Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0005080

Physical Location & Seq

Genomic Coordinates Forward (+)

49433663 .. 49436290

Gene Structure 2628 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0387400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1299 bp

ATGAAGAACAACCAAGAGTACTACTTGCAAGAATCCGTCACTTTCCCAGGGAAACCCTCCCCGTTCGCAGCAGAATGCTGGTTCGACGATGCTTGCATTCTCGACATGGACTACTTTGTCAAAACGCTAGCCGGAATTAAGGCCAAAGGCGTACGACCCGACCTCATCGGCTCAATTATCACCCACTACGCCTCCAAATGGCTTCCCGACCTCTTGGGTGATGTCTTCTCCGACCAAAAGAGCAGCCTGACCAACTTTGAGTCCTCCCCGGAAAGCGTTACAGCCTTGTGGATGAGAAAAAGGTTCTTCGTCGAAACCCTAGTCGGGGTTCTGCCTCCGGAGAAGGACTGCATCCCGTGCAACTTCCTCCTCCGGCTGCTAAGGACCGCCAACATGGTGGGGGTCGAGCCCTCTTATCGAGCAGAGCTGGAGAAGAGGATTTCGTGGCAGCTAGACCAAGCGTCACTAAAGGAACTCATGATTCCTTCTTTTAGTCACACGTGCGGGACATTATTGGACGTTGAACTTGTTATTAGGTTGGTGAAGAGGTTTGTGAACCTGGAGGAGTCTGCTGCTAAAAGTGGAGTTGCCATGGTGAAGGTGGCGAAGCTCGTGGATTGTTACCTTGCTGAGGCCGCTGTGGATGTGAATCTGAGCTTGCCGGAGTTTGCGGCCCTCGCTGGAGCTCTGCCTAGCCATGCTCGAGCCACAGATGATGGGTTATACCGAGCCATTGATACTTATCTCAAAGCACATCCTGGAGTATCCAAGCATGATCGCAAGAGTCTGTGTAGACTAATTGACAGTCGAAAGCTCTCCCCTGAGGCATCTCTTCATGCTGCTCAAAACGAACGCTTGCCGGTCCGAGCTGTAATCCAAGTCCTCTTCTCCGAGCAAACCAAGCTCCACAGAAACATCGACTGGAGTGGCTCGTTCAGCGGCAGTGCACGGAGCCCAAACCCCTTAGCAGATCCAGGCGCCGCCAGATGCCACTCAAAGCGAGACATGTCGAATCTGCATACGCAGATAAGGAGTTTGAAAGATGAGGTCCTTAGGCTGCAGAGCCAATGCAATTCAATGCAAATGCAGATGGAGAGGAAATCAAGGGAGAAAAAGAAAGGGGTTTTCAAGTGGAATGTTTTTGGAATACCTTCATTTAAGAGCGGGAGTGGTCTGGTGAGGATTAATGAGGGTGGAGAAGGGGAGGTTGGGTATGGGAAACAAACGCCAGCGATGGATATGAAGACCAAGTTGGTTAGAGGTAGAGTTACTCCGAAGTGGAGGAATTCTATGTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009628 GO:0009787 GO:0009788 GO:0009966 GO:0009968 GO:0009987 GO:0010035 GO:0010646 GO:0010648 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019538 GO:0022622 GO:0023051 GO:0023057 GO:0032501 GO:0032502 GO:0036211 GO:0042221 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0065007 GO:0071704 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

ko04016 ko04075 ko04931 map04016 map04075 map04931

Pfam Domains

Protein Families

PP2C

Protein Analysis

432

Amino Acids

48.27

Weight (kDa)

9.19

Isoelectric Point (pI)

