Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0007799

Physical Location & Seq

Genomic Coordinates Reverse (-)

56772678 .. 56775519

Gene Structure 2842 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0442200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2334 bp

ATGGCTGTTTCATCTTCATCTTCCTTCATCTTCTTCTTCTTCTTCTTCCTTGTCCTCTGTCTCGTTCATGTAACTTCTTTCTCAACTGACCAATCCGACGGTCACCGGACCTTCATCGTCCACGTGTCGAAATATTCCAAGCCGGCTCTGTTCTCCTCCCACCGCCGCTGGTACACCTCCATCCTCCGCTCCCTCCCTCCTTCCCCTCACCCCACCAAGCTCCTCTACACCTACTCACGCGCCGTCCATGGCTTCTCCGCCACGCTCTCCCCCTCCCAGGCCCACGCGCTCCAGTCCCACCCCGCCGTCCTCTCCGTCGTCCCCGACATGCCGCGCCAGCTCCACACCACCCGCACCTACAACTTCCTCGGCCTCGCCGACAACTTCGGCCTCTGGCCTAACTCCGACTACGCGGACGACGTCATCATCGGAGTTCTCGACACCGGGATTTGGCCCGAGCGCCCGAGCTTCTCGGACTCGGGTCTGGGTCCCGTCCCGGAGACGTGGAAAGGCAAATGCGTGACCGCCGGCGACTTTCCGGCCTCCGCTTGTAACCGGAAGATCATCGGCGCCAGAGCTTATTTCAACGGCTACGAATCCCACCTCGGAAAACCCATGGACGAGTCCAACGAATCCAGGTCCCCACGCGACACAGAAGGCCACGGCACCCACACAGCCTCCACCGCCGGCGGGTCTAGGGTTTCTAACGCCAGCTTCTACGAATACGCCTACGGCGAAGCCAGAGGTATGGCCAGCAAAGCCAGAATCGCAGCCTATAAAATCTGCTGGACTTTTGGTTGTTTCGATTCCGATATTCTCGCCGCCATGGACCAAGCAATTGCCGACGGAGTCCACATCATCTCGCTCTCCGTCGGAGCCAGCGGCGGCGCTCCGCCTTACGATCGCGACTCCATCGCAATCGGAGCTTTCGGCGCGGCCCAGCACGGCGTTCTGGTCTCGGCCTCTGCAGGAAACTCCGGGCCCGGCGCGTTTACCGCCACCAACATCGCTCCTTGGATTCTTACAGTCGGAGCTTCCACTCTTGACAGAGAGTTCCCGGCCGATGTCGTTTTGGGCGACGGCAGAGTCTTCAACGGCGTGTCGTTGTACTCCGGCGAGGGTCTAGTGGACTTCAAGCTCCCGTTAGTCTACGGCGGAGACTGCGGCAGTAGGTACTGCTTTGCAGGGTCTCTGCAACCGTCAAAAGTACAAGGCAAGATCGTTGTTTGTGATCGTGGAGGTAACGCCAGAGTCGCCAAAGGCAGCGCCGTTAAGCTTGCAGGTGGGATCGGAATGATAATGGCAAATACAGAAGAGAACGGTGAAGAGCTTCTTGCTGATTCTCACCTCGTCCCAGCAACAATGGTGGGTCAAATCGCTGCTGATCAGATAAGGAACTACATCAGATTGGGGGACTATCCGACTGCAACGATCAAATTCCGAGGAACTGTTATTGGGCCTTCTCCACCATCGCCAAAGGTAGCTTCGTTTTCGAGTAGGGGTCCGAATTCTCTGACTCCGGAGATATTGAAACCCGATGTGATTGCTCCTGGAGTGAACATTCTAGCTGGGTGGACTGGTGCTTCTTCCCCTACTGATTTGGACATTGATTCGAGACGAGTTGAGTTCAATATAATTTCTGGCACATCCATGTCCTGCCCACATGTCAGTGGCATTGCAGCTCTGCTTCGAAAGGCCTATCCGGAATGGTCTCCTGCTGCTATTAAATCCGCATTGGTGACAACAGCTTATACTTTGGACAATTCCGGGAAGAAGATTGAGGATCTTGCAAATGGGGGAGAATCGACGCCTTTTGTTCATGGAGCCGGGCATGTTGATCCCAATAGGGCACTTAATCCGGGGTTGGTGTATGATATCAATGTGAATGACTATGTTGCATTCATGTGCTCGATTGGTTATGGTCCTAGGCAGATAGCTGTTTTCGTGAGAGAGTTAGCTGGGGATGATATATGTGCTAGAAACAGTTTAGCCAGTCCTGGTGATTTGAATTATCCGTCATTTGCAGTGGTGTTTAAGCCTGGCCAGGAGTTGGTGAAGTACAAGAGAGTTGTGACGAATGTTGGGAGTGTTGCTGATGCAGTTTATGAGGTAAATGTGGATGCTCCGGCGGGTGTTGAAATCAGTGTTGAGCCGAGTAAGCTGGTTTTCAGTGAAGAAAATCAGACTCAGAGTTATGAGGTTACATTTGCGAAAGGTGTTGGATATGGAAATGGGGAGAGATATGGGTCGATTGAGTGGAGCAATGGGCATCACCATGTGAGGAGTCCAGTTGCTGTTAGGTGGAGCAGTACTGGGTATTCAGCCTCCATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005783 GO:0005794 GO:0009507 GO:0009536 GO:0012505 GO:0016020 GO:0031090 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

