	4 cut(s)	141, 578, 664, 1155
Hpy188I	TCNGA	8 cut(s)	124, 185, 482, 588, 616, 974, 1080, 1089
Hpy188III	TCNNGA	2 cut(s)	319, 338
Hpy8I	GTNNAC	4 cut(s)	141, 578, 664, 1155
Hpy99I	CGWCG	2 cut(s)	124, 616
HpyAV	CCTTC	3 cut(s)	50, 426, 1000
HpyCH4III	ACNGT	3 cut(s)	316, 447, 612
HpyCH4IV	ACGT	1 cut(s)	119
HpyCH4V	TGCA	6 cut(s)	42, 213, 542, 705, 1034, 1155
HpyF3I	CTNAG	3 cut(s)	20, 109, 800
HpySE526I	ACGT	1 cut(s)	119
Hsp92I	GRCGYC	3 cut(s)	119, 180, 357
Hsp92II	CATG	3 cut(s)	46, 275, 767
KpnI	GGTACC	3 cut(s)	383, 535, 1027
KroI	GCCGGC	1 cut(s)	635
KroNI	GCCGGC	1 cut(s)	637
KspAI	GTTAAC	1 cut(s)	141
KspI	CCGCGG	1 cut(s)	88
Kzo9I	GATC	1 cut(s)	407
LmnI	GCTCC	1 cut(s)	571
LweI	GCATC	6 cut(s)	33, 222, 529, 714, 1021, 1102
MaeI	CTAG	6 cut(s)	63, 144, 350, 536, 842, 1028
MaeII	ACGT	1 cut(s)	119
MaeIII	GTNAC	2 cut(s)	290, 894
MalI	GATC	1 cut(s)	409
MboI	GATC	1 cut(s)	407
MboII	GAAGA	6 cut(s)	109, 353, 531, 855, 858, 1023
MfeI	CAATTG	1 cut(s)	543
MhlI	GDGCHC	2 cut(s)	605, 1157
MlsI	TGGCCA	2 cut(s)	207, 699
MluCI	AATT	4 cut(s)	501, 543, 908, 993
MluNI	TGGCCA	2 cut(s)	207, 699
MlyI	GAGTC	4 cut(s)	212, 669, 704, 1121
MmeI	TCCRAC	3 cut(s)	102, 594, 801
Mox20I	TGGCCA	2 cut(s)	207, 699
Mph1103I	ATGCAT	1 cut(s)	707
MroNI	GCCGGC	1 cut(s)	635
MscI	TGGCCA	2 cut(s)	207, 699
MseI	TTAA	7 cut(s)	69, 140, 258, 512, 735, 750, 1160
MslI	CAYNNNNRTG	3 cut(s)	227, 276, 719
Msp20I	TGGCCA	2 cut(s)	207, 699
MspA1I	CMGCKG	1 cut(s)	87
MspI	CCGG	5 cut(s)	264, 384, 636, 756, 876
MspR9I	CCNGG	4 cut(s)	264, 384, 385, 877
MunI	CAATTG	1 cut(s)	543
MvnI	CGCG	1 cut(s)	87
NaeI	GCCGGC	1 cut(s)	637
NciI	CCSGG	4 cut(s)	264, 384, 385, 877
NdeI	CATATG	4 cut(s)	235, 716, 727, 931
NdeII	GATC	1 cut(s)	407
NgoMIV	GCCGGC	1 cut(s)	635
NlaIII	CATG	3 cut(s)	46, 275, 767
NlaIV	GGNNCC	5 cut(s)	381, 393, 533, 885, 1025
NmuCI	GTSAC	1 cut(s)	290
NsiI	ATGCAT	1 cut(s)	707
NspI	RCATGY	1 cut(s)	46
PaeI	GCATGC	1 cut(s)	46
PcsI	WCGNNNNNNNCGW	1 cut(s)	663
PdiI	GCCGGC	1 cut(s)	637
PfeI	GAWTC	1 cut(s)	168
PflFI	GACNNNGTC	1 cut(s)	659
PfoI	TCCNGGA	1 cut(s)	875
PkrI	GCNGC	1 cut(s)	86
PleI	GAGTC	4 cut(s)	212, 668, 704, 1120
PpsI	GAGTC	4 cut(s)	212, 668, 704, 1120