38.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NPH3	PF03000	25 - 277	2.9e-83	NPH3 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005080)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17550 AT1G17550 AT1G72770 AT1G72770 AT1G72770 AT1G72770 AT1G72770
fragaria_vesca	FvH4_6g34170 FvH4_6g34170 FvH4_6g34170 FvH4_6g34170
malus_domestica	MD09G1188000.v1.1 MD17G1172400.v1.1
prunus_persica	Prupe.3G044900_v2.0.a1 Prupe.3G044900_v2.0.a1 Prupe.3G044900_v2.0.a1
pyrus_communis	pycom09g10440 pycom17g17010
rosa_chinensis	RchiOBHm_Chr2g0144521
rosa_laevigata	RLG00000020085
rosa_multiflora	Rmu_sc0005789.1_g000006 Rmu_sc0009947.1_g000001
rosa_roxburghii	Rroxscaffold_2G00101240
rosa_rugosa	Rorug02G0387400 Rorug02G0387500
rosa_samantha	Rh2AG439500 Rh2BG449600 Rh2CG426500 Rh2DG459500
rosa_wichuraiana	Rw2G035950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	116
AccB1I	GGYRCC	1 cut(s)	977
AccBSI	CCGCTC	1 cut(s)	1164
AccI	GTMKAC	1 cut(s)	793
AccIII	TCCGGA	1 cut(s)	337
AciI	CCGC	7 cut(s)	387, 504, 636, 671, 939, 981, 1164
AclWI	GGATC	1 cut(s)	965
AcsI	RAATTY	1 cut(s)	1285
AcvI	CACGTG	1 cut(s)	501
AcyI	GRCGYC	1 cut(s)	978
AfaI	GTAC	2 cut(s)	20, 153
AfiI	CCNNNNNNNGG	4 cut(s)	198, 324, 325, 631
AflIII	ACRYGT	2 cut(s)	498, 1005
AgsI	TTSAA	4 cut(s)	524, 1039, 1077, 1129
AhdI	GACNNNNNGTC	1 cut(s)	460
AjnI	CCWGG	4 cut(s)	46, 558, 757, 973
AjuI	GAANNNNNNNTTGG	4 cut(s)	1191, 1223, 1235, 1267
AluBI	AGCT	8 cut(s)	427, 451, 610, 657, 686, 814, 869, 904
AluI	AGCT	8 cut(s)	427, 451, 610, 657, 686, 814, 869, 904
Alw21I	GWGCWC	2 cut(s)	688, 949
Alw26I	GTCTC	1 cut(s)	996
Alw44I	GTGCAC	1 cut(s)	945
AlwI	GGATC	1 cut(s)	965
Ama87I	CYCGRG	1 cut(s)	702
Aor13HI	TCCGGA	1 cut(s)	337
AoxI	GGCC	3 cut(s)	141, 633, 672
ApaLI	GTGCAC	1 cut(s)	945
ApeKI	GCWGC	7 cut(s)	68, 243, 376, 448, 572, 839, 1057
ApoI	RAATTY	1 cut(s)	1285
ArsI	GACNNNNNNTTYG	2 cut(s)	306, 338
AseI	ATTAAT	1 cut(s)	1185
Asp700I	GAANNNNTTC	1 cut(s)	1150
AspLEI	GCGC	1 cut(s)	980
AspS9I	GGNCC	4 cut(s)	384, 673, 862, 1048
AsuC2I	CCSGG	1 cut(s)	269
AsuHPI	GGTGA	5 cut(s)	172, 230, 553, 607, 1189
AsuNHI	GCTAGC	1 cut(s)	127
AvaI	CYCGRG	1 cut(s)	702
AvaII	GGWCC	3 cut(s)	384, 862, 1048