HSP70

Protein Analysis

777

Amino Acids

82.65

Weight (kDa)

6.24

Isoelectric Point (pI)

38.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	37 - 115	7.1e-18	Peptidase inhibitor I9
Peptidase_S8	PF00082	139 - 599	4.2e-50	Subtilase family
PA	PF02225	380 - 464	2.7e-13	PA domain
fn3_6	PF17766	668 - 766	2.9e-28	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007799)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16660 AT4G16660
fragaria_vesca	FvH4_6g39720 FvH4_6g39720 FvH4_6g39720 FvH4_6g39720 FvH4_6g39720
malus_domestica	MD09G1137300.v1.1 MD17G1127600.v1.1
prunus_persica	Prupe.3G187600_v2.0.a1 Prupe.3G187600_v2.0.a1
pyrus_communis	pycom09g05840 pycom17g11990
rosa_chinensis	RchiOBHm_Chr2g0153811
rosa_laevigata	RLG00000020726
rosa_multiflora	Rmu_sc0013018.1_g000001
rosa_roxburghii	Rroxscaffold_2G00094740
rosa_rugosa	Rorug02G0442100.1 Rorug02G0442200
rosa_samantha	Rh2AG506000 Rh2BG515500 Rh2CG491500 Rh2DG528000
rosa_wichuraiana	Rw2G041530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1271
AasI	GACNNNNNNGTC	1 cut(s)	1085
AatII	GACGTC	1 cut(s)	423
Acc36I	ACCTGC	1 cut(s)	1271
AccB1I	GGYRCC	2 cut(s)	569, 665
AccB7I	CCANNNNNTGG	1 cut(s)	2050
AccBSI	CCGCTC	1 cut(s)	189
AccI	GTMKAC	1 cut(s)	1149
AccII	CGCG	8 cut(s)	240, 287, 334, 413, 648, 906, 935, 989
AccIII	TCCGGA	2 cut(s)	1519, 1702
AclWI	GGATC	3 cut(s)	1295, 1791, 1832
AcoI	YGGCCR	3 cut(s)	750, 1059, 2041
AcsI	RAATTY	2 cut(s)	1436, 1507
AcvI	CACGTG	1 cut(s)	124
AcyI	GRCGYC	3 cut(s)	420, 570, 1808
AdeI	CACNNNGTG	1 cut(s)	2278
AfaI	GTAC	6 cut(s)	173, 1109, 1175, 1209, 2060, 2311
AfiI	CCNNNNNNNGG	4 cut(s)	277, 450, 690, 2050
AflIII	ACRYGT	2 cut(s)	123, 1663
AgsI	TTSAA	7 cut(s)	586, 1093, 1135, 1531, 1630, 2008, 2138
AjiI	CACGTC	1 cut(s)	504
AjnI	CCWGG	6 cut(s)	276, 635, 1549, 1996, 2038, 2043
AjuI	GAANNNNNNNTTGG	2 cut(s)	1468, 1500
Alw21I	GWGCWC	1 cut(s)	1910
Alw26I	GTCTC	7 cut(s)	65, 494, 961, 1152, 1194, 1609, 1716
AlwI	GGATC	3 cut(s)	1295, 1791, 1832
AlwNI	CAGNNNCTG	1 cut(s)	2294
Ama87I	CYCGRG	3 cut(s)	455, 463, 478
Aor13HI	TCCGGA	2 cut(s)	1519, 1702
ApaI	GGGCCC	1 cut(s)	984
ApeKI	GCWGC	5 cut(s)	770, 1263, 1379, 1679, 1718
ApoI	RAATTY	2 cut(s)	1436, 1507
Asp700I	GAANNNNTTC	1 cut(s)	1329
AspA2I	CCTAGG	1 cut(s)	1925
AspLEI	GCGC	9 cut(s)	242, 289, 336, 462, 572, 890, 935, 989, 1268
AsuC2I	CCSGG	8 cut(s)	445, 497, 979, 984, 1058, 1768, 1828, 1860