PpuMI	RGGWCCY	1 cut(s)	644
PshBI	ATTAAT	2 cut(s)	735, 1160
Psp124BI	GAGCTC	1 cut(s)	605
Psp5II	RGGWCCY	1 cut(s)	644
PspEI	GGTNACC	1 cut(s)	290
PspN4I	GGNNCC	5 cut(s)	381, 393, 533, 885, 1025
PspPI	GGNCC	3 cut(s)	443, 644, 935
PspPPI	RGGWCCY	1 cut(s)	644
PsyI	GACNNNGTC	1 cut(s)	659
RsaI	GTAC	5 cut(s)	114, 381, 486, 533, 1025
RsaNI	GTAC	5 cut(s)	113, 380, 485, 532, 1024
RseI	CAYNNNNRTG	3 cut(s)	227, 276, 719
SacI	GAGCTC	1 cut(s)	605
SacII	CCGCGG	1 cut(s)	88
SaqAI	TTAA	7 cut(s)	69, 140, 258, 512, 735, 750, 1160
SatI	GCNGC	1 cut(s)	85
Sau3AI	GATC	1 cut(s)	407
Sau96I	GGNCC	3 cut(s)	443, 644, 935
SchI	GAGTC	4 cut(s)	212, 669, 704, 1121
ScrFI	CCNGG	4 cut(s)	264, 384, 385, 877
SduI	GDGCHC	2 cut(s)	605, 1157
SfaNI	GCATC	6 cut(s)	33, 222, 529, 714, 1021, 1102
Sfr303I	CCGCGG	1 cut(s)	88
SgrBI	CCGCGG	1 cut(s)	88
SinI	GGWCC	3 cut(s)	443, 644, 935
SmaI	CCCGGG	1 cut(s)	385
SmiMI	CAYNNNNRTG	3 cut(s)	227, 276, 719
SmlI	CTYRAG	1 cut(s)	419
SmoI	CTYRAG	1 cut(s)	419
SpeI	ACTAGT	1 cut(s)	143
SphI	GCATGC	1 cut(s)	46
Sse9I	AATT	4 cut(s)	501, 543, 908, 993
SsiI	CCGC	5 cut(s)	46, 85, 87, 288, 639
SspMI	CTAG	6 cut(s)	63, 144, 350, 536, 842, 1028
SstI	GAGCTC	1 cut(s)	605
StyD4I	CCNGG	4 cut(s)	262, 382, 383, 875
StyI	CCWWGG	3 cut(s)	155, 647, 1116
TaaI	ACNGT	3 cut(s)	316, 447, 612
TaiI	ACGT	1 cut(s)	122
TaqI	TCGA	4 cut(s)	216, 318, 605, 708
TasI	AATT	4 cut(s)	501, 543, 908, 993
TatI	WGTACW	1 cut(s)	484
TauI	GCSGC	1 cut(s)	87
TfiI	GAWTC	1 cut(s)	168
Tru1I	TTAA	7 cut(s)	69, 140, 258, 512, 735, 750, 1160
Tru9I	TTAA	7 cut(s)	69, 140, 258, 512, 735, 750, 1160
TscAI	CASTG	3 cut(s)	215, 367, 859
TseFI	GTSAC	1 cut(s)	290
Tsp45I	GTSAC	1 cut(s)	290
TspDTI	ATGAA	3 cut(s)	338, 542, 1034
TspGWI	ACGGA	3 cut(s)	130, 147, 672
TspMI	CCCGGG	1 cut(s)	383
TspRI	CASTG	3 cut(s)	215, 367, 859
Tth111I	GACNNNGTC	1 cut(s)	659
VneI	GTGCAC	1 cut(s)	1153
VpaK11BI	GGWCC	3 cut(s)	443, 644, 935
VspI	ATTAAT	2 cut(s)	735, 1160
XapI	RAATTY	1 cut(s)	908
XceI	RCATGY	1 cut(s)	46
XmaI	CCCGGG	1 cut(s)	383
XmiI	GTMKAC	1 cut(s)	663
XspI	CTAG	6 cut(s)	63, 144, 350, 536, 842, 1028
ZraI	GACGTC	1 cut(s)	120
Zsp2I	ATGCAT	1 cut(s)	707

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.