AxyI	CCTNAGG	2 cut(s)	822, 1052
BaeGI	GKGCMC	1 cut(s)	949
BanI	GGYRCC	1 cut(s)	977
BanII	GRGCYC	3 cut(s)	411, 688, 956
BauI	CACGAG	1 cut(s)	611
BbrPI	CACGTG	1 cut(s)	501
BbsI	GAAGAC	2 cut(s)	217, 1250
Bbv12I	GWGCWC	2 cut(s)	688, 949
BbvCI	CCTCAGC	1 cut(s)	630
BbvI	GCAGC	7 cut(s)	80, 255, 363, 460, 559, 826, 1044
BccI	CCATC	3 cut(s)	710, 1084, 1228
BciT130I	CCWGG	4 cut(s)	48, 560, 759, 975
BciVI	GTATCC	1 cut(s)	775
BcnI	CCSGG	1 cut(s)	269
BcoDI	GTCTC	1 cut(s)	996
BfaI	CTAG	4 cut(s)	128, 320, 452, 693
BfmI	CTRYAG	1 cut(s)	1058
BfoI	RGCGCY	1 cut(s)	981
BfuI	GTATCC	1 cut(s)	775
BmcAI	AGTACT	1 cut(s)	20
Bme1390I	CCNGG	5 cut(s)	48, 269, 560, 759, 975
Bme18I	GGWCC	3 cut(s)	384, 862, 1048
BmeRI	GACNNNNNGTC	1 cut(s)	460
BmeT110I	CYCGRG	1 cut(s)	702
BmgT120I	GGNCC	4 cut(s)	384, 673, 862, 1048
BmiI	GGNNCC	2 cut(s)	953, 979
BmrFI	CCNGG	5 cut(s)	48, 269, 560, 759, 975
BmsI	GCATC	4 cut(s)	79, 360, 836, 977
BmtI	GCTAGC	1 cut(s)	131
BpiI	GAAGAC	2 cut(s)	217, 1250
BpmI	CTGGAG	5 cut(s)	449, 581, 702, 780, 943
Bpu10I	CCTNAGC	3 cut(s)	380, 630, 964
BpuMI	CCSGG	1 cut(s)	269
BsaAI	YACGTR	1 cut(s)	501
BsaBI	GATNNNNATC	2 cut(s)	648, 741
BsaHI	GRCGYC	1 cut(s)	978
BsaJI	CCNNGG	4 cut(s)	46, 47, 267, 591
BsaWI	WCCGGW	1 cut(s)	337
BsaXI	ACNNNNNCTCC	4 cut(s)	176, 206, 1196, 1226
Bsc4I	CCNNNNNNNGG	4 cut(s)	198, 324, 325, 631
Bse118I	RCCGGY	1 cut(s)	859
Bse1I	ACTGG	1 cut(s)	926
Bse21I	CCTNAGG	2 cut(s)	822, 1052
Bse8I	GATNNNNATC	2 cut(s)	648, 741
BseAI	TCCGGA	1 cut(s)	337
BseBI	CCWGG	4 cut(s)	48, 560, 759, 975
BseDI	CCNNGG	4 cut(s)	46, 47, 267, 591
BseGI	GGATG	4 cut(s)	297, 351, 649, 754
BseJI	GATNNNNATC	2 cut(s)	648, 741
BseLI	CCNNNNNNNGG	4 cut(s)	198, 324, 325, 631
BseMII	CTCAG	3 cut(s)	621, 644, 813
BseNI	ACTGG	1 cut(s)	926
BseRI	GAGGAG	2 cut(s)	359, 578
BseSI	GKGCMC	1 cut(s)	949
BseXI	GCAGC	7 cut(s)	80, 255, 363, 460, 559, 826, 1044
BshFI	GGCC	3 cut(s)	143, 635, 674
BshNI	GGYRCC	1 cut(s)	977
BsiHKAI	GWGCWC	2 cut(s)	688, 949
BsiHKCI	CYCGRG	1 cut(s)	702
BsiSI	CCGG	6 cut(s)	132, 269, 338, 373, 662, 860
BsiWI	CGTACG	1 cut(s)	151
BslFI	GGGAC	1 cut(s)	520
BslI	CCNNNNNNNGG	4 cut(s)	198, 324, 325, 631
BsmAI	GTCTC	1 cut(s)	996
BsmFI	GGGAC	1 cut(s)	520