AsuHPI	GGTGA	8 cut(s)	95, 200, 1334, 1337, 1750, 2012, 2065, 2264
AsuII	TTCGAA	1 cut(s)	1690
AvaI	CYCGRG	3 cut(s)	455, 463, 478
AvaII	GGWCC	6 cut(s)	108, 488, 639, 829, 1502, 1922
AvrII	CCTAGG	1 cut(s)	1925
BaeGI	GKGCMC	2 cut(s)	984, 1852
BalI	TGGCCA	2 cut(s)	752, 2043
BanI	GGYRCC	2 cut(s)	569, 665
BanII	GRGCYC	1 cut(s)	984
BbrPI	CACGTG	1 cut(s)	124
BbsI	GAAGAC	1 cut(s)	1081
Bbv12I	GWGCWC	1 cut(s)	1910
BbvI	GCAGC	5 cut(s)	782, 1275, 1366, 1691, 1705
BccI	CCATC	3 cut(s)	188, 920, 1477
BcgI	CGANNNNNNTGC	2 cut(s)	1526, 1560
BciT130I	CCWGG	6 cut(s)	278, 637, 1551, 1998, 2040, 2045
BclI	TGATCA	1 cut(s)	1384
BcnI	CCSGG	8 cut(s)	445, 497, 979, 984, 1058, 1768, 1828, 1860
BcoDI	GTCTC	7 cut(s)	65, 494, 961, 1152, 1194, 1609, 1716
BfaI	CTAG	5 cut(s)	696, 1124, 1565, 1926, 1977
BfmI	CTRYAG	1 cut(s)	966
BfoI	RGCGCY	4 cut(s)	463, 573, 891, 1269
BfuAI	ACCTGC	1 cut(s)	1271
BlnI	CCTAGG	1 cut(s)	1925
BmcAI	AGTACT	1 cut(s)	2311
Bme18I	GGWCC	6 cut(s)	108, 488, 639, 829, 1502, 1922
BmeT110I	CYCGRG	3 cut(s)	455, 463, 478
BmgBI	CACGTC	1 cut(s)	504
BmiI	GGNNCC	9 cut(s)	489, 490, 571, 641, 667, 877, 982, 1503, 1825
BmrI	ACTGGG	1 cut(s)	2322
BmsI	GCATC	3 cut(s)	2086, 2110, 2278
BmuI	ACTGGG	1 cut(s)	2322
BoxI	GACNNNNGTC	1 cut(s)	480
BpiI	GAAGAC	1 cut(s)	1081
BpmI	CTGGAG	2 cut(s)	275, 1572
Bpu14I	TTCGAA	1 cut(s)	1690
BpuMI	CCSGG	8 cut(s)	445, 497, 979, 984, 1058, 1768, 1828, 1860
BsaAI	YACGTR	1 cut(s)	124
BsaHI	GRCGYC	3 cut(s)	420, 570, 1808
BsaI	GGTCTC	3 cut(s)	961, 1194, 1716
BsaWI	WCCGGW	4 cut(s)	105, 555, 1519, 1702
BsaXI	ACNNNNNCTCC	2 cut(s)	662, 692
Bsc4I	CCNNNNNNNGG	4 cut(s)	277, 450, 690, 2050
Bse118I	RCCGGY	3 cut(s)	142, 527, 686
Bse1I	ACTGG	5 cut(s)	292, 1582, 1992, 2288, 2317
Bse3DI	GCAATG	2 cut(s)	1674, 2269
BseAI	TCCGGA	2 cut(s)	1519, 1702
BseBI	CCWGG	6 cut(s)	278, 637, 1551, 1998, 2040, 2045
BseGI	GGATG	4 cut(s)	180, 1646, 1969, 2125
BseLI	CCNNNNNNNGG	4 cut(s)	277, 450, 690, 2050
BseMI	GCAATG	2 cut(s)	1674, 2269
BseMII	CTCAG	1 cut(s)	2201
BseNI	ACTGG	5 cut(s)	292, 1582, 1992, 2288, 2317
BseRI	GAGGAG	3 cut(s)	145, 212, 2296
BseSI	GKGCMC	2 cut(s)	984, 1852
BseX3I	CGGCCG	1 cut(s)	1059
BseXI	GCAGC	5 cut(s)	782, 1275, 1366, 1691, 1705
BseYI	CCCAGC	4 cut(s)	939, 1354, 1568, 1958
Bsh1236I	CGCG	8 cut(s)	240, 287, 334, 413, 648, 906, 935, 989
Bsh1285I	CGRYCG	2 cut(s)	904, 1062
BshNI	GGYRCC	2 cut(s)	569, 665
BsiEI	CGRYCG	2 cut(s)	904, 1062
BsiHKAI	GWGCWC	1 cut(s)	1910
BsiHKCI	CYCGRG	3 cut(s)	455, 463, 478
BslFI	GGGAC	7 cut(s)	280, 305, 474, 479, 625, 1337, 1427
BslI	CCNNNNNNNGG	4 cut(s)	277, 450, 690, 2050
BsmAI	GTCTC	7 cut(s)	65, 494, 961, 1152, 1194, 1609, 1716
BsmBI	CGTCTC	2 cut(s)	494, 1609
BsmFI	GGGAC	7 cut(s)	280, 305, 474, 479, 625, 1337, 1427
BsmI	GAATGC	1 cut(s)	1898
Bso31I	GGTCTC	3 cut(s)	961, 1194, 1716
BsoBI	CYCGRG	3 cut(s)	455, 463, 478
Bsp119I	TTCGAA	1 cut(s)	1690
Bsp120I	GGGCCC	1 cut(s)	980
Bsp1286I	GDGCHC	3 cut(s)	984, 1852, 1910
Bsp13I	TCCGGA	2 cut(s)	1519, 1702
Bsp143I	GATC	9 cut(s)	561, 901, 1218, 1231, 1287, 1384, 1431, 1783, 1837
Bsp19I	CCATGG	3 cut(s)	247, 615, 825
Bsp68I	TCGCGA	1 cut(s)	906
BspCNI	CTCAG	1 cut(s)	2200
BspEI	TCCGGA	2 cut(s)	1519, 1702
BspFNI	CGCG	8 cut(s)	240, 287, 334, 413, 648, 906, 935, 989
BspLI	GGNNCC	9 cut(s)	489, 490, 571, 641, 667, 877, 982, 1503, 1825
BspMAI	CTGCAG	1 cut(s)	970
BspMI	ACCTGC	1 cut(s)	1271
BspPI	GGATC	3 cut(s)	1295, 1791, 1832
BspQI	GCTCTTC	1 cut(s)	1320
BspT104I	TTCGAA	1 cut(s)	1690
BspT107I	GGYRCC	2 cut(s)	569, 665
BspTNI	GGTCTC	3 cut(s)	961, 1194, 1716
BsrBI	CCGCTC	1 cut(s)	189
BsrDI	GCAATG	2 cut(s)	1674, 2269
BsrFI	RCCGGY	3 cut(s)	142, 527, 686
BsrI	ACTGG	5 cut(s)	292, 1582, 1992, 2288, 2317
BssAI	RCCGGY	3 cut(s)	142, 527, 686
BssMI	GATC	9 cut(s)	561, 901, 1218, 1231, 1287, 1384, 1431, 1783, 1837
BssNI	GRCGYC	3 cut(s)	420, 570, 1808
BssT1I	CCWWGG	5 cut(s)	247, 615, 825, 1013, 1925
Bst2UI	CCWGG	6 cut(s)	278, 637, 1551, 1998, 2040, 2045
Bst4CI	ACNGT	6 cut(s)	101, 1027, 1200, 1322, 1450, 1985
Bst6I	CTCTTC	2 cut(s)	1308, 1320
BstACI	GRCGYC	3 cut(s)	420, 570, 1808
BstBAI	YACGTR	1 cut(s)	124
BstBI	TTCGAA	1 cut(s)	1690
BstC8I	GCNNGC	8 cut(s)	144, 338, 529, 688, 712, 754, 880, 1278
BstDEI	CTNAG	1 cut(s)	2187
BstDSI	CCRYGG	4 cut(s)	247, 615, 661, 825
BstEII	GGTNACC	1 cut(s)	101
BstF5I	GGATG	4 cut(s)	180, 1646, 1969, 2125
BstFNI	CGCG	8 cut(s)	240, 287, 334, 413, 648, 906, 935, 989
BstH2I	RGCGCY	4 cut(s)	463, 573, 891, 1269
BstHHI	GCGC	9 cut(s)	242, 289, 336, 462, 572, 890, 935, 989, 1268
BstKTI	GATC	9 cut(s)	564, 904, 1221, 1234, 1290, 1387, 1434, 1786, 1840
BstMAI	GTCTC	7 cut(s)	65, 494, 961, 1152, 1194, 1609, 1716
BstMBI	GATC	9 cut(s)	561, 901, 1218, 1231, 1287, 1384, 1431, 1783, 1837