BsmI	GAATGC	2 cut(s)	80, 96
BsnI	GGCC	3 cut(s)	143, 635, 674
BsoBI	CYCGRG	1 cut(s)	702
Bsp1286I	GDGCHC	4 cut(s)	411, 688, 949, 956
Bsp13I	TCCGGA	1 cut(s)	337
Bsp143I	GATC	2 cut(s)	775, 970
Bsp19I	CCATGG	1 cut(s)	591
BspACI	CCGC	7 cut(s)	387, 504, 636, 671, 939, 981, 1164
BspANI	GGCC	3 cut(s)	143, 635, 674
BspCNI	CTCAG	3 cut(s)	622, 645, 814
BspEI	TCCGGA	1 cut(s)	337
BspHI	TCATGA	1 cut(s)	477
BspLI	GGNNCC	2 cut(s)	953, 979
BspMAI	CTGCAG	1 cut(s)	1062
BspOI	GCTAGC	1 cut(s)	131
BspPI	GGATC	1 cut(s)	965
BspT107I	GGYRCC	1 cut(s)	977
BsrBI	CCGCTC	1 cut(s)	1164
BsrFI	RCCGGY	1 cut(s)	859
BsrI	ACTGG	1 cut(s)	926
BssAI	RCCGGY	1 cut(s)	859
BssECI	CCNNGG	4 cut(s)	46, 47, 267, 591
BssMI	GATC	2 cut(s)	775, 970
BssNI	GRCGYC	1 cut(s)	978
BssSI	CACGAG	1 cut(s)	611
BssT1I	CCWWGG	1 cut(s)	591
Bst2BI	CACGAG	1 cut(s)	611
Bst2UI	CCWGG	4 cut(s)	48, 560, 759, 975
Bst4CI	ACNGT	1 cut(s)	806
Bst6I	CTCTTC	4 cut(s)	428, 539, 837, 890
BstACI	GRCGYC	1 cut(s)	978
BstAPI	GCANNNNNTGC	1 cut(s)	357
BstBAI	YACGTR	1 cut(s)	501
BstC8I	GCNNGC	5 cut(s)	94, 129, 659, 857, 1230
BstDEI	CTNAG	6 cut(s)	380, 630, 653, 822, 964, 1052
BstDSI	CCRYGG	1 cut(s)	591
BstENI	CCTNNNNNAGG	1 cut(s)	629
BstF5I	GGATG	4 cut(s)	297, 351, 649, 754
BstH2I	RGCGCY	1 cut(s)	981
BstHHI	GCGC	1 cut(s)	980
BstKTI	GATC	2 cut(s)	778, 973
BstMAI	GTCTC	1 cut(s)	996
BstMBI	GATC	2 cut(s)	775, 970
BstMWI	GCNNNNNNNGC	5 cut(s)	357, 635, 677, 901, 936
BstNI	CCWGG	4 cut(s)	48, 560, 759, 975
BstNSI	RCATGY	1 cut(s)	1009
BstSCI	CCNGG	5 cut(s)	46, 267, 558, 757, 973
BstSFI	CTRYAG	1 cut(s)	1058
BstSLI	GKGCMC	1 cut(s)	949
BstV1I	GCAGC	7 cut(s)	80, 255, 363, 460, 559, 826, 1044
BstV2I	GAAGAC	2 cut(s)	217, 1250
BstX2I	RGATCY	1 cut(s)	970
BstXI	CCANNNNNNTGG	1 cut(s)	397
BstYI	RGATCY	1 cut(s)	970
Bsu36I	CCTNAGG	2 cut(s)	822, 1052
BsuI	GTATCC	1 cut(s)	775
BsuRI	GGCC	3 cut(s)	143, 635, 674
BtgI	CCRYGG	1 cut(s)	591
BtgZI	GCGATG	1 cut(s)	1247
BtsCI	GGATG	4 cut(s)	297, 351, 649, 754
BtsI	GCAGTG	1 cut(s)	949
BtsIMutI	CAGTG	1 cut(s)	949
Cac8I	GCNNGC	5 cut(s)	94, 129, 659, 857, 1230
CciI	TCATGA	1 cut(s)	477
CfoI	GCGC	1 cut(s)	980
Cfr10I	RCCGGY	1 cut(s)	859
Cfr13I	GGNCC	4 cut(s)	384, 673, 862, 1048
CpoI	CGGWCCG	1 cut(s)	862