BstMCI	CGRYCG	2 cut(s)	904, 1062
BstNI	CCWGG	6 cut(s)	278, 637, 1551, 1998, 2040, 2045
BstNSI	RCATGY	3 cut(s)	331, 1667, 1835
BstPAI	GACNNNNGTC	1 cut(s)	480
BstPI	GGTNACC	1 cut(s)	101
BstSFI	CTRYAG	1 cut(s)	966
BstSLI	GKGCMC	2 cut(s)	984, 1852
BstUI	CGCG	8 cut(s)	240, 287, 334, 413, 648, 906, 935, 989
BstV1I	GCAGC	5 cut(s)	782, 1275, 1366, 1691, 1705
BstV2I	GAAGAC	1 cut(s)	1081
BstX2I	RGATCY	1 cut(s)	1783
BstXI	CCANNNNNNTGG	1 cut(s)	748
BstYI	RGATCY	1 cut(s)	1783
BstZI	CGGCCG	1 cut(s)	1059
BtgI	CCRYGG	4 cut(s)	247, 615, 661, 825
BtgZI	GCGATG	3 cut(s)	898, 991, 1455
BtrI	CACGTC	1 cut(s)	504
BtsCI	GGATG	4 cut(s)	180, 1646, 1969, 2125
BtsI	GCAGTG	1 cut(s)	2031
BtsIMutI	CAGTG	4 cut(s)	1675, 2031, 2149, 2176
BtuMI	TCGCGA	1 cut(s)	906
BveI	ACCTGC	1 cut(s)	1271
Cac8I	GCNNGC	8 cut(s)	144, 338, 529, 688, 712, 754, 880, 1278
CaiI	CAGNNNCTG	1 cut(s)	2294
CfoI	GCGC	9 cut(s)	242, 289, 336, 462, 572, 890, 935, 989, 1268
Cfr10I	RCCGGY	3 cut(s)	142, 527, 686
CseI	GACGC	1 cut(s)	1816
Csp6I	GTAC	6 cut(s)	172, 1108, 1174, 1208, 2059, 2310
CspCI	CAANNNNNGTGG	2 cut(s)	1347, 1382
CviQI	GTAC	6 cut(s)	172, 1108, 1174, 1208, 2059, 2310
DdeI	CTNAG	1 cut(s)	2187
DinI	GGCGCC	1 cut(s)	571
DpnI	GATC	9 cut(s)	563, 903, 1220, 1233, 1289, 1386, 1433, 1785, 1839
DpnII	GATC	9 cut(s)	561, 901, 1218, 1231, 1287, 1384, 1431, 1783, 1837
DraIII	CACNNNGTG	1 cut(s)	2278
DrdI	GACNNNNNNGTC	1 cut(s)	1085
DseDI	GACNNNNNNGTC	1 cut(s)	1085
EaeI	YGGCCR	3 cut(s)	750, 1059, 2041
EagI	CGGCCG	1 cut(s)	1059
Eam1104I	CTCTTC	2 cut(s)	1308, 1320
EarI	CTCTTC	2 cut(s)	1308, 1320
EciI	GGCGGA	3 cut(s)	247, 882, 1170
EclXI	CGGCCG	1 cut(s)	1059
Eco130I	CCWWGG	5 cut(s)	247, 615, 825, 1013, 1925
Eco147I	AGGCCT	1 cut(s)	1697
Eco24I	GRGCYC	1 cut(s)	984
Eco31I	GGTCTC	3 cut(s)	961, 1194, 1716
Eco32I	GATATC	1 cut(s)	1876
Eco47I	GGWCC	6 cut(s)	108, 488, 639, 829, 1502, 1922
Eco52I	CGGCCG	1 cut(s)	1059
Eco72I	CACGTG	1 cut(s)	124
Eco88I	CYCGRG	3 cut(s)	455, 463, 478
Eco91I	GGTNACC	1 cut(s)	101
EcoO109I	RGGNCCY	2 cut(s)	488, 639
EcoO65I	GGTNACC	1 cut(s)	101
EcoRI	GAATTC	1 cut(s)	1507
EcoRII	CCWGG	6 cut(s)	276, 635, 1549, 1996, 2038, 2043
EcoRV	GATATC	1 cut(s)	1876
EcoT14I	CCWWGG	5 cut(s)	247, 615, 825, 1013, 1925
EcoT38I	GRGCYC	1 cut(s)	984
EgeI	GGCGCC	1 cut(s)	571
EheI	GGCGCC	1 cut(s)	571
ErhI	CCWWGG	5 cut(s)	247, 615, 825, 1013, 1925
Esp3I	CGTCTC	2 cut(s)	494, 1609
FalI	AAGNNNNNCTT	2 cut(s)	1317, 1349
FaqI	GGGAC	7 cut(s)	280, 305, 474, 479, 625, 1337, 1427
FauI	CCCGC	4 cut(s)	310, 359, 683, 2122
FauNDI	CATATG	1 cut(s)	2330
FbaI	TGATCA	1 cut(s)	1384
FblI	GTMKAC	1 cut(s)	1149
FokI	GGATG	4 cut(s)	167, 1633, 1976, 2132
FriOI	GRGCYC	1 cut(s)	984
FspBI	CTAG	5 cut(s)	696, 1124, 1565, 1926, 1977
GlaI	GCGC	9 cut(s)	241, 288, 335, 461, 571, 889, 934, 988, 1267
GsaI	CCCAGC	4 cut(s)	943, 1358, 1572, 1962
GsuI	CTGGAG	2 cut(s)	275, 1572
HaeII	RGCGCY	4 cut(s)	463, 573, 891, 1269
HgaI	GACGC	1 cut(s)	1816
HhaI	GCGC	9 cut(s)	242, 289, 336, 462, 572, 890, 935, 989, 1268
Hin1I	GRCGYC	3 cut(s)	420, 570, 1808
Hin6I	GCGC	9 cut(s)	240, 287, 334, 460, 570, 888, 933, 987, 1266
HinP1I	GCGC	9 cut(s)	240, 287, 334, 460, 570, 888, 933, 987, 1266
HindIII	AAGCTT	1 cut(s)	1274
HphI	GGTGA	8 cut(s)	95, 200, 1334, 1337, 1750, 2012, 2065, 2264
Hpy166II	GTNNAC	8 cut(s)	121, 174, 853, 993, 1129, 1150, 1558, 1575
Hpy188III	TCNNGA	7 cut(s)	437, 905, 1043, 1520, 1614, 1703, 1945
Hpy8I	GTNNAC	8 cut(s)	121, 174, 853, 993, 1129, 1150, 1558, 1575
Hpy99I	CGWCG	7 cut(s)	101, 320, 422, 848, 875, 1082, 1810
HpyAV	CCTTC	5 cut(s)	34, 121, 210, 650, 1470
HpyCH4III	ACNGT	6 cut(s)	101, 1027, 1200, 1322, 1450, 1985
HpyCH4IV	ACGT	3 cut(s)	123, 420, 503
HpyF3I	CTNAG	1 cut(s)	2187
HpySE526I	ACGT	3 cut(s)	123, 420, 503
Hsp92I	GRCGYC	3 cut(s)	420, 570, 1808
HspAI	GCGC	9 cut(s)	240, 287, 334, 460, 570, 888, 933, 987, 1266
KasI	GGCGCC	1 cut(s)	569
KflI	GGGWCCC	1 cut(s)	488
Kpn2I	TCCGGA	2 cut(s)	1519, 1702
KroI	GCCGGC	3 cut(s)	142, 527, 686
KroNI	GCCGGC	3 cut(s)	144, 529, 688
Ksp22I	TGATCA	1 cut(s)	1384
Kzo9I	GATC	9 cut(s)	561, 901, 1218, 1231, 1287, 1384, 1431, 1783, 1837
LguI	GCTCTTC	1 cut(s)	1320
Lsp1109I	GCAGC	5 cut(s)	782, 1275, 1366, 1691, 1705
LweI	GCATC	3 cut(s)	2086, 2110, 2278
MaeI	CTAG	5 cut(s)	696, 1124, 1565, 1926, 1977
MaeII	ACGT	3 cut(s)	123, 420, 503
MaeIII	GTNAC	8 cut(s)	70, 101, 520, 551, 1241, 1738, 2071, 2200
MalI	GATC	9 cut(s)	563, 903, 1220, 1233, 1289, 1386, 1433, 1785, 1839
MbiI	CCGCTC	1 cut(s)	189
MboI	GATC	9 cut(s)	561, 901, 1218, 1231, 1287, 1384, 1431, 1783, 1837
MfeI	CAATTG	1 cut(s)	837
MflI	RGATCY	1 cut(s)	1783
MhlI	GDGCHC	3 cut(s)	984, 1852, 1910
MlsI	TGGCCA	2 cut(s)	752, 2043
MluCI	AATT	6 cut(s)	837, 1436, 1507, 1635, 1762, 2008
MluNI	TGGCCA	2 cut(s)	752, 2043