CseI	GACGC	1 cut(s)	450
Csp6I	GTAC	2 cut(s)	19, 152
CspI	CGGWCCG	1 cut(s)	862
CviAII	CATG	8 cut(s)	106, 394, 478, 592, 698, 773, 836, 1006
CviQI	GTAC	2 cut(s)	19, 152
DdeI	CTNAG	6 cut(s)	380, 630, 653, 822, 964, 1052
DinI	GGCGCC	1 cut(s)	979
DpnI	GATC	2 cut(s)	777, 972
DpnII	GATC	2 cut(s)	775, 970
DrdI	GACNNNNNNGTC	1 cut(s)	116
DriI	GACNNNNNGTC	1 cut(s)	460
DseDI	GACNNNNNNGTC	1 cut(s)	116
Eam1104I	CTCTTC	4 cut(s)	428, 539, 837, 890
Eam1105I	GACNNNNNGTC	1 cut(s)	460
EarI	CTCTTC	4 cut(s)	428, 539, 837, 890
Ecl136II	GAGCTC	1 cut(s)	686
Eco130I	CCWWGG	1 cut(s)	591
Eco24I	GRGCYC	3 cut(s)	411, 688, 956
Eco47I	GGWCC	3 cut(s)	384, 862, 1048
Eco53kI	GAGCTC	1 cut(s)	686
Eco72I	CACGTG	1 cut(s)	501
Eco81I	CCTNAGG	2 cut(s)	822, 1052
Eco88I	CYCGRG	1 cut(s)	702
EcoICRI	GAGCTC	1 cut(s)	686
EcoNI	CCTNNNNNAGG	1 cut(s)	629
EcoO109I	RGGNCCY	1 cut(s)	1048
EcoRI	GAATTC	1 cut(s)	1285
EcoRII	CCWGG	4 cut(s)	46, 558, 757, 973
EcoT14I	CCWWGG	1 cut(s)	591
EcoT38I	GRGCYC	3 cut(s)	411, 688, 956
EgeI	GGCGCC	1 cut(s)	979
EheI	GGCGCC	1 cut(s)	979
ErhI	CCWWGG	1 cut(s)	591
FaeI	CATG	8 cut(s)	109, 397, 481, 595, 701, 776, 839, 1009
FaqI	GGGAC	1 cut(s)	520
FatI	CATG	8 cut(s)	105, 393, 477, 591, 697, 772, 835, 1005
FauI	CCCGC	2 cut(s)	497, 1157
FblI	GTMKAC	1 cut(s)	793
FokI	GGATG	4 cut(s)	304, 338, 656, 741
FriOI	GRGCYC	3 cut(s)	411, 688, 956
FspBI	CTAG	4 cut(s)	128, 320, 452, 693
GlaI	GCGC	1 cut(s)	979
GsuI	CTGGAG	5 cut(s)	449, 581, 702, 780, 943
HaeII	RGCGCY	1 cut(s)	981
HaeIII	GGCC	3 cut(s)	143, 635, 674
HapII	CCGG	6 cut(s)	132, 269, 338, 373, 662, 860
HgaI	GACGC	1 cut(s)	450
HhaI	GCGC	1 cut(s)	980
Hin1I	GRCGYC	1 cut(s)	978
Hin1II	CATG	8 cut(s)	109, 397, 481, 595, 701, 776, 839, 1009
Hin6I	GCGC	1 cut(s)	978
HinP1I	GCGC	1 cut(s)	978
HinfI	GANTC	7 cut(s)	32, 260, 481, 566, 649, 784, 1012
HpaII	CCGG	6 cut(s)	132, 269, 338, 373, 662, 860
HphI	GGTGA	5 cut(s)	172, 230, 553, 607, 1189
Hpy166II	GTNNAC	3 cut(s)	556, 794, 947
Hpy188I	TCNGA	5 cut(s)	232, 654, 866, 892, 1275
Hpy188III	TCNNGA	4 cut(s)	101, 206, 338, 478
Hpy8I	GTNNAC	3 cut(s)	556, 794, 947
Hpy99I	CGWCG	2 cut(s)	89, 314
HpyAV	CCTTC	5 cut(s)	337, 495, 592, 1161, 1193
HpyCH4III	ACNGT	1 cut(s)	806