Mly113I	GGCGCC	1 cut(s)	570
MlyI	GAGTC	9 cut(s)	470, 632, 858, 902, 1095, 1260, 1510, 2179, 2293
MmeI	TCCRAC	7 cut(s)	120, 429, 651, 853, 1009, 1445, 2200
Mox20I	TGGCCA	2 cut(s)	752, 2043
MreI	CGCCGGCG	2 cut(s)	527, 686
MroI	TCCGGA	2 cut(s)	1519, 1702
MroNI	GCCGGC	3 cut(s)	142, 527, 686
MroXI	GAANNNNTTC	1 cut(s)	1329
MscI	TGGCCA	2 cut(s)	752, 2043
MseI	TTAA	4 cut(s)	1272, 1725, 1854, 2034
MslI	CAYNNNNRTG	4 cut(s)	1649, 1668, 1903, 2274
Msp20I	TGGCCA	2 cut(s)	752, 2043
MspA1I	CMGCKG	2 cut(s)	168, 882
MunI	CAATTG	1 cut(s)	837
Mva1269I	GAATGC	1 cut(s)	1898
MvaI	CCWGG	6 cut(s)	278, 637, 1551, 1998, 2040, 2045
MvnI	CGCG	8 cut(s)	240, 287, 334, 413, 648, 906, 935, 989
NaeI	GCCGGC	3 cut(s)	144, 529, 688
NarI	GGCGCC	1 cut(s)	570
NciI	CCSGG	8 cut(s)	445, 497, 979, 984, 1058, 1768, 1828, 1860
NcoI	CCATGG	3 cut(s)	247, 615, 825
NdeI	CATATG	1 cut(s)	2330
NdeII	GATC	9 cut(s)	561, 901, 1218, 1231, 1287, 1384, 1431, 1783, 1837
NgoMIV	GCCGGC	3 cut(s)	142, 527, 686
NlaIV	GGNNCC	9 cut(s)	489, 490, 571, 641, 667, 877, 982, 1503, 1825
NmeAIII	GCCGAG	3 cut(s)	348, 938, 2178
NmuCI	GTSAC	4 cut(s)	101, 520, 1738, 2071
NruI	TCGCGA	1 cut(s)	906
NspI	RCATGY	3 cut(s)	331, 1667, 1835
NspV	TTCGAA	1 cut(s)	1690
PaqCI	CACCTGC	1 cut(s)	1271
PceI	AGGCCT	1 cut(s)	1697
PciI	ACATGT	1 cut(s)	1663
PciSI	GCTCTTC	1 cut(s)	1320
PcsI	WCGNNNNNNNCGW	6 cut(s)	375, 417, 435, 627, 732, 1074
PctI	GAATGC	1 cut(s)	1898
PdiI	GCCGGC	3 cut(s)	144, 529, 688
PdmI	GAANNNNTTC	1 cut(s)	1329
PfeI	GAWTC	8 cut(s)	596, 632, 765, 806, 1018, 1340, 1610, 1802
PflFI	GACNNNGTC	2 cut(s)	419, 848
PflMI	CCANNNNNTGG	1 cut(s)	2050
PfoI	TCCNGGA	3 cut(s)	495, 1549, 1766
Ple19I	CGATCG	1 cut(s)	904
PleI	GAGTC	9 cut(s)	470, 631, 857, 902, 1094, 1259, 1510, 2179, 2292
PluTI	GGCGCC	1 cut(s)	573
PmaCI	CACGTG	1 cut(s)	124
PmlI	CACGTG	1 cut(s)	124
PpsI	GAGTC	9 cut(s)	470, 631, 857, 902, 1094, 1259, 1510, 2179, 2292
Ppu21I	YACGTR	1 cut(s)	124
PpuMI	RGGWCCY	2 cut(s)	488, 639
PscI	ACATGT	1 cut(s)	1663
PshAI	GACNNNNGTC	1 cut(s)	480
Psp5II	RGGWCCY	2 cut(s)	488, 639
Psp6I	CCWGG	6 cut(s)	276, 635, 1549, 1996, 2038, 2043
PspCI	CACGTG	1 cut(s)	124
PspEI	GGTNACC	1 cut(s)	101
PspFI	CCCAGC	4 cut(s)	939, 1354, 1568, 1958
PspGI	CCWGG	6 cut(s)	276, 635, 1549, 1996, 2038, 2043
PspN4I	GGNNCC	9 cut(s)	489, 490, 571, 641, 667, 877, 982, 1503, 1825
PspOMI	GGGCCC	1 cut(s)	980
PspPPI	RGGWCCY	2 cut(s)	488, 639
PstI	CTGCAG	1 cut(s)	970
PstNI	CAGNNNCTG	1 cut(s)	2294
PsuI	RGATCY	1 cut(s)	1783
PsyI	GACNNNGTC	2 cut(s)	419, 848
PvuI	CGATCG	1 cut(s)	904
RruI	TCGCGA	1 cut(s)	906
RsaI	GTAC	6 cut(s)	173, 1109, 1175, 1209, 2060, 2311
RsaNI	GTAC	6 cut(s)	172, 1108, 1174, 1208, 2059, 2310
RseI	CAYNNNNRTG	4 cut(s)	1649, 1668, 1903, 2274
SapI	GCTCTTC	1 cut(s)	1320
SaqAI	TTAA	4 cut(s)	1272, 1725, 1854, 2034
Sau3AI	GATC	9 cut(s)	561, 901, 1218, 1231, 1287, 1384, 1431, 1783, 1837
ScaI	AGTACT	1 cut(s)	2311
SchI	GAGTC	9 cut(s)	470, 632, 858, 902, 1095, 1260, 1510, 2179, 2293
SduI	GDGCHC	3 cut(s)	984, 1852, 1910
SfaNI	GCATC	3 cut(s)	2086, 2110, 2278
SfcI	CTRYAG	1 cut(s)	966
SfoI	GGCGCC	1 cut(s)	571
SfuI	TTCGAA	1 cut(s)	1690
SgrAI	CRCCGGYG	2 cut(s)	527, 686
SinI	GGWCC	6 cut(s)	108, 488, 639, 829, 1502, 1922
SmiMI	CAYNNNNRTG	4 cut(s)	1649, 1668, 1903, 2274
Sse9I	AATT	6 cut(s)	837, 1436, 1507, 1635, 1762, 2008
SseBI	AGGCCT	1 cut(s)	1697
SspDI	GGCGCC	1 cut(s)	569
SspI	AATATT	1 cut(s)	134
SspMI	CTAG	5 cut(s)	696, 1124, 1565, 1926, 1977
StuI	AGGCCT	1 cut(s)	1697
StyI	CCWWGG	5 cut(s)	247, 615, 825, 1013, 1925
TaaI	ACNGT	6 cut(s)	101, 1027, 1200, 1322, 1450, 1985
TaiI	ACGT	3 cut(s)	126, 423, 506
TaqI	TCGA	9 cut(s)	128, 438, 804, 1493, 1613, 1690, 1805, 1910, 2249
TasI	AATT	6 cut(s)	837, 1436, 1507, 1635, 1762, 2008
TatI	WGTACW	4 cut(s)	1107, 1207, 2058, 2309
TauI	GCSGC	7 cut(s)	168, 334, 824, 885, 888, 938, 1167
TfiI	GAWTC	8 cut(s)	596, 632, 765, 806, 1018, 1340, 1610, 1802
Tru1I	TTAA	4 cut(s)	1272, 1725, 1854, 2034
Tru9I	TTAA	4 cut(s)	1272, 1725, 1854, 2034
TscAI	CASTG	4 cut(s)	1675, 2031, 2149, 2176
TseFI	GTSAC	4 cut(s)	101, 520, 1738, 2071
TseI	GCWGC	5 cut(s)	770, 1263, 1379, 1679, 1718
Tsp45I	GTSAC	4 cut(s)	101, 520, 1738, 2071
TspDTI	ATGAA	6 cut(s)	6, 16, 56, 103, 1808, 1891
TspGWI	ACGGA	4 cut(s)	304, 859, 861, 2004
TspRI	CASTG	4 cut(s)	1675, 2031, 2149, 2176
Tth111I	GACNNNGTC	2 cut(s)	419, 848
Van91I	CCANNNNNTGG	1 cut(s)	2050
VpaK11BI	GGWCC	6 cut(s)	108, 488, 639, 829, 1502, 1922
XapI	RAATTY	2 cut(s)	1436, 1507
XceI	RCATGY	3 cut(s)	331, 1667, 1835
XmaJI	CCTAGG	1 cut(s)	1925
XmiI	GTMKAC	1 cut(s)	1149
XmnI	GAANNNNTTC	1 cut(s)	1329
XspI	CTAG	5 cut(s)	696, 1124, 1565, 1926, 1977
ZraI	GACGTC	1 cut(s)	421
ZrmI	AGTACT	1 cut(s)	2311

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.