HpyCH4IV	ACGT	2 cut(s)	500, 519
HpyF10VI	GCNNNNNNNGC	5 cut(s)	357, 635, 677, 901, 936
HpyF3I	CTNAG	6 cut(s)	380, 630, 653, 822, 964, 1052
HpySE526I	ACGT	2 cut(s)	500, 519
Hsp92I	GRCGYC	1 cut(s)	978
Hsp92II	CATG	8 cut(s)	109, 397, 481, 595, 701, 776, 839, 1009
HspAI	GCGC	1 cut(s)	978
KasI	GGCGCC	1 cut(s)	977
Kpn2I	TCCGGA	1 cut(s)	337
Kzo9I	GATC	2 cut(s)	775, 970
LmnI	GCTCC	3 cut(s)	683, 909, 951
Lsp1109I	GCAGC	7 cut(s)	80, 255, 363, 460, 559, 826, 1044
LweI	GCATC	4 cut(s)	79, 360, 836, 977
MaeI	CTAG	4 cut(s)	128, 320, 452, 693
MaeII	ACGT	2 cut(s)	500, 519
MaeIII	GTNAC	6 cut(s)	37, 277, 462, 494, 620, 1267
MalI	GATC	2 cut(s)	777, 972
MbiI	CCGCTC	1 cut(s)	1164
MboI	GATC	2 cut(s)	775, 970
MboII	GAAGA	8 cut(s)	16, 217, 298, 445, 556, 824, 877, 1255
MflI	RGATCY	1 cut(s)	970
MhlI	GDGCHC	4 cut(s)	411, 688, 949, 956
MluCI	AATT	5 cut(s)	135, 174, 798, 1072, 1285
Mly113I	GGCGCC	1 cut(s)	978
MlyI	GAGTC	3 cut(s)	269, 575, 793
MmeI	TCCRAC	1 cut(s)	255
MroI	TCCGGA	1 cut(s)	337
MroXI	GAANNNNTTC	1 cut(s)	1150
MseI	TTAA	4 cut(s)	138, 1158, 1185, 1297
MspA1I	CMGCKG	2 cut(s)	638, 939
MspI	CCGG	6 cut(s)	132, 269, 338, 373, 662, 860
MspR9I	CCNGG	5 cut(s)	48, 269, 560, 759, 975
Mva1269I	GAATGC	2 cut(s)	80, 96
MvaI	CCWGG	4 cut(s)	48, 560, 759, 975
MwoI	GCNNNNNNNGC	5 cut(s)	357, 635, 677, 901, 936
NarI	GGCGCC	1 cut(s)	978
NciI	CCSGG	1 cut(s)	269
NcoI	CCATGG	1 cut(s)	591
NdeII	GATC	2 cut(s)	775, 970
NheI	GCTAGC	1 cut(s)	127
NlaIII	CATG	8 cut(s)	109, 397, 481, 595, 701, 776, 839, 1009
NlaIV	GGNNCC	2 cut(s)	953, 979
NmuCI	GTSAC	3 cut(s)	37, 462, 494
NspI	RCATGY	1 cut(s)	1009
PaeR7I	CTCGAG	1 cut(s)	702
PagI	TCATGA	1 cut(s)	477
PasI	CCCWGGG	1 cut(s)	47
PciI	ACATGT	1 cut(s)	1005
PctI	GAATGC	2 cut(s)	80, 96
PdmI	GAANNNNTTC	1 cut(s)	1150
PfeI	GAWTC	4 cut(s)	32, 481, 649, 1012
Pfl23II	CGTACG	1 cut(s)	151
PfoI	TCCNGGA	1 cut(s)	757
PleI	GAGTC	3 cut(s)	268, 574, 792
PluTI	GGCGCC	1 cut(s)	981
PmaCI	CACGTG	1 cut(s)	501
PmlI	CACGTG	1 cut(s)	501
PpsI	GAGTC	3 cut(s)	268, 574, 792
Ppu21I	YACGTR	1 cut(s)	501
PpuMI	RGGWCCY	1 cut(s)	1048
PscI	ACATGT	1 cut(s)	1005
PshBI	ATTAAT	1 cut(s)	1185
Psp124BI	GAGCTC	1 cut(s)	688
Psp5II	RGGWCCY	1 cut(s)	1048
Psp6I	CCWGG	4 cut(s)	46, 558, 757, 973
PspCI	CACGTG	1 cut(s)	501
PspGI	CCWGG	4 cut(s)	46, 558, 757, 973
PspLI	CGTACG	1 cut(s)	151
PspN4I	GGNNCC	2 cut(s)	953, 979
PspPI	GGNCC	4 cut(s)	384, 673, 862, 1048
PspPPI	RGGWCCY	1 cut(s)	1048
PspXI	VCTCGAGB	1 cut(s)	702
PstI	CTGCAG	1 cut(s)	1062
PsuI	RGATCY	1 cut(s)	970
RsaI	GTAC	2 cut(s)	20, 153
RsaNI	GTAC	2 cut(s)	19, 152
Rsr2I	CGGWCCG	1 cut(s)	862
RsrII	CGGWCCG	1 cut(s)	862
SacI	GAGCTC	1 cut(s)	688
SaqAI	TTAA	4 cut(s)	138, 1158, 1185, 1297
Sau3AI	GATC	2 cut(s)	775, 970
Sau96I	GGNCC	4 cut(s)	384, 673, 862, 1048
ScaI	AGTACT	1 cut(s)	20
SchI	GAGTC	3 cut(s)	269, 575, 793
ScrFI	CCNGG	5 cut(s)	48, 269, 560, 759, 975
SduI	GDGCHC	4 cut(s)	411, 688, 949, 956
SfaNI	GCATC	4 cut(s)	79, 360, 836, 977
SfcI	CTRYAG	1 cut(s)	1058
SfoI	GGCGCC	1 cut(s)	979
Sfr274I	CTCGAG	1 cut(s)	702
SinI	GGWCC	3 cut(s)	384, 862, 1048
SlaI	CTCGAG	1 cut(s)	702
SmlI	CTYRAG	1 cut(s)	702
SmoI	CTYRAG	1 cut(s)	702
Sse9I	AATT	5 cut(s)	135, 174, 798, 1072, 1285
SsiI	CCGC	7 cut(s)	387, 504, 636, 671, 939, 981, 1164
SspDI	GGCGCC	1 cut(s)	977
SspMI	CTAG	4 cut(s)	128, 320, 452, 693
SstI	GAGCTC	1 cut(s)	688
StyD4I	CCNGG	5 cut(s)	46, 267, 558, 757, 973
StyI	CCWWGG	1 cut(s)	591
TaaI	ACNGT	1 cut(s)	806
TaiI	ACGT	2 cut(s)	503, 522
TaqI	TCGA	9 cut(s)	84, 102, 312, 405, 418, 703, 808, 918, 1010
TasI	AATT	5 cut(s)	135, 174, 798, 1072, 1285
TatI	WGTACW	1 cut(s)	18
TauI	GCSGC	4 cut(s)	638, 674, 942, 983
TfiI	GAWTC	4 cut(s)	32, 481, 649, 1012
Tru1I	TTAA	4 cut(s)	138, 1158, 1185, 1297
Tru9I	TTAA	4 cut(s)	138, 1158, 1185, 1297
TscAI	CASTG	1 cut(s)	949
TseFI	GTSAC	3 cut(s)	37, 462, 494
TseI	GCWGC	7 cut(s)	68, 243, 376, 448, 572, 839, 1057
Tsp45I	GTSAC	3 cut(s)	37, 462, 494
TspDTI	ATGAA	4 cut(s)	17, 824, 1143, 1256
TspGWI	ACGGA	2 cut(s)	25, 964
TspRI	CASTG	1 cut(s)	949
VneI	GTGCAC	1 cut(s)	945
VpaK11BI	GGWCC	3 cut(s)	384, 862, 1048
VspI	ATTAAT	1 cut(s)	1185
XagI	CCTNNNNNAGG	1 cut(s)	629
XapI	RAATTY	1 cut(s)	1285
XceI	RCATGY	1 cut(s)	1009
XcmI	CCANNNNNNNNNTGG	1 cut(s)	598
XhoI	CTCGAG	1 cut(s)	702
XmiI	GTMKAC	1 cut(s)	793
XmnI	GAANNNNTTC	1 cut(s)	1150
XspI	CTAG	4 cut(s)	128, 320, 452, 693
ZrmI	AGTACT	1 cut(s)	20

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.